Citrus Sinensis ID: 043891

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Protein Sequence
ALNTSAVTASLDNPASQLKNETSRPSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKGVHN
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcccccEEEEEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cccccEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
ALNTSAVTasldnpasqlknetsrpsrvIYFRIDVALRILLFVFSFVAILLIVTskqtnlfpvpgttfsvkipakftyfPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLkgnshagwnkqanagyDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKGVHN
Flexible Loop (DISEMBL)
alntsavtasldnpasqlknetsrpsrVIYFRIDVALRILLFVFSFVAILLIVTskqtnlfpvPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKGVHN
Low Complexity Region (SEG)
ALNTSAVTASLDNPASQLKNETSRPSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTirklasrkrlllliaFLDTLMlgvvasaigaalavayiglKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKGVHN
Disordered region (IsUnstruct)
**************************RVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYK****
Disordered Region (DISOPRED)
********************************IDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKG***
Disordered Region (DISEMBL)
**********************SRPSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKGVHN
Disordered Region (DISPRO)
************************PSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKGV**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
ALNTSAVTASLDNPASQLKNETSRPSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKGVHN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	200	2.2.26 [Sep-21-2011]
B9HMP5	196	CASP-like protein POPTRDR	yes	no	0.945	0.964	0.489	2e-37
C6SVQ5	193	CASP-like protein 7 OS=Gl	yes	no	0.93	0.963	0.458	3e-34
C6SXZ3	193	CASP-like protein 8 OS=Gl	no	no	0.89	0.922	0.453	5e-32
B9RT03	201	CASP-like protein RCOM_06	N/A	no	0.955	0.950	0.482	2e-31
D2KQI6	194	CASP-like protein Ni6 OS=	N/A	no	0.84	0.865	0.462	1e-29
D7MAF7	194	CASP-like protein ARALYDR	N/A	no	0.815	0.840	0.461	6e-29
Q9FE29	193	CASP-like protein At4g156	yes	no	0.715	0.740	0.462	1e-27
Q9SQU2	199	CASP-like protein At3g063	no	no	0.81	0.814	0.413	3e-27
Q6YT98	207	CASP-like protein Os07g04	yes	no	0.81	0.782	0.421	3e-27
Q1EPG6	191	CASP-like protein MA4_106	N/A	no	0.67	0.701	0.465	6e-27

>sp|B9HMP5|CSPLD_POPTR CASP-like protein POPTRDRAFT_820933 OS=Populus trichocarpa GN=POPTRDRAFT_820933 PE=3 SV=1

 Score =  155 bits (391), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/194 (48%), Positives = 124/194 (63%), Gaps = 5/194 (2%)

Query: 9   ASLDNPASQ-LKNETS---RPSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVP 64
           AS D P  + +K+E +    P R  Y  + VALR LLF  S  A++++VT+KQT + PVP
Sbjct: 2   ASTDKPDRESIKSEEAPAAHPRRSNYSSVHVALRFLLFAASVTAVVVMVTAKQTKIVPVP 61

Query: 65  GTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLD 124
           G   SV + AKF+  PAFIY   AL VA LY  +T L ++S + K A   R LL  A LD
Sbjct: 62  GFPISVPLEAKFSDSPAFIYFISALSVAGLYGILTTLAAISIVLKPAYATRFLLHFALLD 121

Query: 125 TLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLV 184
            LMLG+VASA GAA  VAY+GLKGNSH  W K  N  YDKF +H  ++IA+++FA   LV
Sbjct: 122 VLMLGIVASATGAAGGVAYVGLKGNSHVRWGKVCNV-YDKFCQHVGSSIAVALFASVLLV 180

Query: 185 TLTMHSTYSLYKGV 198
            LTM S +S+Y+ +
Sbjct: 181 LLTMLSVFSIYRKI 194

Populus trichocarpa (taxid: 3694)

>sp|C6SVQ5|CSPL7_SOYBN CASP-like protein 7 OS=Glycine max PE=2 SV=1

 Score =  144 bits (363), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/194 (45%), Positives = 112/194 (57%), Gaps = 8/194 (4%)

Query: 9   ASLDNPASQLKNETSR---PSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPG 65
           AS D P    +  TS    P+ V YF+ DV LR LLF  S VA+++IVT+ QT +  VP 
Sbjct: 2   ASTDKPGGDPEYRTSSTPAPAGVDYFKFDVILRFLLFAASLVAVVVIVTANQTEVIRVPQ 61

Query: 66  TTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDT 125
               V  PAKF Y PAF+Y   AL V  LYS IT L SL    K A + +LLL     D 
Sbjct: 62  ---PVPWPAKFRYSPAFVYFVAALSVTGLYSIITTLASLLASNKPALKTKLLLYFILWDA 118

Query: 126 LMLGVVASAIGAALAVAYIGLKGNSH-AGWNKQANAGYDKFIKHTATAIALSIFAVTDLV 184
           L+LG++ASA G A  VAY+GLKGN H  GWNK  +  YDKF +H   +IA+++F     V
Sbjct: 119 LILGIIASATGTAGGVAYLGLKGNRHVVGWNKICHV-YDKFCRHVGASIAVALFGSVVTV 177

Query: 185 TLTMHSTYSLYKGV 198
            L   S YS++  V
Sbjct: 178 LLIWLSAYSIHSRV 191

Glycine max (taxid: 3847)

>sp|C6SXZ3|CSPL8_SOYBN CASP-like protein 8 OS=Glycine max PE=2 SV=1

 Score =  137 bits (345), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/183 (45%), Positives = 107/183 (58%), Gaps = 5/183 (2%)

Query: 17  QLKNETSRPSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKF 76
           +  + T  P+ V YF+ DV LR +LF  S VA+++IVT  QT +  VP     V  PAKF
Sbjct: 13  RTSSSTPAPAGVDYFKFDVILRFVLFAASLVAVVVIVTGNQTEVILVPQ---PVPWPAKF 69

Query: 77  TYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIG 136
            Y PAF+Y   AL V  LYS IT L SL    K A + +LL      D L+LG++ASA G
Sbjct: 70  RYTPAFVYFVAALSVTGLYSIITTLASLFASNKPALKTKLLPYFILWDALILGIIASATG 129

Query: 137 AALAVAYIGLKGNSH-AGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLY 195
            A  VAY+GLKGNSH  GWNK  +  YDKF +H   +IA+++F     V L   S YS++
Sbjct: 130 TAGGVAYLGLKGNSHVVGWNKICHV-YDKFCRHVGASIAVALFGSIVTVLLIWLSAYSIH 188

