Citrus Sinensis ID: 044588

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------
Protein Sequence
MAAPATLANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYSPVKKCADVEA
Secondary Structure (PSIPRED)
cccccccccccEEEEEEEEccccHHHHHHHHHHHHccEEEEcccEEEEEccccccccccccccEEEEEEEEccHHHHHHHHHHcccEEEcEEEEEEcccccEEEccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEcEccccccEEEEcccHHHHHHHHHHHHccEEEEcccEEEEEccccccccHHccccEEEEEEEcHHHHHHHHHHHHcccEEccEEEEEEccccEEEEEEccccccccccc
Coil and Loop (DISEMBL)
maapatlanfmgmkpqllVEESKATNVVQFYKTtsgaqleiagstflvsnfsndsaaAKNMGIGCVLCLEIDDVEAALAKAMSggvwatgrvgkvkdpcgftwliyspvkkcadvea
Flexible Loop (DISEMBL)
maapatlanfmgmkPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMsggvwatgrvgkVKDPCGFTwliyspvkkcadvea
Low Complexity Region (SEG)
MAAPATLANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYSPVKKCADVEA
Disordered region (IsUnstruct)
***************QLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYSPVKKC*****
Disordered Region (DISOPRED)
*********FMGMKPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSND******MGIGCVLCLEIDDVEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYS**********
Disordered Region (DISEMBL)
MAAPATLANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYSPVKKCADVEA
Disordered Region (DISPRO)
****ATLANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYSPVKKC*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAAPATLANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYSPVKKCADVEA
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	117	2.2.26 [Sep-21-2011]
Q9LV66	166	Uncharacterized protein A	yes	no	0.820	0.578	0.323	1e-06

>sp|Q9LV66|Y5848_ARATH Uncharacterized protein At5g48480 OS=Arabidopsis thaliana GN=At5g48480 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 34/130 (26%)

Query: 10  FMGMKPQLLVEESKATNVVQFYKTTSGA-----------------------QLEIAGSTF 46
           F   K  LLVE  K  + V FYK+  GA                       +L +AGS+F
Sbjct: 23  FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSF 82

Query: 47  LVSNFSN--DSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWAT---------GRVGKV 95
           +V + S+    + AK+ G G    L   D EAA+AKA+  G             G  GKV
Sbjct: 83  VVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKV 142

Query: 96  KDPCGFTWLI 105
            DP G TW+ 
Sbjct: 143 TDPFGVTWIF 152

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	117
351723033	165	uncharacterized protein LOC100306467 [Gl	0.991	0.703	0.440	4e-21
356567730	163	PREDICTED: uncharacterized protein At5g4	0.965	0.693	0.436	6e-20
28565534	166	early tobacco anther 1 [Nicotiana tabacu	0.880	0.620	0.407	3e-18
388492568	167	unknown [Lotus japonicus]	0.888	0.622	0.439	4e-15
388490626	165	unknown [Medicago truncatula]	0.948	0.672	0.385	7e-15
357505041	165	Early tobacco anther [Medicago truncatul	0.948	0.672	0.385	7e-15
224069912	164	predicted protein [Populus trichocarpa]	0.931	0.664	0.417	8e-14
449437180	159	PREDICTED: uncharacterized protein At5g4	0.888	0.654	0.35	5e-13
449511236	159	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.888	0.654	0.342	4e-12
225470242	161	PREDICTED: uncharacterized protein At5g4	0.871	0.633	0.398	7e-12

>gi|351723033|ref|NP_001235473.1| uncharacterized protein LOC100306467 [Glycine max] gi|255628635|gb|ACU14662.1| unknown [Glycine max]

 Score =  105 bits (262), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/152 (44%), Positives = 84/152 (55%), Gaps = 36/152 (23%)

Query: 2   AAPATLANFMGMKPQLLVEESKATNVVQFYKTTSGAQ----------------------- 38
           AA A   +F+ +KPQLLVE  KA + + F+K   GA+                       
Sbjct: 14  AAAAATVSFVAVKPQLLVEAPKANDAILFFKAAFGAEEVGRTLNPKRKAEHELPLILSAE 73

Query: 39  LEIAGSTFLVSNFSND-SAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWATG------- 90
           L+IAGST LV++  +D S+ AK  G G VLCLE +DV+ A+AKA+S G  A G       
Sbjct: 74  LKIAGSTILVADLVDDTSSPAKTGGNGVVLCLETEDVDGAVAKAVSAGAVAEGEVAEGEV 133

Query: 91  -----RVGKVKDPCGFTWLIYSPVKKCADVEA 117
                RVGKVKDP GF WL  +P KKCADVEA
Sbjct: 134 ACCGGRVGKVKDPYGFVWLFCTPGKKCADVEA 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356567730|ref|XP_003552070.1| PREDICTED: uncharacterized protein At5g48480-like [Glycine max]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 80/149 (53%), Gaps = 36/149 (24%)

Query: 5   ATLANFMGMKPQLLVEESKATNVVQFYKTTSGAQ-----------------------LEI 41
           A   +F+ +KPQLL+E  KA + V FYK    A+                       L+I
Sbjct: 15  AAAVSFVALKPQLLIEAPKANDAVLFYKAAFAAEEVGRTLNPKRKAEHELPLILSAELKI 74

Query: 42  AGSTFLVSNFSNDSAA-AKNMGIGCVLCLEIDDVEAALAKAMSGGVWATG---------- 90
           AGST LV++  +DSA+ AK  G   VLCLE +DVE A+ KA+S G  A G          
Sbjct: 75  AGSTILVADLVDDSASTAKAGGNRVVLCLETEDVEGAIEKAVSAGAVADGEVAEGEDACC 134

Query: 91  --RVGKVKDPCGFTWLIYSPVKKCADVEA 117
             RVGKVKDP GF WL  +P KKCADVEA
Sbjct: 135 GGRVGKVKDPYGFVWLFCAPGKKCADVEA 163

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|28565534|gb|AAO43000.1| early tobacco anther 1 [Nicotiana tabacum]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/140 (40%), Positives = 72/140 (51%), Gaps = 37/140 (26%)

Query: 9   NFMGMKPQLLVEESKATNVVQFYKT----------------------TSGAQLEIAGSTF 46
            F  +KPQL VE  KA +  QFYK                        S  +L++  S+F
Sbjct: 25  TFTAVKPQLFVEAPKAKDAAQFYKAAFGVEEVTRVNQKRKAEQEIPLVSSVELKLGSSSF 84

Query: 47  LVSNFSND--SAAAKNMGIGCVLCLEIDDVEAALAKAMS-------------GGVWATGR 91
           LVSN ++D  SA  K    GCV CLE +DVEAA+AKA+S             G  +  GR
Sbjct: 85  LVSNLTDDDSSAPVKAATTGCVFCLETEDVEAAVAKAVSAGAVSEGEIAEGDGAAYFGGR 144

Query: 92  VGKVKDPCGFTWLIYSPVKK 111
           VGK+KDP G+ W+I SPVKK
Sbjct: 145 VGKLKDPYGYIWMICSPVKK 164

Source: Nicotiana tabacum

Species: Nicotiana tabacum

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388492568|gb|AFK34350.1| unknown [Lotus japonicus]

 Score = 85.5 bits (210), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/141 (43%), Positives = 72/141 (51%), Gaps = 37/141 (26%)

Query: 14  KPQLLVEESKATNVVQFYKTTSGAQ-----------------------LEIAGSTFLVSN 50
           KPQLLVE  KA + V FYK   GA+                       L+IAGS+ LVS+
Sbjct: 27  KPQLLVEAPKANDAVLFYKAAFGAEEVSRALNPKRKADHELPLILSAELKIAGSSILVSD 86

Query: 51  FSNDSAA-AKNMGIGCVLCLEIDDVEAALAKAMSGGV-------------WATGRVGKVK 96
            + DS A AK  G G VLCLE +DVEAA+AKA+  G                 G V KVK
Sbjct: 87  LAVDSTAPAKTGGNGIVLCLETEDVEAAVAKAVRAGAVKEGEVVEGEGGACCGGLVVKVK 146

Query: 97  DPCGFTWLIYSPVKKCADVEA 117
           DP GF W I SPVK  A+V A
Sbjct: 147 DPYGFIWQICSPVKASAEVAA 167

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388490626|gb|AFK33379.1| unknown [Medicago truncatula]

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 76/148 (51%), Gaps = 37/148 (25%)

Query: 7   LANFMGMKPQLLVEESKATNVVQFYKTTSGAQ-----------------------LEIAG 43
           + +F+  KPQL VE  KA + V FYK    A+                       L+IAG
Sbjct: 18  VVSFVAFKPQLFVEAPKANDAVVFYKNAFAAEEVSRSLNAKRKADQELPLVLSAELKIAG 77

Query: 44  STFLVSNFSNDSAA-AKNMGIGCVLCLEIDDVEAALAKAMSGGVWAT------------G 90
           ++FLV++  +DSA   K+ G G V CLE +++EAA+AKA+S G  A             G
Sbjct: 78  ASFLVADTVDDSAKLVKSGGNGVVFCLESENIEAAIAKAVSAGAVAEGEVAECEGACGGG 137

Query: 91  RVGKVKDPCGFTWLIYSPVKKC-ADVEA 117
           RVGKV DP G+ W   +P KK   DVEA
Sbjct: 138 RVGKVTDPYGYVWQFCTPAKKAVGDVEA 165

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357505041|ref|XP_003622809.1| Early tobacco anther [Medicago truncatula] gi|355497824|gb|AES79027.1| Early tobacco anther [Medicago truncatula] gi|388501826|gb|AFK38979.1| unknown [Medicago truncatula]

 Score = 84.7 bits (208), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 57/148 (38%), Positives = 76/148 (51%), Gaps = 37/148 (25%)

Query: 7   LANFMGMKPQLLVEESKATNVVQFYKTTSGAQ-----------------------LEIAG 43
           + +F+  KPQL VE  KA + V FYK    A+                       L+IAG
Sbjct: 18  VVSFVAFKPQLFVEAPKANDAVVFYKNAFAAEEVSRSLNAKRKADQELPLVLSAELKIAG 77

Query: 44  STFLVSNFSNDSAA-AKNMGIGCVLCLEIDDVEAALAKAMSGGVWAT------------G 90
           ++FLV++  +DSA   K+ G G V CLE +++EAA+AKA+S G  A             G
Sbjct: 78  ASFLVADAVDDSAKLVKSGGNGVVFCLESENIEAAIAKAVSAGAVAEGEVAECEGACGGG 137

Query: 91  RVGKVKDPCGFTWLIYSPVKKC-ADVEA 117
           RVGKV DP G+ W   +P KK   DVEA
Sbjct: 138 RVGKVTDPYGYVWQFCTPAKKAVGDVEA 165

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069912|ref|XP_002303084.1| predicted protein [Populus trichocarpa] gi|118487570|gb|ABK95611.1| unknown [Populus trichocarpa] gi|222844810|gb|EEE82357.1| predicted protein [Populus trichocarpa]

 Score = 80.9 bits (198), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 61/146 (41%), Positives = 73/146 (50%), Gaps = 37/146 (25%)

Query: 9   NFMGMKPQLLVEESKATNVVQFYKTTSGA-----------------------QLEIAGST 45
           +F   KPQL VE  KA + VQFYKT  GA                       QL++AGST
Sbjct: 19  SFKSFKPQLFVEAPKANDAVQFYKTAFGAVETCRTTQPKRKADQELPHIVSAQLQLAGST 78

Query: 46  FLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAM-------------SGGVWATGRV 92
           FLVS+ S+DSA+ K  G    +CLE +DVEAA+ KA+              G      RV
Sbjct: 79  FLVSDLSDDSASTKAGGTVFAMCLETEDVEAAVTKAVAAGAVAEGGVVDGEGACCCAERV 138

Query: 93  GKVKDPCGFTWLIYSPVKKC-ADVEA 117
             VKDP GF W   SP  KC A+VEA
Sbjct: 139 TTVKDPYGFVWQFCSPADKCGANVEA 164

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437180|ref|XP_004136370.1| PREDICTED: uncharacterized protein At5g48480-like [Cucumis sativus]

 Score = 78.6 bits (192), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 70/140 (50%), Gaps = 36/140 (25%)

Query: 9   NFMGMKPQLLVEESKATNVVQFYKTTSGAQ-----------------------LEIAGST 45
           +F   KPQLL++  KAT+ V FYK    A+                       L ++  +
Sbjct: 15  SFKAFKPQLLLQAPKATDAVDFYKAAFAAEELNRTLHSKRKAEQETPAILSVELRVSDFS 74

Query: 46  FLVSNFSNDSAAAKNMGIG-CVLCLEIDDVEAALAKAMSGGV------------WATGRV 92
            LVSN  +DSA+A+ +     VL LE +D+EAA++KA+S G             +   RV
Sbjct: 75  LLVSNVFDDSASAEKVAESRVVLFLETEDIEAAVSKAVSAGAVVESKIAEGDGPYVGNRV 134

Query: 93  GKVKDPCGFTWLIYSPVKKC 112
            K+KDP GFTWLI +P K+ 
Sbjct: 135 AKLKDPFGFTWLIGTPAKES 154

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449511236|ref|XP_004163901.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein At5g48480-like [Cucumis sativus]

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 69/140 (49%), Gaps = 36/140 (25%)

Query: 9   NFMGMKPQLLVEESKATNVVQFYKTTSGAQ-----------------------LEIAGST 45
           +F   KPQLL++  KAT+ V FYK    A+                       L ++  +
Sbjct: 15  SFKAFKPQLLLQAPKATDAVDFYKAAFAAEELNRTLHSKRKAEQETPAILSVELRVSDFS 74

Query: 46  FLVSNFSNDSAAAKNMGIG-CVLCLEIDDVEAALAKAMSGGV------------WATGRV 92
            LVSN  +DSA+A+ +     VL LE +D+EAA++KA+S G             +   RV
Sbjct: 75  LLVSNVFDDSASAEKVAESRVVLFLETEDIEAAVSKAVSAGAVVESKIAEGDGPYVGNRV 134

Query: 93  GKVKDPCGFTWLIYSPVKKC 112
            K+KDP G TWLI +P K+ 
Sbjct: 135 AKLKDPFGXTWLIGTPAKES 154

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225470242|ref|XP_002263284.1| PREDICTED: uncharacterized protein At5g48480 [Vitis vinifera]

 Score = 74.7 bits (182), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 67/138 (48%), Gaps = 36/138 (26%)

Query: 14  KPQLLVEESKATNVVQFYKTTSGAQ-----------------------LEIAGSTFLVSN 50
           KPQL VE  KAT+ VQFYK   GA+                       ++I   + LVS+
Sbjct: 22  KPQLFVEAPKATDAVQFYKAAFGAEEVNRTMHPKRKADQELPLILSAEVKIGSYSLLVSD 81

Query: 51  FSNDSAA-AKNMGIGCVLCLEIDDVEAA------------LAKAMSGGVWATGRVGKVKD 97
            ++DS A AK +G GC +CLE D+VEAA             A A        GRV K+KD
Sbjct: 82  LADDSDALAKTVGTGCTICLETDEVEAAVVKAVAAGATNECATADGESACCGGRVAKLKD 141

Query: 98  PCGFTWLIYSPVKKCADV 115
           P G  WLI SP KK  DV
Sbjct: 142 PYGCVWLICSPAKKPVDV 159

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	117
TAIR|locus:2165996	166	AT5G48480 "AT5G48480" [Arabido	0.581	0.409	0.392	1e-10

TAIR|locus:2165996 AT5G48480 "AT5G48480" [Arabidopsis thaliana (taxid:3702)]

 Score = 105 (42.0 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
 Identities = 31/79 (39%), Positives = 43/79 (54%)

Query:    37 AQLEIAGSTFLVSNFSN--DSAAAKNMGIGCVLCLEIDDVEAALAKAMSGG---VWAT-- 89
             ++L +AGS+F+V + S+    + AK+ G G    L   D EAA+AKA+  G   V  T  
Sbjct:    73 SELNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEA 132

Query:    90 ----GRVGKVKDPCGFTWL 104
                 G  GKV DP G TW+
Sbjct:   133 EVELGFKGKVTDPFGVTWI 151

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	117
cd07246	123	cd07246, Glo_EDI_BRP_like_8, This conserved domain	1e-09
COG2764	136	COG2764, PhnB, Uncharacterized protein conserved i	9e-08
pfam00903	120	pfam00903, Glyoxalase, Glyoxalase/Bleomycin resist	0.002

>gnl|CDD|211349 cd07246, Glo_EDI_BRP_like_8, This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

 Score = 51.4 bits (124), Expect = 1e-09
 Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 37/128 (28%)

Query: 12  GMKPQLLVEESKATNVVQFYKTTSGAQ----------------LEIAGSTFLVS----NF 51
            + P L+V ++ A   + FYK   GA+                L I  S  +++      
Sbjct: 2   TVTPYLIVRDAAAA--IDFYKKAFGAEELARMPDDDGRIMHAELRIGDSVLMLADEFPEH 59

Query: 52  SNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWAT-----------GRVGKVKDPCG 100
               A+    G    L L ++DV+A  A+A++ G  AT            R G V+DP G
Sbjct: 60  GASPASWG--GTPVSLHLYVEDVDATYARAVAAG--ATSVMPPADQFWGDRYGGVRDPFG 115

Query: 101 FTWLIYSP 108
             W I + 
Sbjct: 116 HRWWIATH 123

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins. Length = 123

>gnl|CDD|225356 COG2764, PhnB, Uncharacterized protein conserved in bacteria [Function unknown]

 Score = 46.9 bits (112), Expect = 9e-08
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 13/85 (15%)

Query: 37  AQLEIAGSTFLVS-NFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGV--------- 86
           A+L I GST ++S  F +  A     G    L L ++DV+A   +A + G          
Sbjct: 51  AELRIGGSTIMLSDAFPDMGATEGG-GTSLSLDLYVEDVDAVFERAAAAGATVVMPLEDT 109

Query: 87  -WATGRVGKVKDPCGFTWLIYSPVK 110
            W   R G+V DP G  W++ +PV+
Sbjct: 110 FWG-DRYGQVTDPFGVVWMLNTPVE 133

Length = 136

>gnl|CDD|216182 pfam00903, Glyoxalase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily

 Score = 35.1 bits (81), Expect = 0.002
 Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 9/47 (19%)

Query: 66  VLCLEIDDVEAALAKAMSGGV---------WATGRVGKVKDPCGFTW 103
            +   +DDV+AA  +  + GV            GR    +DP G   
Sbjct: 72  FIAFSVDDVDAAYDRLKAAGVEIVREPGRHGWGGRYSYFRDPDGNLI 118

Length = 120

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	117
COG2764	136	PhnB Uncharacterized protein conserved in bacteria	99.9
cd08355	122	Glo_EDI_BRP_like_14 This conserved domain belongs	99.81
cd07246	122	Glo_EDI_BRP_like_8 This conserved domain belongs t	99.8
PRK10148	147	hypothetical protein; Provisional	99.8
cd06588	128	PhnB_like Escherichia coli PhnB and similar protei	99.77
cd08359	119	Glo_EDI_BRP_like_22 This conserved domain belongs	99.73
PF06983	116	3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltrans	99.72
cd08356	113	Glo_EDI_BRP_like_17 This conserved domain belongs	99.7
cd09011	120	Glo_EDI_BRP_like_23 This conserved domain belongs	99.69
cd08350	120	BLMT_like BLMT, a bleomycin resistance protein enc	99.69
cd07264	125	Glo_EDI_BRP_like_15 This conserved domain belongs	99.68
cd07238	112	Glo_EDI_BRP_like_5 This conserved domain belongs t	99.66
cd08349	112	BLMA_like Bleomycin binding protein (BLMA) and sim	99.64
COG3324	127	Predicted enzyme related to lactoylglutathione lya	99.6
cd07261	114	Glo_EDI_BRP_like_11 This conserved domain belongs	99.59
cd08342	136	HPPD_N_like N-terminal domain of 4-hydroxyphenylpy	99.59
PF12681	108	Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B	99.58
cd07235	122	MRD Mitomycin C resistance protein (MRD). Mitomyci	99.57
cd07247	114	SgaA_N_like N-terminal domain of Streptomyces gris	99.56
COG3865	151	Uncharacterized protein conserved in bacteria [Fun	99.52
PRK11478	129	putative lyase; Provisional	99.49
cd07263	119	Glo_EDI_BRP_like_16 This conserved domain belongs	99.49
cd07233	121	Glyoxalase_I Glyoxalase I catalyzes the isomerizat	99.48
cd08357	125	Glo_EDI_BRP_like_18 This conserved domain belongs	99.48
cd09012	124	Glo_EDI_BRP_like_24 This conserved domain belongs	99.48
cd07245	114	Glo_EDI_BRP_like_9 This conserved domain belongs t	99.47
cd08345	113	Fosfomycin_RP Fosfomycin resistant protein; inhibi	99.46
PRK10291	129	glyoxalase I; Provisional	99.46
cd08351	123	ChaP_like ChaP, an enzyme involved in the biosynth	99.46
cd08352	125	Glo_EDI_BRP_like_1 This conserved domain belongs t	99.45
cd08354	122	Glo_EDI_BRP_like_13 This conserved domain belongs	99.45
PRK04101	139	fosfomycin resistance protein FosB; Provisional	99.45
cd07253	125	Glo_EDI_BRP_like_2 This conserved domain belongs t	99.44
TIGR03645	162	glyox_marine lactoylglutathione lyase family prote	99.44
cd08353	142	Glo_EDI_BRP_like_7 This conserved domain belongs t	99.43
cd07251	121	Glo_EDI_BRP_like_10 This conserved domain belongs	99.42
cd07254	120	Glo_EDI_BRP_like_20 This conserved domain belongs	99.4
TIGR03081	128	metmalonyl_epim methylmalonyl-CoA epimerase. Membe	99.4
cd07244	121	FosA FosA, a Fosfomycin resistance protein, cataly	99.39
PRK06724	128	hypothetical protein; Provisional	99.39
cd08363	131	FosB FosB, a fosfomycin resistance protein, cataly	99.38
TIGR00068	150	glyox_I lactoylglutathione lyase. Glyoxylase I is	99.38
PLN02367	233	lactoylglutathione lyase	99.38
cd07241	125	Glo_EDI_BRP_like_3 This conserved domain belongs t	99.37
cd07255	125	Glo_EDI_BRP_like_12 This conserved domain belongs	99.35
cd08361	124	PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cuma	99.33
cd08344	112	MhqB_like_N N-terminal domain of MhqB, a type I ex	99.33
cd08362	120	BphC5-RrK37_N_like N-terminal, non-catalytic, doma	99.33
PLN03042	185	Lactoylglutathione lyase; Provisional	99.33
cd08347	157	PcpA_C_like C-terminal domain of Sphingobium chlor	99.33
PLN02300	286	lactoylglutathione lyase	99.32
cd08348	134	BphC2-C3-RGP6_C_like The single-domain 2,3-dihydro	99.32
cd07252	120	BphC1-RGP6_N_like N-terminal domain of 2,3-dihydro	99.31
cd08343	131	ED_TypeI_classII_C C-terminal domain of type I, cl	99.31
cd06587	112	Glo_EDI_BRP_like This domain superfamily is found	99.3
cd07265	122	2_3_CTD_N N-terminal domain of catechol 2,3-dioxyg	99.3
cd08364	131	FosX FosX, a fosfomycin resistance protein, cataly	99.28
cd07266	121	HPCD_N_class_II N-terminal domain of 3,4-dihydroxy	99.28
cd08346	126	PcpA_N_like N-terminal domain of Sphingobium chlor	99.26
cd07240	117	ED_TypeI_classII_N N-terminal domain of type I, cl	99.26
cd07239	144	BphC5-RK37_C_like C-terminal, catalytic, domain of	99.25
cd07262	123	Glo_EDI_BRP_like_19 This conserved domain belongs	99.25
cd09013	121	BphC-JF8_N_like N-terminal, non-catalytic, domain	99.24
cd07267	113	THT_Oxygenase_N N-terminal domain of 2,4,5-trihydr	99.23
cd07242	128	Glo_EDI_BRP_like_6 This conserved domain belongs t	99.22
COG3607	133	Predicted lactoylglutathione lyase [General functi	99.22
cd07249	128	MMCE Methylmalonyl-CoA epimerase (MMCE). MMCE, als	99.2
cd07257	153	THT_oxygenase_C The C-terminal domain of 2,4,5-Tri	99.2
cd08358	127	Glo_EDI_BRP_like_21 This conserved domain belongs	99.19
cd08360	134	MhqB_like_C C-terminal domain of Burkholderia sp.	99.17
cd07237	154	BphC1-RGP6_C_like C-terminal domain of 2,3-dihydro	99.15
cd07258	141	PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cuma	99.14
cd07243	143	2_3_CTD_C C-terminal domain of catechol 2,3-dioxyg	99.14
PF00903	128	Glyoxalase: Glyoxalase/Bleomycin resistance protei	99.13
cd07256	161	HPCD_C_class_II C-terminal domain of 3,4-dihydroxy	99.1
PLN02300	286	lactoylglutathione lyase	99.1
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	99.07
cd09014	166	BphC-JF8_C_like C-terminal, catalytic, domain of B	99.06
PRK01037	357	trmD tRNA (guanine-N(1)-)-methyltransferase/unknow	98.98
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	98.96
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	98.92
TIGR03211	303	catechol_2_3 catechol 2,3 dioxygenase. Members of	98.88
TIGR03213	286	23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase	98.85
KOG2944	170	consensus Glyoxalase [Carbohydrate transport and m	98.85
TIGR02295	294	HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase. T	98.8
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	98.61
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	98.59
COG3565	138	Predicted dioxygenase of extradiol dioxygenase fam	98.53
cd07250	191	HPPD_C_like C-terminal domain of 4-hydroxyphenylpy	98.06
COG0346	138	GloA Lactoylglutathione lyase and related lyases [	98.02
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	97.97
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	97.88
KOG2943	299	consensus Predicted glyoxalase [Carbohydrate trans	97.81
TIGR01263	353	4HPPD 4-hydroxyphenylpyruvate dioxygenase. This pr	97.77
PF14506	125	CppA_N: CppA N-terminal; PDB: 3E0R_D.	97.54
PF15067	236	FAM124: FAM124 family	96.5
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	96.38
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	95.75
PLN02875	398	4-hydroxyphenylpyruvate dioxygenase	95.41
PF14507	101	CppA_C: CppA C-terminal; PDB: 3E0R_D.	95.12
PF14696	139	Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, H	94.55
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	93.82
COG2514	265	Predicted ring-cleavage extradiol dioxygenase [Gen	92.97
PF13468	175	Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B.	90.57
COG3185	363	4-hydroxyphenylpyruvate dioxygenase and related he	90.46
PF13669	109	Glyoxalase_4: Glyoxalase/Bleomycin resistance prot	90.17
PF07494	24	Reg_prop: Two component regulator propeller; Inter	83.91
KOG0638	381	consensus 4-hydroxyphenylpyruvate dioxygenase [Ami	80.32

