Citrus Sinensis ID: 044201
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 558 | ||||||
| 225435743 | 558 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.994 | 0.809 | 0.0 | |
| 147838656 | 558 | hypothetical protein VITISV_022864 [Viti | 0.994 | 0.994 | 0.809 | 0.0 | |
| 255572288 | 565 | conserved hypothetical protein [Ricinus | 0.994 | 0.982 | 0.809 | 0.0 | |
| 449452686 | 557 | PREDICTED: uncharacterized protein LOC10 | 0.994 | 0.996 | 0.821 | 0.0 | |
| 297813343 | 557 | hypothetical protein ARALYDRAFT_489778 [ | 0.989 | 0.991 | 0.776 | 0.0 | |
| 297746466 | 586 | unnamed protein product [Vitis vinifera] | 0.965 | 0.919 | 0.787 | 0.0 | |
| 356510951 | 573 | PREDICTED: uncharacterized protein LOC10 | 0.992 | 0.966 | 0.750 | 0.0 | |
| 357518863 | 573 | hypothetical protein MTR_8g085780 [Medic | 0.983 | 0.958 | 0.767 | 0.0 | |
| 15236611 | 552 | calcium ion binding protein [Arabidopsis | 0.985 | 0.996 | 0.773 | 0.0 | |
| 388509150 | 573 | unknown [Medicago truncatula] | 0.980 | 0.954 | 0.764 | 0.0 |
| >gi|225435743|ref|XP_002285710.1| PREDICTED: uncharacterized protein LOC100253639 isoform 1 [Vitis vinifera] gi|359478459|ref|XP_003632119.1| PREDICTED: uncharacterized protein LOC100253639 isoform 2 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 955 bits (2469), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 454/561 (80%), Positives = 496/561 (88%), Gaps = 6/561 (1%)
Query: 1 MKESNPITEPIGQNLIKLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESAPALTKFFTK 60
MKE + +TEPIGQNLIK+ISN+CFSVFVF+VLIFTVIAITYQPPDPWLES+PALTK FT+
Sbjct: 1 MKEDSNLTEPIGQNLIKVISNVCFSVFVFAVLIFTVIAITYQPPDPWLESSPALTKLFTQ 60
Query: 61 TENATFKDDSSILKTGEDLQAMPLA---PLVPPVSSITEVVIEKSEEEVKNMTVTEKSDC 117
NATF++D+S+LKTGEDL +A + P V ITE VIE+ EE V NM++ KSDC
Sbjct: 61 FHNATFQNDNSVLKTGEDLPDFGVAETPAVAPAVMPITEAVIEEKEERVTNMSL--KSDC 118
Query: 118 DELRVVNCSDPRVLIAVERFNLRLFKSIVFLEYQKPVNGSKANECDVAWRFRNKKEKSWR 177
D VNCSDPRVLIA+ERFNLR FK+IVFLEYQ PV+GS NECDV+WRFRNKKEKSWR
Sbjct: 119 DLTGPVNCSDPRVLIAIERFNLRFFKAIVFLEYQTPVSGSAPNECDVSWRFRNKKEKSWR 178
Query: 178 KYRDFRRFRFGYGENCTYKIVRAGGWHSGFNARRSFRNRVNATSRSVGNPKVAPAFRDDE 237
KYRDFRRFR G GENCTY++ A GWHSG NARR R+RVNAT G ++AP RD+E
Sbjct: 179 KYRDFRRFRIGVGENCTYRVTGANGWHSGVNARRQ-RSRVNATRSGGGIGRIAPPVRDEE 237
Query: 238 INDTIPTLGSLTNFRKGKYLYYSRGGDYCKGMNQYMWSFLCGLGEAIYLNRTFVMDLSVC 297
INDTIP LGS FRKGKYLYYSRGGDYCKGMN ++WSFLCGLGEA YLNRTFVMDLS+C
Sbjct: 238 INDTIPVLGSEMTFRKGKYLYYSRGGDYCKGMNHFLWSFLCGLGEAQYLNRTFVMDLSIC 297
Query: 298 LAATYNPSNKDEEGKDFRYYFDFEHLKEVASVVEEGEFLRDWKKWDRGHKRKVPVKKVVT 357
LAATYNPSNKDEEGKDFRYYFDFEHLKEVAS+VEEGEFLRDWKKWD KRKVPV+KV T
Sbjct: 298 LAATYNPSNKDEEGKDFRYYFDFEHLKEVASIVEEGEFLRDWKKWDHSRKRKVPVRKVAT 357