Query: 196 KGV 198
             V
Sbjct: 189 SRV 191

Glycine max (taxid: 3847)

>sp|B9RT03|CSPL5_RICCO CASP-like protein RCOM_0679870 OS=Ricinus communis GN=RCOM_0679870 PE=2 SV=1

 Score =  135 bits (339), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/199 (48%), Positives = 116/199 (58%), Gaps = 8/199 (4%)

Query: 9   ASLDNPASQ-LKNETSRPS-----RVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFP 62
           AS D P  + +K+E  +P      R  YF +DV LR+ LF  +  AI+++ T+KQT L P
Sbjct: 2   ASTDKPDPEAIKSEVPQPPPPAPLRRDYFAVDVGLRVFLFATTLTAIVVMSTAKQTELAP 61

Query: 63  VPGTT-FSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIA 121
           VPG     V + AKF + PAFIY   AL VACLYS IT L SL  I K     + L   A
Sbjct: 62  VPGVPGLRVPVEAKFNHSPAFIYFVAALSVACLYSIITTLASLGVIAKPIYATKFLFYYA 121

Query: 122 FLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVT 181
             D LMLG+VA+A GAA  VAYIGLKGNSH  W K  N  YD F KH  +A+A+S+ A  
Sbjct: 122 LWDVLMLGIVAAATGAAGGVAYIGLKGNSHTRWTKICNV-YDTFCKHVGSALAISLAASV 180

Query: 182 DLVTLTMHSTYSLYKGVHN 200
            LV L M S  SLY  V  
Sbjct: 181 VLVLLIMLSVCSLYSRVRR 199

Ricinus communis (taxid: 3988)

>sp|D2KQI6|CSPL1_BETVM CASP-like protein Ni6 OS=Beta vulgaris subsp. maritima GN=Ni6 PE=2 SV=1

 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/173 (46%), Positives = 104/173 (60%), Gaps = 5/173 (2%)

Query: 25  PSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVP-GTTFSVKIPAKFTYFPAFI 83
           P+   Y  +DV LR+LL   S  +++L+VTSKQT +   P G+  +    AKF   PAFI
Sbjct: 21  PTDNKYRVVDVILRVLLLAASIASVVLMVTSKQTEIIVSPFGSRPNA---AKFQNSPAFI 77

Query: 84  YLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAY 143
           YL  AL VA LYS ITAL SLS +RK     +L  ++   D L+LG+VA+A G A  V Y
Sbjct: 78  YLVAALSVAGLYSIITALVSLSYMRKPIVPPKLFWILLIHDVLLLGIVAAATGTAGGVGY 137

Query: 144 IGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYK 196
           IGLKGN+H  W K  N  YDKF +H   +I +S+FA   LV L   +  SLY+
Sbjct: 138 IGLKGNTHVRWGKIRNV-YDKFCRHVGASIIVSLFAAAVLVLLVFVNANSLYR 189

Beta vulgaris subsp. maritima (taxid: 350892)

>sp|D7MAF7|CSPL6_ARALL CASP-like protein ARALYDRAFT_915236 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915236 PE=3 SV=1

 Score =  127 bits (319), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 105/167 (62%), Gaps = 4/167 (2%)

Query: 34  DVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPA-KFTYFPAFIYLFVALLVA 92
            V LR +LF  +  +I+++VTSKQT    +PGT   ++IPA KFT  PA IY  VAL VA
Sbjct: 31  QVVLRFVLFAATLTSIVVMVTSKQTKNIFIPGT--PIRIPAAKFTNSPALIYFVVALSVA 88

Query: 93  CLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHA 152
           C YS ++   ++S  +K +    LLL +A +D +M+G+VASA GA   VAY+GLKGN   
Sbjct: 89  CFYSIVSTFVTVSAFKKHSCSAILLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEV 148

Query: 153 GWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKGVH 199
            W K  N  YDKF +H   AIA+S+FA   L+ L++ S  SLYK + 
Sbjct: 149 RWGKICNI-YDKFCRHVGGAIAVSLFASVILLLLSIISVLSLYKKIR 194

Arabidopsis lyrata subsp. lyrata (taxid: 81972)

>sp|Q9FE29|CSPLM_ARATH CASP-like protein At4g15610 OS=Arabidopsis thaliana GN=At4g15610 PE=2 SV=1

 Score =  122 bits (307), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 94/147 (63%), Gaps = 4/147 (2%)

Query: 34  DVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPA-KFTYFPAFIYLFVALLVA 92
            V LR +LF  +  +I+++VTSKQT    +PGT   ++IPA +FT  PA IY  VAL VA
Sbjct: 30  QVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGT--PIRIPAAEFTNSPALIYFVVALSVA 87

Query: 93  CLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHA 152
           C YS ++   ++S  +K +    LLL +A +D +M+G+VASA GA   VAY+GLKGN   
Sbjct: 88  CFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEV 147

Query: 153 GWNKQANAGYDKFIKHTATAIALSIFA 179
            W K  +  YDKF +H   AIA+S+FA
Sbjct: 148 RWGKICHI-YDKFCRHVGGAIAVSLFA 173

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SQU2|CSPLD_ARATH CASP-like protein At3g06390 OS=Arabidopsis thaliana GN=At3g06390 PE=2 SV=1

 Score =  121 bits (304), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 12/174 (6%)

Query: 9   ASLDNPASQL-KNE------TSRPSRVIYF----RIDVALRILLFVFSFVAILLIVTSKQ 57
           AS +NP  +  K+E      T  PS    F    +ID+  R+LLF  +  A++++VTS Q
Sbjct: 2   ASTENPDPETGKSEPIPASATPPPSSAASFLDCRKIDIITRVLLFSATLTALIVMVTSDQ 61

Query: 58  TNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLL 117
           T +  +PG +    + A+F   PAFIY  VAL+VA  Y+ I+ L S+S + K     +  
Sbjct: 62  TEMTQLPGVSSPAPVSAEFNDSPAFIYFVVALVVASFYALISTLVSISLLLKPEFTAQFS 121

Query: 118 LLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTAT 171
           + +A LD +MLG++ASA G A  VAYI LKGN   GWNK  N  YDKF ++ AT
Sbjct: 122 IYLASLDMVMLGILASATGTAGGVAYIALKGNEEVGWNKICNV-YDKFCRYIAT 174

Arabidopsis thaliana (taxid: 3702)

>sp|Q6YT98|CSPL7_ORYSJ CASP-like protein Os07g0442900 OS=Oryza sativa subsp. japonica GN=Os07g0442900 PE=2 SV=1

