Citrus Sinensis ID: 044114
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 431 | ||||||
| 224143104 | 410 | predicted protein [Populus trichocarpa] | 0.941 | 0.990 | 0.485 | 1e-101 | |
| 255544798 | 410 | conserved hypothetical protein [Ricinus | 0.937 | 0.985 | 0.485 | 1e-99 | |
| 224075744 | 436 | predicted protein [Populus trichocarpa] | 0.972 | 0.961 | 0.467 | 3e-96 | |
| 224075748 | 436 | predicted protein [Populus trichocarpa] | 0.974 | 0.963 | 0.470 | 4e-94 | |
| 224111146 | 436 | predicted protein [Populus trichocarpa] | 0.974 | 0.963 | 0.466 | 5e-94 | |
| 224098244 | 439 | predicted protein [Populus trichocarpa] | 0.988 | 0.970 | 0.449 | 8e-94 | |
| 224144479 | 438 | predicted protein [Populus trichocarpa] | 0.960 | 0.945 | 0.460 | 3e-93 | |
| 255569108 | 421 | conserved hypothetical protein [Ricinus | 0.939 | 0.961 | 0.440 | 3e-92 | |
| 255548976 | 439 | conserved hypothetical protein [Ricinus | 0.951 | 0.933 | 0.439 | 1e-91 | |
| 255544800 | 437 | conserved hypothetical protein [Ricinus | 0.979 | 0.965 | 0.440 | 9e-91 |
| >gi|224143104|ref|XP_002324850.1| predicted protein [Populus trichocarpa] gi|222866284|gb|EEF03415.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 200/412 (48%), Positives = 278/412 (67%), Gaps = 6/412 (1%)
Query: 24 LSGELESLHPLARECSIYRVPEATRCSHPSHFTPRMVSIGPFHHGKEELKAMEEHKKRYL 83
+ GEL+SL L+ +C IY VP+ + +TP++VSIGP HHGK EL+ MEEHKKRYL
Sbjct: 1 MRGELDSLPVLSSKCCIYTVPKRLHHLNEKAYTPQLVSIGPLHHGKPELRPMEEHKKRYL 60
Query: 84 KCFLQRTKVRIASFVGFIKAREAELRNCYAETIHLGSDEFIKMVLVDAVFLIELFLKY-Y 142
+ FLQRTK+ + ++ I+ E +LR+CYAETI SDEFIKM+LVDA F+IE+ L+Y +
Sbjct: 61 QDFLQRTKLSLVDYLKVIEKNEKKLRDCYAETIEFSSDEFIKMILVDAAFIIEVLLRYHF 120
Query: 143 QPNLRTNE-DPILGKLFLYNDVTHEILLLENQLPLFILNGLFNLAKTETFEANLYEEISF 201
+P + E D + K + D+ ++ LLENQLP FIL LF+ A+ T + + +S
Sbjct: 121 KPMRKEKENDRVYNKPWAIQDIRKDMWLLENQLPFFILEDLFDPARI-TLPSGSNQMLS- 178
Query: 202 MTITCFWFRDDIVGYLPIQENLLEINFSKAKHFVDLLILCLQPSQSRAVFALKDLNIPSV 261
+T + F D+ ++E + K +H VD L +C QP QS++ LK L IPS
Sbjct: 179 ITKLAYEFSKDLWDLEEMEEKSQKNKSPKVQHLVDFLWICHQPPQSKSKKKLKTLGIPSA 238
Query: 262 MELHQAGVKFKRGSSKDLLDIKFNEGILEIPFLTVYDPTERLYRNVLAFEMMHSYTKYLN 321
ELHQAGVKFK GSSK+L DIKF GILEIP L + TE L+RN+LAFE H Y+N
Sbjct: 239 TELHQAGVKFKLGSSKNLFDIKFKNGILEIPRLEIVGATELLFRNLLAFEQCHCSKNYIN 298
Query: 322 DYIIMMNYLVSTSKDAELLLQNEII--GLGNTEAVPTVFRNLDKGCAISYSYFQYSGVVA 379
DY+I++N+LV+T+KD ELL+++ I+ L + E + +F L K + +F +SG+V
Sbjct: 299 DYVIIINHLVNTAKDVELLVKDGIVENWLWDDEGMSALFHGLVKETFVIVDHFYFSGLVE 358
Query: 380 DLQAYCKLPWHKWKATLKQNYFNTPWASISVIAAVILLLLTSIQTVCSLIAL 431
+L AYC+ PWHKW+ATLKQ+YFN PW+ IS IAAVILL+LT+IQ VCS++++
Sbjct: 359 ELNAYCRKPWHKWQATLKQHYFNNPWSIISFIAAVILLVLTTIQAVCSILSV 410