Query: 358 HKVTPVQLKKDKSTIIWRQFDSPEPENYWYRVCEGQAAKYIQRPWHALWKSKRLMNIVTE 417
+KVTP+QL KD+STII+RQFD+PEPENYWYRVCEGQAAKYIQRPWHALWKSKRLMNIVTE
Sbjct: 358 YKVTPMQLSKDRSTIIYRQFDAPEPENYWYRVCEGQAAKYIQRPWHALWKSKRLMNIVTE 417
Query: 418 ISGQMDWDFDAVHVVRGEKAQNKELWPHLDVDTSPDALLTKLQGMIHPWRNLYIATNEPF 477
ISG+MDWDFDAVHVVRGEKAQNKELWPHLD DTSPDALL KL+ M+HPWRNLYIATNEPF
Sbjct: 418 ISGRMDWDFDAVHVVRGEKAQNKELWPHLDSDTSPDALLAKLKEMVHPWRNLYIATNEPF 477
Query: 478 YNYFDKLRSQYKVHLLDDYKELWSNTSEWYNETTLLNDGRPVEFDGYMRVAVDTEVFYRA 537
YNYFDKLRSQYKVHLLDDYKELW NTS+WYNET LLN GRPVEFDGYM+VAVDTEV YRA
Sbjct: 478 YNYFDKLRSQYKVHLLDDYKELWGNTSDWYNETRLLNRGRPVEFDGYMKVAVDTEVLYRA 537
Query: 538 KTRVETFYNLTKDCKDGVNTC 558
KTRVETFYNLTKDCKDG+NTC
Sbjct: 538 KTRVETFYNLTKDCKDGINTC 558
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147838656|emb|CAN65049.1| hypothetical protein VITISV_022864 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|255572288|ref|XP_002527083.1| conserved hypothetical protein [Ricinus communis] gi|223533588|gb|EEF35327.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449452686|ref|XP_004144090.1| PREDICTED: uncharacterized protein LOC101222244 [Cucumis sativus] gi|449493542|ref|XP_004159340.1| PREDICTED: uncharacterized LOC101222244 [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|297813343|ref|XP_002874555.1| hypothetical protein ARALYDRAFT_489778 [Arabidopsis lyrata subsp. lyrata] gi|297320392|gb|EFH50814.1| hypothetical protein ARALYDRAFT_489778 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|297746466|emb|CBI16522.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356510951|ref|XP_003524196.1| PREDICTED: uncharacterized protein LOC100802779 [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|357518863|ref|XP_003629720.1| hypothetical protein MTR_8g085780 [Medicago truncatula] gi|355523742|gb|AET04196.1| hypothetical protein MTR_8g085780 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|15236611|ref|NP_192621.1| calcium ion binding protein [Arabidopsis thaliana] gi|7267523|emb|CAB78006.1| putative protein [Arabidopsis thaliana] gi|7321070|emb|CAB82117.1| putative protein [Arabidopsis thaliana] gi|15912229|gb|AAL08248.1| AT4g08810/T32A17_120 [Arabidopsis thaliana] gi|27363304|gb|AAO11571.1| At4g08810/T32A17_120 [Arabidopsis thaliana] gi|332657280|gb|AEE82680.1| calcium ion binding protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|388509150|gb|AFK42641.1| unknown [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 558 | ||||||
| TAIR|locus:2138228 | 552 | SUB1 "AT4G08810" [Arabidopsis | 0.982 | 0.992 | 0.731 | 1.6e-230 | |
| TAIR|locus:2059767 | 568 | AT2G04280 "AT2G04280" [Arabido | 0.969 | 0.952 | 0.471 | 4e-138 | |