 Score =  121 bits (304), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 97/166 (58%), Gaps = 4/166 (2%)

Query: 34  DVALRILLFVFSFVAILLIVTSKQTNLFPV---PGTTFSVKIPAKFTYFPAFIYLFVALL 90
           ++ALR LLF  S  A++++VT+KQT + P    P       +PAK+T+ PA IYL  AL 
Sbjct: 40  NLALRALLFAVSLSALVVLVTAKQTVMVPFVIRPPQFILAPVPAKYTHSPALIYLLAALC 99

Query: 91  VACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNS 150
             C YS ITA++S+  +   A   + L  +  LD     V+ASA G A AVA++GLKGNS
Sbjct: 100 ATCFYSLITAISSVRLLSSSACSAKTLFYLILLDVFYAAVMASATGTAGAVAWVGLKGNS 159

Query: 151 HAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYK 196
           H  WNK  N  Y KF +H  ++  L++ A   LV L   + YSLY+
Sbjct: 160 HTRWNKICNV-YGKFCRHIGSSTFLALIAAIVLVLLAFLNAYSLYR 204

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q1EPG6|CSPL2_MUSAC CASP-like protein MA4_106O17.52 OS=Musa acuminata GN=MA4_106O17.52 PE=3 SV=2

 Score =  120 bits (301), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 67/144 (46%), Positives = 86/144 (59%), Gaps = 10/144 (6%)

Query: 31  FRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPA------KFTYFPAFIY 84
           F +D  LR+LL   +  A++++VTSKQT   P   T+     PA      KF + PAFIY
Sbjct: 21  FGVDFGLRLLLLASAVSALVVLVTSKQTESIP---TSLPPPFPAFISRDAKFQHSPAFIY 77

Query: 85  LFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYI 144
           L VAL V C YS IT + S + I   +S  R+L  +   D +M GV+ASA G A +VAY+
Sbjct: 78  LLVALSVTCFYSIITMVASFAAITSPSSSPRMLFHLVLSDAVMAGVMASAAGTAGSVAYL 137

Query: 145 GLKGNSHAGWNKQANAGYDKFIKH 168
           GLKGNSH  WNK  N  YDKF +H
Sbjct: 138 GLKGNSHVNWNKVCNV-YDKFCRH 160

Musa acuminata (taxid: 4641)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
224102631	196	predicted protein [Populus trichocarpa]	0.945	0.964	0.489	1e-35
351726435	193	CASP-like protein 7 [Glycine max] gi|288	0.93	0.963	0.458	2e-32
388503428	190	unknown [Lotus japonicus]	0.89	0.936	0.442	2e-31
351721899	193	CASP-like protein 8 [Glycine max] gi|288	0.89	0.922	0.453	2e-30
255551653	201	conserved hypothetical protein [Ricinus	0.955	0.950	0.482	1e-29
356549065	189	PREDICTED: CASP-like protein 7-like [Gly	0.905	0.957	0.425	2e-28
341958524	194	RecName: Full=CASP-like protein Ni6 gi|2	0.84	0.865	0.462	7e-28
297804684	194	integral membrane family protein [Arabid	0.815	0.840	0.461	3e-27
18414489	193	uncharacterized protein [Arabidopsis tha	0.715	0.740	0.462	6e-26
125558160	209	hypothetical protein OsI_25828 [Oryza sa	0.81	0.775	0.421	1e-25

>gi|224102631|ref|XP_002312755.1| predicted protein [Populus trichocarpa] gi|341958560|sp|B9HMP5.1|CSPLD_POPTR RecName: Full=CASP-like protein POPTRDRAFT_820933 gi|222852575|gb|EEE90122.1| predicted protein [Populus trichocarpa]

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/194 (48%), Positives = 124/194 (63%), Gaps = 5/194 (2%)

Query: 9   ASLDNPASQ-LKNETS---RPSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVP 64
           AS D P  + +K+E +    P R  Y  + VALR LLF  S  A++++VT+KQT + PVP
Sbjct: 2   ASTDKPDRESIKSEEAPAAHPRRSNYSSVHVALRFLLFAASVTAVVVMVTAKQTKIVPVP 61

Query: 65  GTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLD 124
           G   SV + AKF+  PAFIY   AL VA LY  +T L ++S + K A   R LL  A LD
Sbjct: 62  GFPISVPLEAKFSDSPAFIYFISALSVAGLYGILTTLAAISIVLKPAYATRFLLHFALLD 121

Query: 125 TLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLV 184
            LMLG+VASA GAA  VAY+GLKGNSH  W K  N  YDKF +H  ++IA+++FA   LV
Sbjct: 122 VLMLGIVASATGAAGGVAYVGLKGNSHVRWGKVCNV-YDKFCQHVGSSIAVALFASVLLV 180

Query: 185 TLTMHSTYSLYKGV 198
            LTM S +S+Y+ +
Sbjct: 181 LLTMLSVFSIYRKI 194

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351726435|ref|NP_001238662.1| CASP-like protein 7 [Glycine max] gi|288559198|sp|C6SVQ5.1|CSPL7_SOYBN RecName: Full=CASP-like protein 7 gi|255625967|gb|ACU13328.1| unknown [Glycine max]

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/194 (45%), Positives = 112/194 (57%), Gaps = 8/194 (4%)

Query: 9   ASLDNPASQLKNETSR---PSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPG 65
           AS D P    +  TS    P+ V YF+ DV LR LLF  S VA+++IVT+ QT +  VP 
Sbjct: 2   ASTDKPGGDPEYRTSSTPAPAGVDYFKFDVILRFLLFAASLVAVVVIVTANQTEVIRVPQ 61

Query: 66  TTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDT 125
               V  PAKF Y PAF+Y   AL V  LYS IT L SL    K A + +LLL     D 
Sbjct: 62  ---PVPWPAKFRYSPAFVYFVAALSVTGLYSIITTLASLLASNKPALKTKLLLYFILWDA 118

Query: 126 LMLGVVASAIGAALAVAYIGLKGNSH-AGWNKQANAGYDKFIKHTATAIALSIFAVTDLV 184
           L+LG++ASA G A  VAY+GLKGN H  GWNK  +  YDKF +H   +IA+++F     V
Sbjct: 119 LILGIIASATGTAGGVAYLGLKGNRHVVGWNKICHV-YDKFCRHVGASIAVALFGSVVTV 177