>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.90  E-value=2.2e-22  Score=134.99  Aligned_cols=99  Identities=33%  Similarity=0.591  Sum_probs=82.1

Q ss_pred             ceeEEEEecCCCHHHHHHHHHhhhC--------------------------eEEEEcCeEEEEecCCCCCccccCCCcce
Q 044588           12 GMKPQLLVEESKATNVVQFYKTTSG--------------------------AQLEIAGSTFLVSNFSNDSAAAKNMGIGC   65 (117)
Q Consensus        12 ~~~p~L~v~~~D~~~a~~FY~~~fG--------------------------~~l~~~~~~l~~~~~~~~g~~~~~~~~~~   65 (117)
                      .++|||.+++ |+++|++||+++||                          ++|+++|..||++|..+........+.+.
T Consensus         1 ~l~PYl~f~g-n~~~Al~fY~~vFgae~~~~~~~~d~~~~~~~~~~~~i~HA~l~i~g~~im~sd~~~~~~~~~~~~~s~   79 (136)
T COG2764           1 TLSPYLFFNG-NAREALAFYKEVFGAEELKRVPFGDMPSSAGEPPGGRIMHAELRIGGSTIMLSDAFPDMGATEGGGTSL   79 (136)
T ss_pred             CcceEEEECC-CHHHHHHHHHHHhCceEEEEEEcCccCccccccccCceEEEEEEECCEEEEEecCCCccCcccCCCeeE
Confidence            4789999984 99999999999999                          46677788888888766222112223667


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecccCC
Q 044588           66 VLCLEIDDVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        66 ~l~l~v~dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      +|++.++|+|+.|+||.++|+++         |.|++.|+||||+.|+|+++.+.
T Consensus        80 ~l~~~~~d~da~f~~a~~aGa~v~mpl~~~fwG~r~G~v~D~fGv~W~l~~~~~~  134 (136)
T COG2764          80 SLDLYVEDVDAVFERAAAAGATVVMPLEDTFWGDRYGQVTDPFGVVWMLNTPVES  134 (136)
T ss_pred             EEEEEehHHHHHHHHHHhcCCeEEecchhcCcccceEEEECCCCCEEEEecCccC
Confidence            88889999999999999999888         89999999999999999988764

>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.81  E-value=1.7e-18  Score=112.58  Aligned_cols=93  Identities=19%  Similarity=0.253  Sum_probs=69.7

Q ss_pred             eeEEEEecCCCHHHHHHHHHhhhCeEE----------------EEcCeEEEEecCCCCCcc---ccCCCcceEEEEEeCC
Q 044588           13 MKPQLLVEESKATNVVQFYKTTSGAQL----------------EIAGSTFLVSNFSNDSAA---AKNMGIGCVLCLEIDD   73 (117)
Q Consensus        13 ~~p~L~v~~~D~~~a~~FY~~~fG~~l----------------~~~~~~l~~~~~~~~g~~---~~~~~~~~~l~l~v~d   73 (117)
                      ++|+|.|+  |+++|++||+++||.+.                .+++..+++.........   ....+.+.+++|.|+|
T Consensus         1 ~~p~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~d   78 (122)
T cd08355           1 VWPTLRYR--DAAAAIDWLTDAFGFEERLVVPDDDGGVAHAELRFGDGGVMVGSVRDDYRASSARAGGAGTQGVYVVVDD   78 (122)
T ss_pred             CeEEEEEC--CHHHHHHHHHHhcCCEEEEEEeCCCCcEEEEEEEECCEEEEEecCCCcccccccccCCCceEEEEEEECC
Confidence            57999999  99999999999999433                223333444332211110   1122367899999999


Q ss_pred             HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEec
Q 044588           74 VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        74 vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      +|+++++++++|+++         |.+.++++||+||.|+|++
T Consensus        79 ~d~~~~~l~~~G~~v~~~~~~~~~g~~~~~~~DPdG~~~~l~~  121 (122)
T cd08355          79 VDAHYERARAAGAEILREPTDTPYGSREFTARDPEGNLWTFGT  121 (122)
T ss_pred             HHHHHHHHHHCCCEEeeCccccCCCcEEEEEECCCCCEEEEec
Confidence            999999999999987         6688999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.80  E-value=3.6e-18  Score=110.18  Aligned_cols=95  Identities=31%  Similarity=0.525  Sum_probs=73.3

Q ss_pred             ceeEEEEecCCCHHHHHHHHHhhhCeEE----------------EEcCeEEEEecCCCC-CccccCCCcceEEEEEeCCH
Q 044588           12 GMKPQLLVEESKATNVVQFYKTTSGAQL----------------EIAGSTFLVSNFSND-SAAAKNMGIGCVLCLEIDDV   74 (117)
Q Consensus        12 ~~~p~L~v~~~D~~~a~~FY~~~fG~~l----------------~~~~~~l~~~~~~~~-g~~~~~~~~~~~l~l~v~dv   74 (117)
                      ++.|+|.|+  |++++.+||+++||.+.                ..++..+++.+..+. +.+....++.++++|.|+|+
T Consensus         2 ~~~~~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~d~   79 (122)
T cd07246           2 TVTPYLIVR--DAAAAIDFYKKAFGAEELERMPDDDGRVMHAELRIGDSVLMLADEFPEHGSPASWGGTPVSLHLYVEDV   79 (122)
T ss_pred             ceeEEEEEC--CHHHHHHHHHHhhCCEEEEEEeCCCCCEEEEEEEECCEEEEEecCCcccCCCCCCCCceEEEEEEeCCH
Confidence            578999999  99999999999999332                234445555543221 11112233678999999999


Q ss_pred             HHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           75 EAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        75 d~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +++++++++.|+++         |.|.++++||+||.|+|++.
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~~l~~~  122 (122)
T cd07246          80 DATFARAVAAGATSVMPPADQFWGDRYGGVRDPFGHRWWIATH  122 (122)
T ss_pred             HHHHHHHHHCCCeEecCcccccccceEEEEECCCCCEEEEecC
Confidence            99999999999987         67899999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PRK10148 hypothetical protein; Provisional

Probab=99.80  E-value=2.7e-18  Score=116.84  Aligned_cols=95  Identities=29%  Similarity=0.450  Sum_probs=69.5

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhCeEEE------------------------------------EcCeEEEEecCCCC
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSGAQLE------------------------------------IAGSTFLVSNFSND   54 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~------------------------------------~~~~~l~~~~~~~~   54 (117)
                      |+++|||.++ +|+++|++||+++||+++.                                    +++..||++|..+ 
T Consensus         1 m~l~pyL~f~-g~a~eAi~FY~~~Fgae~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~Ha~l~i~g~~lm~sD~~~-   78 (147)
T PRK10148          1 MPLSPYLSFA-GNCADAIAYYQQTLGAELLYKISFGEMPKSAQDSEEGCPSGMQFPDTAIAHANVRIAGSDIMMSDAIP-   78 (147)
T ss_pred             CeeEEEEEeC-CCHHHHHHHHHHHhCCEEEEEEEcccCCccccccccCCCccccCcCCcEEEEEEEECCEEEEEECCCC-
Confidence            4689999996 3899999999999994431                                    2233345554322 


Q ss_pred             CccccCCCcceEEEEEeCCHHH---HHHHHHhCCCee---------eceEEEEECCCCCeEEEecccC
Q 044588           55 SAAAKNMGIGCVLCLEIDDVEA---ALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        55 g~~~~~~~~~~~l~l~v~dvd~---~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +.  ...+++++|+|.++|+++   +|+ ++++|+++         |.||++|+||||+.|+|.....
T Consensus        79 ~~--~~~~~~~~l~l~~~d~ee~~~~~~-aLa~gg~v~mpl~~~~wg~~~g~v~D~fGi~W~l~~~~~  143 (147)
T PRK10148         79 SG--KAHYSGFTLVLDTQDVEEGKRWFD-NLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQ  143 (147)
T ss_pred             Cc--CCCCCeEEEEEECCCHHHHHHHHH-HhhCCCEEEecchhcchhhccEEEECCCCCEEEEEecCC
Confidence            11  112257899999998876   556 45788887         7899999999999999988643

>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E

Probab=99.77  E-value=1.4e-17  Score=110.07  Aligned_cols=90  Identities=24%  Similarity=0.424  Sum_probs=66.7

Q ss_pred             eeEEEEecCCCHHHHHHHHHhhhCeE--------------------------EEEcCeEEEEecCCCCCccccCCCcceE
Q 044588           13 MKPQLLVEESKATNVVQFYKTTSGAQ--------------------------LEIAGSTFLVSNFSNDSAAAKNMGIGCV   66 (117)
Q Consensus        13 ~~p~L~v~~~D~~~a~~FY~~~fG~~--------------------------l~~~~~~l~~~~~~~~g~~~~~~~~~~~   66 (117)
                      ++|||.++ +|+++|++||+++||.+                          +++++..|++.+..+ +... ..+++++
T Consensus         1 l~p~L~~~-~~~~eAi~FY~~~fg~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~l~~~d~~~-~~~~-~~~~~~~   77 (128)
T cd06588           1 ITPYLWFN-GNAEEALEFYQSVFGGEITSLTRYGEGPPPDPEEPEGKVMHAELTIGGQRLMASDGGP-GFPF-TFGNGIS   77 (128)
T ss_pred             CeeEEeeC-CCHHHHHHHHHHHhCCEeEEEEEcCCCCCCCCCCcCCcEEEEEEEECCEEEEEEcCCC-CCCC-CCCCCEE
Confidence            57999994 29999999999999922                          334455677766543 1111 2336789


Q ss_pred             EEEEeCC---HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEe
Q 044588           67 LCLEIDD---VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIY  106 (117)
Q Consensus        67 l~l~v~d---vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~  106 (117)
                      +++.|+|   ++++|+++.+ |+++         |.|+++|+||+|+.|+|.
T Consensus        78 l~i~~~~~e~v~~~~~~l~~-~g~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~  128 (128)
T cd06588          78 LSVECDSEEEADRLFEALSE-GGTVLMPLQKTFWSPLFGWVTDRFGVSWQIN  128 (128)
T ss_pred             EEEECCCHHHHHHHHHHHhc-CCeEeccchhcCcccccEEEECCCCCEEEeC
Confidence            9999886   6788998665 5566         779999999999999984

coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to

>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.73  E-value=2e-16  Score=102.13  Aligned_cols=95  Identities=20%  Similarity=0.288  Sum_probs=70.4

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhCeEEEEc----------Ce--EEEEecCCCCCc---cccCCCcceEEEEEeCCHH
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSGAQLEIA----------GS--TFLVSNFSNDSA---AAKNMGIGCVLCLEIDDVE   75 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~----------~~--~l~~~~~~~~g~---~~~~~~~~~~l~l~v~dvd   75 (117)
                      +++.|.|.++  |+++|.+||+++||++....          +.  .+.+........   .....+.+++++|.|+|++
T Consensus         1 ~~~~~~l~v~--D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~v~did   78 (119)
T cd08359           1 TSLYPVIVTD--DLAETADFYVRHFGFTVVFDSDWYVSLRSPDGGVELAFMLPGHETVPAAQYQFQGQGLILNFEVDDVD   78 (119)
T ss_pred             CcceeEEEEC--CHHHHHHHHHHhhCcEEEeccCcEEEEecCCCceEEEEccCCCCCCcchhcccCCceEEEEEEECCHH
Confidence            4688999999  99999999999999654432          22  222222111111   1112346789999999999


Q ss_pred             HHHHHHHhCCCee---------eceEEEEECCCCCeEEEec
Q 044588           76 AALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        76 ~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      ++++++.++|+++         |.|.++++||+||.|+|.+
T Consensus        79 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  119 (119)
T cd08359          79 AEYERLKAEGLPIVLPLRDEPWGQRHFIVRDPNGVLIDIVQ  119 (119)
T ss_pred             HHHHHHHhcCCCeeeccccCCCcceEEEEECCCCCEEEEEC
Confidence            9999999999976         5688999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>PF06983 3-dmu-9_3-mt: 3-demethylubiquinone-9 3-methyltransferase; PDB: 1U7I_A 1TSJ_A 1U69_D 3L20_B 3OMS_A

Probab=99.72  E-value=1.9e-16  Score=103.90  Aligned_cols=90  Identities=31%  Similarity=0.508  Sum_probs=66.6

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhC-----------------------eEEEEcCeEEEEecCCCCCccccCCCcceEE
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSG-----------------------AQLEIAGSTFLVSNFSNDSAAAKNMGIGCVL   67 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG-----------------------~~l~~~~~~l~~~~~~~~g~~~~~~~~~~~l   67 (117)
                      .+++|||.++ +++++|++||+++||                       ++|+++|..+|.+|..+    ....+++++|
T Consensus         1 qki~pyL~F~-g~a~eA~~fY~~vf~~~~i~~~~~~~~~~~~~~~~v~ha~l~i~g~~lm~~D~~~----~~~~~~~~sl   75 (116)
T PF06983_consen    1 QKITPYLWFN-GNAEEALEFYKEVFGGSEIMTFGDYPDDEPEWKDKVMHAELTIGGQKLMASDGGP----DFPFGNNISL   75 (116)
T ss_dssp             -SEEEEEEES-S-HHHHHHHHHHHSTTEEEEEEEE-TTTCTTHTTSEEEEEEEETTEEEEEEEEST----S----TTEEE
T ss_pred             CceEEEEEeC-CCHHHHHHHHHHHcCCCEEEEEeECCCCCCCCCCcEEEEEEEECCeEEEEECCCC----CCCCCCcEEE
Confidence            3789999998 489999999999999                       46777788888887632    1223478999


Q ss_pred             EEEeCCH---HHHHHHHHhCCCeeeceEEEEECCCCCeEEEe
Q 044588           68 CLEIDDV---EAALAKAMSGGVWATGRVGKVKDPCGFTWLIY  106 (117)
Q Consensus        68 ~l~v~dv---d~~~~~~~~~G~~vg~r~~~v~DP~G~~w~l~  106 (117)
                      +|.++|.   +++|++|.+.| +-..+||+|+|+||+.|+|.
T Consensus        76 ~i~~~~~ee~~~~f~~Ls~gG-~~~~~~G~v~DkFGv~Wqiv  116 (116)
T PF06983_consen   76 CIECDDEEEIDRIFDKLSEGG-QWFSRYGWVTDKFGVSWQIV  116 (116)
T ss_dssp             EEEESSHHHHHHHHHHHHTTT-ETCCEEEEEE-TTS-EEEEE
T ss_pred             EEEcCCHHHHHHHHHHHHcCC-CccceeEEEEeCCCCEEEeC
Confidence            9999855   56799876654 44349999999999999985

>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.70  E-value=3.1e-16  Score=101.54  Aligned_cols=88  Identities=25%  Similarity=0.422  Sum_probs=66.6

Q ss_pred             ceeEEEEecCCCHHHHHHHHHhhhCeEE----------EEcCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHHHHH
Q 044588           12 GMKPQLLVEESKATNVVQFYKTTSGAQL----------EIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKA   81 (117)
Q Consensus        12 ~~~p~L~v~~~D~~~a~~FY~~~fG~~l----------~~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~~~~   81 (117)
                      .+.|+|.+.  |++++++||++ ||.++          ..++..+++.....  .   ....+..++|.|+|++++++++
T Consensus         2 ~~~~~l~v~--Dl~~s~~FY~~-LGf~~~~~~~~~~~l~~~~~~l~l~~~~~--~---~~~~~~~~~~~v~did~~~~~l   73 (113)
T cd08356           2 SIRPFIPAK--DFAESKQFYQA-LGFELEWENDNLAYFRLGNCAFYLQDYYV--K---DWAENSMLHLEVDDLEAYYEHI   73 (113)
T ss_pred             cceeccccc--cHHHHHHHHHH-hCCeeEecCCCEEEEEcCCEEEEeecCCC--c---ccccCCEEEEEECCHHHHHHHH
Confidence            578999999  99999999988 89433          33344444433211  1   1114568899999999999999


Q ss_pred             HhCCCee--------------eceEEEEECCCCCeEEEec
Q 044588           82 MSGGVWA--------------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        82 ~~~G~~v--------------g~r~~~v~DP~G~~w~l~~  107 (117)
                      +++|+++              |.|.++++||+||.|+|.+
T Consensus        74 ~~~G~~~~~~~~~~~~~~~~~g~r~f~~~DPdGn~~~~~~  113 (113)
T cd08356          74 KALGLPKKFPGVKLPPITQPWWGREFFLHDPSGVLWHIGQ  113 (113)
T ss_pred             HHcCCcccccceecCccccCCCcEEEEEECCCccEEEeeC
Confidence            9999641              7799999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.69  E-value=9.8e-16  Score=99.45  Aligned_cols=95  Identities=19%  Similarity=0.140  Sum_probs=67.9

Q ss_pred             ceeEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEE------EecCC----CC-CccccCCCcceEEEEEeCCHHHHHH
Q 044588           12 GMKPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFL------VSNFS----ND-SAAAKNMGIGCVLCLEIDDVEAALA   79 (117)
Q Consensus        12 ~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~------~~~~~----~~-g~~~~~~~~~~~l~l~v~dvd~~~~   79 (117)
                      ...|.|.|+  |+++|++||+++||.+.... +....      +....    .. ..+....+.+.+++|.|+|+|++++
T Consensus         3 ~~~~~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~v~dvd~~~~   80 (120)
T cd09011           3 FKNPLLVVK--DIEKSKKFYEKVLGLKVVMDFGENVTFEGGFALQEGYSWLEGISKADIIEKSNNFELYFEEEDFDAFLD   80 (120)
T ss_pred             EEEEEEEEC--CHHHHHHHHHHhcCCEEeeccCceEEEeccceeccchhhhccCCcccccccCCceEEEEEehhhHHHHH
Confidence            346888998  99999999999999665432 11111      11000    00 0111122356899999999999999


Q ss_pred             HHHhCCC-ee---------eceEEEEECCCCCeEEEecc
Q 044588           80 KAMSGGV-WA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        80 ~~~~~G~-~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +++++|+ ++         |.|.++++||+||.|+|.++
T Consensus        81 ~l~~~g~~~~~~~~~~~~~g~r~~~~~DPdGn~iei~~~  119 (120)
T cd09011          81 KLKRYDNIEYVHPIKEHPWGQRVVRFYDPDKHIIEVGES  119 (120)
T ss_pred             HHHhcCCcEEecCcccCCCccEEEEEECCCCCEEEEecc
Confidence            9999986 44         67899999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins

Probab=99.69  E-value=9.4e-16  Score=99.63  Aligned_cols=90  Identities=19%  Similarity=0.140  Sum_probs=67.6

Q ss_pred             ceeEEEEecCCCHHHHHHHHHhhhCeEEEEc-----------CeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHHHH
Q 044588           12 GMKPQLLVEESKATNVVQFYKTTSGAQLEIA-----------GSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAK   80 (117)
Q Consensus        12 ~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-----------~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~~~   80 (117)
                      +++|.|.++  |+++|++||++ ||.++...           +..+++....  .  ..+.....++++.|+|+++.+++
T Consensus         3 ~~~~~l~v~--Dl~~s~~FY~~-lG~~~~~~~~~~~~~~~~~~~~l~l~~~~--~--~~~~~~~~~~~~~v~dvd~~~~~   75 (120)
T cd08350           3 TTIPNLPSR--DLDATEAFYAR-LGFSVGYRQAAGYMILRRGDLELHFFAHP--D--LDPATSPFGCCLRLPDVAALHAE   75 (120)
T ss_pred             cccceeEcC--CHHHHHHHHHH-cCCEEEecCCCCEEEEEcCCEEEEEEecC--c--CCCCCCcceEEEEeCCHHHHHHH
Confidence            678999999  99999999999 99554432           2223332211  0  11112456889999999999999


Q ss_pred             HHhCCCe--------e--------eceEEEEECCCCCeEEEecc
Q 044588           81 AMSGGVW--------A--------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        81 ~~~~G~~--------v--------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +.++|++        +        |.|.++++||+||.|+|.++
T Consensus        76 l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~~~  119 (120)
T cd08350          76 FRAAGLPETGSGIPRITPPEDQPWGMREFALVDPDGNLLRFGQP  119 (120)
T ss_pred             HHHhCccccccCCCcccCCcCCCCceeEEEEECCCCCEEEeecC
Confidence            9999986        2        56889999999999999875

BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.

>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.68  E-value=2.2e-15  Score=97.67  Aligned_cols=93  Identities=25%  Similarity=0.340  Sum_probs=66.7

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE------------cCeEEEEecCCC------CCc--c-ccCCCcceEEEEEeC
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI------------AGSTFLVSNFSN------DSA--A-AKNMGIGCVLCLEID   72 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~------------~~~~l~~~~~~~------~g~--~-~~~~~~~~~l~l~v~   72 (117)
                      ...|.|+  |++++.+||+++||.+...            ++..+.+.....      .+.  . ....+.+++++|.|+
T Consensus         3 ~~~l~v~--D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~   80 (125)
T cd07264           3 YTIIYVE--DVEKTLEFYERAFGFERRFLHESGDYGELETGETTLAFASHDLAESNLKGGFVKADPAQPPAGFEIAFVTD   80 (125)
T ss_pred             eEEEEEc--CHHHHHHHHHHhhCCeEEeecCCCcEEEecCCcEEEEEEcccccccccccCccCCccccCCCcEEEEEEcC
Confidence            4567777  9999999999999965432            122233322110      010  0 111235689999999


Q ss_pred             CHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           73 DVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        73 dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      |+++++++++++|+++         |.+.++++||+||.|+|.++
T Consensus        81 di~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  125 (125)
T cd07264          81 DVAAAFARAVEAGAVLVSEPKEKPWGQTVAYVRDINGFLIELCSP  125 (125)
T ss_pred             CHHHHHHHHHHcCCEeccCCccCCCCcEEEEEECCCCCEEEEecC
Confidence            9999999999999977         56789999999999999875

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.66  E-value=3.4e-15  Score=95.59  Aligned_cols=95  Identities=25%  Similarity=0.283  Sum_probs=69.2

Q ss_pred             ceeEEEEecCCCHHHHHHHHHhhhCeEEEEcCeEEE-Eec-CC-CC--Cc-c-ccCCCcceEEEEEeCCHHHHHHHHHhC
Q 044588           12 GMKPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFL-VSN-FS-ND--SA-A-AKNMGIGCVLCLEIDDVEAALAKAMSG   84 (117)
Q Consensus        12 ~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~~~~l~-~~~-~~-~~--g~-~-~~~~~~~~~l~l~v~dvd~~~~~~~~~   84 (117)
                      ++.|.|.++  |++++++||+++||.++......+. +.. .. ..  .. . ........++++.|+|+++++++++++
T Consensus         1 ~~~~~l~v~--Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~v~d~~~~~~~l~~~   78 (112)
T cd07238           1 RIVPNLPVA--DPEAAAAFYADVLGLDVVMDHGWIATFASPQNMTVQVSLATEGGTATVVPDLSIEVDDVDAALARAVAA   78 (112)
T ss_pred             CccceEecC--CHHHHHHHHHHhcCceEEEcCCceEEEeecCCCCcEEEEecCCCCCCCCCEEEEEeCCHHHHHHHHHhc
Confidence            467999999  9999999999999977654432222 211 10 00  00 0 011113468999999999999999999


Q ss_pred             CCee---------eceEEEEECCCCCeEEEecc
Q 044588           85 GVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        85 G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      |+++         |.+.++++||+||.|+|+++
T Consensus        79 G~~~~~~~~~~~~g~~~~~~~DP~Gn~i~~~~~  111 (112)
T cd07238          79 GFAIVYGPTDEPWGVRRFFVRDPFGKLVNILTH  111 (112)
T ss_pred             CCeEecCCccCCCceEEEEEECCCCCEEEEEEc
Confidence            9987         45788999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.