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255544798|ref|XP_002513460.1| conserved hypothetical protein [Ricinus communis] gi|223547368|gb|EEF48863.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|224075744|ref|XP_002304747.1| predicted protein [Populus trichocarpa] gi|222842179|gb|EEE79726.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224075748|ref|XP_002304749.1| predicted protein [Populus trichocarpa] gi|222842181|gb|EEE79728.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224111146|ref|XP_002332978.1| predicted protein [Populus trichocarpa] gi|222834309|gb|EEE72786.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224098244|ref|XP_002334570.1| predicted protein [Populus trichocarpa] gi|222873184|gb|EEF10315.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224144479|ref|XP_002325303.1| predicted protein [Populus trichocarpa] gi|222862178|gb|EEE99684.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255569108|ref|XP_002525523.1| conserved hypothetical protein [Ricinus communis] gi|223535202|gb|EEF36881.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255548976|ref|XP_002515544.1| conserved hypothetical protein [Ricinus communis] gi|223545488|gb|EEF46993.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|255544800|ref|XP_002513461.1| conserved hypothetical protein [Ricinus communis] gi|223547369|gb|EEF48864.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 431 | ||||||
| TAIR|locus:2116667 | 680 | AT4G31980 "AT4G31980" [Arabido | 0.935 | 0.592 | 0.372 | 2.1e-68 | |
| TAIR|locus:2148042 | 353 | AT5G11290 "AT5G11290" [Arabido | 0.802 | 0.980 | 0.362 | 2.1e-52 | |
| TAIR|locus:2044918 | 448 | AT2G36430 "AT2G36430" [Arabido | 0.879 | 0.845 | 0.304 | 3.1e-44 | |
| TAIR|locus:2083138 | 503 | AT3G50160 "AT3G50160" [Arabido | 0.819 | 0.701 | 0.320 | 1.3e-43 | |
| TAIR|locus:2083108 | 539 | AT3G50140 [Arabidopsis thalian | 0.373 | 0.298 | 0.335 | 4.7e-42 | |
| TAIR|locus:2074755 | 541 | AT3G50170 "AT3G50170" [Arabido | 0.338 | 0.269 | 0.362 | 5.9e-40 | |
| TAIR|locus:2171132 | 492 | AT5G22550 "AT5G22550" [Arabido | 0.352 | 0.308 | 0.379 | 7.7e-40 | |
| TAIR|locus:2083078 | 531 | AT3G50120 "AT3G50120" [Arabido | 0.378 | 0.306 | 0.333 | 2e-39 | |
| TAIR|locus:2171127 | 440 | AT5G22540 "AT5G22540" [Arabido | 0.881 | 0.863 | 0.274 | 4.9e-37 | |
| TAIR|locus:2074760 | 588 | AT3G50180 [Arabidopsis thalian | 0.825 | 0.605 | 0.304 | 5.4e-37 |
| TAIR|locus:2116667 AT4G31980 "AT4G31980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 156/419 (37%), Positives = 230/419 (54%)
Query: 18 EKLADSLSGELESLHPLARECSIYRVPEATRCSHPSHFTPRMVSIGPFHHGKEELKAMEE 77
+ L DS+ +L L L+ +C IY+VP R +P +TPR+VS GP H GKEEL+AME+
Sbjct: 273 DALVDSIKAKLAFLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAMED 332