Query: 185 TLTMHSTYSLYKGV 198
            L   S YS++  V
Sbjct: 178 LLIWLSAYSIHSRV 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388503428|gb|AFK39780.1| unknown [Lotus japonicus]

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/190 (44%), Positives = 112/190 (58%), Gaps = 12/190 (6%)

Query: 12  DNPASQLKNETSRPSR---VIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTF 68
           ++P  +L + T  P+    V YF  D+ LR LLF  S VA++++VTS QT   P+P    
Sbjct: 8   EDPEHRL-SSTPIPAPAAGVDYFHFDLILRFLLFASSLVAVVVMVTSNQTEYVPLPR--- 63

Query: 69  SVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLML 128
               PAKF Y PAFIY   A  V+ LYS +TAL SLS IRK A + + LL   F D L+L
Sbjct: 64  ----PAKFRYSPAFIYFVAAFSVSGLYSILTALASLSVIRKPALKTKFLLYFLFWDALIL 119

Query: 129 GVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTM 188
           G++ASA G A  VAY+GLKGN+H GW+K  N  YDK+ +H   +I + +      V L  
Sbjct: 120 GILASATGTAGGVAYVGLKGNNHVGWHKICNV-YDKYCRHVGGSIGVGLVGSIVSVLLVW 178

Query: 189 HSTYSLYKGV 198
            S +SL+  V
Sbjct: 179 LSAFSLHSRV 188

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351721899|ref|NP_001237481.1| CASP-like protein 8 [Glycine max] gi|288559102|sp|C6SXZ3.1|CSPL8_SOYBN RecName: Full=CASP-like protein 8 gi|255627543|gb|ACU14116.1| unknown [Glycine max]

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/183 (45%), Positives = 107/183 (58%), Gaps = 5/183 (2%)

Query: 17  QLKNETSRPSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKF 76
           +  + T  P+ V YF+ DV LR +LF  S VA+++IVT  QT +  VP     V  PAKF
Sbjct: 13  RTSSSTPAPAGVDYFKFDVILRFVLFAASLVAVVVIVTGNQTEVILVPQ---PVPWPAKF 69

Query: 77  TYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIG 136
            Y PAF+Y   AL V  LYS IT L SL    K A + +LL      D L+LG++ASA G
Sbjct: 70  RYTPAFVYFVAALSVTGLYSIITTLASLFASNKPALKTKLLPYFILWDALILGIIASATG 129

Query: 137 AALAVAYIGLKGNSH-AGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLY 195
            A  VAY+GLKGNSH  GWNK  +  YDKF +H   +IA+++F     V L   S YS++
Sbjct: 130 TAGGVAYLGLKGNSHVVGWNKICHV-YDKFCRHVGASIAVALFGSIVTVLLIWLSAYSIH 188

Query: 196 KGV 198
             V
Sbjct: 189 SRV 191

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551653|ref|XP_002516872.1| conserved hypothetical protein [Ricinus communis] gi|238055376|sp|B9RT03.1|CSPL5_RICCO RecName: Full=CASP-like protein RCOM_0679870 gi|223543960|gb|EEF45486.1| conserved hypothetical protein [Ricinus communis]

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/199 (48%), Positives = 116/199 (58%), Gaps = 8/199 (4%)

Query: 9   ASLDNPASQ-LKNETSRPS-----RVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFP 62
           AS D P  + +K+E  +P      R  YF +DV LR+ LF  +  AI+++ T+KQT L P
Sbjct: 2   ASTDKPDPEAIKSEVPQPPPPAPLRRDYFAVDVGLRVFLFATTLTAIVVMSTAKQTELAP 61

Query: 63  VPGTT-FSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIA 121
           VPG     V + AKF + PAFIY   AL VACLYS IT L SL  I K     + L   A
Sbjct: 62  VPGVPGLRVPVEAKFNHSPAFIYFVAALSVACLYSIITTLASLGVIAKPIYATKFLFYYA 121

Query: 122 FLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVT 181
             D LMLG+VA+A GAA  VAYIGLKGNSH  W K  N  YD F KH  +A+A+S+ A  
Sbjct: 122 LWDVLMLGIVAAATGAAGGVAYIGLKGNSHTRWTKICNV-YDTFCKHVGSALAISLAASV 180

Query: 182 DLVTLTMHSTYSLYKGVHN 200
            LV L M S  SLY  V  
Sbjct: 181 VLVLLIMLSVCSLYSRVRR 199

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549065|ref|XP_003542918.1| PREDICTED: CASP-like protein 7-like [Glycine max]

 Score =  130 bits (328), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/188 (42%), Positives = 111/188 (59%), Gaps = 7/188 (3%)

Query: 13  NPASQLKNETSRPSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTN--LFPVPGTTFSV 70
           +P ++       P+ V Y ++DV LR LL   S VA+ +IV+S QT   LF        +
Sbjct: 5   DPENKSPTLPLPPAEVDYSKVDVILRFLLLAASVVALAVIVSSDQTEQVLF----QDVLL 60

Query: 71  KIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGV 130
             PAKF Y PAF+Y   A  V+ LY+ ++AL S+S I+K   + + LL   F D L+LG+
Sbjct: 61  PQPAKFKYSPAFVYFVAAFSVSGLYALVSALASISVIQKPGFKLKFLLHFIFWDALILGI 120

Query: 131 VASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHS 190
            ASA GAA +VAYIGLKGNSH GW K  N  YDKF +H A +IA+++F     V L   S
Sbjct: 121 TASATGAAGSVAYIGLKGNSHVGWIKVCNI-YDKFCRHLAGSIAVALFGSIVTVLLIWLS 179

Query: 191 TYSLYKGV 198
            ++++  V
Sbjct: 180 AFTIHSRV 187

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|341958524|sp|D2KQI6.1|CSPL1_BETMR RecName: Full=CASP-like protein Ni6 gi|281494397|gb|ADA71986.1| Ni6 protein [Beta vulgaris subsp. maritima]

 Score =  129 bits (324), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/173 (46%), Positives = 104/173 (60%), Gaps = 5/173 (2%)

Query: 25  PSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVP-GTTFSVKIPAKFTYFPAFI 83
           P+   Y  +DV LR+LL   S  +++L+VTSKQT +   P G+  +    AKF   PAFI
Sbjct: 21  PTDNKYRVVDVILRVLLLAASIASVVLMVTSKQTEIIVSPFGSRPNA---AKFQNSPAFI 77