>cd08349 BLMA_like Bleomycin binding protein (BLMA) and similar proteins; BLMA confers bleomycin (Bm) resistance by directly binding to Bm

Probab=99.64  E-value=1.1e-14  Score=92.55  Aligned_cols=90  Identities=23%  Similarity=0.342  Sum_probs=66.2

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc------------CeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHHHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA------------GSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKA   81 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~------------~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~~~~   81 (117)
                      +|.|.++  |++++++||+++||+++...            +..+.+....  +........++++++.++|++++++++
T Consensus         1 ~~~i~v~--d~~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l   76 (112)
T cd08349           1 VPVLPVS--DIERSLAFYRDVLGFEVDWEHPEPGYAFLSRGGAQLMLSEHD--GDEPVPLGRGGSVYIEVEDVDALYAEL   76 (112)
T ss_pred             CCEEEEC--CHHHHHHHHHhccCeEEEEEcCCCcEEEEEeCCEEEEEeccC--CCCCCCCCCcEEEEEEeCCHHHHHHHH
Confidence            4789999  99999999999999554322            2223322211  111101236678999999999999999


Q ss_pred             HhCCCe-e---------eceEEEEECCCCCeEEEec
Q 044588           82 MSGGVW-A---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        82 ~~~G~~-v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      .++|++ +         |.+..+++||+|+.|+|++
T Consensus        77 ~~~G~~~~~~~~~~~~~g~~~~~~~DP~G~~ie~~~  112 (112)
T cd08349          77 KAKGADLIVYPPEDQPWGMREFAVRDPDGNLLRFGE  112 (112)
T ss_pred             HHcCCcceecCccCCCcccEEEEEECCCCCEEEecC
Confidence            999998 3         4588899999999999975

BLMA also called Bleomycin resistance protein, confers Bm resistance by directly binding to Bm. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMA is produced by actinomycetes to protect themselves against their own lethal compound. BLMA has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMAs are dimers and each dimer binds to two Bm molecules at the Bm-binding pockets formed at the dimer interface; two Bm molecules are bound per dimer. BLMA belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. As for the large

>COG3324 Predicted enzyme related to lactoylglutathione lyase [General function prediction only]

Probab=99.60  E-value=3.5e-14  Score=94.22  Aligned_cols=89  Identities=24%  Similarity=0.368  Sum_probs=67.4

Q ss_pred             CCCHHHHHHHHHhhhCeEEEEc----CeEEEEe-cCCC--CCc----cccCC-CcceEEEEEeCCHHHHHHHHHhCCCee
Q 044588           21 ESKATNVVQFYKTTSGAQLEIA----GSTFLVS-NFSN--DSA----AAKNM-GIGCVLCLEIDDVEAALAKAMSGGVWA   88 (117)
Q Consensus        21 ~~D~~~a~~FY~~~fG~~l~~~----~~~l~~~-~~~~--~g~----~~~~~-~~~~~l~l~v~dvd~~~~~~~~~G~~v   88 (117)
                      ++|+++|++||+++||+.+.-.    +.....+ ...+  .|.    +...+ ++++.++|.|+|+|++.+|+.++|++|
T Consensus        17 ~~D~~ra~~FY~~vFgW~~~~~~~~~~~~y~~f~~~~~~~gG~l~~~~~~~p~~~~~~iy~~v~did~~l~rv~~~GG~V   96 (127)
T COG3324          17 VSDLERAKAFYEKVFGWTFEDYFDMGEMRYAVFPADGAGAGGGLMARPGSPPGGGGWVIYFAVDDIDATLERVVAAGGKV   96 (127)
T ss_pred             cCCHHHHHHHHHHhhCceecccccCCCceEEEEECCCccccceeccCCcCCCCCCCEEEEEecCChHHHHHHHHhcCCeE
Confidence            3499999999999999877533    2333332 1111  111    11122 578999999999999999999999988


Q ss_pred             ---------eceEEEEECCCCCeEEEeccc
Q 044588           89 ---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        89 ---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                               ++|++.+.||.||.+.|+++.
T Consensus        97 ~~p~~~~p~~G~~a~~~Dp~Gn~~~l~s~~  126 (127)
T COG3324          97 LRPKTEFPGGGRIAHFVDPEGNRFGLWSPA  126 (127)
T ss_pred             EecccccCCceEEEEEECCCCCEEEEeecC
Confidence                     579999999999999999864

>cd07261 Glo_EDI_BRP_like_11 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.59  E-value=6.5e-14  Score=89.75  Aligned_cols=90  Identities=24%  Similarity=0.303  Sum_probs=62.6

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE----------Ec-CeEEEEecCCCCCccccCCCcceEEEEEeCC---HHHHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE----------IA-GSTFLVSNFSNDSAAAKNMGIGCVLCLEIDD---VEAALAKA   81 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~----------~~-~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~d---vd~~~~~~   81 (117)
                      .|.|+  |.++|++||+++||.++.          .. +..+.+.............+.+.+++|.+++   ++++++++
T Consensus         3 ~l~v~--d~~~a~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~   80 (114)
T cd07261           3 LLYVE--DPAASAEFYSELLGREPVELSPTFALFVLGSGVKLGLWSRHTVEPASDATGGGSELAFMVDDGAAVDALYAEW   80 (114)
T ss_pred             EEEEC--CHHHHHHHHHHHcCCCccCCCCceEEEEeCCCcEEEEeeccccCCCCCCCCCceEEEEEcCCHHHHHHHHHHH
Confidence            46777  999999999999994332          22 2233333221111111122256789999975   88999999


Q ss_pred             HhCCCee--------eceEEEEECCCCCeEEEec
Q 044588           82 MSGGVWA--------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        82 ~~~G~~v--------g~r~~~v~DP~G~~w~l~~  107 (117)
                      .++|+++        .++.++++||+||.|+|++
T Consensus        81 ~~~g~~v~~~~~~~~~g~~~~~~DPdGn~ie~~~  114 (114)
T cd07261          81 QAKGVKIIQEPTEMDFGYTFVALDPDGHRLRVFA  114 (114)
T ss_pred             HHCCCeEecCccccCCccEEEEECCCCCEEEeeC
Confidence            9999988        2477899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS)

Probab=99.59  E-value=6.9e-14  Score=93.07  Aligned_cols=95  Identities=17%  Similarity=0.202  Sum_probs=67.3

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE--------------cCeEEEEecCCC-CCc-c---ccCCCcceEEEEEeCCHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI--------------AGSTFLVSNFSN-DSA-A---AKNMGIGCVLCLEIDDVE   75 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~--------------~~~~l~~~~~~~-~g~-~---~~~~~~~~~l~l~v~dvd   75 (117)
                      ..|.|+  |++++++||+++||.++..              ++..+++..... .+. .   ...+....+++|.|+|++
T Consensus         4 i~i~V~--D~e~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~hia~~V~Dvd   81 (136)
T cd08342           4 VEFYVG--NAKQLASWFSTKLGFEPVAYHGSEDKASYLLRQGDINFVLNSPLNSFAPVADFLEKHGDGVCDVAFRVDDAA   81 (136)
T ss_pred             EEEEeC--CHHHHHHHHHHhcCCeEEEecCCCceEEEEEEcCCEEEEEecCCCCCCchHHHHHhcCCceEEEEEEeCCHH
Confidence            456777  9999999999999954422              112233322111 010 0   011223468999999999


Q ss_pred             HHHHHHHhCCCee---------eceEEEEECCCCCeEEEecccCC
Q 044588           76 AALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        76 ~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      ++++++.++|+++         |.|.++++||+|++|+|.+....
T Consensus        82 a~~~~l~~~G~~v~~~p~~~~~~~~~~~i~dp~G~~ie~~~~~~~  126 (136)
T cd08342          82 AAYERAVARGAKPVQEPVEEPGELKIAAIKGYGDSLHTLVDRKGY  126 (136)
T ss_pred             HHHHHHHHcCCeEccCceecCCeEEEEEEeccCCcEEEEEecCCC
Confidence            9999999999998         56899999999999999997643

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su

>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A

Probab=99.58  E-value=3.2e-14  Score=90.04  Aligned_cols=88  Identities=22%  Similarity=0.171  Sum_probs=61.3

Q ss_pred             EEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCC----------CCCccccCCCcceEEEEEeCCHHHHHHHHHhCC
Q 044588           17 LLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFS----------NDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGG   85 (117)
Q Consensus        17 L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~----------~~g~~~~~~~~~~~l~l~v~dvd~~~~~~~~~G   85 (117)
                      |.++  |+++|.+||+++||.+.... +....+....          .............+++|.|+|++++++++.++|
T Consensus         1 l~v~--d~~~a~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dv~~~~~~l~~~G   78 (108)
T PF12681_consen    1 LPVS--DLEAAAAFYEDVLGFEVVFDDPDYVDFSLGFRFHDGVIEFLQFPDPPGPPGGGFHLCFEVEDVDALYERLKELG   78 (108)
T ss_dssp             EEES--SHHHHHHHHHHTTTSEEEEEETSEEEEEETEEEEEEEEEEEEEESSSSSSSSEEEEEEEESHHHHHHHHHHHTT
T ss_pred             CccC--CHHHHHHHHHHhcCCEEEEeCCCeEEEEeccchhhhhHHHccCCccccCCCceeEEEEEEcCHHHHHHHHHHCC
Confidence            5677  99999999999999555432 1111111000          000011223367899999999999999999999


Q ss_pred             Cee---------eceEEEEECCCCCeEEEe
Q 044588           86 VWA---------TGRVGKVKDPCGFTWLIY  106 (117)
Q Consensus        86 ~~v---------g~r~~~v~DP~G~~w~l~  106 (117)
                      +++         |.+.++++||+||.|+|+
T Consensus        79 ~~~~~~~~~~~~g~~~~~~~DPdG~~ie~~  108 (108)
T PF12681_consen   79 AEIVTEPRDDPWGQRSFYFIDPDGNRIEFC  108 (108)
T ss_dssp             SEEEEEEEEETTSEEEEEEE-TTS-EEEEE
T ss_pred             CeEeeCCEEcCCCeEEEEEECCCCCEEEeC
Confidence            987         568999999999999985

...

>cd07235 MRD Mitomycin C resistance protein (MRD)

Probab=99.57  E-value=9.6e-14  Score=89.93  Aligned_cols=88  Identities=19%  Similarity=0.253  Sum_probs=60.7

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeE------------EEEc-CeEEEEecCCCC----CccccCCCcceEEEEEe---CCHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQ------------LEIA-GSTFLVSNFSND----SAAAKNMGIGCVLCLEI---DDVE   75 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~------------l~~~-~~~l~~~~~~~~----g~~~~~~~~~~~l~l~v---~dvd   75 (117)
                      .|.|+  |+++|++||++ ||.+            +..+ +..+++......    .......+...++++.+   +|++
T Consensus         5 ~l~V~--D~~~a~~FY~~-LGf~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dvd   81 (122)
T cd07235           5 GIVVA--DMAKSLDFYRR-LGFDFPEEADDEPHVEAVLPGGVRLAWDTVESIRSFTPGWTPTGGHRIALAFLCETPAEVD   81 (122)
T ss_pred             EEEec--cHHHHHHHHHH-hCceecCCcCCCCcEEEEeCCCEEEEEEcccceeeecCCCCCCCCCcEEEEEEcCCHHHHH
Confidence            46677  99999999975 8933            3333 344554332110    01111222456777765   4899


Q ss_pred             HHHHHHHhCCCee---------eceEEEEECCCCCeEEEe
Q 044588           76 AALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIY  106 (117)
Q Consensus        76 ~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~  106 (117)
                      ++++++.++|+++         |.++++++||+||.|+|+
T Consensus        82 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  121 (122)
T cd07235          82 ALYAELVGAGYPGHKEPWDAPWGQRYAIVKDPDGNLVDLF  121 (122)
T ss_pred             HHHHHHHHCCCCcCCCCccCCCCCEEEEEECCCCCEEEEe
Confidence            9999999999876         668899999999999986

Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.

>cd07247 SgaA_N_like N-terminal domain of Streptomyces griseus SgaA (suppression of growth disturbance caused by A-factor at a high concentration under high osmolality during early growth phase), and similar domains

Probab=99.56  E-value=2.2e-13  Score=87.11  Aligned_cols=91  Identities=23%  Similarity=0.300  Sum_probs=65.1

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEcC---e-EEEEecCC-C-C-----CccccCCCcceEEEEEeCCHHHHHHHHHh
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIAG---S-TFLVSNFS-N-D-----SAAAKNMGIGCVLCLEIDDVEAALAKAMS   83 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~~---~-~l~~~~~~-~-~-----g~~~~~~~~~~~l~l~v~dvd~~~~~~~~   83 (117)
                      ..|.++  |++++++||+++||.++....   . ..++.... . .     .......+.+.+++|.++|+++.++++++
T Consensus         4 i~l~v~--d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~v~di~~~~~~l~~   81 (114)
T cd07247           4 FELPTT--DPERAKAFYGAVFGWTFEDMGDGGGDYAVFSTGGGAVGGLMKAPEPAAGSPPGWLVYFAVDDVDAAAARVEA   81 (114)
T ss_pred             EEeeCC--CHHHHHHHHHhccCceeeeccCCCCceEEEEeCCccEEEEecCCCCCCCCCCeEEEEEEeCCHHHHHHHHHH
Confidence            345666  999999999999996654332   2 22222110 0 0     00001234678999999999999999999


Q ss_pred             CCCee---------eceEEEEECCCCCeEEEec
Q 044588           84 GGVWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        84 ~G~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      +|+++         +.+.++++||+||.|+|++
T Consensus        82 ~g~~~~~~~~~~~~~~~~~~~~DPdG~~~~l~~  114 (114)
T cd07247          82 AGGKVLVPPTDIPGVGRFAVFADPEGAVFGLWQ  114 (114)
T ss_pred             CCCEEEeCCcccCCcEEEEEEECCCCCEEEeEC
Confidence            99987         3578899999999999975

SgaA suppresses the growth disturbances caused by high osmolarity and a high concentration of A-factor, a microbial hormone, during the early growth phase in Streptomyces griseus. A-factor (2-isocapryloyl-3R-hydroxymethyl-gamma-butyrolactone) controls morphological differentiation and secondary metabolism in Streptomyces griseus. It is a chemical signaling molecule that at a very low concentration acts as a switch for yellow pigment production, aerial mycelium formation, streptomycin production, and streptomycin resistance. The structure and amino acid sequence of SgaA are closely related to a group of antibiotics resistance proteins, including bleomycin resistance protein, mitomycin resistance protein, and fosfomycin resistance proteins. SgaA might also function as a strep

>COG3865 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=99.52  E-value=3.3e-13  Score=90.53  Aligned_cols=96  Identities=20%  Similarity=0.330  Sum_probs=75.1

Q ss_pred             CCcceeEEEEecCCCHHHHHHHHHhhhC------------------------eEEEEcCeEEEEecCCCCCccccCCCcc
Q 044588            9 NFMGMKPQLLVEESKATNVVQFYKTTSG------------------------AQLEIAGSTFLVSNFSNDSAAAKNMGIG   64 (117)
Q Consensus         9 ~~~~~~p~L~v~~~D~~~a~~FY~~~fG------------------------~~l~~~~~~l~~~~~~~~g~~~~~~~~~   64 (117)
                      -+.+++|+|.++ ++.++|.+||.++|-                        ++++++|..++..+..+ ..... -...
T Consensus         2 ~~~kit~~L~F~-~~AeeA~~fY~s~FpdS~i~~i~r~p~~~~~g~~G~Vl~a~F~l~g~~f~~ld~g~-~~~f~-fneA   78 (151)
T COG3865           2 MMPKITPFLWFD-GNAEEAMNFYLSTFPDSKIIGITRYPEGEPGGKEGKVLVAEFTLNGQSFMALDGGP-NTSFK-FNEA   78 (151)
T ss_pred             CCCcceeEEEEC-CcHHHHHHHHHHhCCcceeeeeeecCCCCCCCCCccEEEEEEEECCeEEEEEcCCC-CcCCC-cCcc
Confidence            467899999998 489999999999998                        56667777777666543 11111 1267


Q ss_pred             eEEEEEeC---CHHHHHHHHHhCCCeeeceEEEEECCCCCeEEEecc
Q 044588           65 CVLCLEID---DVEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        65 ~~l~l~v~---dvd~~~~~~~~~G~~vg~r~~~v~DP~G~~w~l~~~  108 (117)
                      +++.+.++   ++|+.|+++++.|++. .++++++|++|+.|+|.-+
T Consensus        79 ~S~~v~~~~q~E~Drlwnal~~~g~e~-~~cgW~kDKfGVSWQi~p~  124 (151)
T COG3865          79 FSFQVACDDQEEIDRLWNALSDNGGEA-EACGWLKDKFGVSWQIVPR  124 (151)
T ss_pred             EEEEEEcCCHHHHHHHHHHHhccCcch-hcceeEecccCcEEEEcHH
Confidence            88888887   5678999999999774 7899999999999999754

>PRK11478 putative lyase; Provisional

Probab=99.49  E-value=1.4e-12  Score=85.11  Aligned_cols=92  Identities=22%  Similarity=0.310  Sum_probs=62.2

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE----------------cCe-EEEEecCC-CCCccccCCCcc-eEEEEEeCCHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI----------------AGS-TFLVSNFS-NDSAAAKNMGIG-CVLCLEIDDVE   75 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~----------------~~~-~l~~~~~~-~~g~~~~~~~~~-~~l~l~v~dvd   75 (117)
                      ..|.|+  |++++++||+++||.++..                ++. .+.+.... +.+.+......+ .+++|.|+|++
T Consensus        10 v~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~v~d~~   87 (129)
T PRK11478         10 IAIIAT--DYAVSKAFYCDILGFTLQSEVYREARDSWKGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDID   87 (129)
T ss_pred             EEEEcC--CHHHHHHHHHHHhCCEecccccccccccceeeEecCCCcEEEEEEecCCCCCCCCCCCCceeEEEEEeCCHH
Confidence            355666  9999999999999955421                111 11111110 111111111123 48999999999


Q ss_pred             HHHHHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           76 AALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        76 ~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++++++.++|+++         |.++.+++||+||.|+|.+.
T Consensus        88 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iEl~~~  129 (129)
T PRK11478         88 AAVAHLESHNVKCEAIRVDPYTQKRFTFFNDPDGLPLELYEQ  129 (129)
T ss_pred             HHHHHHHHcCCeeeccccCCCCCCEEEEEECCCCCEEEEEeC
Confidence            9999999999986         45788999999999999863

>cd07263 Glo_EDI_BRP_like_16 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.49  E-value=1.8e-12  Score=82.53  Aligned_cols=90  Identities=22%  Similarity=0.321  Sum_probs=62.6

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc-----Ce-E------------EEEecCCCC-CccccCCCcceEEEEEeCCHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA-----GS-T------------FLVSNFSND-SAAAKNMGIGCVLCLEIDDVEA   76 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~-----~~-~------------l~~~~~~~~-g~~~~~~~~~~~l~l~v~dvd~   76 (117)
                      .|.+.  |++++.+||+++||.++...     +. .            +++...... .......+...++++.|+|+++
T Consensus         3 ~l~v~--d~~~~~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~di~~   80 (119)
T cd07263           3 SLYVD--DQDKALAFYTEKLGFEVREDVPMGGGFRWVTVAPPGSPETSLVLAPPANPAAMSGLQPGGTPGLVLATDDIDA   80 (119)
T ss_pred             eEEeC--CHHHHHHHHHhccCeEEEEeeccCCCcEEEEEeCCCCCeeEEEEeCCCCccccccccCCCceEEEEEehHHHH
Confidence            45677  99999999999999554321     11 1            222111100 0000112345689999999999


Q ss_pred             HHHHHHhCCCee--------eceEEEEECCCCCeEEEec
Q 044588           77 ALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        77 ~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~  107 (117)
                      +++++.++|+++        +.+.++++||+||.|+|++
T Consensus        81 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~  119 (119)
T cd07263          81 TYEELKARGVEFSEEPREMPYGTVAVFRDPDGNLFVLVQ  119 (119)
T ss_pred             HHHHHHhCCCEEeeccccCCCceEEEEECCCCCEEEEeC
Confidence            999999999988        4578999999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione

Probab=99.48  E-value=1.4e-12  Score=83.85  Aligned_cols=89  Identities=22%  Similarity=0.188  Sum_probs=60.8

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE----cC--eE-EEEecCC----C-------CC--ccccCCCcceEEEEEeCCHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI----AG--ST-FLVSNFS----N-------DS--AAAKNMGIGCVLCLEIDDVE   75 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~----~~--~~-l~~~~~~----~-------~g--~~~~~~~~~~~l~l~v~dvd   75 (117)
                      .|.++  |+++|.+||+++||.++..    .+  .. ..+....    .       .+  .+.....+..++++.++|+|
T Consensus         5 ~i~v~--d~~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~v~did   82 (121)
T cd07233           5 MLRVK--DLEKSLDFYTDVLGMKLLRRKDFPEGKFTLVFLGYPDEDSEGVLELTYNWGTEEPYDNGNGFGHLAFAVDDVY   82 (121)
T ss_pred             EEEec--CcHHHHHHHHhccCCeEEEEEecCCCceEEEEecCCCCCCccEEEEEecCCCCCCcCCCCCeEEEEEEeCCHH
Confidence            45666  9999999999999955432    11  11 1121110    0       00  00111113368999999999


Q ss_pred             HHHHHHHhCCCee--------eceEEEEECCCCCeEEEe
Q 044588           76 AALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIY  106 (117)
Q Consensus        76 ~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~  106 (117)
                      +++++++++|+++        +.++++++||+||.|+|+
T Consensus        83 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DpdG~~iE~~  121 (121)
T cd07233          83 AACERLEEMGVEVTKPPGDGGMKGIAFIKDPDGYWIELI  121 (121)
T ss_pred             HHHHHHHHCCCEEeeCCccCCCceEEEEECCCCCEEEeC
Confidence            9999999999988        457889999999999984

Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly

>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=6.7e-13  Score=85.81  Aligned_cols=90  Identities=17%  Similarity=0.117  Sum_probs=60.2

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE----------EcCeEEEEecCC-CCC---cccc----CCCcceEEEEEeCCHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE----------IAGSTFLVSNFS-NDS---AAAK----NMGIGCVLCLEIDDVEAA   77 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~----------~~~~~l~~~~~~-~~g---~~~~----~~~~~~~l~l~v~dvd~~   77 (117)
                      .|.|+  |++++++||+++||.++.          .++..+++.... ...   ....    .....+.+++.++|++++
T Consensus         4 ~l~v~--Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~dv~~~   81 (125)
T cd08357           4 AIPVR--DLEAARAFYGDVLGCKEGRSSETWVDFDFFGHQLVAHLSPNFNADASDNAVDGHPVPVPHFGLILSEEEFDAL   81 (125)
T ss_pred             EEEeC--CHHHHHHHHHHhcCCEEeeccCCcccccccCcEEEEEeccCCCcccccCCCCCCccCCceEEEEEeHHHHHHH
Confidence            35566  999999999999995442          223344432111 100   0000    011334567788999999


Q ss_pred             HHHHHhCCCee-------------eceEEEEECCCCCeEEEec
Q 044588           78 LAKAMSGGVWA-------------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        78 ~~~~~~~G~~v-------------g~r~~~v~DP~G~~w~l~~  107 (117)
                      ++++.++|+++             +.+.++++||+||.|+|.+
T Consensus        82 ~~~l~~~g~~~~~~p~~~~~~~~~~~~~~~~~DPdG~~iE~~~  124 (125)
T cd08357          82 AERLEAAGVEFLIEPYTRFEGQPGEQETFFLKDPSGNALEFKA  124 (125)
T ss_pred             HHHHHHCCCcEecCcceeccCCcCceeEEEEECCCCCEEEEee
Confidence            99999999877             1367899999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.48  E-value=1.4e-12  Score=85.02  Aligned_cols=92  Identities=16%  Similarity=0.190  Sum_probs=62.2

Q ss_pred             eeEEEEecCCCHHHHHHHHHhhhCeEEE------------Ec-CeEEEEecCCC---C-Cccc--cCCCcceEEEEEeC-
Q 044588           13 MKPQLLVEESKATNVVQFYKTTSGAQLE------------IA-GSTFLVSNFSN---D-SAAA--KNMGIGCVLCLEID-   72 (117)
Q Consensus        13 ~~p~L~v~~~D~~~a~~FY~~~fG~~l~------------~~-~~~l~~~~~~~---~-g~~~--~~~~~~~~l~l~v~-   72 (117)
                      +...|.|+  |+++|++||++ ||.++.            .+ +..+++.....   . ..+.  ..++...+++|.|+ 
T Consensus         2 ~~v~l~V~--Dl~~s~~FY~~-lGf~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~l~f~v~~   78 (124)
T cd09012           2 IFINLPVK--DLEKSTAFYTA-LGFEFNPQFSDEKAACMVISDNIFVMLLTEDFFQTFTPKPIADTKKSTEVLISLSADS   78 (124)
T ss_pred             EEEEeecC--CHHHHHHHHHH-CCCEEccccCCCCeEEEEECCceEEEEEcHHHHhhccCCCcccCCCCCeEEEEEeCCC
Confidence            35567788  99999999987 894432            22 22344433211   0 0000  11224578999997 


Q ss_pred             --CHHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEec
Q 044588           73 --DVEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        73 --dvd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~  107 (117)
                        |+|++++++.++|+++        +.+.++++||+||.|+|+.
T Consensus        79 ~~~vd~~~~~l~~~G~~i~~~p~~~~~~~~~~~~DPdG~~ie~~~  123 (124)
T cd09012          79 REEVDELVEKALAAGGKEFREPQDHGFMYGRSFADLDGHLWEVLW  123 (124)
T ss_pred             HHHHHHHHHHHHHCCCcccCCcccCCceEEEEEECCCCCEEEEEE
Confidence              6889999999999987        3356789999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07245 Glo_EDI_BRP_like_9 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.47  E-value=2.1e-12  Score=81.16  Aligned_cols=87  Identities=21%  Similarity=0.181  Sum_probs=59.2

Q ss_pred             EEecCCCHHHHHHHHHhhhCeEEEE-------------cCe-EEEEecCCCCCccccCCCcceEEEEEeCCHHHHHHHHH
Q 044588           17 LLVEESKATNVVQFYKTTSGAQLEI-------------AGS-TFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAM   82 (117)
Q Consensus        17 L~v~~~D~~~a~~FY~~~fG~~l~~-------------~~~-~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~~~~~   82 (117)
                      |.++  |++++.+||+++||..+..             ++. .+.+.............+...+++|.|+|++++++++.
T Consensus         6 l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~~l~   83 (114)
T cd07245           6 LRVP--DLEASRAFYTDVLGLEEGPRPPFLFPGAWLYAGDGPQLHLIEEDPPDALPEGPGRDDHIAFRVDDLDAFRARLK   83 (114)
T ss_pred             EecC--CHHHHHHHHHHccCCcccCcCCCCCCceEEEeCCCcEEEEEecCCCccccCCCcccceEEEEeCCHHHHHHHHH
Confidence            4555  9999999999999944321             111 22222111100000112244689999999999999999


Q ss_pred             hCCCee--------eceEEEEECCCCCeEEE
Q 044588           83 SGGVWA--------TGRVGKVKDPCGFTWLI  105 (117)
Q Consensus        83 ~~G~~v--------g~r~~~v~DP~G~~w~l  105 (117)
                      ++|+++        +.+.++++||+|+.|+|
T Consensus        84 ~~g~~~~~~~~~~~~~~~~~~~DP~G~~iE~  114 (114)
T cd07245          84 AAGVPYTESDVPGDGVRQLFVRDPDGNRIEL  114 (114)
T ss_pred             HcCCCcccccCCCCCccEEEEECCCCCEEeC
Confidence            999988        34678999999999985

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases.