Query: 78 HKKRYLKCFLQRTKVRIASFVGFIKAREAELRNCYAETIHLGSDEFIKMVLVDAVFLIEL 137
K RYL F+ RT + V + E R+CYAE + L SDEF++M++VD FL+EL
Sbjct: 333 QKYRYLLSFIPRTNSSLEDLVRLARTWEQNARSCYAEDVKLHSDEFVEMLVVDGSFLVEL 392
Query: 138 FLKYYQPNLRTNEDPILGKLFLYNDVTHEILLLENQLPLFILNGLFNLAKTETFEANLYE 197
L+ + P LR D I G + DV +++L+ENQLP F++ +F L N Y+
Sbjct: 393 LLRSHYPRLRGENDRIFGNSMMITDVCRDMILIENQLPFFVVKEIFLLL------LNYYQ 446
Query: 198 EISFMTITCFWFRDDIVGYLPIQENLLEINFSKAKHFVDLLILCLQPS-QSRAVFA-LKD 255
+ T + Y + E ++ +HFVDLL C P + + +K
Sbjct: 447 Q---GTPSIIQLAQRHFSYF-LSRIDDEKFITEPEHFVDLLRSCYLPQFPIKLEYTTVKV 502
Query: 256 LNIPSVMELHQAGVKFKRG-SSKDLLDIKFNEGILEIPFLTVYDPTERLYRNVLAFEMMH 314
N P ELH AGV+FK +S LLDI F +G+L+IP + V D TE LY+N++ FE
Sbjct: 503 DNAPEATELHTAGVRFKPAETSSCLLDISFADGVLKIPTIVVDDLTESLYKNIIGFEQCR 562
Query: 315 SYTKYLNDYIIMMNYLVSTSKDAELLLQNEIIG--LGNTEAVPTVFRNLDKGCAISYSYF 372
K DYI+++ + + DA+LL+ + II LGN+ V +F ++ K I F
Sbjct: 563 CSNKNFLDYIMLLGCFIKSPTDADLLIHSGIIVNYLGNSVDVSNLFNSISKE-VIYDRRF 621
Query: 373 QYSGVVADLQAYCKLPWHKWKATLKQNYFNTPWXXXXXXXXXXXXXXXXXQTVCSLIAL 431
+S + +LQAYC PW++WKA L+++YF+ PW Q+VCS++AL
Sbjct: 622 YFSMLSENLQAYCNTPWNRWKAILRRDYFHNPWAVASVFAALLLLLLTFIQSVCSILAL 680
|
|
| TAIR|locus:2148042 AT5G11290 "AT5G11290" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2044918 AT2G36430 "AT2G36430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2083138 AT3G50160 "AT3G50160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2083108 AT3G50140 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2074755 AT3G50170 "AT3G50170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171132 AT5G22550 "AT5G22550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2083078 AT3G50120 "AT3G50120" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171127 AT5G22540 "AT5G22540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2074760 AT3G50180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| fgenesh4_pm.C_LG_XVIII000126 | hypothetical protein (410 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 431 | |||
| pfam03140 | 387 | pfam03140, DUF247, Plant protein of unknown functi | 1e-115 |
| >gnl|CDD|217385 pfam03140, DUF247, Plant protein of unknown function | Back alignment and domain information |
|---|
Score = 341 bits (878), Expect = e-115
Identities = 151/397 (38%), Positives = 218/397 (54%), Gaps = 26/397 (6%)
Query: 40 IYRVPEATRCSHPSHFTPRMVSIGPFHHGKEELKAMEEHKKRYLKCFLQRTK--VRIASF 97
IYRVP R +P + PR+VSIGP+HHGK L+AMEEHK RYL FL RT + +
Sbjct: 1 IYRVPARLRDVNPEAYEPRVVSIGPYHHGKPHLRAMEEHKWRYLNRFLDRTGRGLSLEDL 60
Query: 98 VGFIKAREAELRNCYAE-TIHLGSDEFIKMVLVDAVFLIELFLKYYQPNLRTNEDPILGK 156
+ ++ E E R CYAE + S+EF++M+L+D F++ELFL+ + DP+ +