Query: 84  YLFVALLVACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAY 143
           YL  AL VA LYS ITAL SLS +RK     +L  ++   D L+LG+VA+A G A  V Y
Sbjct: 78  YLVAALSVAGLYSIITALVSLSYMRKPIVPPKLFWILLIHDVLLLGIVAAATGTAGGVGY 137

Query: 144 IGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYK 196
           IGLKGN+H  W K  N  YDKF +H   +I +S+FA   LV L   +  SLY+
Sbjct: 138 IGLKGNTHVRWGKIRNV-YDKFCRHVGASIIVSLFAAAVLVLLVFVNANSLYR 189

Source: Beta vulgaris subsp. maritima

Species: Beta vulgaris

Genus: Beta

Family: Amaranthaceae

Order: Caryophyllales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297804684|ref|XP_002870226.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata] gi|341958534|sp|D7MAF7.1|CSPL6_ARALL RecName: Full=CASP-like protein ARALYDRAFT_915236 gi|297316062|gb|EFH46485.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/167 (46%), Positives = 105/167 (62%), Gaps = 4/167 (2%)

Query: 34  DVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPA-KFTYFPAFIYLFVALLVA 92
            V LR +LF  +  +I+++VTSKQT    +PGT   ++IPA KFT  PA IY  VAL VA
Sbjct: 31  QVVLRFVLFAATLTSIVVMVTSKQTKNIFIPGT--PIRIPAAKFTNSPALIYFVVALSVA 88

Query: 93  CLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHA 152
           C YS ++   ++S  +K +    LLL +A +D +M+G+VASA GA   VAY+GLKGN   
Sbjct: 89  CFYSIVSTFVTVSAFKKHSCSAILLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEV 148

Query: 153 GWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKGVH 199
            W K  N  YDKF +H   AIA+S+FA   L+ L++ S  SLYK + 
Sbjct: 149 RWGKICNI-YDKFCRHVGGAIAVSLFASVILLLLSIISVLSLYKKIR 194

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18414489|ref|NP_567472.1| uncharacterized protein [Arabidopsis thaliana] gi|75170023|sp|Q9FE29.1|CSPLM_ARATH RecName: Full=CASP-like protein At4g15610 gi|11908074|gb|AAG41466.1|AF326884_1 unknown protein [Arabidopsis thaliana] gi|21281195|gb|AAM44986.1| unknown protein [Arabidopsis thaliana] gi|21554675|gb|AAM63654.1| unknown [Arabidopsis thaliana] gi|110741052|dbj|BAE98620.1| hypothetical protein [Arabidopsis thaliana] gi|332658228|gb|AEE83628.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  122 bits (307), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 68/147 (46%), Positives = 94/147 (63%), Gaps = 4/147 (2%)

Query: 34  DVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPA-KFTYFPAFIYLFVALLVA 92
            V LR +LF  +  +I+++VTSKQT    +PGT   ++IPA +FT  PA IY  VAL VA
Sbjct: 30  QVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGT--PIRIPAAEFTNSPALIYFVVALSVA 87

Query: 93  CLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHA 152
           C YS ++   ++S  +K +    LLL +A +D +M+G+VASA GA   VAY+GLKGN   
Sbjct: 88  CFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEV 147

Query: 153 GWNKQANAGYDKFIKHTATAIALSIFA 179
            W K  +  YDKF +H   AIA+S+FA
Sbjct: 148 RWGKICHI-YDKFCRHVGGAIAVSLFA 173

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125558160|gb|EAZ03696.1| hypothetical protein OsI_25828 [Oryza sativa Indica Group]

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 97/166 (58%), Gaps = 4/166 (2%)

Query: 34  DVALRILLFVFSFVAILLIVTSKQTNLFPV---PGTTFSVKIPAKFTYFPAFIYLFVALL 90
           ++ALR LLF  S  A++++VT+KQT + P    P       +PAK+T+ PA IYL  AL 
Sbjct: 42  NLALRALLFAVSLSALVVLVTAKQTVMIPFVIRPPQFILAPVPAKYTHSPALIYLLAALC 101

Query: 91  VACLYSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNS 150
             C YS ITA++S+  +   A   + L  +  LD     V+ASA G A AVA++GLKGNS
Sbjct: 102 ATCFYSLITAISSVRLLSSSACSAKTLFYLILLDVFYAAVMASATGTAGAVAWVGLKGNS 161

Query: 151 HAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYK 196
           H  WNK  N  Y KF +H  ++  L++ A   LV L   + YSLY+
Sbjct: 162 HTRWNKICNV-YGKFCRHIGSSTFLALIAAIVLVLLAFLNAYSLYR 206

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	200
TAIR|locus:2081091	199	AT3G06390 "AT3G06390" [Arabido	0.895	0.899	0.344	1.6e-22
TAIR|locus:2130479	193	AT4G15610 "AT4G15610" [Arabido	0.8	0.829	0.361	1e-20
TAIR|locus:2130509	190	AT4G15630 "AT4G15630" [Arabido	0.72	0.757	0.225	3.4e-07
UNIPROTKB|A2Y2B7	162	BLE3 "CASP-like protein BLE3"	0.725	0.895	0.212	9.4e-06
UNIPROTKB|Q84UT5	162	BLE3 "CASP-like protein BLE3"	0.725	0.895	0.212	9.4e-06
TAIR|locus:505006479	182	AT4G16442 "AT4G16442" [Arabido	0.78	0.857	0.212	1.8e-05
TAIR|locus:2128649	197	AT4G20390 "AT4G20390" [Arabido	0.765	0.776	0.220	3.7e-05

TAIR|locus:2081091 AT3G06390 "AT3G06390" [Arabidopsis thaliana (taxid:3702)]

 Score = 261 (96.9 bits), Expect = 1.6e-22, P = 1.6e-22
 Identities = 62/180 (34%), Positives = 90/180 (50%)

Query:    14 PASQLKNETSRPSRVIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIP 73
             PAS     +S  S +   +ID+  R+LLF  +  A++++VTS QT +  +PG +    + 
Sbjct:    18 PASATPPPSSAASFLDCRKIDIITRVLLFSATLTALIVMVTSDQTEMTQLPGVSSPAPVS 77

Query:    74 AKFTYFPAFIYLFVALLVACLYSFITALTSLSTXXXXXXXXXXXXXXXFLDTLMXXXXXX 133
             A+F   PAFIY  VAL+VA  Y+ I+ L S+S                 LD +M      
Sbjct:    78 AEFNDSPAFIYFVVALVVASFYALISTLVSISLLLKPEFTAQFSIYLASLDMVMLGILAS 137

Query:   134 XXXXXXXXXXXXXKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYS 193
                          KGN   GWNK  N  YDKF ++ AT++ALS+FA   L+ L++ S  S
Sbjct:   138 ATGTAGGVAYIALKGNEEVGWNKICNV-YDKFCRYIATSLALSLFASLLLLVLSIWSALS 196

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2130479 AT4G15610 "AT4G15610" [Arabidopsis thaliana (taxid:3702)]

 Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
 Identities = 60/166 (36%), Positives = 85/166 (51%)

Query:    35 VALRILLFVFSFVAILLIVTSKQT-NLFPVPGTTFSVKIPA-KFTYFPAFIYLFVALLVA 92
             V LR +LF  +  +I+++VTSKQT N+F +PGT   ++IPA +FT  PA IY  VAL VA
Sbjct:    31 VVLRFVLFAATLTSIVVMVTSKQTKNIF-LPGTP--IRIPAAEFTNSPALIYFVVALSVA 87

Query:    93 CLYSFITALTSLSTXXXXXXXXXXXXXXXFLDTLMXXXXXXXXXXXXXXXXXXXKGNSHA 152
             C YS ++   ++S                 +D +M                   KGN   
Sbjct:    88 CFYSIVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGNKEV 147

Query:   153 GWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYKGV 198
              W K  +  YDKF +H   AIA+S+FA   L+ L++ S  SLYK +
Sbjct:   148 RWGKICHI-YDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKI 192

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR|locus:2130509 AT4G15630 "AT4G15630" [Arabidopsis thaliana (taxid:3702)]

 Score = 120 (47.3 bits), Expect = 3.4e-07, P = 3.4e-07
 Identities = 34/151 (22%), Positives = 61/151 (40%)

Query:    33 IDVALRILLFVFSFVAILLIVTSKQTNLFPV---PGTT-FSVKIPAKFTYFPAFIYLFVA 88
             +++ +R+L  V + VA  ++  +KQT + P+   P     +V   AK +Y  AF+Y   A
Sbjct:    27 LELTMRVLALVLTMVAATVLGVAKQTKVVPIKLIPTLPPLNVSTTAKASYLSAFVYNISA 86

Query:    89 LLVACLYSFITALTSLSTXXXXXXXXXXXXXXXFLDTLMXXXXXXXXXXXXXXXXXXXKG 148
               +AC Y+ I+ +  + +                 D +M                    G
Sbjct:    87 NAIACGYTAISIVIVMISKGKRSKSLLMAVLIG--DLMMVALLFSSTGAAGAIGLMGRHG 144

Query:   149 NSHAGWNKQANAGYDKFIKHTATAIALSIFA 179
             N H  W K     + KF    A ++A+++ A
Sbjct:   145 NKHVMWKKVCGV-FGKFCNQAAVSVAITLIA 174

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0043424 "protein histidine kinase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

UNIPROTKB|A2Y2B7 BLE3 "CASP-like protein BLE3" [Oryza sativa Indica Group (taxid:39946)]

 Score = 110 (43.8 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 34/160 (21%), Positives = 61/160 (38%)

Query:    33 IDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVA 92
             ++  LR+     +  A +++VTS++T  F      F +++ AK++Y P+FI+  VA  VA
Sbjct:     8 MNAVLRLAAAAAAATAAVVMVTSRETTSF------FGIQMEAKYSYTPSFIFFVVAYAVA 61

Query:    93 CLYSFITALTSLSTXXXXXXXXXXXXXXXFLDTLMXXXXXXXXXXXXXXXXXXXKGNSHA 152
               YS +       +                 D ++                    GNSHA
Sbjct:    62 AAYSLLVLAVPAGSALSRLALTT--------DVVLGMVLAGAVASAGAISDIAKNGNSHA 113

Query:   153 GWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTY 192
             GW       +  +  H   A+     A+     + M+S +
Sbjct:   114 GWLPVCGQIH-AYCNHVMAALIAGFVALAVHFVVVMYSLH 152

GO:0009733 "response to auxin stimulus" evidence=ISS

GO:0009741 "response to brassinosteroid stimulus" evidence=ISS

GO:0009826 "unidimensional cell growth" evidence=ISS

UNIPROTKB|Q84UT5 BLE3 "CASP-like protein BLE3" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 110 (43.8 bits), Expect = 9.4e-06, P = 9.4e-06
 Identities = 34/160 (21%), Positives = 61/160 (38%)

Query:    33 IDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVA 92
             ++  LR+     +  A +++VTS++T  F      F +++ AK++Y P+FI+  VA  VA
Sbjct:     8 MNAVLRLAAAAAAATAAVVMVTSRETTSF------FGIQMEAKYSYTPSFIFFVVAYAVA 61

Query:    93 CLYSFITALTSLSTXXXXXXXXXXXXXXXFLDTLMXXXXXXXXXXXXXXXXXXXKGNSHA 152
               YS +       +                 D ++                    GNSHA
Sbjct:    62 AAYSLLVLAVPAGSALSRLALTT--------DVVLGMVLAGAVASAGAISDIAKNGNSHA 113

Query:   153 GWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTY 192
             GW       +  +  H   A+     A+     + M+S +
Sbjct:   114 GWLPVCGQIH-AYCNHVMAALIAGFVALAVHFVVVMYSLH 152

GO:0003824 "catalytic activity" evidence=ISS

GO:0008152 "metabolic process" evidence=ISS

GO:0009733 "response to auxin stimulus" evidence=IEP

GO:0009741 "response to brassinosteroid stimulus" evidence=IMP

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0035264 "multicellular organism growth" evidence=IMP

TAIR|locus:505006479 AT4G16442 "AT4G16442" [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 35/165 (21%), Positives = 67/165 (40%)

Query:    34 DVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVAC 93
             ++ LR  + VF+ +A++L+VT  +  L       F++K  AK+T   A ++L VA  +A 
Sbjct:    12 ELLLRCSISVFALLALILVVTDTEVKLI------FTIKKTAKYTDMKAVVFLVVANGIAA 65

Query:    94 LYSFITALTSLSTXXXXXXXXXXXXXXXFL--DTLMXXXXXXXXXXXXXXXXXXXKGNSH 151
             +YS + ++  +                 F   D  M                   +G   
Sbjct:    66 VYSLLQSVRCVVGTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEED 125

Query:   152 AGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSLYK 196
               W +     Y KF    A  ++ ++ A   +V ++  S +SL++
Sbjct:   126 LQWMRVCTM-YGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFR 169

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2128649 AT4G20390 "AT4G20390" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 35/159 (22%), Positives = 65/159 (40%)