>cd08345 Fosfomycin_RP Fosfomycin resistant protein; inhibits the biological function of fosfomycin

Probab=99.46  E-value=1.3e-12  Score=83.37  Aligned_cols=87  Identities=21%  Similarity=0.248  Sum_probs=59.9

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE----------cCeEEEEecCCCCCccccCCCcceEEEEEe--CCHHHHHHHHHh
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI----------AGSTFLVSNFSNDSAAAKNMGIGCVLCLEI--DDVEAALAKAMS   83 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~----------~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v--~dvd~~~~~~~~   83 (117)
                      .|.|+  |++++++||+++||.++..          ++..+.+... + .... ..+...++.|.|  +|++++++++.+
T Consensus         3 ~l~v~--d~~~s~~Fy~~~lg~~~~~~~~~~~~~~~~~~~l~~~~~-~-~~~~-~~~~~~hiaf~v~~~d~~~~~~~l~~   77 (113)
T cd08345           3 TLIVK--DLNKSIAFYRDILGAELIYSSSKEAYFELAGLWICLMEE-D-SLQG-PERTYTHIAFQIQSEEFDEYTERLKA   77 (113)
T ss_pred             eEEEC--CHHHHHHHHHHhcCCeeeeccCceeEEEecCeEEEeccC-C-CcCC-CCCCccEEEEEcCHHHHHHHHHHHHH
Confidence            46677  9999999999999954432          2222333221 1 1111 111223666666  589999999999


Q ss_pred             CCCee---------eceEEEEECCCCCeEEEec
Q 044588           84 GGVWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        84 ~G~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      +|+++         +.+.++++||+||.|+|++
T Consensus        78 ~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEi~~  110 (113)
T cd08345          78 LGVEMKPERPRVQGEGRSIYFYDPDGHLLELHA  110 (113)
T ss_pred             cCCccCCCccccCCCceEEEEECCCCCEEEEEe
Confidence            99987         3578899999999999985

This family contains three types of fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. The three types of fosfomycin resistance proteins, employ different mechanisms to render fosfomycin [(1R,2S)-epoxypropylphosphonic acid] inactive. FosB catalyzes the addition of L-cysteine to the epoxide ring of fosfomycin. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1. FosA catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive. Catalytic activities of both FosX and FosA are Mn(II)-dependent, but FosB is activated by Mg(II). Fosfomycin resistant proteins are evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK10291 glyoxalase I; Provisional

Probab=99.46  E-value=2e-12  Score=84.89  Aligned_cols=93  Identities=17%  Similarity=0.238  Sum_probs=63.4

Q ss_pred             EEecCCCHHHHHHHHHhhhCeEEEE----cC--eEEEEecCCC------------CCccccCCCcc-eEEEEEeCCHHHH
Q 044588           17 LLVEESKATNVVQFYKTTSGAQLEI----AG--STFLVSNFSN------------DSAAAKNMGIG-CVLCLEIDDVEAA   77 (117)
Q Consensus        17 L~v~~~D~~~a~~FY~~~fG~~l~~----~~--~~l~~~~~~~------------~g~~~~~~~~~-~~l~l~v~dvd~~   77 (117)
                      |.|.  |+++|++||+++||.++..    .+  ..+.+....+            .+......+.+ .+++|.|+|++++
T Consensus         2 l~V~--Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~hlaf~V~d~~~~   79 (129)
T PRK10291          2 LRVG--DLQRSIDFYTNVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEA   79 (129)
T ss_pred             EEec--CHHHHHHHHHhccCCEEEEeecCCCCcEEEEEEccCCCCCcceEEeeecCCCCCCcCCCCeeEEEEEeCCHHHH
Confidence            6677  9999999999999965532    11  1222211100            00001111233 4899999999999


Q ss_pred             HHHHHhCCCee---------ec-eEEEEECCCCCeEEEecccCC
Q 044588           78 LAKAMSGGVWA---------TG-RVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        78 ~~~~~~~G~~v---------g~-r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      ++++.++|+++         |. +.++++||+||.|+|.+..+.
T Consensus        80 ~~~l~~~G~~~~~~~~~~~~~~~~~~~i~DPdG~~iel~~~~~~  123 (129)
T PRK10291         80 CEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDA  123 (129)
T ss_pred             HHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEEcccc
Confidence            99999999876         22 457889999999999997753

>cd08351 ChaP_like ChaP, an enzyme involved in the biosynthesis of the antitumor agent chartreusin (cha); and similar proteins

Probab=99.46  E-value=1.6e-12  Score=84.73  Aligned_cols=98  Identities=13%  Similarity=0.062  Sum_probs=63.4

Q ss_pred             CCcceeEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEE-ecCCC-CCc-cccCCCcceEEEEEeC--CHHHHHHHHH
Q 044588            9 NFMGMKPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLV-SNFSN-DSA-AAKNMGIGCVLCLEID--DVEAALAKAM   82 (117)
Q Consensus         9 ~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~-~~~~~-~g~-~~~~~~~~~~l~l~v~--dvd~~~~~~~   82 (117)
                      ++.-....|.|+  |+++|++||+++||.+.... +....+ ..... ... .........++.|.++  |+++.++++.
T Consensus         2 ~~~~~hv~l~v~--Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~h~a~~v~~~dl~~~~~~l~   79 (123)
T cd08351           2 TVTLNHTIVPAR--DREASAEFYAEILGLPWAKPFGPFAVVKLDNGVSLDFAQPDGEIPPQHYAFLVSEEEFDRIFARIR   79 (123)
T ss_pred             cceEeEEEEEcC--CHHHHHHHHHHhcCCEeeeccCCEEEEEcCCCcEEEEecCCCCCCcceEEEEeCHHHHHHHHHHHH
Confidence            334445677777  99999999999999655432 211111 11100 000 0000112345555554  7999999999


Q ss_pred             hCCCee----------------eceEEEEECCCCCeEEEecc
Q 044588           83 SGGVWA----------------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        83 ~~G~~v----------------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++|+++                |.|.++++||+||.|+|++.
T Consensus        80 ~~G~~~~~~~~~~~~~~~~~~~g~~~~~f~DPdG~~iEl~~~  121 (123)
T cd08351          80 ERGIDYWADPQRTEPGQINTNDGGRGVYFLDPDGHLLEIITR  121 (123)
T ss_pred             HcCCceecCCcccccccccCCCCeeEEEEECCCCCEEEEEec
Confidence            999874                45889999999999999976

ChaP is an enzyme involved in the biosynthesis of the potent antitumor agent chartreusin (cha). Cha is an aromatic polyketide glycoside produced by Streptomyces chartreusis. ChaP may play a role as a meta-cleavage dioxygenase in the oxidative rearrangement of the anthracyclic polyketide. ChaP belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=4.1e-12  Score=81.61  Aligned_cols=90  Identities=20%  Similarity=0.232  Sum_probs=61.0

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc----C--eE-EEEec-C---------CCCC-ccccCCCcc-eEEEEEeCCHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA----G--ST-FLVSN-F---------SNDS-AAAKNMGIG-CVLCLEIDDVEA   76 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~----~--~~-l~~~~-~---------~~~g-~~~~~~~~~-~~l~l~v~dvd~   76 (117)
                      .|.|.  |.++|++||+++||.++...    +  .. +.+.. .         .... .+....+.+ .++++.|+|+++
T Consensus         8 ~l~v~--d~~~a~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~h~~~~v~d~~~   85 (125)
T cd08352           8 AIICS--DYEKSKEFYVEILGFKVIREVYRPERGSYKLDLLLNGGYQLELFSFPNPPERPSYPEACGLRHLAFSVEDIEA   85 (125)
T ss_pred             EEEcC--CHHHHHHHHHHhcCCEEeeeeecCCCCcEEEEEecCCCcEEEEEEcCCCCCCCCCCcCCCceEEEEEeCCHHH
Confidence            45666  99999999999999554321    1  11 11111 0         0000 000111133 479999999999


Q ss_pred             HHHHHHhCCCee---------eceEEEEECCCCCeEEEec
Q 044588           77 ALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        77 ~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      +++++.++|+++         |.++++++||+|+.|+|.+
T Consensus        86 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DP~G~~iEl~~  125 (125)
T cd08352          86 AVKHLKAKGVEVEPIRVDEFTGKRFTFFYDPDGLPLELYE  125 (125)
T ss_pred             HHHHHHHcCCccccccccCCCceEEEEEECCCCCEEEecC
Confidence            999999999887         4568899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.45  E-value=2.8e-12  Score=82.53  Aligned_cols=94  Identities=21%  Similarity=0.295  Sum_probs=62.1

Q ss_pred             eeEEEEecCCCHHHHHHHHHhhhCeEEEE-c-Ce----------EEEEecCCCCC---c-cccCCCcc-eEEEEEe--CC
Q 044588           13 MKPQLLVEESKATNVVQFYKTTSGAQLEI-A-GS----------TFLVSNFSNDS---A-AAKNMGIG-CVLCLEI--DD   73 (117)
Q Consensus        13 ~~p~L~v~~~D~~~a~~FY~~~fG~~l~~-~-~~----------~l~~~~~~~~g---~-~~~~~~~~-~~l~l~v--~d   73 (117)
                      +...|.+.  |.+++++||+++||.++.. . +.          .+.+.......   . .......+ .+++|.+  +|
T Consensus         2 ~~~~l~v~--d~~~s~~Fy~~~lG~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d   79 (122)
T cd08354           2 LETALYVD--DLEAAEAFYEDVLGLELMLKEDRRLAFFWVGGRGMLLLFDPGATSTPGGEIPPHGGSGPGHFAFAIPAEE   79 (122)
T ss_pred             eEEEEEeC--CHHHHHHHHHhccCCEEeecCCCceEEEEcCCCcEEEEEecCCcccccCCCCCCCCCCccEEEEEcCHHH
Confidence            35678888  9999999999999955443 1 11          12222111000   0 00011112 3555555  68


Q ss_pred             HHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEecc
Q 044588           74 VEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        74 vd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++++++++.++|+++        +.+.++++||+||.|+|+++
T Consensus        80 l~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  122 (122)
T cd08354          80 LAEWEAHLEAKGVAIESEVQWPRGGRSLYFRDPDGNLLELATP  122 (122)
T ss_pred             HHHHHHHHHhcCCceeccccCCCCeeEEEEECCCCCEEEEecC
Confidence            999999999999977        46788999999999999864

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>PRK04101 fosfomycin resistance protein FosB; Provisional

Probab=99.45  E-value=4.7e-12  Score=84.48  Aligned_cols=91  Identities=14%  Similarity=0.187  Sum_probs=61.9

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE----------cCeEEEEecCCCCCccccCCCc-ceEEEEEeC--CHHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI----------AGSTFLVSNFSNDSAAAKNMGI-GCVLCLEID--DVEAALAKA   81 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~----------~~~~l~~~~~~~~g~~~~~~~~-~~~l~l~v~--dvd~~~~~~   81 (117)
                      ..|.++  |++++.+||+++||.++..          ++..+.+... + ..+....+. ..++.|.++  |++++++++
T Consensus         8 i~L~v~--Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~g~~l~l~~~-~-~~~~~~~~~~~~hiaf~v~~~dv~~~~~~l   83 (139)
T PRK04101          8 ICFSVS--NLEKSIEFYEKVLGAKLLVKGRKTAYFDLNGLWIALNEE-K-DIPRNEIHQSYTHIAFSIEEEDFDHWYQRL   83 (139)
T ss_pred             EEEEec--CHHHHHHHHHhccCCEEEeecCeeEEEecCCeEEEeecc-C-CCCCccCCCCeeEEEEEecHHHHHHHHHHH
Confidence            355666  9999999999999965432          2333333221 1 111111112 235566655  999999999


Q ss_pred             HhCCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           82 MSGGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        82 ~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .++|+++         +.+.++++||+||.|+|.+..
T Consensus        84 ~~~G~~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  120 (139)
T PRK04101         84 KENDVNILPGRERDERDKKSIYFTDPDGHKFEFHTGT  120 (139)
T ss_pred             HHCCceEcCCccccCCCceEEEEECCCCCEEEEEeCC
Confidence            9999987         457889999999999998754

>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.44  E-value=6.7e-12  Score=80.61  Aligned_cols=90  Identities=18%  Similarity=0.146  Sum_probs=60.2

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE------------cCeEEEEecCCC-CCccccCC-CcceEEEEEeCC-HHHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI------------AGSTFLVSNFSN-DSAAAKNM-GIGCVLCLEIDD-VEAALAK   80 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~------------~~~~l~~~~~~~-~g~~~~~~-~~~~~l~l~v~d-vd~~~~~   80 (117)
                      .|.++  |++++++||+++||..+..            ++..+.+..... ...+.... ....+++|.+++ +++++++
T Consensus         8 ~l~v~--d~~~s~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~hi~~~~~~~~~~~~~~   85 (125)
T cd07253           8 VLTVA--DIEATLDFYTRVLGMEVVRFGEEVGRKALRFGSQKINLHPVGGEFEPAAGSPGPGSDDLCLITEPPIDELVAH   85 (125)
T ss_pred             EEEec--CHHHHHHHHHHHhCceeecccccCCceEEEeCCEEEEEecCCCccCcCccCCCCCCceEEEEecccHHHHHHH
Confidence            55666  9999999999999944432            222233322111 00011111 133578888864 9999999


Q ss_pred             HHhCCCee--------e----ceEEEEECCCCCeEEEec
Q 044588           81 AMSGGVWA--------T----GRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        81 ~~~~G~~v--------g----~r~~~v~DP~G~~w~l~~  107 (117)
                      +.++|+++        +    .+.++++||+||.|++.+
T Consensus        86 l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~  124 (125)
T cd07253          86 LEAHGVPIEEGPVPRTGARGPITSVYFRDPDGNLIELSN  124 (125)
T ss_pred             HHHCCceeecCcccccCCCCCccEEEEECCCCCEEEeee
Confidence            99999976        1    357899999999999976

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03645 glyox_marine lactoylglutathione lyase family protein

Probab=99.44  E-value=3.6e-12  Score=87.52  Aligned_cols=48  Identities=25%  Similarity=0.279  Sum_probs=41.3

Q ss_pred             ceEEEEEeCCHHHHHHHHHhCCCee----------e---ceEEEEECCCCCeEEEecccCC
Q 044588           64 GCVLCLEIDDVEAALAKAMSGGVWA----------T---GRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        64 ~~~l~l~v~dvd~~~~~~~~~G~~v----------g---~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      ..+|+|.|+|++++++++.++|+++          |   .+.++++||+||.|+|+++.+.
T Consensus        94 ~~Hla~~v~dida~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~~~  154 (162)
T TIGR03645        94 VFHFCVQDPDVEGLAERIVAAGGKKRMPVPRYYYPGEKPYRMIYMEDPFGNILEIYSHSYE  154 (162)
T ss_pred             ceEEEEEcCCHHHHHHHHHHcCCcccCCCccccCCCCCceEEEEEECCCCCEEEEEEcChh
Confidence            3589999999999999999999864          1   2688999999999999988754

Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.

>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.43  E-value=5.2e-12  Score=83.92  Aligned_cols=44  Identities=18%  Similarity=0.270  Sum_probs=40.4

Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           65 CVLCLEIDDVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        65 ~~l~l~v~dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      .+|+|.|+|++++++++.++|+++         |.|.++++||+|+.|+|.+.
T Consensus        89 ~hia~~v~d~d~~~~~l~~~G~~~~~~~~~~~~~~r~~~~~DPdG~~iEl~e~  141 (142)
T cd08353          89 RRVMFAVDDIDARVARLRKHGAELVGEVVQYENSYRLCYIRGPEGILIELAEQ  141 (142)
T ss_pred             eEEEEEeCCHHHHHHHHHHCCCceeCCceecCCCeEEEEEECCCCCEEEeeec
Confidence            489999999999999999999887         46789999999999999975

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.

>cd07251 Glo_EDI_BRP_like_10 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.42  E-value=6.4e-12  Score=80.65  Aligned_cols=90  Identities=22%  Similarity=0.309  Sum_probs=61.2

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE-----------EcCeEEEEecCCC----CCccc-cCCCcceEEEEEe---CCHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE-----------IAGSTFLVSNFSN----DSAAA-KNMGIGCVLCLEI---DDVEA   76 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~-----------~~~~~l~~~~~~~----~g~~~-~~~~~~~~l~l~v---~dvd~   76 (117)
                      .|.++  |++++.+||+++||.++.           .++..+.+.....    .+.+. .....+.++.+.+   +|+++
T Consensus         3 ~l~v~--d~~~a~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~   80 (121)
T cd07251           3 TLGVA--DLARSRAFYEALLGWKPSADSNDGVAFFQLGGLVLALFPREELAKDAGVPVPPPGFSGITLAHNVRSEEEVDA   80 (121)
T ss_pred             eEeeC--CHHHHHHHHHHhcCceecccCCCceEEEEcCCeEEEEecchhhhhhcCCCCCCCCccceEEEEEcCCHHHHHH
Confidence            46677  999999999999995543           2233333332110    01111 1112455666654   58999


Q ss_pred             HHHHHHhCCCee---------eceEEEEECCCCCeEEEec
Q 044588           77 ALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        77 ~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      +++++++.|+++         |.+.++++||+||+|+|..
T Consensus        81 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~Gn~iei~~  120 (121)
T cd07251          81 VLARAAAAGATIVKPPQDVFWGGYSGYFADPDGHLWEVAH  120 (121)
T ss_pred             HHHHHHhCCCEEecCCccCCCCceEEEEECCCCCEEEEee
Confidence            999999999987         4678899999999999974

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.40  E-value=2e-11  Score=78.85  Aligned_cols=96  Identities=19%  Similarity=0.202  Sum_probs=63.5

Q ss_pred             ceeEEEEecCCCHHHHHHHHHhhhCeEEEEc--CeEEEEecCCCC-----CccccCCCcceEEEEEeCC---HHHHHHHH
Q 044588           12 GMKPQLLVEESKATNVVQFYKTTSGAQLEIA--GSTFLVSNFSND-----SAAAKNMGIGCVLCLEIDD---VEAALAKA   81 (117)
Q Consensus        12 ~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~--~~~l~~~~~~~~-----g~~~~~~~~~~~l~l~v~d---vd~~~~~~   81 (117)
                      ++.+.|.++  |++++.+||+++||.+....  +...+.......     ..+....+...+++|.+++   +++.++++
T Consensus         2 ~~hv~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~f~v~~~~dl~~~~~~l   79 (120)
T cd07254           2 RFHVALNVD--DLEASIAFYSKLFGVEPTKVRDDYAKFLLEDPRLNFVLNERPGAPGGGLNHLGVQVDSAEEVAEAKARA   79 (120)
T ss_pred             cEEEEEEeC--CHHHHHHHHHHHhCCeEecccCCeeEEEecCCceEEEEecCCCCCCCCeeEEEEEeCCHHHHHHHHHHH
Confidence            467788888  99999999999999544211  111111111000     0000111133478888876   78899999


Q ss_pred             HhCCCee---e--------ceEEEEECCCCCeEEEeccc
Q 044588           82 MSGGVWA---T--------GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        82 ~~~G~~v---g--------~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .++|.++   +        .+..+++||+||.|+|.+..
T Consensus        80 ~~~G~~~~~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~  118 (120)
T cd07254          80 EAAGLPTFKEEDTTCCYAVQDKVWVTDPDGNAWEVFVTL  118 (120)
T ss_pred             HHcCCeEEccCCcccccCCcceEEEECCCCCEEEEEEee
Confidence            9999987   1        35689999999999998753

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>TIGR03081 metmalonyl_epim methylmalonyl-CoA epimerase

Probab=99.40  E-value=1.1e-11  Score=80.41  Aligned_cols=91  Identities=23%  Similarity=0.297  Sum_probs=60.1

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEE----------------EcCeEEEEecCCC-CCc-cc--cCCCcce-EEEEEeCC
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLE----------------IAGSTFLVSNFSN-DSA-AA--KNMGIGC-VLCLEIDD   73 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~----------------~~~~~l~~~~~~~-~g~-~~--~~~~~~~-~l~l~v~d   73 (117)
                      ..|.|+  |++++++||+++||.++.                .++..+.+..... ... ..  ...+.++ +++|.|+|
T Consensus         5 v~l~v~--D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~g~~~i~~~v~d   82 (128)
T TIGR03081         5 VGIAVP--DLEEAAKLYEDVLGAHVSHIEEVPEQGVKVVFIALGNTKVELLEPLGEDSPIAKFLEKNGGGIHHIAIEVDD   82 (128)
T ss_pred             EEEEeC--CHHHHHHHHHHHhCCCCccceeCCCCCcEEEEEecCCEEEEEEecCCCCChHHHHHhcCCCceEEEEEEcCC
Confidence            346677  999999999999994432                1222333332111 100 00  0112343 89999999


Q ss_pred             HHHHHHHHHhCCCee----------eceEEEE--ECCCCCeEEEec
Q 044588           74 VEAALAKAMSGGVWA----------TGRVGKV--KDPCGFTWLIYS  107 (117)
Q Consensus        74 vd~~~~~~~~~G~~v----------g~r~~~v--~DP~G~~w~l~~  107 (117)
                      ++++++++.++|+++          |.+..++  +||+|+.|+|.+
T Consensus        83 i~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~dp~G~~~E~~~  128 (128)
T TIGR03081        83 IEAALETLKEKGVRLIDEEPRIGAGGKPVAFLHPKSTGGVLIELEE  128 (128)
T ss_pred             HHHHHHHHHHCCCcccCCCCccCCCCCEEEEecccccCcEEEEecC
Confidence            999999999999977          2344566  799999999864

Members of this protein family are the enzyme methylmalonyl-CoA epimerase (EC 5.1.99.1), also called methylmalonyl-CoA racemase. This enzyme converts (2R)-methylmalonyl-CoA to (2S)-methylmalonyl-CoA, which is then a substrate for methylmalonyl-CoA mutase (TIGR00642). It is known in bacteria, archaea, and as a mitochondrial protein in animals. It is closely related to lactoylglutathione lyase (TIGR00068), which is also called glyoxylase I, and is also a homodimer.