| TAIR|locus:2135773 | 561 | AT4G12700 "AT4G12700" [Arabido | 0.965 | 0.960 | 0.451 | 3e-133 | |
| TAIR|locus:2063192 | 404 | AT2G41150 [Arabidopsis thalian | 0.286 | 0.396 | 0.269 | 4.3e-12 | |
| TAIR|locus:2103640 | 403 | AT3G56750 "AT3G56750" [Arabido | 0.202 | 0.280 | 0.28 | 5.8e-11 |
| TAIR|locus:2138228 SUB1 "AT4G08810" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2224 (787.9 bits), Expect = 1.6e-230, P = 1.6e-230
Identities = 411/562 (73%), Positives = 458/562 (81%)
Query: 1 MKESNPITEPIGQNLIKLISNLCFSVFVFSVLIFTVIAITYQPPDPWLESAPALTKFFTK 60
MKES+ TEPI QNLIKLISN+CFSVFVF+VLIFTVIA+TYQPPDPWLESAPALTK T+
Sbjct: 1 MKESDLTTEPIAQNLIKLISNVCFSVFVFTVLIFTVIAVTYQPPDPWLESAPALTKLLTE 60
Query: 61 TENATFKDDSSILKTGEDLQAMPLAPLVPPXXXXXXXXXXXXXXXXX---NMTVTEKSDC 117
TENATFK D SILKTGEDL + P + PP NMTV DC
Sbjct: 61 TENATFKIDGSILKTGEDLASSPSSS--PPSNSTEQVTEATIEKSEAKIGNMTVKNSIDC 118
Query: 118 DE-LRVVNCSDPRVLIAVERFNLRLFKSIVFLEYQKPVNGSKANECDVAWRFRNKKEKSW 176
DE L++VNCSDPRVL+AVERFNL++FKSIVFLEY+ PVNGSK +ECDV+WRFRNKKEKSW
Sbjct: 119 DEDLKIVNCSDPRVLVAVERFNLKVFKSIVFLEYETPVNGSKLDECDVSWRFRNKKEKSW 178
Query: 177 RKYRDXXXXXXGYGENCTYKIVRAGGWHSGFNARRSFRNRVNATSRSVGNPKVAPAFRDD 236
R+YRD G+GENCTYK+ GWHSG NARR R++ S S G D
Sbjct: 179 RRYRDFRRFRFGFGENCTYKVFHTSGWHSGVNARRP---RISRPSSSRG-----ARGGDS 230
Query: 237 EINDTIPTLGSLTNFRKGKYLYYSRGGDYCKGMNQYMWSFLCGLGEAIYLNRTFVMDLSV 296
EINDTIPTLGS T+FR+GKYLYYSRGGDYCKGMNQYMWSFLCGLGEA+YLNRTFVMDLS+
Sbjct: 231 EINDTIPTLGSQTSFRRGKYLYYSRGGDYCKGMNQYMWSFLCGLGEAMYLNRTFVMDLSL 290
Query: 297 CLAATYNPSNKDEEGKDFRYYFDFEHLKEVASVVEEGEFLRDWKKWDRGXXXXXXXXXXX 356
CL+++Y+ KDEEGKDFRYYFDFEHLKE AS+VEEGEFLRDWKKW+R
Sbjct: 291 CLSSSYSSKGKDEEGKDFRYYFDFEHLKETASIVEEGEFLRDWKKWNRLHKRKVPVRKVK 350
Query: 357 XXXXXXXQLKKDKSTIIWRQFDSPEPENYWYRVCEGQAAKYIQRPWHALWKSKRLMNIVT 416
QL KDKSTIIWRQFD+PEPENYWYRVCEGQA+KY++RPWHALWKSKRLMNIV+
Sbjct: 351 THRVSPLQLSKDKSTIIWRQFDTPEPENYWYRVCEGQASKYVERPWHALWKSKRLMNIVS 410
Query: 417 EISGQMDWDFDAVHVVRGEKAQNKELWPHLDVDTSPDALLTKLQGMIHPWRNLYIATNEP 476
EISG+MDWDFDAVHVVRGEKA+NK+LWPHLD DT PDA+LTKL+G++ WRNLY+ATNEP
Sbjct: 411 EISGKMDWDFDAVHVVRGEKAKNKKLWPHLDADTWPDAILTKLKGLVQVWRNLYVATNEP 470
Query: 477 FYNYFDKLRSQYKVHLLDDYKELWSNTSEWYNETTLLNDGRPVEFDGYMRVAVDTEVFYR 536
FYNYFDKLRSQYKVHLLDDY LW N SEWYNET+LLN+G+PVEFDGYMRVAVDTEVFYR
Sbjct: 471 FYNYFDKLRSQYKVHLLDDYSYLWGNKSEWYNETSLLNNGKPVEFDGYMRVAVDTEVFYR 530
Query: 537 AKTRVETFYNLTKDCKDGVNTC 558
KTRVETFYNLT DCKDG+NTC
Sbjct: 531 GKTRVETFYNLTTDCKDGINTC 552
|
|
| TAIR|locus:2059767 AT2G04280 "AT2G04280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2135773 AT4G12700 "AT4G12700" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2063192 AT2G41150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2103640 AT3G56750 "AT3G56750" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 558 | |||