Sbjct: 61 LAAVRELEEEARACYAEDVDWMSSEEFVEMLLLDGCFILELFLRL-SEGIYGENDPLFAR 119
Query: 157 LFLYNDVTHEILLLENQLPLFILNGLFNLAKTETFEANLYEEISFMTITCFWFRDDIVGY 216
+L + + ++LLLENQ+P F+L LF L + S + F D
Sbjct: 120 RWLLSLIRRDLLLLENQIPFFVLEKLFELLTGR-----QDVKTSLNDLA-LRFFYDCESL 173
Query: 217 LPIQENLLEINFSKAKHFVDLLILCL---------QPSQSRAVFALKDLNIPSVMELHQA 267
LP + + E S H +DLL L + R A IPS EL +A
Sbjct: 174 LPPDDLIEE---SNVHHLLDLLRRSLLPSTSPDPTPAAPPRDNGAATPRLIPSATELREA 230
Query: 268 GVKFKRGS-SKDLLDIKFNEGILEIPFLTVYDPTERLYRNVLAFEMMH-SYTKYLNDYII 325
GV+FKR + +LD+ F G+LEIP L V D TE L RN++AFE H ++ Y+
Sbjct: 231 GVRFKRRKTASCILDVSFKRGVLEIPRLAVDDGTESLLRNLIAFEQCHGGSGNHVTSYVA 290
Query: 326 MMNYLVSTSKDAELLLQNEII--GLGNTEAVPTVFRNLDKGCAISYSYFQYSGVVADLQA 383
M+ L++T++D LL + I+ LG+ E V F L +G SGV D+
Sbjct: 291 FMDNLINTAEDVALLRRKGILENLLGSDEEVAKFFNRLCRGVVFDVDDSYLSGVFEDVNR 350
Query: 384 YCKLPWHKWKATLKQNYFNTPWASISVIAAVILLLLT 420
YC+ W++WKATL++ YF+ PWA+IS++AAV+LL+LT
Sbjct: 351 YCRSRWNRWKATLRRKYFSNPWAAISLLAAVVLLVLT 387
|
The function of the plant proteins constituting this family is unknown. Length = 387 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 431 | |||
| PF03140 | 391 | DUF247: Plant protein of unknown function; InterPr | 100.0 |
| >PF03140 DUF247: Plant protein of unknown function; InterPro: IPR004158 The function of the plant proteins constituting this family is unknown | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-108 Score=843.46 Aligned_cols=371 Identities=42% Similarity=0.730 Sum_probs=335.0
Q ss_pred eeecCCccccCCCCCCccceeeeccccCChhhhhHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHhcccccc
Q 044114 40 IYRVPEATRCSHPSHFTPRMVSIGPFHHGKEELKAMEEHKKRYLKCFLQRTK---VRIASFVGFIKAREAELRNCYAETI 116 (431)
Q Consensus 40 I~rVP~~lr~~n~~aY~P~~VSIGPyHhg~~~L~~mE~~K~~~~~~~l~r~~---~~l~~~~~~i~~~e~~~R~~Y~~~~ 116 (431)
|||||+++|++|+++|+|++|||||||||+++|+.||++||+|++.|++|++ .++++++++|+++|++||+||++++
T Consensus 1 I~rVP~~lr~~~~~~Y~P~~VsIGPyH~g~~~L~~mE~~K~~~l~~~l~~~~~~~~~l~~~~~~i~~~e~~~R~~Y~~~~ 80 (391)
T PF03140_consen 1 IYRVPESLRDVNPKAYTPQVVSIGPYHHGKPDLQEMEEHKLRYLHRFLKRSGAPAESLEDYVEAIRSLEEEARACYAEDI 80 (391)
T ss_pred CcCCCHHHccCCchhcCCceEEeCCCCCCchhhhhhHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHhcccc
Confidence 8999999999999999999999999999999999999999999999999998 7899999999999999999999999
Q ss_pred C-CChHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-cccccchhhHHHHHHHhhccCchHHHHHHHHhhhhccccccc
Q 044114 117 H-LGSDEFIKMVLVDAVFLIELFLKYYQPNLRTNEDP-ILGKLFLYNDVTHEILLLENQLPLFILNGLFNLAKTETFEAN 194 (431)
Q Consensus 117 ~-~~~~ef~~MmllDGCFiLe~l~~~~~~~~~~~~d~-~~~~~~~~~~i~~DllLLENQiPffVL~~L~~~~~~~~~~~~ 194 (431)
+ +++++|++||++|||||||+|+++.. ..+.+|| +++.+|....|++||+|||||||||||++||++..+ ..