>cd07244 FosA FosA, a Fosfomycin resistance protein, catalyzes the addition of glutathione to the antibiotic fosfomycin, making it inactive

Probab=99.39  E-value=1.2e-11  Score=80.43  Aligned_cols=89  Identities=18%  Similarity=0.112  Sum_probs=60.6

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc----------CeEEEEecCCCCCccccCCCcceEEEEEe--CCHHHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA----------GSTFLVSNFSNDSAAAKNMGIGCVLCLEI--DDVEAALAKAM   82 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~----------~~~l~~~~~~~~g~~~~~~~~~~~l~l~v--~dvd~~~~~~~   82 (117)
                      ..|.++  |++++.+||+++||.++...          +..+.+... +  . ....+...+++|.+  +|++++++++.
T Consensus         5 v~l~v~--d~~~~~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~l~~~-~--~-~~~~~~~~hi~f~v~~~dl~~~~~~l~   78 (121)
T cd07244           5 ITLAVS--DLERSVAFYVDLLGFKLHVRWDKGAYLEAGDLWLCLSVD-A--N-VGPAKDYTHYAFSVSEEDFASLKEKLR   78 (121)
T ss_pred             EEEEEC--CHHHHHHHHHHhcCCEEEEecCCceEEecCCEEEEEecC-C--C-CCCCCCeeeEEEEeCHHHHHHHHHHHH
Confidence            345666  99999999999999655321          112222110 0  0 01111334666666  68999999999


Q ss_pred             hCCCee------eceEEEEECCCCCeEEEeccc
Q 044588           83 SGGVWA------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        83 ~~G~~v------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++|+++      ..+..+++||+||.|+|++..
T Consensus        79 ~~G~~~~~~~~~~~~~~~f~DPdG~~ie~~~~~  111 (121)
T cd07244          79 QAGVKEWKENTSEGDSFYFLDPDGHKLELHVGS  111 (121)
T ss_pred             HcCCcccCCCCCCccEEEEECCCCCEEEEEeCC
Confidence            999987      346789999999999998753

This subfamily family contains FosA, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-N-acetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosA, catalyzes the addition of glutathione to the antibiotic fosfomycin, (1R,2S)-epoxypropylphosphonic acid, making it inactive. FosA is a Mn(II) dependent enzyme. It is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>PRK06724 hypothetical protein; Provisional

Probab=99.39  E-value=1.3e-11  Score=82.01  Aligned_cols=89  Identities=13%  Similarity=0.128  Sum_probs=59.4

Q ss_pred             EEEEecCCCHHHHHHHHHhhhC---eEEE----E-cC-eEEEEecCCCCCccccCCCcceEEEEEe---CCHHHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSG---AQLE----I-AG-STFLVSNFSNDSAAAKNMGIGCVLCLEI---DDVEAALAKAM   82 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG---~~l~----~-~~-~~l~~~~~~~~g~~~~~~~~~~~l~l~v---~dvd~~~~~~~   82 (117)
                      .-|.|+  |+++|++||+++||   .+..    . ++ ..+.+..... ... ... ...++++.|   +|+|+.++++.
T Consensus        11 v~l~V~--Dle~s~~FY~~vlg~lg~~~~~~~~~~~g~~~l~l~~~~~-~~~-~~~-g~~h~af~v~~~~dvd~~~~~l~   85 (128)
T PRK06724         11 IEFWVA--NLEESISFYDMLFSIIGWRKLNEVAYSTGESEIYFKEVDE-EIV-RTL-GPRHICYQAINRKVVDEVAEFLS   85 (128)
T ss_pred             EEEEeC--CHHHHHHHHHHHHhhCCcEEeeeEeeeCCCeeEEEecCCc-ccc-CCC-CceeEEEecCChHHHHHHHHHHH
Confidence            345666  99999999999885   2221    2 22 2343332111 111 111 345788876   79999999999


Q ss_pred             hCCCee------------eceEEEEECCCCCeEEEecc
Q 044588           83 SGGVWA------------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        83 ~~G~~v------------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++|+++            |.+..+|+||+||.|+|...
T Consensus        86 ~~G~~~~~~p~~~~~~~~g~~~~~f~DPdG~~iEl~~~  123 (128)
T PRK06724         86 STKIKIIRGPMEMNHYSEGYYTIDFYDPNGFIIEVAYT  123 (128)
T ss_pred             HCCCEEecCCcccCCCCCCEEEEEEECCCCCEEEEEeC
Confidence            999986            12556899999999999866

>cd08363 FosB FosB, a fosfomycin resistance protein, catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin

Probab=99.38  E-value=1.1e-11  Score=82.04  Aligned_cols=91  Identities=16%  Similarity=0.187  Sum_probs=62.2

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE----------EcCeEEEEecCCCCCccccCCCcceEEEEEeC--CHHHHHHHHHh
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE----------IAGSTFLVSNFSNDSAAAKNMGIGCVLCLEID--DVEAALAKAMS   83 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~----------~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~--dvd~~~~~~~~   83 (117)
                      .|.|+  |++++.+||+++||.++.          .++..+.+... +........+...+++|.++  |++++++++.+
T Consensus         5 ~l~V~--Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~l~~~-~~~~~~~~~~~~~hiaf~v~~~dld~~~~~l~~   81 (131)
T cd08363           5 TFSVS--NLDKSISFYKHVFMEKLLVLGEKTAYFTIGGTWLALNEE-PDIPRNEIRQSYTHIAFTIEDSEFDAFYTRLKE   81 (131)
T ss_pred             EEEEC--CHHHHHHHHHHhhCCEEeccCCccceEeeCceEEEEEcc-CCCCcCCcCccceEEEEEecHHHHHHHHHHHHH
Confidence            46677  999999999999995443          23333333221 10000011112346777766  59999999999


Q ss_pred             CCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           84 GGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        84 ~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +|+++         +.+..+++||+||.|+|.+..
T Consensus        82 ~G~~~~~~~~~~~~~~~~~~f~DPdG~~iEl~~~~  116 (131)
T cd08363          82 AGVNILPGRKRDVRDRKSIYFTDPDGHKLEVHTGT  116 (131)
T ss_pred             cCCcccCCCccccCcceEEEEECCCCCEEEEecCc
Confidence            99876         356789999999999999865

This subfamily family contains FosB, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosB catalyzes the Mg(II) dependent addition of L-cysteine to the epoxide ring of fosfomycin, (1R,2S)-epoxypropylphosphonic acid, rendering it inactive. FosB is evolutionarily related to glyoxalase I and type I extradiol dioxygenases

>TIGR00068 glyox_I lactoylglutathione lyase

Probab=99.38  E-value=2.2e-11  Score=82.22  Aligned_cols=95  Identities=16%  Similarity=0.114  Sum_probs=64.3

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE--c--Ce--EEEEec--CCC-C----------CccccCCCcceEEEEEeCCH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI--A--GS--TFLVSN--FSN-D----------SAAAKNMGIGCVLCLEIDDV   74 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~--~--~~--~l~~~~--~~~-~----------g~~~~~~~~~~~l~l~v~dv   74 (117)
                      ...|.+.  |+++|.+||+++||.++..  .  +.  .+.+..  ... .          +.+........+++|.|+|+
T Consensus        20 hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~hi~f~v~dl   97 (150)
T TIGR00068        20 HTMLRVG--DLDKSLDFYTEVLGMKLLRKRDFPEMKFSLAFLGYGDETSAAVIELTHNWGTEKYDLGNGFGHIAIGVDDV   97 (150)
T ss_pred             EEEEEec--CHHHHHHHHHHhcCCEEEEEeccCCCceEEEEecCCCCCCccEEEEeecCCCCcccCCCceeEEEEecCCH
Confidence            5566677  9999999999999966532  1  11  121111  000 0          00001111235799999999


Q ss_pred             HHHHHHHHhCCCee---------e-ceEEEEECCCCCeEEEecccC
Q 044588           75 EAALAKAMSGGVWA---------T-GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        75 d~~~~~~~~~G~~v---------g-~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +++++++.++|+++         + .+.++|+||+|+.|+|.++..
T Consensus        98 d~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  143 (150)
T TIGR00068        98 YKACERVRALGGNVVREPGPVKGGTTVIAFVEDPDGYKIELIQRKS  143 (150)
T ss_pred             HHHHHHHHHcCCccccCCcccCCCceEEEEEECCCCCEEEEEECCc
Confidence            99999999999876         1 356789999999999998764

Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.

>PLN02367 lactoylglutathione lyase

Probab=99.38  E-value=3.7e-11  Score=87.16  Aligned_cols=46  Identities=24%  Similarity=0.242  Sum_probs=41.0

Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEecccC
Q 044588           65 CVLCLEIDDVEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        65 ~~l~l~v~dvd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      .+|+|.|+|++++++++.++|+++        +.+.++++||+||.|+|++...
T Consensus       171 ~HIaf~VdDVdaa~erL~a~Gv~~v~~P~~g~~~riaFIkDPDGn~IEL~e~~~  224 (233)
T PLN02367        171 GHIGITVDDVYKACERFEELGVEFVKKPNDGKMKGIAFIKDPDGYWIEIFDLKT  224 (233)
T ss_pred             eEEEEEcCCHHHHHHHHHHCCCEEEeCCccCCceEEEEEECCCCCEEEEEeccc
Confidence            489999999999999999999987        2468899999999999998653

>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.37  E-value=1.8e-11  Score=78.82  Aligned_cols=89  Identities=15%  Similarity=0.122  Sum_probs=57.8

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEE--E--------------c-CeEEEEecCCCCCcc--ccCCCcceEEEEEeC---
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLE--I--------------A-GSTFLVSNFSNDSAA--AKNMGIGCVLCLEID---   72 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~--~--------------~-~~~l~~~~~~~~g~~--~~~~~~~~~l~l~v~---   72 (117)
                      ..|.|+  |++++++||+++||.+..  .              + +..+.+.........  ........+++|.|+   
T Consensus         5 i~l~v~--dl~~s~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~hi~f~v~~~~   82 (125)
T cd07241           5 VAIWTK--DLERMKAFYVTYFGATSNEKYHNPRKGFESYFLSFDDGARLELMTRPDIAPSPNEGERTGWAHLAFSVGSKE   82 (125)
T ss_pred             EEEEec--CHHHHHHHHHHHhCCEeeceEeCCCCCceEEEEecCCCcEEEEEcCcccCCCcccCCCCceEEEEEECCCHH
Confidence            456777  999999999999995431  1              1 111222211000000  011112357999995   


Q ss_pred             CHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEE
Q 044588           73 DVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLI  105 (117)
Q Consensus        73 dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l  105 (117)
                      |+++.++++.++|+++         |.+.++++||+||.|+|
T Consensus        83 ~v~~~~~~l~~~g~~~~~~~~~~~~g~~~~~~~DPdG~~iE~  124 (125)
T cd07241          83 AVDELTERLRADGYLIIGEPRTTGDGYYESVILDPEGNRIEI  124 (125)
T ss_pred             HHHHHHHHHHHCCCEEEeCceecCCCeEEEEEECCCCCEEEe
Confidence            5899999999999987         23446799999999987

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.35  E-value=7.4e-11  Score=76.36  Aligned_cols=94  Identities=19%  Similarity=0.204  Sum_probs=62.4

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEcC-eE-----------EEEecCCCCCcc-ccCCCcceEEEEEeC---CHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIAG-ST-----------FLVSNFSNDSAA-AKNMGIGCVLCLEID---DVEAAL   78 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~~-~~-----------l~~~~~~~~g~~-~~~~~~~~~l~l~v~---dvd~~~   78 (117)
                      ..|.++  |++++.+||+++||.++...+ ..           |.+... +.... ........++.|.|+   ++++.+
T Consensus         6 i~l~v~--d~~~~~~Fy~~~lG~~~~~~~~~~~~l~~~~~~~~l~l~~~-~~~~~~~~~~~~~~hi~f~v~~~~~v~~~~   82 (125)
T cd07255           6 VTLRVA--DLERSLAFYQDVLGLEVLERTDSTAVLGTGGKRPLLVLEED-PDAPPAPPGATGLYHFAILLPSRADLAAAL   82 (125)
T ss_pred             EEEEEC--CHHHHHHHHHhccCcEEEEcCCCEEEEecCCCeEEEEEEeC-CCCCcccCCCCcEEEEEEECCCHHHHHHHH
Confidence            356666  999999999999995554321 11           222111 11100 111113357888886   589999


Q ss_pred             HHHHhCCCee-------eceEEEEECCCCCeEEEecccCC
Q 044588           79 AKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        79 ~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      +++.++|+++       ..+.++++||+||.|+|.+..+.
T Consensus        83 ~~l~~~g~~~~~~~~~~~~~~~~~~DPdG~~iEi~~~~~~  122 (125)
T cd07255          83 RRLIELGIPLVGASDHLVSEALYLSDPEGNGIEIYADRPR  122 (125)
T ss_pred             HHHHHcCCceeccccccceeEEEEECCCCCEEEEEEecCc
Confidence            9999999877       12567899999999999876543

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.33  E-value=5.3e-11  Score=77.93  Aligned_cols=94  Identities=13%  Similarity=0.072  Sum_probs=61.6

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecC-CCCCcc-ccCCCcceEEEEEeCC---HHHHHHHHHhCCCee
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNF-SNDSAA-AKNMGIGCVLCLEIDD---VEAALAKAMSGGVWA   88 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~-~~~g~~-~~~~~~~~~l~l~v~d---vd~~~~~~~~~G~~v   88 (117)
                      ..|.|+  |++++.+||+++||.+.... +....+... ...... ........+++|.|+|   ++++++++.++|.++
T Consensus        10 v~l~v~--d~~~s~~FY~~vLG~~~~~~~~~~~~l~~~~~~~~i~l~~~~~~~~~iaf~v~~~~dv~~~~~~l~~~G~~~   87 (124)
T cd08361          10 VRLGTR--DLAGATRFATDILGLQVAERTAKATYFRSDARDHTLVYIEGDPAEQASGFELRDDDALESAATELEQYGHEV   87 (124)
T ss_pred             EEEeeC--CHHHHHHHHHhccCceeccCCCCeEEEEcCCccEEEEEEeCCCceEEEEEEECCHHHHHHHHHHHHHcCCce
Confidence            445555  99999999999999655332 222222211 110000 0001134578888874   999999999999876


Q ss_pred             ------------eceEEEEECCCCCeEEEecccC
Q 044588           89 ------------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        89 ------------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                                  +.++.+++||+||.|++.....
T Consensus        88 ~~~~~~~~~~~~~~~~~~f~DPdG~~iE~~~~~~  121 (124)
T cd08361          88 RRGTAEECELRKVKAFIAFRDPSGNSIELVVRPS  121 (124)
T ss_pred             EEcCHHHhhcCCcceEEEEECcCCCEEEEEEeee
Confidence                        1346799999999999986543

This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins

Probab=99.33  E-value=3.2e-11  Score=77.35  Aligned_cols=91  Identities=16%  Similarity=0.098  Sum_probs=60.0

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEcCeEEEEec-CCCC--C---ccccCCCcceEEEEEeCCHHHHHHHHHhCCCee-
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSN-FSND--S---AAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWA-   88 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~~~~l~~~~-~~~~--g---~~~~~~~~~~~l~l~v~dvd~~~~~~~~~G~~v-   88 (117)
                      .|.++  |++++.+||+ .||.+....+..+.+.. ....  .   ...........+.+.++|++++++++.++|+++ 
T Consensus         7 ~l~v~--d~~~s~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~Gi~~~   83 (112)
T cd08344           7 ALEVP--DLEVARRFYE-AFGLDVREEGDGLELRTAGNDHRWARLLEGARKRLAYLSFGIFEDDFAAFARHLEAAGVALA   83 (112)
T ss_pred             EEecC--CHHHHHHHHH-HhCCcEEeecCceEEEecCCCceEEEeecCCCCceeeEEEEeEhhhHHHHHHHHHHcCCcee
Confidence            34555  9999999997 69966543332222211 1010  0   000011123556667789999999999999987 


Q ss_pred             ------eceEEEEECCCCCeEEEeccc
Q 044588           89 ------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        89 ------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                            +.+.++++||+||.|+|....
T Consensus        84 ~~~~~~~~~~~~~~DP~Gn~iel~~~~  110 (112)
T cd08344          84 AAPPGADPDGVWFRDPDGNLLQVKVAE  110 (112)
T ss_pred             cCCCcCCCCEEEEECCCCCEEEEecCC
Confidence                  346789999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd08362 BphC5-RrK37_N_like N-terminal, non-catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Rhodococcus rhodochrous K37, and similar proteins

Probab=99.33  E-value=4.1e-11  Score=77.04  Aligned_cols=93  Identities=16%  Similarity=0.140  Sum_probs=62.8

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCCCCCc----cccCCCcceEEEEEe---CCHHHHHHHHHhCCCe
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFSNDSA----AAKNMGIGCVLCLEI---DDVEAALAKAMSGGVW   87 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~~~g~----~~~~~~~~~~l~l~v---~dvd~~~~~~~~~G~~   87 (117)
                      .|.++  |.+++++||+++||.+.... +....+........    .......-.++.+.+   +++++.++++.++|++
T Consensus         8 ~l~v~--d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~l~~~~~~l~~~G~~   85 (120)
T cd08362           8 GLGVP--DLAAAAAFYREVWGLSVVAEDDGIVYLRATGSEHHILRLRRSDRNRLDVVSFSVASRADVDALARQVAARGGT   85 (120)
T ss_pred             EEecC--CHHHHHHHHHhCcCcEEEEecCCEEEEECCCCccEEEEeccCCCCCCceEEEEeCCHHHHHHHHHHHHHcCCc
Confidence            55566  99999999999999765432 22333332111000    011111234788888   5789999999999997


Q ss_pred             e-----------eceEEEEECCCCCeEEEecccC
Q 044588           88 A-----------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        88 v-----------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +           +.+.++++||+||.++|++..+
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~DP~G~~iel~~~~~  119 (120)
T cd08362          86 VLSEPGATDDPGGGYGFRFFDPDGRLIEFSADVE  119 (120)
T ss_pred             eecCCcccCCCCCceEEEEECCCCCEEEEEeccc
Confidence            6           2467899999999999987653

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the N-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dioxyge

>PLN03042 Lactoylglutathione lyase; Provisional

Probab=99.33  E-value=1.2e-10  Score=81.97  Aligned_cols=45  Identities=24%  Similarity=0.236  Sum_probs=39.8

Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEeccc
Q 044588           65 CVLCLEIDDVEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        65 ~~l~l~v~dvd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .+|+|.|+|++++++++.+.|+++        +.++++++||+|+.|+|++..
T Consensus       123 ~Hlaf~V~Dvd~~~~~L~~~Gv~v~~~p~~~~~~~~~fi~DPdG~~IEl~e~~  175 (185)
T PLN03042        123 GHIGITVDDVYKACERFEKLGVEFVKKPDDGKMKGLAFIKDPDGYWIEIFDLK  175 (185)
T ss_pred             cEEEEEcCCHHHHHHHHHHCCCeEEeCCccCCceeEEEEECCCCCEEEEEECC
Confidence            479999999999999999999987        246789999999999999854

>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.33  E-value=7.5e-11  Score=80.74  Aligned_cols=91  Identities=14%  Similarity=0.085  Sum_probs=61.4

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc-C-------------eEEEEecCCCCCccccCCCcc-eEEEEEeCC---HHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA-G-------------STFLVSNFSNDSAAAKNMGIG-CVLCLEIDD---VEAA   77 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~-~-------------~~l~~~~~~~~g~~~~~~~~~-~~l~l~v~d---vd~~   77 (117)
                      .|.|+  |++++.+||+++||.+.... .             ..|.+..... .........+ .+|+|.|+|   ++++
T Consensus         6 ~i~V~--Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~-~~~~~~~~~~l~Hiaf~v~d~~dvd~~   82 (157)
T cd08347           6 TLTVR--DPEATAAFLTDVLGFREVGEEGDRVRLEEGGGGPGAVVDVLEEPD-QPRGRPGAGTVHHVAFRVPDDEELEAW   82 (157)
T ss_pred             EEEeC--CHHHHHHHHHHhcCCEEEeeeCCEEEEEecCCCCCCEEEEEeCCC-CCCCcccCCceEEEEEECCCHHHHHHH
Confidence            46667  99999999999999544321 1             1222221100 0000111123 489999987   8999


Q ss_pred             HHHHHhCCCee-------eceEEEEECCCCCeEEEeccc
Q 044588           78 LAKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        78 ~~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++++.++|.++       +.+..+++||+||.|+|.+..
T Consensus        83 ~~~L~~~Gv~~~~~~~~~~~~s~yf~DPdG~~iEl~~~~  121 (157)
T cd08347          83 KERLEALGLPVSGIVDRFYFKSLYFREPGGILFEIATDG  121 (157)
T ss_pred             HHHHHHCCCCcccccccccEEEEEEECCCCcEEEEEECC
Confidence            99999999877       235679999999999999864

The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>PLN02300 lactoylglutathione lyase

Probab=99.32  E-value=6.4e-11  Score=87.94  Aligned_cols=96  Identities=16%  Similarity=0.217  Sum_probs=64.3

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE----cC--e-EEEEecC--CC---------CCccccCCCcc-eEEEEEeCCH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI----AG--S-TFLVSNF--SN---------DSAAAKNMGIG-CVLCLEIDDV   74 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~----~~--~-~l~~~~~--~~---------~g~~~~~~~~~-~~l~l~v~dv   74 (117)
                      ...|.|+  |++++++||+++||.++..    .+  . ...+...  ..         .+......+.+ .+++|.|+|+
T Consensus        27 Hv~l~V~--Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~l~~g~~~~~~~lel~~~~~~~~~~~~~g~~hia~~v~dv  104 (286)
T PLN02300         27 HVVYRVG--DLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSNFVVELTYNYGVDKYDIGTGFGHFGIAVEDV  104 (286)
T ss_pred             EEEEEeC--CHHHHHHHHHHhcCCEEEEeeecCCCcEEEEEEccCCCCCceEEEEeccCCCCccccCCCccEEEEEeCCH
Confidence            4456677  9999999999999965521    11  1 1112110  00         01111111233 3899999999


Q ss_pred             HHHHHHHHhCCCee---------e-ceEEEEECCCCCeEEEecccCC
Q 044588           75 EAALAKAMSGGVWA---------T-GRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        75 d~~~~~~~~~G~~v---------g-~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      ++.++++.++|+++         | .++++++||+||.|+|.+....
T Consensus       105 d~~~~~l~~~G~~i~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  151 (286)
T PLN02300        105 AKTVELVKAKGGKVTREPGPVKGGKSVIAFVKDPDGYKFELIQRGPT  151 (286)
T ss_pred             HHHHHHHHHCCCeeecCCcccCCCceEEEEEECCCCCEEEEEeCCCC
Confidence            99999999999877         2 3567999999999999987543

>cd08348 BphC2-C3-RGP6_C_like The single-domain 2,3-dihydroxybiphenyl 1,2-dioxygenases (BphC, EC 1

Probab=99.32  E-value=1.6e-10  Score=75.97  Aligned_cols=95  Identities=17%  Similarity=0.224  Sum_probs=62.7

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc-C--eEEEEecC--CC--------CCccccCCCcc-eEEEEEeCCHH---HHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA-G--STFLVSNF--SN--------DSAAAKNMGIG-CVLCLEIDDVE---AAL   78 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~-~--~~l~~~~~--~~--------~g~~~~~~~~~-~~l~l~v~dvd---~~~   78 (117)
                      .|.++  |++++++||+++||.++... +  ....+...  ..        ..........+ .+++|.|+|++   +.+
T Consensus         6 ~l~v~--D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f~v~~~~~v~~~~   83 (134)
T cd08348           6 VLYVR--DLEAMVRFYRDVLGFTVTDRGPLGGLVFLSRDPDEHHQIALITGRPAAPPPGPAGLNHIAFEVDSLDDLRDLY   83 (134)
T ss_pred             EEEec--CHHHHHHHHHHhcCCEEEeeccCCcEEEEEecCCCceEEEEEecCCCCCCCCCCCceEEEEEeCCHHHHHHHH
Confidence            45666  99999999999999654322 1  22222211  00        00000011123 46889988655   688