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 99.61 | |
| PF01531 | 298 | Glyco_transf_11: Glycosyl transferase family 11; I | 84.93 |
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.9e-16 Score=154.09 Aligned_cols=244 Identities=24% Similarity=0.314 Sum_probs=122.3
Q ss_pred CCcchhHHHHHhhccccccccceeeeecccccccccCCCCCCCccccceeecchhhhcccc-ceeecchhhhchhhhhcc
Q 044201 267 KGMNQYMWSFLCGLGEAIYLNRTFVMDLSVCLAATYNPSNKDEEGKDFRYYFDFEHLKEVA-SVVEEGEFLRDWKKWDRG 345 (558)
Q Consensus 267 kgm~H~~~SllCAL~EA~yLNRTfVMdl~mCLs~~~n~~g~~eegkd~r~yfD~ehl~~tv-~VIe~~qF~~dw~~W~~~ 345 (558)
.|.|.|.-+|+-|+-=|+.||||||||- .+.....+ +......-.|.-+||++||++.+ +||+-.+|+. ..|...
T Consensus 8 GGfnNQr~~~~~a~~~A~~LnRTLVLPp-~~~~~~~~-~~~~~~~ipf~~~fD~~~l~~~~~~vi~~~ef~~--~~~~~~ 83 (351)
T PF10250_consen 8 GGFNNQRMGFENAVVFAKALNRTLVLPP-FIKHYHWK-DQSKQRHIPFSDFFDVEHLRKFLRPVITMEEFLP--KHWDEV 83 (351)
T ss_dssp SSHHHHHHHHHHHHHHHHHHT-EEE--E-EEEESSSS-----EEEEEHHHHB-HHHHTTTS--EE-HHHHHH--HHS-GG
T ss_pred CCHHHHHHHHHHHHHHHHHhCCEEEcCC-cccccccc-ccccccccChhhhccHHHHHHHhhCceehheecc--chhccc
Confidence 4899999999999999999999999987 33332222 11112334578899999999999 9999888872 223331
Q ss_pred cc---------------------------CccCceeeeEE-eeeeee-ecc------------cccceEEeccCCCCCCC
Q 044201 346 HK---------------------------RKVPVKKVVTH-KVTPVQ-LKK------------DKSTIIWRQFDSPEPEN 384 (558)
Q Consensus 346 ~~---------------------------~kL~~r~v~~~-~Vtp~~-l~~------------~k~~li~rkf~~~ep~n 384 (558)
.. ++......... ...+.- +.+ ....+.+..+...-+.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 163 (351)
T PF10250_consen 84 FRLQYCWSPWESGSWDDNMKDGNPFGPFWDKFPIKFDPCEFWSSPSLYLEDVLPELREWNENSEHPVIAFTGFESRLPDN 163 (351)
T ss_dssp G-EEEESS-B--------TTSSTTHHHHHHHTT---SEEE-E-TTSTTTT-STTHHHHHHHHTT-SEEEESS-SS-SS--
T ss_pred cchhhcccccccccchhhccccccccccccccceeeccccccCCchhhHHHhhhHHhhhccccccccceeccccccchhc
Confidence 00 01111111000 111100 111 01222233333331221
Q ss_pred ceEEEecccccccccccchhhhhhHHHHHHHHHHhcccC---CCCcEEEeecC-cc------------------------
Q 044201 385 YWYRVCEGQAAKYIQRPWHALWKSKRLMNIVTEISGQMD---WDFDAVHVVRG-EK------------------------ 436 (558)
Q Consensus 385 yWy~vCeg~~~s~i~~P~~~l~kskrLm~iv~~I~~rm~---~DfDavHVrRG-Dk------------------------ 436 (558)
++ ...+++ .|..++.|+++|+++..++. ..|-|||+|+| |+
T Consensus 164 ~~--------~~~~~r---~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~~~~C~~~~~~~~~~~~~~~~~~~~ 232 (351)
T PF10250_consen 164 YL--------DRDLQR---YLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDWFSACEFKGERHLLASPRCWGKKSI 232 (351)
T ss_dssp GG--------GGGGGG---G--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHHHHHHCT-T----TTTHHHH-GGGT