T Consensus 81 ~~~~~~~f~~MmllDgCFlLe~~~~~~~--~~~~~d~~~~~~~~~~~~i~~Dl~LLENQIPffVL~~L~~l~~~----~~ 154 (391)
T PF03140_consen 81 DDMSSDEFVEMMLLDGCFLLEFFLRYSR--SDGENDPGIFSRPWLLSAIRRDLLLLENQIPFFVLEKLFELLFG----SK 154 (391)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhhhh--ccccccccccccccccccchhheeeecccchHHHHHHHHHHhcc----cc
Confidence 7 99999999999999999999999876 2346788 889999999999999999999999999999999884 33
Q ss_pred ccccccHHHHHHhhccccccCCCCCcchhhccccCcCCChHHHHHHHhCCCC--Cc-cc--c-c-----cccccCCCHHH
Q 044114 195 LYEEISFMTITCFWFRDDIVGYLPIQENLLEINFSKAKHFVDLLILCLQPSQ--SR-AV--F-A-----LKDLNIPSVME 263 (431)
Q Consensus 195 ~~~~~~l~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~HlLdL~~~~~~p~~--~~-~~--~-~-----~~~~~~~sAte 263 (431)
.....++.+++.+||....+.. .+. ......+++|||||+|.+++|++ .. .+ + . .....||||||
T Consensus 155 ~~~~~~l~~l~~~~~~~~~~~~-~~~---~~~~~~~~~HlL~L~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~sA~e 230 (391)
T PF03140_consen 155 SDVDESLIDLVLKFFYKHWPSW-PPD---EPISNPEPHHLLDLLRMSLLPSPPSSSPTPPRPPRSNGEKPPPKRIRSATE 230 (391)
T ss_pred cCccchHHHHHHhHhccccccc-ccc---ccccCCCCCChHHHHHHHhccccCCcccCCCCcccccccccccccCCCHHH
Confidence 3446789999999994332222 111 12234578999999999999932 11 11 1 1 13468999999
Q ss_pred HHHcCcEEEeCCCC-CccceEEccceeecceEEeecCcchhcccHHHHhhhccC-CcchhhHHHHHHhhcCChHhHHHHH
Q 044114 264 LHQAGVKFKRGSSK-DLLDIKFNEGILEIPFLTVYDPTERLYRNVLAFEMMHSY-TKYLNDYIIMMNYLVSTSKDAELLL 341 (431)
Q Consensus 264 L~~aGVkfk~~~~~-~llDI~F~~G~L~IP~l~id~~T~~llrNLiA~Eq~~~~-~~~vtsY~~fM~~Li~t~eDV~lL~ 341 (431)
|++|||+||++++. +++||+|++|+|+||+|.||++|+++||||||||||+.. +.+|||||.||++||+|++||++|+
T Consensus 231 L~~aGV~fk~~~~~~~~lDv~F~~G~L~IP~L~id~~T~~~lrNLiA~Eq~~~~~~~~vtsY~~fm~~Li~t~~DV~lL~ 310 (391)
T PF03140_consen 231 LREAGVKFKPSETDRSLLDVKFKKGVLEIPPLYIDDNTESLLRNLIAFEQCHPPTGSYVTSYVFFMDSLINTPEDVELLR 310 (391)
T ss_pred HHhCCcEEeeccCccccccceecCCEEEeCeEEECCcchHHHhHHHHHHHHhccCCchHhHHHHHHHHHhCcHhhHHHHH
Confidence 99999999998876 599999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred HcCee--ccCCCchHHHHHHhhccCCcccCCCCchHHHHHHHHhhhcCchhHhHhhhcccccccchHHHHHHHHHHHHHH