Query:    31 FRIDVALRILLFVFSFVAILLIVTSKQTNLFPVP--GTT-FSVKIPAKFTYFPAFIYLFV 87
             +++ + LRI  F+ +  A +++  +K+T    V   GT      + AKF + PAF++  +
Sbjct:    16 WKLLLGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKFQHTPAFVFFVI 75

Query:    88 ALLVACLYSFITALTSLSTXXXXXXXXXXXXXXXFLDTLMXXXXXXXXXXXXXXXXXXXK 147
             A ++   ++ +  +  + +                LD L                     
Sbjct:    76 ANVMVSFHNLLMIVVQIFSRKLEYKGLRLLSIA-ILDMLNATLVSAAANAAVFVAELGKN 134

Query:   148 GNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTL 186
             GN HA WNK  +  +  +  H A AI ++ FA   L+ L
Sbjct:   135 GNKHAKWNKVCDR-FTTYCDHGAGAI-IAAFAGVILMLL 171


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.135   0.389    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      200       166   0.00097  107 3  11 22  0.43    31
                                                     30  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  566 (60 KB)
  Total size of DFA:  124 KB (2080 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.51u 0.11s 12.62t   Elapsed:  00:00:01
  Total cpu time:  12.51u 0.11s 12.62t   Elapsed:  00:00:01
  Start:  Fri May 10 22:04:12 2013   End:  Fri May 10 22:04:13 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0000041 "transition metal ion transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
C6SVQ5	CSPL7_SOYBN	No assigned EC number	0.4587	0.93	0.9637	yes	no
B9HMP5	CSPLD_POPTR	No assigned EC number	0.4896	0.945	0.9642	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_LG_VIII1846 hypothetical protein (196 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	200
pfam04535	150	pfam04535, DUF588, Domain of unknown function (DUF	5e-27
TIGR01569	154	TIGR01569, A_tha_TIGR01569, plant integral membran	1e-26

>gnl|CDD|218134 pfam04535, DUF588, Domain of unknown function (DUF588)

 Score =  100 bits (250), Expect = 5e-27
 Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 8/150 (5%)

Query: 32  RIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLV 91
             ++ LR+  FV +  A +++ T+KQT  F      F ++  A F+  PAF YL VA  +
Sbjct: 6   LAELVLRLAAFVLALAAAVVMGTNKQTKPF------FFIQKKASFSDLPAFRYLVVANAI 59

Query: 92  ACLYSFITALTSLSTIRKLASRKR-LLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNS 150
           A  YS +  + S+  + +   R + L  L+  LD +M  ++ +A  AA A+ Y+   GNS
Sbjct: 60  AAGYSLLQLVLSVYLLSRKKPRTKGLAWLLFILDQVMAYLLLAAASAAAAIVYLARNGNS 119

Query: 151 HAGWNKQANAGYDKFIKHTATAIALSIFAV 180
           HA W K  N  + +F    A ++ALS  A 
Sbjct: 120 HANWMKICN-QFGRFCNRAAASVALSFLAF 148

This family of plant proteins contains a domain that may have a catalytic activity. It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices. Length = 150

>gnl|CDD|233471 TIGR01569, A_tha_TIGR01569, plant integral membrane protein TIGR01569

 Score = 99.4 bits (248), Expect = 1e-26
 Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 6/160 (3%)

Query: 35  VALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACL 94
           + LR+L F  +  A +++ T+++T +  V   TF     AKF+  PAF+Y  VA  +AC 
Sbjct: 1   LILRVLAFSATLAAAIVMGTNRETKVVFVQLITFK----AKFSDLPAFVYFVVANAIACG 56

Query: 95  YSFITALTSLSTIRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGW 154
           YS ++ + S+  + K       L+ + FLD +ML +++S   AA AVAY+G  GN  AGW
Sbjct: 57  YSLLSLVVSIFGLLK-RRVFFKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGW 115

Query: 155 NKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSL 194
            K     + KF    A ++ALS+FAV  LV L++ S  SL
Sbjct: 116 LKICGV-FGKFCDRIAGSLALSLFAVILLVLLSILSAISL 154

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized. Length = 154

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	200
TIGR01569	154	A_tha_TIGR01569 plant integral membrane protein TI	100.0
PF04535	149	DUF588: Domain of unknown function (DUF588); Inter	100.0
PF01284	144	MARVEL: Membrane-associating domain; InterPro: IPR	98.48

>TIGR01569 A_tha_TIGR01569 plant integral membrane protein TIGR01569

Probab=100.00  E-value=9.2e-44  Score=286.19  Aligned_cols=154  Identities=38%  Similarity=0.574  Sum_probs=140.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCcceeeeeEecccCchHHHHHHHHHHHHHHHHHHHhHHHhhcccccch
Q 043891           35 VALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKLASRK  114 (200)
Q Consensus        35 l~LR~~a~~~sl~A~~vM~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~I~~~Ysllql~~~i~~v~~~~~~~  114 (200)
                      ++||+++++++++|+++|+||||+.++..+    .+++++||+|+++|+|+|++|+|+|+|+++|+++++..++++. .+
T Consensus         1 l~LR~~~~~~sl~A~vvm~t~~qt~~~~~~----~~~~~a~f~d~~af~y~v~anai~~~Ysll~l~~~~~~~~~~~-~~   75 (154)
T TIGR01569         1 LILRVLAFSATLAAAIVMGTNRETKVVFVQ----LITFKAKFSDLPAFVYFVVANAIACGYSLLSLVVSIFGLLKRR-VF   75 (154)
T ss_pred             CcHHHHHHHHHHHHHHHhhcccceeeeecc----cceeeeeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ch
Confidence            479999999999999999999999877411    2778999999999999999999999999999999885443322 12


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 043891          115 RLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTMHSTYSL  194 (200)
Q Consensus       115 ~~~~~~f~~Dqv~ayLL~SaasAA~~v~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~lsflA~~~l~~~s~iSa~~L  194 (200)
                      ...|++|++||+++||++||++||+++++++|+||+|.+|+|+|++ +|+||+|+++|++++|+|++++++++++|++++
T Consensus        76 ~~~~~~f~~D~v~~~Ll~sa~sAA~av~~l~~~G~~~~~W~~iC~~-~~~FC~~~~~sl~~s~~a~v~~~llsv~Sa~~~  154 (154)
T TIGR01569        76 FKLIALFFLDLVMLALLSSGTSAAAAVAYVGKLGNKEAGWLKICGV-FGKFCDRIAGSLALSLFAVILLVLLSILSAISL  154 (154)
T ss_pred             hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHccccccchhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            4589999999999999999999999999999999999999999999 999999999999999999999999999999975

This model describes a region of ~160 residues found exclusively in plant proteins, generally as the near complete length of the protein. At least 24 different members are found in Arabidopsis thaliana. Members have four predicted transmembrane regions, the last of which is preceded by an invariant CXXXXX[FY]C motif. The family is not functionally characterized.