T ss_pred cc--------CccceE---EEecCHHHHHHHHHHHHHhhcccCceEEEeecccCchHhhcccCCchHHHHHhHhhccccc
Confidence 11 122333 77888999999999998876 99999999999 88
Q ss_pred ---c-cccccCCCCCCCCCHHHHHHHhhcccC--CCcEEEEecCCCC--ccchhhhhcceEEeeccchHHHhhcCCcccc
Q 044201 437 ---A-QNKELWPHLDVDTSPDALLTKLQGMIH--PWRNLYIATNEPF--YNYFDKLRSQYKVHLLDDYKELWSNTSEWYN 508 (558)
Q Consensus 437 ---~-~nk~l~P~LD~DtspE~i~~~i~~~i~--~GR~LYIATnE~~--~~fFdpLk~kY~vh~LddFk~Lw~~~SeWy~ 508 (558)
. ......| +.+.++..|++.+. ..++||||||+.. ...+++|++.|.-.+ .++.+. ...
T Consensus 233 ~~~~~~~~~~~p------~~~~~~~~i~~~~~~~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~---~~~~~~----~~~ 299 (351)
T PF10250_consen 233 NPEKKRRNGCCP------STPQEAKQILRALGKNNTTVVYIATDEIYGGERRLDPLKNMFPNVV---TKDDLL----SHE 299 (351)
T ss_dssp T-----HHHHS--------HHHHHHHHHHHHHHHT-SEEEEEESS-----------HHHHHHHH---GGGT------EE-
T ss_pred cchhhhhcCCCC------ChHHHHHHHHHHhccCCCCEEEEecCcccccchhHHHHHHHhhhhE---eccccC----CHH
Confidence 1 0112223 23455566665554 4599999999943 356788888777444 111111 112
Q ss_pred cccccCCCcccccCCchhhhhhHHhHhccceeEEeecc
Q 044201 509 ETTLLNDGRPVEFDGYMRVAVDTEVFYRAKTRVETFYN 546 (558)
Q Consensus 509 Et~~Ln~G~PV~fdgYmr~mVDteVf~rGK~~VeTf~~ 546 (558)
| ...+++.+..|||++|.+++..||+|..+
T Consensus 300 ~--------~~~~~~~~~a~vD~~i~~~s~~Figt~~S 329 (351)
T PF10250_consen 300 E--------LEPLNDDQLAMVDQEICSRSDVFIGTCGS 329 (351)
T ss_dssp ---------S-----S--HHHHHHHHHHSSEEEE-TT-
T ss_pred H--------hhhccccchhHHHHHHHhcCCEEEecCcc
Confidence 2 22444577899999999999999999876
|
Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A. |
| >PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 558 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 4e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 2e-04
Identities = 38/286 (13%), Positives = 88/286 (30%), Gaps = 88/286 (30%)
Query: 316 YYFDFE------HLKEVASVVEEGEFLRDWKKWD-RGHKRKVPVKKVVTHKV---TPVQ- 364
++ DFE K++ SV E+ F+ ++ D + + + K+ + H + V
Sbjct: 5 HHMDFETGEHQYQYKDILSVFED-AFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSG 63
Query: 365 -------LKKDKSTIIWRQFDSPEPENY-W--------YRVCEGQAAKYIQ---RPW--- 402
L + ++ + + NY + R YI+ R +
Sbjct: 64 TLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDN 123
Query: 403 -----HALWKSKRLMNIVTEISGQMDWDFDAVH-------------VVRGEKAQ----NK 440
+ + + + + + + + V K Q K
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183
Query: 441 ELWPHLDVDTSPDALLTKLQGMIHPWRNLYIATNEPFYNYF-------DKLR-----SQY 488
W +L SP+ +L LQ +++ + + ++ N +LR Y
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243
Query: 489 KVHL--LDDYKELWSNTSEWYNETTLLNDGRPVE-FDGYMRVAVDT 531
+ L L + + + + F+ ++ + T
Sbjct: 244 ENCLLVLLN---VQ--------------NAKAWNAFNLSCKILLTT 272