Q 044114 342 QNEII--GLGNTEAVPTVFRNLDKGCAISYSYFQYSGVVADLQAYCKLPWHKWKATLKQNYFNTPWASISVIAAVILLLL 419 (431)
Q Consensus 342 ~~gIi--~lgsdeeVa~lF~~L~~~~~~~~~~~y~~~v~~~ln~~~~~r~~~w~a~l~~~yf~npW~~is~~aA~ill~l 419 (431)
++||| ++|||+||+++||+||+++..+.+++||.+++++||+||++||++|+|+++|+||+|||+++|++||+++|+|
T Consensus 311 ~kgIi~~~l~~d~eva~~F~~L~~~v~~~~~~~~~~~v~~~l~~~~~~~~~~~~a~l~~~yf~~pw~~is~~aa~~ll~l 390 (391)
T PF03140_consen 311 RKGIIVNWLGSDEEVAKLFNGLCKGVVFDVDDSYYSDVCEDLNKYYQSRWNRWWAWLRRKYFSNPWTFISLVAAIILLLL 390 (391)
T ss_pred hCCeEecCCCCcHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHhhhhcCCcHHHHHHHHHHHHHHh
Confidence 99999 8999999999999999999988778899999999999999999999999999999999999999999999999
Q ss_pred H
Q 044114 420 T 420 (431)
Q Consensus 420 t 420 (431)
|
T Consensus 391 T 391 (391)
T PF03140_consen 391 T 391 (391)
T ss_pred C
Confidence 7
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 431 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 45.2 bits (106), Expect = 4e-05
Identities = 48/345 (13%), Positives = 103/345 (29%), Gaps = 87/345 (25%)
Query: 2 DTRKH---EHEGYGVSID--MEKLADSLSGELESL-------HPLARECSIYRVPEATRC 49
T H +H ++ D L L + L +P SI + E+ R
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRR--LSI--IAESIR- 338
Query: 50 SHPSHFTP-RMVSIGPFHHGKEE-LKAME--EHKKRYLKCFLQRTKVRIASFV-----GF 100
+ + + V+ E L +E E++K + + + I + +
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFD 398
Query: 101 IKAREAELRNCYAETIHLGSDEFIKMVLVD------AVFLIELFLKYYQPNLRTNEDPIL 154
+ + + ++ K LV+ + + ++L+ + L
Sbjct: 399 VIKSDVMVV----------VNKLHKYSLVEKQPKESTISIPSIYLELKVKL---ENEYAL 445
Query: 155 GKLFL--YNDVTHEILLLENQLPLFILNGLFN-----LAKTETFE-----ANLYEEISFM 202
+ + YN + ++ +P ++ ++ L E E ++ + F+
Sbjct: 446 HRSIVDHYN--IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFL 503
Query: 203 -----TITCFWFRDDIVGYLPIQENLLEINFSKAKHFVDLLILCLQPSQSRAVFALKDLN 257
+ W I L ++ F K + D P R V A+ D
Sbjct: 504 EQKIRHDSTAW-----NASGSILNTLQQLKFYK-PYICD-----NDPKYERLVNAILDF- 551
Query: 258 IPSVMELHQAGVKFKRGSSKDLLDIKFNEGILEIPFLTVYDPTER 302
L + DLL I L +++ +
Sbjct: 552 ------LPKIEENLICSKYTDLLRI-----ALMAEDEAIFEEAHK 585
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00