Q ss_pred             HHHHhCCCee-------eceEEEEECCCCCeEEEecccCCC
Q 044588           79 AKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSPVKKC  112 (117)
Q Consensus        79 ~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~~~~  112 (117)
                      +++.++|+++       +.+.++++||+||.|+|.+..++.
T Consensus        84 ~~l~~~G~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~~~~~  124 (134)
T cd08348          84 ERLRAAGITPVWPVDHGNAWSIYFRDPDGNRLELFVDTPWY  124 (134)
T ss_pred             HHHHHCCCCccccCCCCceeEEEEECCCCCEEEEEEcCCCC
Confidence            9999999877       357789999999999999877653

13.11.39) from Rhodococcus globerulus P6, BphC2-RGP6 and BphC3-RGP6, and similar proteins. This subfamily contains Rhodococcus globerulus P6 BphC2-RGP6 and BphC3-RGP6, and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, yielding 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid. This is the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Most type I extradiol dioxygenases are activated by Fe(II). Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC2-RGP6 and BphC3-RGP6 are

>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.31  E-value=1.2e-10  Score=75.59  Aligned_cols=93  Identities=12%  Similarity=0.022  Sum_probs=61.5

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc--CeEEEEecC-CCCC--ccccCCCcceEEEEEeC---CHHHHHHHHHhCCC
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA--GSTFLVSNF-SNDS--AAAKNMGIGCVLCLEID---DVEAALAKAMSGGV   86 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~--~~~l~~~~~-~~~g--~~~~~~~~~~~l~l~v~---dvd~~~~~~~~~G~   86 (117)
                      ..|.|+  |+++|.+||+++||.+....  +....+... ....  ..........++.+.++   |+++.++++.++|+
T Consensus         6 v~l~v~--Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~f~v~~~~dl~~~~~~l~~~Gv   83 (120)
T cd07252           6 LGVESS--DLDAWRRFATDVLGLQVGDRPEDGALYLRMDDRAWRIAVHPGEADDLAYAGWEVADEAALDALAARLRAAGV   83 (120)
T ss_pred             EEEEeC--CHHHHHHHHHhccCceeccCCCCCeEEEEccCCceEEEEEeCCCCceeEEEEEECCHHHHHHHHHHHHHcCC
Confidence            456677  99999999999999655322  222222211 1100  00011112346778876   58999999999999


Q ss_pred             ee------------eceEEEEECCCCCeEEEeccc
Q 044588           87 WA------------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        87 ~v------------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++            +.+..+++||+||.|++....
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  118 (120)
T cd07252          84 AVEEGSAELAAERGVEGLIRFADPDGNRHELFWGP  118 (120)
T ss_pred             eEEEcCHHHHhhCCCcEEEEEECCCCCEEEEEecc
Confidence            87            126789999999999998654

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-

>cd08343 ED_TypeI_classII_C C-terminal domain of type I, class II extradiol dioxygenases; catalytic domain

Probab=99.31  E-value=8.9e-11  Score=77.31  Aligned_cols=94  Identities=12%  Similarity=0.132  Sum_probs=63.1

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc-C-----eEEEEecCCC-C--CccccC-CCcceEEEEEeCCHH---HHHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA-G-----STFLVSNFSN-D--SAAAKN-MGIGCVLCLEIDDVE---AALAKAM   82 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~-~-----~~l~~~~~~~-~--g~~~~~-~~~~~~l~l~v~dvd---~~~~~~~   82 (117)
                      .|.|+  |+++|++||+++||.++... +     ....+..... .  ...... .....+++|.|+|++   +.++++.
T Consensus         4 ~l~V~--dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~hl~~~v~d~~~~~~~~~~l~   81 (131)
T cd08343           4 VLRTP--DVAATAAFYTEVLGFRVSDRVGDPGVDAAAFLRCDEDHHDLALFPGPERPGLHHVAFEVESLDDILRAADRLA   81 (131)
T ss_pred             EEEcC--CHHHHHHHHHhcCCCEEEEEEccCCceeEEEEEcCCCcceEEEEcCCCCCCeeEEEEEcCCHHHHHHHHHHHH
Confidence            45666  99999999999999665322 1     1222222111 0  000111 223457899998774   7899999


Q ss_pred             hCCCee----------eceEEEEECCCCCeEEEecccCC
Q 044588           83 SGGVWA----------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        83 ~~G~~v----------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      ++|+++          +.++++++||+|+.|+|.+..+.
T Consensus        82 ~~G~~i~~~~~~~~~~~~~~~~~~DPdG~~iei~~~~~~  120 (131)
T cd08343          82 ANGIQIEFGPGRHGPGNNLFLYFRDPDGNRVELSAEMYR  120 (131)
T ss_pred             HcCCeeEECCCccCCCCcEEEEEECCCCCEEEEEcCCcc
Confidence            999987          24678999999999999987654

This family contains the C-terminal, catalytic domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this family are

>cd06587 Glo_EDI_BRP_like This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins

Probab=99.30  E-value=1e-10  Score=72.51  Aligned_cols=87  Identities=28%  Similarity=0.364  Sum_probs=59.7

Q ss_pred             EEecCCCHHHHHHHHHhhhCeEEEEcC----eEEE-EecCCC----CCccc-c---CCCcceEEEEEeCCHHHHHHHHHh
Q 044588           17 LLVEESKATNVVQFYKTTSGAQLEIAG----STFL-VSNFSN----DSAAA-K---NMGIGCVLCLEIDDVEAALAKAMS   83 (117)
Q Consensus        17 L~v~~~D~~~a~~FY~~~fG~~l~~~~----~~l~-~~~~~~----~g~~~-~---~~~~~~~l~l~v~dvd~~~~~~~~   83 (117)
                      |.++  |.+++.+||+++||.+.....    .... +.....    ...+. .   ......++++.++|+++.++++.+
T Consensus         4 i~~~--d~~~~~~fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~   81 (112)
T cd06587           4 LTVS--DLEAAVAFYEEVLGFEVLFRNGNGGAEFAVLGLGGTRLELFEGDEPAPAPSGGGGVHLAFEVDDVDAAYERLKA   81 (112)
T ss_pred             eeeC--CHHHHHHHHHhccCCEEEEeeccCCEEEEEEecCCceEEEecCCCCCCcccCCCeeEEEEECCCHHHHHHHHHH
Confidence            4555  999999999999995543321    1222 211100    00000 0   122456999999999999999999


Q ss_pred             CCCee---------eceEEEEECCCCCeEEE
Q 044588           84 GGVWA---------TGRVGKVKDPCGFTWLI  105 (117)
Q Consensus        84 ~G~~v---------g~r~~~v~DP~G~~w~l  105 (117)
                      +|+.+         +.+..+++||+|+.|+|
T Consensus        82 ~g~~~~~~~~~~~~~~~~~~~~Dp~G~~~~~  112 (112)
T cd06587          82 AGVEVLGEPREEPWGGRVAYFRDPDGNLIEL  112 (112)
T ss_pred             cCCcccCCCcCCCCCcEEEEEECCCCcEEeC
Confidence            99877         35788999999999985

This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). Type I extradiol dioxygenases catalyze the incorporation of both atoms of molecular oxygen into aromatic substrates, which results in the cleavage of aromatic rings. They are key enzymes in the degradation of aromatic compounds. Type I extradiol dioxygenases include class I and class II enzymes. Class I and II enzymes show sequence similarity; the two-domain clas

>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase

Probab=99.30  E-value=1.5e-10  Score=75.00  Aligned_cols=94  Identities=18%  Similarity=0.156  Sum_probs=63.4

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc--CeEEEEec--CCC-CCc--cccCCCcceEEEEEeC---CHHHHHHHHHh
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA--GSTFLVSN--FSN-DSA--AAKNMGIGCVLCLEID---DVEAALAKAMS   83 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~--~~~l~~~~--~~~-~g~--~~~~~~~~~~l~l~v~---dvd~~~~~~~~   83 (117)
                      ...|.|+  |+++|.+||+++||.++...  +....+..  ... ...  .........++++.++   |++++++++.+
T Consensus         7 hv~l~v~--Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~hiaf~v~~~~dv~~~~~~l~~   84 (122)
T cd07265           7 HVQLRVL--DLEEAIKHYREVLGLDEVGRDDQGRVYLKAWDEFDHHSIVLREADTAGLDFMGFKVLDDADLEKLEARLQA   84 (122)
T ss_pred             EEEEEeC--CHHHHHHHHHhccCCEeeeecCCceEEEEccCCCcccEEEeccCCCCCeeEEEEEeCCHHHHHHHHHHHHH
Confidence            3467777  99999999999999765432  22333321  111 000  0111112347888886   88999999999


Q ss_pred             CCCee---------e-ceEEEEECCCCCeEEEeccc
Q 044588           84 GGVWA---------T-GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        84 ~G~~v---------g-~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +|+++         + .+..+++||+||.|+|.+..
T Consensus        85 ~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iE~~~~~  120 (122)
T cd07265          85 YGVAVERIPAGELPGVGRRVRFQLPSGHTMELYADK  120 (122)
T ss_pred             CCCcEEEcccCCCCCCceEEEEECCCCCEEEEEEec
Confidence            99876         1 35789999999999998754

This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do

>cd08364 FosX FosX, a fosfomycin resistance protein, catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of configuration at C1

Probab=99.28  E-value=1.4e-10  Score=76.62  Aligned_cols=88  Identities=15%  Similarity=0.089  Sum_probs=60.9

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc-----------------CeEEEEecCCCCCccccCCCcceEEEEEeC--CHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA-----------------GSTFLVSNFSNDSAAAKNMGIGCVLCLEID--DVE   75 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~-----------------~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~--dvd   75 (117)
                      ..|.|+  |++++++||+++||......                 +..+.+...   .. . ..+...++.|.|+  |++
T Consensus         8 v~l~V~--dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~---~~-~-~~~~~~Hiaf~v~~~~ld   80 (131)
T cd08364           8 ITLIVK--DLNKTTAFLQNIFNAREVYSSGDKTFSLSKEKFFLIGGLWIAIMEG---DS-L-QERTYNHIAFKISDSDVD   80 (131)
T ss_pred             EEEEeC--CHHHHHHHHHHHhCCeeEEecccccccccceeEEEcCCeEEEEecC---CC-C-CCCCceEEEEEcCHHHHH
Confidence            346666  99999999999999543221                 111112111   11 1 1112347888887  799


Q ss_pred             HHHHHHHhCCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           76 AALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        76 ~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++++++.++|..+         +++..+++||+||.|+|.+..
T Consensus        81 ~~~~~l~~~gv~~~~~~~~~~~~g~~~yf~DPdG~~iEl~~~~  123 (131)
T cd08364          81 EYTERIKALGVEMKPPRPRVQGEGRSIYFYDFDNHLFELHTGT  123 (131)
T ss_pred             HHHHHHHHCCCEEecCCccccCCceEEEEECCCCCEEEEecCC
Confidence            9999999999887         257889999999999998754

This subfamily family contains FosX, a fosfomycin resistant protein. Fosfomycin inhibits the enzyme UDP-Nacetylglucosamine-3-enolpyruvyltransferase (MurA), which catalyzes the first committed step in bacterial cell wall biosynthesis. FosX catalyzes the addition of a water molecule to the C1 position of the antibiotic with inversion of the configuration at C1 in the presence of Mn(II). The hydrated fosfomycin loses the inhibition activity. FosX is evolutionarily related to glyoxalase I and type I extradiol dioxygenases.

>cd07266 HPCD_N_class_II N-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD); belongs to the type I class II family of extradiol dioxygenases

Probab=99.28  E-value=1.1e-10  Score=75.32  Aligned_cols=93  Identities=18%  Similarity=0.223  Sum_probs=62.5

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCC--C-C--CccccCCCcceEEEEEe---CCHHHHHHHHHhCC
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFS--N-D--SAAAKNMGIGCVLCLEI---DDVEAALAKAMSGG   85 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~--~-~--g~~~~~~~~~~~l~l~v---~dvd~~~~~~~~~G   85 (117)
                      ..|.|+  |++++.+||+++||.++... +....+....  . .  ...........++.+.|   +|+++.++++.++|
T Consensus         8 i~l~v~--d~~~~~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hi~~~v~~~~dv~~~~~~l~~~g   85 (121)
T cd07266           8 VELRVT--DLEKSREFYVDVLGLVETEEDDDRIYLRGLEEFIHHSLVLTKAPVAGLGHIAFRVRSEEDLDKAEAFFQELG   85 (121)
T ss_pred             EEEEcC--CHHHHHHHHHhccCCEEeccCCCeEEEEecCCCceEEEEEeeCCCCceeEEEEECCCHHHHHHHHHHHHHcC
Confidence            345566  99999999999999776533 2232222110  0 0  00011111345677877   58899999999999


Q ss_pred             Cee---------e-ceEEEEECCCCCeEEEeccc
Q 044588           86 VWA---------T-GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        86 ~~v---------g-~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .++         + .+.+++.||+||.|+++...
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~DPdG~~ve~~~~~  119 (121)
T cd07266          86 LPTEWVEAGEEPGQGRALRVEDPLGFPIEFYAEM  119 (121)
T ss_pred             CCcccccCCcCCCCccEEEEECCCCCEEEEEecc
Confidence            876         2 46889999999999998654

This subfamily contains the N-terminal, non-catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a differ

>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins

Probab=99.26  E-value=2.2e-10  Score=73.71  Aligned_cols=90  Identities=17%  Similarity=0.180  Sum_probs=59.4

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc----C----eEEEEecC------------CCCCcc-ccCCCc-ceEEEEEeC
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA----G----STFLVSNF------------SNDSAA-AKNMGI-GCVLCLEID   72 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~----~----~~l~~~~~------------~~~g~~-~~~~~~-~~~l~l~v~   72 (117)
                      ..|.|+  |++++++||+++||.+....    +    ..+.+...            .+.... ...... -.+++|.++
T Consensus         5 v~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~hi~f~v~   82 (126)
T cd08346           5 VTLITR--DAQETVDFYTDVLGLRLVKKTVNQDDPGTYHLFFGDGLGSPGTLLTFFEWPDAGPKGRRGPGQIHHIAFSVP   82 (126)
T ss_pred             EEEEcC--ChhHhHHHHHHccCCEEeeeEeccCCCceEEEEEecCCCCCCCEEEEEecCCCCCCCCCCCCcEEEEEEEcC
Confidence            356677  99999999999999544311    1    11222211            000000 011112 248889887


Q ss_pred             ---CHHHHHHHHHhCCCee-------eceEEEEECCCCCeEEEe
Q 044588           73 ---DVEAALAKAMSGGVWA-------TGRVGKVKDPCGFTWLIY  106 (117)
Q Consensus        73 ---dvd~~~~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~  106 (117)
                         |++++++++.++|+++       +.+.++++||+||.|+|.
T Consensus        83 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~DP~G~~iE~~  126 (126)
T cd08346          83 SEASLDAWRERLRAAGVPVSGVVDHFGERSIYFEDPDGLRLELT  126 (126)
T ss_pred             CHHHHHHHHHHHHHcCCcccceEeecceEEEEEECCCCCEEEeC
Confidence               5799999999999887       457889999999999974

The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.

>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain

Probab=99.26  E-value=2.1e-10  Score=73.25  Aligned_cols=91  Identities=21%  Similarity=0.241  Sum_probs=61.9

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecC--CCCC--ccccCCCcceEEEEEeC---CHHHHHHHHHhCCCe
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNF--SNDS--AAAKNMGIGCVLCLEID---DVEAALAKAMSGGVW   87 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~--~~~g--~~~~~~~~~~~l~l~v~---dvd~~~~~~~~~G~~   87 (117)
                      .|.++  |++++++||+++||.++... +....+...  ....  ..........++.|.|+   ++++.++++.++|++
T Consensus         7 ~l~v~--d~~~~~~FY~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~v~~~~~v~~~~~~l~~~g~~   84 (117)
T cd07240           7 ELEVP--DLERALEFYTDVLGLTVLDRDAGSVYLRCSEDDHHSLVLTEGDEPGVDALGFEVASEEDLEALAAHLEAAGVA   84 (117)
T ss_pred             EEecC--CHHHHHHHHHhccCcEEEeecCCeEEEecCCCCcEEEEEEeCCCCCceeEEEEcCCHHHHHHHHHHHHHcCCc
Confidence            45566  99999999999999766543 222222211  1100  00111113457788886   788999999999988


Q ss_pred             e---------eceEEEEECCCCCeEEEecc
Q 044588           88 A---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        88 v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +         +.+.++++||+||.|++...
T Consensus        85 ~~~~~~~~~~~~~~~~~~DP~G~~ie~~~~  114 (117)
T cd07240          85 PEEASDPEPGVGRGLRFQDPDGHLLELFVE  114 (117)
T ss_pred             eEEcCccCCCCceEEEEECCCCCEEEEEEc
Confidence            7         34788999999999999865

This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa

>cd07239 BphC5-RK37_C_like C-terminal, catalytic, domain of BphC5 (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacterium Rhodococcus rhodochrous K37 and similar proteins

Probab=99.25  E-value=2.2e-10  Score=77.26  Aligned_cols=94  Identities=17%  Similarity=0.227  Sum_probs=61.9

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE-EcC-eEEEEecCCC-CCcc--ccCCCcceEEEEEeCCHHHH---HHHHHhCCCe
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE-IAG-STFLVSNFSN-DSAA--AKNMGIGCVLCLEIDDVEAA---LAKAMSGGVW   87 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~-~~~-~~l~~~~~~~-~g~~--~~~~~~~~~l~l~v~dvd~~---~~~~~~~G~~   87 (117)
                      .|.|+  |++++++||+++||.+.. ..+ ....+..... ....  ....+...++.|.|+|++++   ++++.++|++
T Consensus         9 ~i~V~--Dle~s~~FY~~~LG~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~hiaf~v~d~~~l~~~~~~l~~~Gi~   86 (144)
T cd07239           9 VLNSP--DVDKTVAFYEDVLGFRVSDWLGDQMAFLRCNSDHHSIAIARGPHPSLNHVAFEMPSIDEVMRGIGRMIDKGID   86 (144)
T ss_pred             EEECC--CHHHHHHHHHhcCCCEEEEeeCCeEEEEECCCCcceEEEccCCCCceEEEEEECCCHHHHHHHHHHHHHcCCc
Confidence            45566  999999999999997653 222 2222221111 1000  11111334789999887766   4899999997


Q ss_pred             e----------eceEEEEECCCCCeEEEecccCC
Q 044588           88 A----------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        88 v----------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      +          +.++.+++||+||.|+|++....
T Consensus        87 ~~~~~~~~~~~~~~~~yf~DPdG~~iE~~~~~~~  120 (144)
T cd07239          87 ILWGPGRHGPGDNTFAYFLDPGGFVIEYTSELEQ  120 (144)
T ss_pred             eeeCCcccCCCCCEEEEEECCCCcEEEeccCceE
Confidence            7          13567899999999999987644

2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). The enzyme contains a N-terminal and a C-terminal domain of similar structure fold, resulting from an ancient gene duplication. BphC belongs to the type I extradiol dioxygenase family, which requires a metal in the active site for its catalytic activity. Polychlorinated biphenyl degrading bacteria demonstrate multiplicity of BphCs. Bacterium Rhodococcus rhodochrous K37 has eight genes encoding BphC enzymes. This family includes the C-terminal domain of BphC5-RrK37. The crystal structure of the protein from Novosphingobium aromaticivorans has a Mn(II)in the active site, although most proteins of type I extradiol dio

>cd07262 Glo_EDI_BRP_like_19 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.25  E-value=1.8e-10  Score=74.56  Aligned_cols=90  Identities=18%  Similarity=0.138  Sum_probs=58.1

Q ss_pred             EEEecCCCHHHHHHHHHhhh---CeEEEEc--CeEEEEecC--CC-------CCccccCCCcceEEEEEeCC---HHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTS---GAQLEIA--GSTFLVSNF--SN-------DSAAAKNMGIGCVLCLEIDD---VEAAL   78 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~f---G~~l~~~--~~~l~~~~~--~~-------~g~~~~~~~~~~~l~l~v~d---vd~~~   78 (117)
                      .|.|+  |.++|++||+++|   |.+....  +..+.+...  ..       ........+...+++|.|+|   +++++
T Consensus         5 ~l~v~--d~~~s~~FY~~~f~~lg~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~hi~f~v~~~~~v~~~~   82 (123)
T cd07262           5 TLGVN--DLERARAFYDAVLAPLGIKRVMEDGPGAVGYGKGGGGPDFWVTKPFDGEPATAGNGTHVAFAAPSREAVDAFH   82 (123)
T ss_pred             EEecC--cHHHHHHHHHHHHhhcCceEEeecCCceeEeccCCCCceEEEeccccCCCCCCCCceEEEEECCCHHHHHHHH
Confidence            45666  9999999999995   6443322  223322221  00       00001112245789999986   78899


Q ss_pred             HHHHhCCCee----------ec--eEEEEECCCCCeEEEec
Q 044588           79 AKAMSGGVWA----------TG--RVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        79 ~~~~~~G~~v----------g~--r~~~v~DP~G~~w~l~~  107 (117)
                      +++.++|+.+          |.  +.++++||+||.|+|+.
T Consensus        83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~DPdG~~ie~~~  123 (123)
T cd07262          83 AAALAAGGTDEGAPGLRPHYGPGYYAAYVRDPDGNKIEAVC  123 (123)
T ss_pred             HHHHHcCCccCCCCCCCCCCCCCeEEEEEECCCCCEEEEeC
Confidence            9999999876          11  24699999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.24  E-value=3.3e-10  Score=73.39  Aligned_cols=100  Identities=16%  Similarity=0.225  Sum_probs=64.4

Q ss_pred             CCCcce-eEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEe-cCC-C-CCcc-ccCCCcc-eEEEEEeC---CHHHH
Q 044588            8 ANFMGM-KPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVS-NFS-N-DSAA-AKNMGIG-CVLCLEID---DVEAA   77 (117)
Q Consensus         8 ~~~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~-~~~-~-~g~~-~~~~~~~-~~l~l~v~---dvd~~   77 (117)
                      |..+++ ...|.|+  |++++.+||+++||.++... +....+. ... . .... ......+ .+++|.++   |++++
T Consensus         2 ~~i~~i~hv~l~v~--dl~~a~~FY~~~lG~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~h~af~v~~~~~v~~~   79 (121)
T cd09013           2 FDIAHLAHVELLTP--KPEESLWFFTDVLGLEETGREGQSVYLRAWGDYEHHSLKLTESPEAGLGHIAWRASSPEALERR   79 (121)
T ss_pred             CCccEeeEEEEEeC--CHHHHHHHHHhCcCCEEEeecCCeEEEEeccCCCccEEEEeeCCCCceEEEEEEcCCHHHHHHH
Confidence            444444 3355566  99999999999999665432 2223222 111 1 0000 0111123 47888886   68899


Q ss_pred             HHHHHhCCCee--------eceEEEEECCCCCeEEEeccc
Q 044588           78 LAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        78 ~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++++.++|.++        +.+..+++||+||.|+|....
T Consensus        80 ~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  119 (121)
T cd09013          80 VAALEASGLGIGWIEGDPGHGKAYRFRSPDGHPMELYWEV  119 (121)
T ss_pred             HHHHHHcCCccccccCCCCCcceEEEECCCCCEEEEEEec
Confidence            99999999876        245679999999999998643

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C

>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase

Probab=99.23  E-value=5.2e-10  Score=71.88  Aligned_cols=92  Identities=11%  Similarity=0.032  Sum_probs=60.6

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEec-CCC-CCc--cccCCCcceEEEEEeCCHHHHHHHHHhCCCee--
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSN-FSN-DSA--AAKNMGIGCVLCLEIDDVEAALAKAMSGGVWA--   88 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~-~~~-~g~--~~~~~~~~~~l~l~v~dvd~~~~~~~~~G~~v--   88 (117)
                      .|.|+  |+++|.+||++ ||.+.... +....+.. ... .-.  .....+.-.++.|.|+|.++..+.+.++|...  
T Consensus         8 ~l~v~--Dl~~s~~FY~~-lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~v~~~~~~~~~~~~~g~~~~~   84 (113)
T cd07267           8 RFEHP--DLDKAERFLTD-FGLEVAARTDDELYYRGYGTDPFVYVARKGEKARFVGAAFEAASRADLEKAAALPGASVID   84 (113)
T ss_pred             EEccC--CHHHHHHHHHH-cCCEEEEecCCeEEEecCCCccEEEEcccCCcCcccEEEEEECCHHHHHHHHHcCCCeeec
Confidence            34555  99999999999 89654322 22222221 111 000  00011123478999999999999888888865  


Q ss_pred             ------eceEEEEECCCCCeEEEecccC
Q 044588           89 ------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        89 ------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                            +.+..+++||+||.|+|....+
T Consensus        85 ~~~~~~~~~~~~~~DPdG~~iEl~~~~~  112 (113)
T cd07267          85 DLEAPGGGKRVTLTDPDGFPVELVYGQE  112 (113)
T ss_pred             CCCCCCCceEEEEECCCCCEEEEEeccc
Confidence                  4678899999999999986543

This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd07242 Glo_EDI_BRP_like_6 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.22  E-value=7.1e-10  Score=72.09  Aligned_cols=91  Identities=19%  Similarity=0.202  Sum_probs=60.5

Q ss_pred             EEEecCCCHHHHHHHHHhhh---CeEEEEc------------CeEEEEecCCCCCcc-ccCCCcc-eEEEEEeC---CHH
Q 044588           16 QLLVEESKATNVVQFYKTTS---GAQLEIA------------GSTFLVSNFSNDSAA-AKNMGIG-CVLCLEID---DVE   75 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~f---G~~l~~~------------~~~l~~~~~~~~g~~-~~~~~~~-~~l~l~v~---dvd   75 (117)
                      .|.++  |++++.+||+++|   |.++...            +..+.+......... ....+.+ .++++.|+   |++
T Consensus         6 ~i~v~--d~~~~~~Fy~~~l~~~G~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~g~~hia~~v~~~~d~~   83 (128)
T cd07242           6 ELTVR--DLERSRAFYDWLLGLLGFEEVKEWEDGRSWRAGDGGTYLVLQQADGESAGRHDRRNPGLHHLAFRAPSREAVD   83 (128)
T ss_pred             EEEeC--CHHHHHHHHHHHHhhcCCEEEEeeccCceEEecCCceEEEEEecccCCCcccccCCcCeeEEEEEcCCHHHHH
Confidence            56666  9999999999999   9544321            122223221110010 0011133 47888886   588


Q ss_pred             HHHHHHHhCCCee------------eceEEEEECCCCCeEEEecc
Q 044588           76 AALAKAMSGGVWA------------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        76 ~~~~~~~~~G~~v------------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++++++.++|+++            +.+.++++||+|+.++|+.|
T Consensus        84 ~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~DpdG~~ie~~~~  128 (128)
T cd07242          84 ELYARLAKRGAEILYAPREPYAGGPGYYALFFEDPDGIRLELVAP  128 (128)
T ss_pred             HHHHHHHHcCCeEecCCcccccCCCcEEEEEEECCCCcEEEEEeC
Confidence            9999999999987            23577999999999999865

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.