|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} Length = 526 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 558 | |||
| 4ap5_A | 408 | GDP-fucose protein O-fucosyltransferase 2; GT-B, G | 99.62 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 98.35 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 97.77 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 97.21 |
| >4ap5_A GDP-fucose protein O-fucosyltransferase 2; GT-B, GT68; HET: NAG; 3.00A {Homo sapiens} PDB: 4ap6_A* | Back alignment and structure |
|---|
Probab=99.62 E-value=5.2e-16 Score=155.35 Aligned_cols=274 Identities=15% Similarity=0.174 Sum_probs=158.4
Q ss_pred ccceeEEEeCC-CCcCCCcchhHHHHHhhccccccccce----eeeecccccccccCCCCCCCccccceeecchhhhccc
Q 044201 252 RKGKYLYYSRG-GDYCKGMNQYMWSFLCGLGEAIYLNRT----FVMDLSVCLAATYNPSNKDEEGKDFRYYFDFEHLKEV 326 (558)
Q Consensus 252 ~~gKYLyy~~g-Gd~Ckgm~H~~~SllCAL~EA~yLNRT----fVMdl~mCLs~~~n~~g~~eegkd~r~yfD~ehl~~t 326 (558)
++-|||.|--- | .|-|=|-=.|+=++.=|+.|||| ||||--.=+ ..|......+..-.|.-+||+++|++-
T Consensus 20 ~~~rYl~y~~~~g---~Gfn~qrd~f~~~a~~a~~Lnrt~~~~LVLPPw~~~-~h~~~~~~~~~~ipf~~fFDv~~L~~~ 95 (408)
T 4ap5_A 20 SRRRYLLYDVNPP---EGFNLRRDVYIRIASLLKTLLKTEEWVLVLPPWGRL-YHWQSPDIHQVRIPWSEFFDLPSLNKN 95 (408)
T ss_dssp CCCEEEEECCCTT---CCHHHHHHHHHHHHHHHHHHHTTSCEEEEECCBCCS-CGGGSTTSCCCSBCGGGTBCHHHHHTT
T ss_pred cccceEEecCCCC---CcccHHHHHHHHHHHHHHHHhCcCCcEEEeCCCccc-ccccCCcccceeccHHHhcCHHHHHhh
Confidence 56899998542 2 35666656666666788999999 999933212 222222222223458889999999999
Q ss_pred cceeecchhhhchhh--hhcc--cc---CccCceeeeEEeeeeeeecccccceEEecc--CCCCCCCce--------EEE
Q 044201 327 ASVVEEGEFLRDWKK--WDRG--HK---RKVPVKKVVTHKVTPVQLKKDKSTIIWRQF--DSPEPENYW--------YRV 389 (558)
Q Consensus 327 v~VIe~~qF~~dw~~--W~~~--~~---~kL~~r~v~~~~Vtp~~l~~~k~~li~rkf--~~~ep~nyW--------y~v 389 (558)
+|||+-.+|+++... |..+ .+ .+.......+ ..+.+...+......- +.+. +-+| -..
T Consensus 96 vpVI~meeFl~~~~~~~~~~v~~l~~~~~~~~~~~~~~----k~~~~~c~~~~~~~~~~~~~~~-gpfw~~~~v~~~~~~ 170 (408)
T 4ap5_A 96 IPVIEYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEE----KVDERPCIDQLLYSQDKHEYYR-GWFWGYEETRGLNVS 170 (408)
T ss_dssp SCEEEHHHHHHHSSSSEEEEEEEEECCTTCCCTTCCCC----CEEEECCSSCCSCEECTTSCEE-CCGGGCTTCEEEEEE
T ss_pred CCeeEHHHHHHHhCCCCCcceeeccccHhhcccccccc----hhhhhhhhhccccccccccCcc-CCcccccccccCCce
Confidence 999999999987642 3322 00 0000000000 0111110111110000 0000 0011 112
Q ss_pred eccccc--cccc-------------------ccch------------hhhhhHHHHHHHHHHhcc---------------
Q 044201 390 CEGQAA--KYIQ-------------------RPWH------------ALWKSKRLMNIVTEISGQ--------------- 421 (558)
Q Consensus 390 Ceg~~~--s~i~-------------------~P~~------------~l~kskrLm~iv~~I~~r--------------- 421 (558)
|-.--. +.+. .|.+ .|..++.|++++++....