>PF04535 DUF588: Domain of unknown function (DUF588); InterPro: IPR006702 This family of plant proteins contains a domain that may have a catalytic activity

Probab=100.00  E-value=3.4e-39  Score=257.49  Aligned_cols=148  Identities=36%  Similarity=0.556  Sum_probs=136.7

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCcceeeeeEecccCchHHHHHHHHHHHHHHHHHHHhHHHh-
Q 043891           28 VIYFRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLST-  106 (200)
Q Consensus        28 ~~~~~~~l~LR~~a~~~sl~A~~vM~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~I~~~Ysllql~~~i~~-  106 (200)
                      |..+..+++||+++++++++|+++|++|+|+.++.      .++.+++|+|+++|+|++++|+|+|+|+++|++.++.. 
T Consensus         1 ~~~~~~~l~LR~~~~~~sl~a~~vm~t~~qt~~~~------~~~~~~~f~~~~af~ylv~a~~i~~~Ysl~~~~~~~~~~   74 (149)
T PF04535_consen    1 RSLRIASLVLRLLAFVLSLAALAVMATNKQTVSVF------SIQFTAKFSDYPAFRYLVAANVIACVYSLLQLVLSIYSL   74 (149)
T ss_pred             CCchhhhHHHHHHHHHHHHHHHHHHHhcCCcceee------ccccceeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45688999999999999999999999999998774      57789999999999999999999999999999999854 


Q ss_pred             hcccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccccchhhhhhhHHHHHHHHHHHHHH
Q 043891          107 IRKLASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTD  182 (200)
Q Consensus       107 v~~~~~~~~~~~~~f~~Dqv~ayLL~SaasAA~~v~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~lsflA~~~  182 (200)
                      .+++..++...|++|++||+++||++||++||+++++++++|+++.+|+++|+. +++||+|+++|++++|+|+++
T Consensus        75 ~~~~~~~~~~~~~~f~~Dqv~~~ll~sa~~Aa~~~~~~~~~g~~~~~W~~vC~~-~~~FC~~~~~sv~lsf~a~~~  149 (149)
T PF04535_consen   75 SRGKLRSKLLAWFLFILDQVLAYLLFSAASAAAAVAYLGKKGNSHVQWSKVCSQ-FGKFCNRAAASVALSFLAFVA  149 (149)
T ss_pred             HccCCcccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhccc-hhhHHHHHHHHHHHHHHHHHC
Confidence            344345677899999999999999999999999999999999999999999999 999999999999999999874

It has a conserved arginine and aspartate that could form an active site. These proteins are predicted to contain 3 or 4 transmembrane helices.

>PF01284 MARVEL: Membrane-associating domain; InterPro: IPR021128 This entry represents the ~130-residue MARVEL (MAL and related proteins for vesicle trafficking and membrane link) domain

Probab=98.48  E-value=4.5e-06  Score=64.40  Aligned_cols=141  Identities=18%  Similarity=0.067  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHhcCCcceeecCCCCcceeeeeEecccCchHHHHHHHHHHHHHHHHHHHhHHHhhccc
Q 043891           31 FRIDVALRILLFVFSFVAILLIVTSKQTNLFPVPGTTFSVKIPAKFTYFPAFIYLFVALLVACLYSFITALTSLSTIRKL  110 (200)
Q Consensus        31 ~~~~l~LR~~a~~~sl~A~~vM~t~~q~~~~~~~~~~~~~~~~a~f~~~~af~ylv~an~I~~~Ysllql~~~i~~v~~~  110 (200)
                      +....+||+++++++++.+.+++....+..            .......++..|.+.+.++...+++..++..+.. .+.
T Consensus         3 ~s~~~ilR~lq~~~~~i~~~l~~~~~~~~~------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~~   69 (144)
T PF01284_consen    3 RSPSGILRILQLVFALIIFGLVASSIATGS------------QIYGGSPSACGFALFVAVLSFLYTLIFLLLYLFS-LKY   69 (144)
T ss_pred             ccHhHHHHHHHHHHHHHHHHHHHHHHhccc------------cccCCCCcchhHHHHHHHHHHHHHHHHHHHHHHH-Hhc
Confidence            345789999999999999999998764221            1124556778999999999999988888876522 111


Q ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcccccccccccchhhhhhhHHHHHHHHHHHHHHHHHHHH
Q 043891          111 ASRKRLLLLIAFLDTLMLGVVASAIGAALAVAYIGLKGNSHAGWNKQANAGYDKFIKHTATAIALSIFAVTDLVTLTM  188 (200)
Q Consensus       111 ~~~~~~~~~~f~~Dqv~ayLL~SaasAA~~v~~l~~~G~~~~~W~~vC~~~~~~FC~~~~~Si~lsflA~~~l~~~s~  188 (200)
                      ..+....+..++.|.+++.+-+.+..+-+.-....+.+++   ++..+.. .++-|+...++.+++|++++.++.+.+
T Consensus        70 ~~~~~~~~~~~~~~~v~~il~l~a~~~~a~~~~~~~~~~~---~~~~~~~-~~~~~~~~~Aa~~f~~~~~~l~~~s~~  143 (144)
T PF01284_consen   70 RPRIPWPLVEFIFDAVFAILWLAAFIALAAYLSDHSCSNT---GNDYSYS-GCSRCGAWKAAAAFGFLNWLLFIVSAV  143 (144)
T ss_pred             ccccccchhHHHHHHHHHHHHHHHHHHHHHHhcCcccccC---CCCcCCC-CCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence            2233345678999999999998877666543322122211   1222333 456799999999999999999988765

The MARVEL domain is a module with a four transmembrane-helix architecture that has been identified in proteins of the myelin and lymphocyte (MAL), physins, gyrins and occludin families. All described MARVEL domain-containing proteins are consistent with the M-shaped topology: four transmembrane-helix region architecture with cytoplasmic N- and C-terminal regions. Their function could be related to cholesterol-rich membrane apposition events in a variety of cellular processes, such as biogenesis of vesicular transport carriers or tight junction regulation [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00