>COG3607 Predicted lactoylglutathione lyase [General function prediction only]

Probab=99.22  E-value=1.7e-10  Score=75.86  Aligned_cols=93  Identities=19%  Similarity=0.228  Sum_probs=64.5

Q ss_pred             ceeEEEEecCCCHHHHHHHHHhhhC------------eEEEEcC-eEEEEecCCC---C---CccccCCCcceEEEEEeC
Q 044588           12 GMKPQLLVEESKATNVVQFYKTTSG------------AQLEIAG-STFLVSNFSN---D---SAAAKNMGIGCVLCLEID   72 (117)
Q Consensus        12 ~~~p~L~v~~~D~~~a~~FY~~~fG------------~~l~~~~-~~l~~~~~~~---~---g~~~~~~~~~~~l~l~v~   72 (117)
                      .+.-+|.|.  |++++.+||+. +|            +.+.+++ ..+||.....   .   .......++.+.++|.+.
T Consensus         4 mIFvNLPVk--DL~~S~~Fy~a-lGfk~Npq~sde~a~~mi~~~ni~vMLL~~~~fq~F~~~~i~dt~~s~evli~ls~~   80 (133)
T COG3607           4 MIFVNLPVK--DLEASKAFYTA-LGFKFNPQFSDEDAACMIISDNIFVMLLEEARFQTFTKRQIADTTKSREVLISLSAG   80 (133)
T ss_pred             EEEEecchh--hHHHHHHHHHH-hCcccCCCcccccceeEEEeccEEEEEeccHHhhhhcccccccccCCceEEEEeccC
Confidence            456778888  99999999997 56            3333443 3455543321   1   111112236688889875


Q ss_pred             ---CHHHHHHHHHhCCCee-------eceEE-EEECCCCCeEEEec
Q 044588           73 ---DVEAALAKAMSGGVWA-------TGRVG-KVKDPCGFTWLIYS  107 (117)
Q Consensus        73 ---dvd~~~~~~~~~G~~v-------g~r~~-~v~DP~G~~w~l~~  107 (117)
                         ++|+..++++++|+.+       |..|+ .+.|||||.|++.-
T Consensus        81 s~eevd~~v~ka~eaGGk~~~~~~d~gfMYg~~fqDpDGh~wE~l~  126 (133)
T COG3607          81 SREEVDELVDKALEAGGKPANEPQDEGFMYGRSFQDPDGHVWEFLW  126 (133)
T ss_pred             cHHHHHHHHHHHHHcCCCCCCCccccccccceeeeCCCCCeEEEEE
Confidence               7889999999999988       44444 89999999999853

>cd07249 MMCE Methylmalonyl-CoA epimerase (MMCE)

Probab=99.20  E-value=6.2e-10  Score=71.85  Aligned_cols=90  Identities=20%  Similarity=0.264  Sum_probs=58.6

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE-----------------cCeEEEEecCCCCCccc----cCCCc-ceEEEEEeCC
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI-----------------AGSTFLVSNFSNDSAAA----KNMGI-GCVLCLEIDD   73 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~-----------------~~~~l~~~~~~~~g~~~----~~~~~-~~~l~l~v~d   73 (117)
                      .|.++  |++++.+||+++||.+...                 ++..+.+........+.    ...+. ..+++|.|+|
T Consensus         5 ~l~v~--d~~~~~~fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~g~~h~~f~v~d   82 (128)
T cd07249           5 GIAVP--DLEAAIKFYRDVLGVGPWEEEEVPPEQGVRVAFLGLGNVQIELIEPLDDDSPIAKFLEKRGEGLHHIAFEVDD   82 (128)
T ss_pred             EEEeC--CHHHHHHHHHHhhCCCCccccccCcccccEEEEEEcCCEEEEEEEECCCCCcHHHHHhcCCCceEEEEEEeCC
Confidence            46666  9999999999999933321                 12223332221101110    01123 3579999999


Q ss_pred             HHHHHHHHHhCCCee---------eceEEEEECCC---CCeEEEec
Q 044588           74 VEAALAKAMSGGVWA---------TGRVGKVKDPC---GFTWLIYS  107 (117)
Q Consensus        74 vd~~~~~~~~~G~~v---------g~r~~~v~DP~---G~~w~l~~  107 (117)
                      ++++++++.++|+++         +++.+.+.||+   |+.|+|++
T Consensus        83 ~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~d~~~~~g~~iE~~~  128 (128)
T cd07249          83 IDAALARLKAQGVRLLQEGPRIGAGGKRVAFLHPKDTGGVLIELVE  128 (128)
T ss_pred             HHHHHHHHHHCCCeeeccCCCccCCCCEEEEEecCCCceEEEEecC
Confidence            999999999999987         34555555555   99999874

MMCE, also called methylmalonyl-CoA racemase (EC 5.1.99.1) interconverts (2R)-methylmalonyl-CoA and (2S)-methylmalonyl-CoA. MMCE has been found in bacteria, archaea, and in animals. In eukaryotes, MMCE is an essential enzyme in a pathway that converts propionyl-CoA to succinyl-CoA, and is important in the breakdown of odd-chain length fatty acids, branched-chain amino acids, and other metabolites. In bacteria, MMCE participates in the reverse pathway for propionate fermentation, glyoxylate regeneration, and the biosynthesis of polyketide antibiotics. MMCE is closely related to glyoxalase I and type I extradiol dioxygenases.

>cd07257 THT_oxygenase_C The C-terminal domain of 2,4,5-Trihydroxytoluene (THT) oxygenase, which is an extradiol dioxygenease in the 2,4-dinitrotoluene (DNT) degradation pathway

Probab=99.20  E-value=4e-10  Score=76.58  Aligned_cols=93  Identities=17%  Similarity=0.103  Sum_probs=61.6

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE----Ec--C-eEEEEe--cCC-C---C-Cc--cccCCCcceEEEEEeCCHHHHH-
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE----IA--G-STFLVS--NFS-N---D-SA--AAKNMGIGCVLCLEIDDVEAAL-   78 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~----~~--~-~~l~~~--~~~-~---~-g~--~~~~~~~~~~l~l~v~dvd~~~-   78 (117)
                      .|.|+  |+++|++||+++||.++.    ..  + ..+.+.  +.. .   . ..  ...+.+.--+|+|.|+|++++. 
T Consensus         6 ~l~V~--Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~g~~Hiaf~v~die~~~~   83 (153)
T cd07257           6 VLEVP--DFAASFDWYTETFGLKPSDVIYLPGPGNPVAAFLRLDRGEEYVDHHTLALAQGPESGVHHAAFEVHDFDAQGL   83 (153)
T ss_pred             EEecC--CHHHHHHHHHHhcCCeEEeeEecCCCCCcEEEEEecCCCCCcccchHHHHhcCCCCceeEEEEEcCCHHHHHH
Confidence            45666  999999999999995542    11  1 122222  110 0   0 00  0111112358999999999885 


Q ss_pred             --HHHHhCCCee--e--------ceEEEEECCCCCeEEEecccC
Q 044588           79 --AKAMSGGVWA--T--------GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        79 --~~~~~~G~~v--g--------~r~~~v~DP~G~~w~l~~~~~  110 (117)
                        ++|.++|.++  +        .++.+++||+||.|+|.....
T Consensus        84 ~~~~L~~~Gv~v~~~~g~~~~g~~~~~y~~DPdG~~iEl~~~~~  127 (153)
T cd07257          84 GHDYLREKGYEHVWGVGRHILGSQIFDYWFDPWGFIVEHYTDGD  127 (153)
T ss_pred             HHHHHHHCCCcEeecCCccCCCCCEEEEEECCCCCEEEEEcCce
Confidence              9999999987  1        346799999999999987653

This subfamily contains the C-terminal, catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.

>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases

Probab=99.19  E-value=9.1e-10  Score=73.29  Aligned_cols=91  Identities=16%  Similarity=0.272  Sum_probs=59.2

Q ss_pred             eeEEEEecCCCHHHHHHHHHhhhCeEEEE----c------------Ce-E-EEEe--cC-CC--------CCccccCCCc
Q 044588           13 MKPQLLVEESKATNVVQFYKTTSGAQLEI----A------------GS-T-FLVS--NF-SN--------DSAAAKNMGI   63 (117)
Q Consensus        13 ~~p~L~v~~~D~~~a~~FY~~~fG~~l~~----~------------~~-~-l~~~--~~-~~--------~g~~~~~~~~   63 (117)
                      +...|.|.  |+++|++||+++||.++..    .            +. . +++.  +. ..        .+......+.
T Consensus         4 ~Hv~irV~--DlerSi~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~lEL~~n~~~~~~~~g~   81 (127)
T cd08358           4 LHFVFKVG--NRNKTIKFYREVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMIGYGPEDDHFVVELTYNYGIGDYELGN   81 (127)
T ss_pred             EEEEEEeC--CHHHHHHHHHHhcCCEEEeeecCccccccccccCCCCcEEEEEEecCCCCCccEEEeEecCCCCCCCCCC
Confidence            45678888  9999999999999965421    1            11 1 2221  11 10        0111112234


Q ss_pred             ceEEEEEeCCHHHHHHHHHhCCCee---eceEEEEECCCCCeEEEec
Q 044588           64 GCVLCLEIDDVEAALAKAMSGGVWA---TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        64 ~~~l~l~v~dvd~~~~~~~~~G~~v---g~r~~~v~DP~G~~w~l~~  107 (117)
                      + ++.|.|++. .+.+++.+.|..+   ...+++++||+|+.++|..
T Consensus        82 ~-~~hlav~~~-d~~~~l~~~Gv~~~~~~~~~~fi~DPDG~~ie~~~  126 (127)
T cd08358          82 D-FLGITIHSK-QAVSNAKKHNWPVTEVEDGVYEVKAPGGYKFYLID  126 (127)
T ss_pred             C-EEEEEEECH-HHHHHHHHCCCceecCCCCEEEEECCCCCEEEEec
Confidence            4 677777777 4559999999888   2249999999999999863

This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.

>cd08360 MhqB_like_C C-terminal domain of Burkholderia sp

Probab=99.17  E-value=1.1e-09  Score=72.39  Aligned_cols=93  Identities=14%  Similarity=0.205  Sum_probs=60.2

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc--CeEEEEecC--CC-CC---ccccCCCcc-eEEEEEeCCHHHHH---HHHHh
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA--GSTFLVSNF--SN-DS---AAAKNMGIG-CVLCLEIDDVEAAL---AKAMS   83 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~--~~~l~~~~~--~~-~g---~~~~~~~~~-~~l~l~v~dvd~~~---~~~~~   83 (117)
                      .|.|+  |++++.+||+++||.++.-.  .....+...  .. ..   ........+ .+|.|.|+|++++.   +++.+
T Consensus         8 ~l~v~--dl~~s~~FY~~vlGl~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~g~~hiaf~v~d~~~~~~~~~~l~~   85 (134)
T cd08360           8 VLFVP--DVEAAEAFYRDRLGFRVSDRFKGRGAFLRAAGGGDHHNLFLIKTPAPMAGFHHAAFEVGDIDEVMLGGNHMLR   85 (134)
T ss_pred             EEEcC--CHHHHHHHHHHhcCCEEEEEecCcEEEEECCCCCCCcEEEEecCCCCCCcceEEEEEeCCHHHHHHHHHHHHH
Confidence            45666  99999999999999665321  112222111  00 00   000111133 48999999888665   69999


Q ss_pred             CCCee----------eceEEEEECCCCCeEEEecccC
Q 044588           84 GGVWA----------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        84 ~G~~v----------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +|.++          +.++.+++||+|+.++|.....
T Consensus        86 ~G~~~~~~~~~~~~~~~~~~y~~DP~G~~iEl~~~~~  122 (134)
T cd08360          86 AGYQTGWGPGRHRIGSNYFWYFRDPWGGEVEYGADMD  122 (134)
T ss_pred             cCCccccCCCCcCCCccEEEEEECCCCCEEEEEcccc
Confidence            99986          1245799999999999997543

NF100 MhqB and similar proteins; MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. This subfamily contains the C-terminal, catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07237 BphC1-RGP6_C_like C-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1

Probab=99.15  E-value=1.6e-09  Score=73.70  Aligned_cols=94  Identities=18%  Similarity=0.113  Sum_probs=61.7

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE----c-----CeEEEEe--cCCCCCcc--ccCCCcc-eEEEEEeCCHH---HH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI----A-----GSTFLVS--NFSNDSAA--AKNMGIG-CVLCLEIDDVE---AA   77 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~----~-----~~~l~~~--~~~~~g~~--~~~~~~~-~~l~l~v~dvd---~~   77 (117)
                      -.|.|+  |++++++||+++||.++..    .     +..+.+.  +.......  ......+ .+|+|.|+|++   ++
T Consensus        13 i~l~v~--Dl~~a~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~g~~Hiaf~V~d~~~l~~~   90 (154)
T cd07237          13 VVLATP--DPDEAHAFYRDVLGFRLSDEIDIPLPPGPTARVTFLHCNGRHHSLALAEGPGPKRIHHLMLEVTSLDDVGRA   90 (154)
T ss_pred             EEEEeC--CHHHHHHHHHHccCCEEEEEEcccCCCCCcceEEEEEeCCCCCCEEEEcCCCCceeEEEEEEcCCHHHHHHH
Confidence            355666  9999999999999966532    1     1123222  21111110  1111123 48999997654   68


Q ss_pred             HHHHHhCCCee----------eceEEEEECCCCCeEEEecccC
Q 044588           78 LAKAMSGGVWA----------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        78 ~~~~~~~G~~v----------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++++.++|.++          +.+.++++||+|+.|+|.....
T Consensus        91 ~~~L~~~G~~v~~~~~~~~~~~~~~~y~~DPdG~~iEl~~~~~  133 (154)
T cd07237          91 YDRVRARGIPIAMTLGRHTNDRMLSFYVRTPSGFAIEYGWGGR  133 (154)
T ss_pred             HHHHHHcCCceeccCCccCCCCcEEEEEECCCCcEEEeccCce
Confidence            99999999987          2367889999999999987643

13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the C-terminal, catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its C-terminal repeat is represented in thi

>cd07258 PpCmtC_C C-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC)

Probab=99.14  E-value=1.8e-09  Score=72.66  Aligned_cols=96  Identities=13%  Similarity=-0.008  Sum_probs=63.4

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE--cCeEEEEecC-CCCCc--cc-cCCCcc-eEEEEEeCC---HHHHHHHHHhCC
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI--AGSTFLVSNF-SNDSA--AA-KNMGIG-CVLCLEIDD---VEAALAKAMSGG   85 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~--~~~~l~~~~~-~~~g~--~~-~~~~~~-~~l~l~v~d---vd~~~~~~~~~G   85 (117)
                      .|.|+  |++++.+||+++||.++.-  ++..+.+... ....+  .. +....+ -+++|.|+|   ++++++++.++|
T Consensus         4 ~l~V~--Dle~s~~Fy~~vLG~~~~~~~~~~~~~l~~~~~~~~h~~~~~~~~~~gl~Hiaf~v~~~~~v~~~~~~l~~~G   81 (141)
T cd07258           4 VIGSE--NFEASRDSLVEDFGFRVSDLIEDRIVFMRCHPNPFHHTFAVGPASSSHFHHVNFMVTDIDDIGKALYRIKAHD   81 (141)
T ss_pred             EEecC--CHHHHHHHHHhcCCCEeeeeeCCEEEEEEcCCCCCcceeeeccCCCCceEEEEEECCCHHHHHHHHHHHHHCC
Confidence            46677  9999999999999976532  2222233211 11001  11 111123 488898875   467899999999


Q ss_pred             Cee----------eceEEEEECCCCCeEEEecccCCCC
Q 044588           86 VWA----------TGRVGKVKDPCGFTWLIYSPVKKCA  113 (117)
Q Consensus        86 ~~v----------g~r~~~v~DP~G~~w~l~~~~~~~~  113 (117)
                      .++          +.++++++||+|+.|+|+...+..+
T Consensus        82 ~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~~~~  119 (141)
T cd07258          82 VKVVFGPGRHPPSDSIFFYFLDPDGITVEYSFGMEEFA  119 (141)
T ss_pred             CcEEeCCceECCCCCEEEEEECCCCCEEEEEeCcceec
Confidence            976          2367899999999999988765443

This subfamily contains the C-terminal, catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as for other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.

>cd07243 2_3_CTD_C C-terminal domain of catechol 2,3-dioxygenase

Probab=99.14  E-value=1e-09  Score=73.81  Aligned_cols=92  Identities=15%  Similarity=0.081  Sum_probs=60.2

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEE--EE---cCe-EE--EEe-cCCCCCccc-cCCCcc-eEEEEEeCCHHH---HHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQL--EI---AGS-TF--LVS-NFSNDSAAA-KNMGIG-CVLCLEIDDVEA---ALAK   80 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l--~~---~~~-~l--~~~-~~~~~g~~~-~~~~~~-~~l~l~v~dvd~---~~~~   80 (117)
                      ..|.|+  |++++++||+++||.++  +.   .+. .+  .+. ....+.... ..++.+ .+++|.|+|+++   ++++
T Consensus        10 v~l~v~--Dle~s~~FY~~vLGf~~~~~~~~~~~~~~~~~~l~~~~~~h~~~~~~~~~~~~~Hiaf~v~d~~~l~~~~~~   87 (143)
T cd07243          10 CLLTGE--DIAETTRFFTDVLDFYLAERVVDPDGGTRVGSFLSCSNKPHDIAFVGGPDGKLHHFSFFLESWEDVLKAGDI   87 (143)
T ss_pred             EEEecC--CHHHHHHHHHHhcCCEEEEEEecCCCCeEEEEEEecCCCcceEEEecCCCCCceEEEEEcCCHHHHHHHHHH
Confidence            346666  99999999999999653  11   121 12  221 111111111 111234 489999998876   6789


Q ss_pred             HHhCCCee-------e---ceEEEEECCCCCeEEEecc
Q 044588           81 AMSGGVWA-------T---GRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        81 ~~~~G~~v-------g---~r~~~v~DP~G~~w~l~~~  108 (117)
                      +.++|.++       +   .+..+++||+||.|+|...
T Consensus        88 l~~~Gv~i~~~p~~~~~~~~~~~yf~DPdG~~iEl~~~  125 (143)
T cd07243          88 ISMNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFAG  125 (143)
T ss_pred             HHHcCCceEECCcCCCCCCceEEEEECCCCCEEEEecC
Confidence            99999876       1   3678999999999999753

This subfamily contains the C-terminal, catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the C-terminal domain.

>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein

Probab=99.13  E-value=3.7e-10  Score=72.42  Aligned_cols=87  Identities=18%  Similarity=0.241  Sum_probs=52.6

Q ss_pred             EEecCCCHHHHHHHHHhhhCeEEEEc------CeE--EEEecCCCC-----Cccc-cCCCc--------ceEEEEE---e
Q 044588           17 LLVEESKATNVVQFYKTTSGAQLEIA------GST--FLVSNFSND-----SAAA-KNMGI--------GCVLCLE---I   71 (117)
Q Consensus        17 L~v~~~D~~~a~~FY~~~fG~~l~~~------~~~--l~~~~~~~~-----g~~~-~~~~~--------~~~l~l~---v   71 (117)
                      |.+.  |++++++||+++||.++...      +..  .........     .... .....        ..++.+.   +
T Consensus         7 i~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~   84 (128)
T PF00903_consen    7 IRVK--DLEKAIDFYTDVLGFRLVEESDNDGEGGDLRIAFLRIGEGHIELFLNPSPPPRASGHSFPEHGGHHIAFLAFDV   84 (128)
T ss_dssp             EEES--CHHHHHHHHHHTTTSEEEEEEEEESTTEEEEEEEEESTSSCEEEEEEESSSSSSEEEHHHSHTSEEEEEEESSH
T ss_pred             EEcC--CHHHHHHHHHHHhCCcEEeeeccccccccccceeecccccceeeeeeccccccccccccccccceeEEEEeccH
Confidence            6677  99999999999999444321      111  111111000     0000 00001        2345554   4


Q ss_pred             CCHHHHHHHHHhCCCee---------eceE-EEEECCCCCeEEE
Q 044588           72 DDVEAALAKAMSGGVWA---------TGRV-GKVKDPCGFTWLI  105 (117)
Q Consensus        72 ~dvd~~~~~~~~~G~~v---------g~r~-~~v~DP~G~~w~l  105 (117)
                      +|++++++++.+.|.++         +..+ .+++||+||.|+|
T Consensus        85 ~dl~~~~~~l~~~g~~~~~~~~~~~~~~~~~~y~~Dp~G~~iE~  128 (128)
T PF00903_consen   85 DDLDAAYERLKAQGVEIVEEPDRYYFGSGYSFYFRDPDGNLIEF  128 (128)
T ss_dssp             HHHHHHHHHHHHTTGEEEEEEEEHSTTCEEEEEEEETTSEEEEE
T ss_pred             HHHHHHHHHHhhcCccEEecCCCCCCCCEEEEEEECCCCCEEEC
Confidence            57889999999999887         3344 3699999999986

; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....