T Consensus 171 c~~~~~~~~~~~~~~~~~~~~~s~~v~~~e~~l~~~~~~~~~~~~~r~l~~s~~l~~~a~~fi~~~L~~~~~~~h~r~~~ 250 (408)
T 4ap5_A 171 CLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNSTDDADRIPFQE 250 (408)
T ss_dssp EEEECSBGGGGHHHHHHCTTCSEEEEESGGGSBCSSTTSHHHHHHHHTCCBCHHHHHHHHHHHHHHHCCCTTTTTCCCCS
T ss_pred eEEEeecchhhhhhhhhcCChhhhhhhhcccCCccccchHhhhhHHHHhhhhHHHHHHHHHHHHHHhCcccceeecccch
Confidence 211000 0000 0111 133578888888775432
Q ss_pred ------------cCCCCcEEEeecCcccccccc-CCCCCCCCCHHHHHHHhhcccC--CCcEEEEecCCCCccchhhhhc
Q 044201 422 ------------MDWDFDAVHVVRGEKAQNKEL-WPHLDVDTSPDALLTKLQGMIH--PWRNLYIATNEPFYNYFDKLRS 486 (558)
Q Consensus 422 ------------m~~DfDavHVrRGDk~~nk~l-~P~LD~DtspE~i~~~i~~~i~--~GR~LYIATnE~~~~fFdpLk~ 486 (558)
+++.|.++|+||||+++.+++ .| |.+.+++.|++.+. ..+.||||||+.+..+++..+.
T Consensus 251 dw~~~~~~~~~~~~~~y~~~H~Rr~d~~~~~~~~~p------s~~~~~~~i~~~~~~~~~~~VyiATD~~~~~~~~l~~~ 324 (408)
T 4ap5_A 251 DWMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVP------SLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKL 324 (408)
T ss_dssp SGGGCCCCTTCBCCEEEEEEEECCTTTTTTTCSSSC------CHHHHHHHHHHHHHHHTCSCEEEEECCCHHHHHHHHHH
T ss_pred hHhhhhcccccccCCCccccccccccchhhhhccCC------CHHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHh
Confidence 356899999999999876532 23 45677777776655 6678999999988777665555
Q ss_pred ceEEeeccchHHHhhcCCcccccccccCCCcccccCCchhhhhhHHhHhccceeEEeecc--------------ccc---
Q 044201 487 QYKVHLLDDYKELWSNTSEWYNETTLLNDGRPVEFDGYMRVAVDTEVFYRAKTRVETFYN--------------LTK--- 549 (558)
Q Consensus 487 kY~vh~LddFk~Lw~~~SeWy~Et~~Ln~G~PV~fdgYmr~mVDteVf~rGK~~VeTf~~--------------lt~--- 549 (558)
...+.+++++.+... + ..||| ..|||++|..||+.||+|..+ +++
T Consensus 325 ~~~~~~~~~~~~~~~----------------~-~~d~~-~a~idq~Ic~~a~~FiGt~~StfS~~I~~eR~~~G~~~~~t 386 (408)
T 4ap5_A 325 LPEMVRFEPTWEELE----------------L-YKDGG-VAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTT 386 (408)
T ss_dssp CTTEECCCCCHHHHH----------------H-HHHHH-HHHHHHHHHHTEEEEEBCTTCHHHHHHHHHHHHHTBCGGGT
T ss_pred CCCcEEecCcchhhh----------------c-cCcch-hhHHHHHHHHhCCeeEeCCcCchhHHHHHHHHhcCCCCCcc
Confidence 555666666665543 1 23445 489999999999999998754 232
Q ss_pred ---ccccccCCC
Q 044201 550 ---DCKDGVNTC 558 (558)
Q Consensus 550 ---DCKdGintC 558 (558)
=|+|+-..|
T Consensus 387 ~~~~c~~~~~~~ 398 (408)
T 4ap5_A 387 YNRFCGDQEKAC 398 (408)
T ss_dssp SCBCCCTTCSSC
T ss_pred ccccCCCCccCC
Confidence 388888777
|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00