>cd07256 HPCD_C_class_II C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD), which catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate; belongs to the type I class II family of extradiol dioxygenases

Probab=99.10  E-value=2.1e-09  Score=73.54  Aligned_cols=93  Identities=14%  Similarity=0.134  Sum_probs=59.3

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE-----cCe-E-EEEecCC-CCCcc-ccCCCcc-eEEEEEeCC---HHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI-----AGS-T-FLVSNFS-NDSAA-AKNMGIG-CVLCLEIDD---VEAALAKA   81 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~-----~~~-~-l~~~~~~-~~g~~-~~~~~~~-~~l~l~v~d---vd~~~~~~   81 (117)
                      ..|.|+  |+++|++||+++||.++..     .+. . ..+.... ..... ....+.+ .+++|.|+|   +++.+++|
T Consensus         7 v~l~V~--Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~l~~~~~~~~i~l~~~~~~~~~Hiaf~v~~~~~v~~~~~~L   84 (161)
T cd07256           7 FNLRVP--DVDAGLAYYRDELGFRVSEYTEDDDGTTWAAWLHRKGGVHDTALTGGNGPRLHHVAFWVPEPHNIIRTCDLL   84 (161)
T ss_pred             EEEecC--CHHHHHHHHHhccCCEEEEEeccCCCcEEEEEEecCCCcceEEEecCCCCceeEEEEEcCCHHHHHHHHHHH
Confidence            345666  9999999999999965531     111 1 2221111 11010 0111233 478899875   77889999


Q ss_pred             HhCCCee------------eceEEEEECCCCCeEEEeccc
Q 044588           82 MSGGVWA------------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        82 ~~~G~~v------------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .++|+..            +.++.+++||+||.|+|.+..
T Consensus        85 ~~~G~~~~~~~~p~~~g~~~~~~~y~~DPdG~~iEl~~~~  124 (161)
T cd07256          85 AAAGYSDRIERGPGRHGISNAFFLYLRDPDGHRIEIYTGD  124 (161)
T ss_pred             HHcCCCcccccCCCccCCCCceEEEEECCCCCeEEEeecC
Confidence            9999752            134689999999999998643

This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of

>PLN02300 lactoylglutathione lyase

Probab=99.10  E-value=3.1e-09  Score=78.93  Aligned_cols=94  Identities=15%  Similarity=0.157  Sum_probs=65.2

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE----cC--eEEEEec--CCCC----------Ccc-ccCCCcceEEEEEeCCH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI----AG--STFLVSN--FSND----------SAA-AKNMGIGCVLCLEIDDV   74 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~----~~--~~l~~~~--~~~~----------g~~-~~~~~~~~~l~l~v~dv   74 (117)
                      ...|.++  |++++.+||+++||+++..    .+  ..+....  ....          +.. .......++++|.|+|+
T Consensus       157 ~~~l~~~--d~~~a~~Fy~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lel~~~~~~~~~~~g~~~~~i~~~v~di  234 (286)
T PLN02300        157 QVMLRVG--DLDRSIKFYEKAFGMKLLRKRDNPEYKYTIAMMGYGPEDKTTVLELTYNYGVTEYTKGNAYAQIAIGTDDV  234 (286)
T ss_pred             eEEEEeC--CHHHHHHHHHhccCCEEEeeecccccceEEEEEecCCCCCccEEEEeecCCCCccccCCceeEEEEecCCH
Confidence            4566677  9999999999999976631    11  1121111  1000          000 11122345899999999


Q ss_pred             HHHHHHHHhCCCee----------eceEEEEECCCCCeEEEeccc
Q 044588           75 EAALAKAMSGGVWA----------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        75 d~~~~~~~~~G~~v----------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +++++++.++|+++          +.|++.++||+|+.++|.+..
T Consensus       235 ~~~~~~~~~~G~~v~~~p~~~p~~~~~~~~~~DPdG~~i~~~~~~  279 (286)
T PLN02300        235 YKTAEAIKLVGGKITREPGPLPGINTKITACLDPDGWKTVFVDNI  279 (286)
T ss_pred             HHHHHHHHHcCCeEecCCccCCCCceEEEEEECCCCCEEEEEccc
Confidence            99999999999987          247899999999999998764

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=99.07  E-value=3.6e-09  Score=78.28  Aligned_cols=95  Identities=15%  Similarity=0.161  Sum_probs=64.8

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecC-C--CCCc--cccCCCcceEEEEEeC---CHHHHHHHHHhC
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNF-S--NDSA--AAKNMGIGCVLCLEID---DVEAALAKAMSG   84 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~-~--~~g~--~~~~~~~~~~l~l~v~---dvd~~~~~~~~~   84 (117)
                      ...|.|+  |++++++||+++||.++... +....+... .  ....  .........++.+.|+   |++++++++.++
T Consensus         7 hv~l~v~--Dl~~s~~FY~~vLGl~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~hiaf~v~~~~dl~~~~~~l~~~   84 (294)
T TIGR02295         7 HVELRVT--DLDKSREFYVDLLGFRETESDKEYIYLRGIEEFQHHSLVLTKAPSAALSYIGFRVSKEEDLDKAADFFQKL   84 (294)
T ss_pred             EEEEEeC--CHHHHHHHHHHccCCEEEEecCCeEEEeccCcCCceEEEeeeCCCcCccEEEEEeCCHHHHHHHHHHHHhc
Confidence            4567777  99999999999999776432 222222211 0  0000  0111112347888886   889999999999


Q ss_pred             CCee-------eceEEEEECCCCCeEEEecccC
Q 044588           85 GVWA-------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        85 G~~v-------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      |+++       +.+..+++||+||.|+|+....
T Consensus        85 Gv~v~~~~~~~~~~~~~~~DPdG~~iEl~~~~~  117 (294)
T TIGR02295        85 GHPVRLVRDGGQPEALRVEDPFGYPIEFYFEME  117 (294)
T ss_pred             CCcEEeecCCCCceEEEEECCCCCEEEEEEchh
Confidence            9987       3478899999999999987543

The enzyme from Bacillus brevis contains manganese.

>cd09014 BphC-JF8_C_like C-terminal, catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp

Probab=99.06  E-value=5.5e-09  Score=71.93  Aligned_cols=93  Identities=18%  Similarity=0.142  Sum_probs=59.8

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE----c-Ce--EEEEec-CCCC--Cc---cccCCCcceEEEEEeCC---HHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI----A-GS--TFLVSN-FSND--SA---AAKNMGIGCVLCLEIDD---VEAA   77 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~----~-~~--~l~~~~-~~~~--g~---~~~~~~~~~~l~l~v~d---vd~~   77 (117)
                      ...|.|+  |++++++||+++||.++..    . +.  ...+.. ....  ..   .....+.-.+|+|.|+|   +++.
T Consensus         9 Hi~l~V~--Dle~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~hiaf~v~~~~~l~~~   86 (166)
T cd09014           9 HVNLLAS--DVDANRDFMEEVLGFRLREQIRLDNGKEAGAWMSVSNKVHDVAYTRDPAGARGRLHHLAYALDTREDVLRA   86 (166)
T ss_pred             eEEEEcC--CHHHHHHHHHHccCCEEEEEEecCCCceEEEEEeCCCCceeEEEecCCCCCCCCceEEEEECCCHHHHHHH
Confidence            3456777  9999999999999965421    1 11  122211 1100  00   00111123588999985   4588


Q ss_pred             HHHHHhCCCee-------e--c-eEEEEECCCCCeEEEecc
Q 044588           78 LAKAMSGGVWA-------T--G-RVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        78 ~~~~~~~G~~v-------g--~-r~~~v~DP~G~~w~l~~~  108 (117)
                      ++++.++|+++       +  . ++.+++||+||.|+|.+.
T Consensus        87 ~~~l~~~Gv~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~  127 (166)
T cd09014          87 ADIFLENGIFIEAGPGKHGIQQTFFLYVYEPGGNRVELFGG  127 (166)
T ss_pred             HHHHHHcCCccccCCcccCCCCceEEEEECCCCCEEEEEEc
Confidence            99999999886       2  2 247899999999999887

JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C. Th

>PRK01037 trmD tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein; Reviewed

Probab=98.98  E-value=5.9e-09  Score=79.32  Aligned_cols=92  Identities=18%  Similarity=0.157  Sum_probs=64.6

Q ss_pred             CcceeEEEEecCCCHHHHHHHHHhhhCeE-E------EEcCeE-EEEecCCCCCccccCCCcceEEEEEeC---CHHHHH
Q 044588           10 FMGMKPQLLVEESKATNVVQFYKTTSGAQ-L------EIAGST-FLVSNFSNDSAAAKNMGIGCVLCLEID---DVEAAL   78 (117)
Q Consensus        10 ~~~~~p~L~v~~~D~~~a~~FY~~~fG~~-l------~~~~~~-l~~~~~~~~g~~~~~~~~~~~l~l~v~---dvd~~~   78 (117)
                      -..+..+|.|.  |+++|++||+++|+.. +      .+++.. +|+....     .......+.++|.++   +||+..
T Consensus       246 ~~~IfVNLpV~--DL~rS~~FYt~LF~~n~Fsde~a~cm~dtI~vMllt~~-----D~~~~~evLl~Ls~~Sre~VD~lv  318 (357)
T PRK01037        246 PKTFSVVLEVQ--DLRRAKKFYSKMFGLECWDGDKLFLLGKTSLYLQQTKA-----EKKNRGTTTLSLELECEHDFVRFL  318 (357)
T ss_pred             CceEEEEeeeC--CHHHHHHHHHHHhCCCCCCCCccccccCcEEEEEecCC-----CCCCcceEEEEeccCCHHHHHHHH
Confidence            34567888888  9999999999999932 1      112211 2222221     111225678888887   788999


Q ss_pred             HHHHhCCCee-------eceEEEEECCCCCeEEEeccc
Q 044588           79 AKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        79 ~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++++++||+.       |. .-.|.|||||.|++.-..
T Consensus       319 ~~A~aaGG~~~~~~~D~Gf-~rsf~D~DGH~WEi~~~~  355 (357)
T PRK01037        319 RRWEMLGGELGEQADGHFP-LRLVFDLDGHIWVVSCVQ  355 (357)
T ss_pred             HHHHHcCCCCCCCcccccC-cceeECCCCCEEEEEEEe
Confidence            9999999977       44 558999999999997543

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=98.96  E-value=1.7e-08  Score=74.68  Aligned_cols=92  Identities=16%  Similarity=0.091  Sum_probs=59.8

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE--cCeEEE-EecCCCCCcc--ccCCCcceEEEEEeCC---HHHHHHHHHhCCC
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI--AGSTFL-VSNFSNDSAA--AKNMGIGCVLCLEIDD---VEAALAKAMSGGV   86 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~--~~~~l~-~~~~~~~g~~--~~~~~~~~~l~l~v~d---vd~~~~~~~~~G~   86 (117)
                      ..|.|+  |+++|++||+++||.+...  +++... -.+.......  ......-.++.+.|++   ++++.++|.++|.
T Consensus         7 v~l~V~--Dl~~s~~FY~~~LGl~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~f~V~~~~~l~~~~~~L~~~Gv   84 (286)
T TIGR03213         7 LGIGVS--DVDAWREFATEVLGMMVASEGENDALYLRLDSRAHRIAVHPGESDDLAYAGWEVADEAGLDQVKEKLEKAGV   84 (286)
T ss_pred             EEEEeC--CHHHHHHHHHhccCcccccCCCCceEEEEcCCCceEEEEEECCcCCeeeEeeeeCCHHHHHHHHHHHHHcCC
Confidence            345666  9999999999999965432  112221 1121100000  0011122368888887   8899999999998


Q ss_pred             ee------------eceEEEEECCCCCeEEEecc
Q 044588           87 WA------------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        87 ~v------------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++            +.+..+|+||+||.|+|...
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~f~DPdGn~lEl~~~  118 (286)
T TIGR03213        85 AVTVASAAEARERGVLGLIKFTDPGGNPLEIYYG  118 (286)
T ss_pred             ceEECCHHHhhhccceEEEEEECCCCCEEEEEEc
Confidence            76            13678999999999999863

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=98.92  E-value=3e-08  Score=73.75  Aligned_cols=95  Identities=18%  Similarity=0.262  Sum_probs=63.6

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCC---CCCcc-ccCCCcc-eEEEEEeC---CHHHHHHHHHhC
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFS---NDSAA-AKNMGIG-CVLCLEID---DVEAALAKAMSG   84 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~---~~g~~-~~~~~~~-~~l~l~v~---dvd~~~~~~~~~   84 (117)
                      ...|.|+  |++++++||+++||.++... +....+....   ..... ......+ .+++|.|+   |++++++++.++
T Consensus         7 Hi~l~V~--Dle~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~hiaf~v~~~~dl~~~~~~l~~~   84 (303)
T TIGR03211         7 HVELRVL--DLEESLKHYTDVLGLEETGRDGQRVYLKAWDEWDHYSVILTEADTAGLDHMAFKVESEADLERLVKRLEAY   84 (303)
T ss_pred             EEEEEeC--CHHHHHHHHHHhcCCEEeeecCceEEEEeccccccceEeeccCCCCceeEEEEEeCCHHHHHHHHHHHHHc
Confidence            4456677  99999999999999766432 2222222110   00000 0111123 47888887   889999999999


Q ss_pred             CCee----------eceEEEEECCCCCeEEEecccC
Q 044588           85 GVWA----------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        85 G~~v----------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      |.++          ..+..+++||+||.|+|.+...
T Consensus        85 G~~~~~~~~~~~~~~g~~~~~~DPdG~~iEl~~~~~  120 (303)
T TIGR03211        85 GVGTGWIPAGELPGVGRRVRFTLPSGHTMELYAEKE  120 (303)
T ss_pred             CCCeeeccCCCCCCcceEEEEECCCCCEEEEEEccc
Confidence            9876          1366799999999999998654

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR03211 catechol_2_3 catechol 2,3 dioxygenase

Probab=98.88  E-value=4.4e-08  Score=72.89  Aligned_cols=90  Identities=18%  Similarity=0.151  Sum_probs=58.2

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE----Ec-Ce--EE-EEec-CCCC--CccccC-CCcceEEEEEeCC---HHHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE----IA-GS--TF-LVSN-FSND--SAAAKN-MGIGCVLCLEIDD---VEAALAK   80 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~----~~-~~--~l-~~~~-~~~~--g~~~~~-~~~~~~l~l~v~d---vd~~~~~   80 (117)
                      .|.|+  |++++++||+++||.++.    .. +.  .. .+.. ....  .....+ .+.-.+++|.|+|   +++.+++
T Consensus       150 ~l~V~--Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~Hiaf~v~~~~~v~~~~~~  227 (303)
T TIGR03211       150 LLYGE--DVAENTRFFTEVLGFRLTEQVVLGDGKEQAAAWLSVSNKAHDIAFVGDPEPGKLHHVSFFLDSWEDVLKAADV  227 (303)
T ss_pred             eEEeC--CHHHHHHHHHHhcCCEEEeeEEcCCCcEEEEEEEEcCCCCcccceecCCCCCceEEEEEEcCCHHHHHHHHHH
Confidence            45666  999999999999996542    12 21  11 2211 1111  110111 1123489999986   5567889


Q ss_pred             HHhCCCee-------e---ceEEEEECCCCCeEEEec
Q 044588           81 AMSGGVWA-------T---GRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        81 ~~~~G~~v-------g---~r~~~v~DP~G~~w~l~~  107 (117)
                      +.++|.++       +   .+..+++||+||.|+|.+
T Consensus       228 l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~  264 (303)
T TIGR03211       228 MSKNDVSIDIGPTRHGITRGQTIYFFDPSGNRNETFG  264 (303)
T ss_pred             HHhCCCceeeCCcccCCCCceEEEEECCCCCEEEEec
Confidence            99999887       2   357899999999999973

Members of this family all are enzymes active as catechol 2,3 dioxygenase (1.13.11.2), although some members have highly significant activity on catechol derivatives such as 3-methylcatechol, 3-chlorocatechol, and 4-chlorocatechol (see Mars, et al.). This enzyme is also called metapyrocatechase, as it performs a meta-cleavage (an extradiol ring cleavage), in contrast to the ortho-cleavage (intradiol ring cleavage)performed by catechol 1,2-dioxygenase (EC 1.13.11.1), also called pyrocatechase.

>TIGR03213 23dbph12diox 2,3-dihydroxybiphenyl 1,2-dioxygenase

Probab=98.85  E-value=7.8e-08  Score=71.13  Aligned_cols=93  Identities=24%  Similarity=0.174  Sum_probs=60.3

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE------cCe---EE-EE-ecCCCCCc--cccCCCcce-EEEEEeCCHHH---H
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI------AGS---TF-LV-SNFSNDSA--AAKNMGIGC-VLCLEIDDVEA---A   77 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~------~~~---~l-~~-~~~~~~g~--~~~~~~~~~-~l~l~v~dvd~---~   77 (117)
                      ..|.++  |++++.+||+++||.++.-      +++   .+ .+ .+...+..  ...+...++ +++|.|+|.++   .
T Consensus       146 v~l~v~--Dle~s~~FY~~~LGf~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~l~~~~~~~~~~Hiaf~v~d~~~v~~~  223 (286)
T TIGR03213       146 IVLRVP--DVDAALAFYTEVLGFQLSDVIDLPAGPGVTVRPYFLHCNERHHSLAFAAGPSEKRLNHLMLEVDTLDDVGLA  223 (286)
T ss_pred             EEEEcC--CHHHHHHHHHHccCCeEEEeEcccCCCCCcceEEEEEECCCcceEEEecCCCCCceEEEEEEcCCHHHHHHH
Confidence            356666  9999999999999965421      111   12 22 22111111  011111333 79999987766   7


Q ss_pred             HHHHHhCCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           78 LAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        78 ~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++++.++|...         +.++.+++||+|++|++.+..
T Consensus       224 ~~~l~~~G~~~~~~~r~~~~~~~~~y~~DP~G~~iE~~~~~  264 (286)
T TIGR03213       224 LDRVDADGIVASTLGRHTNDHMVSFYVATPSGWLVEYGWGA  264 (286)
T ss_pred             HHHHHHCCCEEecCCcCCCCCeEEEEEECCCCcEEEeecCc
Confidence            99999999843         245789999999999998744

Members of this protein family all have activity as 2,3-dihydroxybiphenyl 1,2-dioxygenase, the third enzyme of a pathway for biphenyl degradation. Many of the extradiol ring-cleaving dioxygenases, to which these proteins belong, act on a range of related substrates. Note that some members of this family may be found operons for toluene or naphthalene degradation, where other activities of the same enzyme may be more significant; the trusted cutoff for this model is set relatively high to exclude most such instances.

>KOG2944 consensus Glyoxalase [Carbohydrate transport and metabolism]

Probab=98.85  E-value=6.1e-08  Score=66.26  Aligned_cols=45  Identities=24%  Similarity=0.375  Sum_probs=39.8

Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCee------ec--eEEEEECCCCCeEEEeccc
Q 044588           65 CVLCLEIDDVEAALAKAMSGGVWA------TG--RVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        65 ~~l~l~v~dvd~~~~~~~~~G~~v------g~--r~~~v~DP~G~~w~l~~~~  109 (117)
                      -+|+|+|+|++++.+++.+.|++.      |.  ..+++.||||+.++|....
T Consensus       117 gHIci~V~di~sac~~lkekGV~f~Kk~~dGk~K~iaF~~dpDgywiei~~~s  169 (170)
T KOG2944|consen  117 GHICIEVDDINSACERLKEKGVRFKKKLKDGKMKPIAFLHDPDGYWIEIELES  169 (170)
T ss_pred             ceEEEEeCCHHHHHHHHHHhCceeeecCCCccccceeEEECCCCCeEEEeecC
Confidence            499999999999999999999988      42  4789999999999997653

>TIGR02295 HpaD 3,4-dihydroxyphenylacetate 2,3-dioxygenase

Probab=98.80  E-value=1.1e-07  Score=70.42  Aligned_cols=93  Identities=17%  Similarity=0.195  Sum_probs=59.2

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEE--E--c-Ce-EEEEecCCC--CCcc-ccCCCcc-eEEEEEeCC---HHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLE--I--A-GS-TFLVSNFSN--DSAA-AKNMGIG-CVLCLEIDD---VEAALAKA   81 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~--~--~-~~-~l~~~~~~~--~g~~-~~~~~~~-~~l~l~v~d---vd~~~~~~   81 (117)
                      ..|.|+  |++++++||+++||.++.  .  . +. ...+.....  +... ....+.+ .+++|.|+|   +++.++++
T Consensus       140 v~l~v~--dl~~a~~Fy~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hiaf~v~d~~~v~~~~~~l  217 (294)
T TIGR02295       140 FNVFVP--DVQRALRFYKEELGFRVTEYTEDDEGNLAAAWLHRKGGVHDIALTNGNGPRLHHIAYWVHDPLNIIKACDIL  217 (294)
T ss_pred             EEEEeC--CHHHHHHHHHHhcCCEEEEEeccCCCcEEEEEEecCCCcCceEeecCCCCceeeEEEEcCCHHHHHHHHHHH
Confidence            345666  999999999999996542  1  1 21 122211111  1110 0111133 489999998   55668999


Q ss_pred             HhCCCe--e--e--------ceEEEEECCCCCeEEEeccc
Q 044588           82 MSGGVW--A--T--------GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        82 ~~~G~~--v--g--------~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .++|.+  +  +        ..+++++||+||.|+|.+..
T Consensus       218 ~~~G~~~~~~~~p~~~~~~~~~~~y~~DP~G~~iEl~~~~  257 (294)
T TIGR02295       218 ASAGLSDSIERGPGRHGVSNAFFLYLRDPDGHRIELYTGD  257 (294)
T ss_pred             HhCCCCcccccCCccCCCCcceEEEEECCCCCEEEEEecc
Confidence            999986  4  1        24679999999999998643

The enzyme from Bacillus brevis contains manganese.

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=98.61  E-value=4.9e-07  Score=57.86  Aligned_cols=71  Identities=20%  Similarity=0.311  Sum_probs=46.0

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeE----------------EEEcCe--EEEEecCCCCCccccCCCcc-eEEEEEeCCHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQ----------------LEIAGS--TFLVSNFSNDSAAAKNMGIG-CVLCLEIDDVEA   76 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~----------------l~~~~~--~l~~~~~~~~g~~~~~~~~~-~~l~l~v~dvd~   76 (117)
                      .+.|+  |+++|++||+++||..                +..+++  .|-+......+......+.+ .+|++.|+|+++
T Consensus         4 ~i~V~--Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~~~~~~~~~gi~Hia~~v~D~d~   81 (109)
T PF13669_consen    4 GIVVP--DLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGDSPLDRGGGGIHHIAFEVDDLDA   81 (109)
T ss_dssp             EEEES---HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTTCHHHHTSSEEEEEEEEESHHHH
T ss_pred             EEEcC--CHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCCcccccCCCCEEEEEEEeCCHHH
Confidence            46777  9999999999999922                122332  23333221111111113355 489999999999


Q ss_pred             HHHHHHhCCCee
Q 044588           77 ALAKAMSGGVWA   88 (117)
Q Consensus        77 ~~~~~~~~G~~v   88 (117)
                      +.+++.++|.++
T Consensus        82 ~~~~l~~~G~~~   93 (109)
T PF13669_consen   82 AIARLEAQGFRV   93 (109)
T ss_dssp             HHHHHHHTTECE
T ss_pred             HHHHHHHCCCEE
Confidence            999999999887

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=98.59  E-value=6.9e-07  Score=65.75  Aligned_cols=94  Identities=18%  Similarity=0.196  Sum_probs=64.1

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCe----------EEEEcCeEEEEecCCCC-CccccCCCcceEEEEEeC---CHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGA----------QLEIAGSTFLVSNFSND-SAAAKNMGIGCVLCLEID---DVEAALAK   80 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~----------~l~~~~~~l~~~~~~~~-g~~~~~~~~~~~l~l~v~---dvd~~~~~   80 (117)
                      ..|.|.  |++++..||++++|.          .+..++..++.....+. +.+......=+++.|-++   |+..+..+
T Consensus        14 v~L~vr--dL~~~~~FY~~ilGL~v~~~~~~~v~L~vgg~~LL~L~q~~~a~~~~~~~aGLyH~AfLlP~r~~L~~~l~h   91 (265)
T COG2514          14 VTLNVR--DLDSMTSFYQEILGLQVLEETDGSVTLGVGGTPLLTLEQFPDARRPPPRAAGLYHTAFLLPTREDLARVLNH   91 (265)
T ss_pred             EEEEec--cHHHHHHHHHHhhCCeeeeccCceEEEeeCCEEEEEEEeCCCCCCCCccccceeeeeeecCCHHHHHHHHHH
Confidence            356677  999999999999992          33445554554443332 222111212368888887   66788999


Q ss_pred             HHhCCCee-e--ce----EEEEECCCCCeEEEecccC
Q 044588           81 AMSGGVWA-T--GR----VGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        81 ~~~~G~~v-g--~r----~~~v~DP~G~~w~l~~~~~  110 (117)
                      +.+.|..+ |  .+    -.++.||+||-|++....+
T Consensus        92 l~~~~~~l~Ga~DH~vSEAlYl~DPEGNGIEiYaDrp  128 (265)
T COG2514          92 LAEEGIPLVGASDHLVSEALYLEDPEGNGIEIYADRP  128 (265)
T ss_pred             HHhcCCcccccCcchhheeeeecCCCCCeEEEEecCC
Confidence            99999887 3  22    3399999999999987643

>COG3565 Predicted dioxygenase of extradiol dioxygenase family [General function prediction only]

Probab=98.53  E-value=3e-06  Score=55.37  Aligned_cols=93  Identities=15%  Similarity=0.138  Sum_probs=60.4

Q ss_pred             EEEecCCCHHHHHHHHHhhhCe----------EEEEcCeEEEE-ecCCCC--Cccc-c---CCCcceEEEEEeCCHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGA----------QLEIAGSTFLV-SNFSND--SAAA-K---NMGIGCVLCLEIDDVEAAL   78 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~----------~l~~~~~~l~~-~~~~~~--g~~~-~---~~~~~~~l~l~v~dvd~~~   78 (117)
                      +|.++.+|++++.+||.++||+          .+.+-|..+.. ....+.  +... .   .+...+-+.+.+||--+..
T Consensus         7 HLA~pV~Dl~~tr~FYgevlG~~~GRstd~wvdfDfyGHQ~v~Hl~~q~~~~~~g~V~~~~v~~pHfGvVl~~edW~ala   86 (138)
T COG3565           7 HLAIPVNDLDETRRFYGEVLGCKEGRSTDTWVDFDFYGHQVVAHLTPQPDSQGSGKVDGHGVPPPHFGVVLPVEDWFALA   86 (138)
T ss_pred             EEeeeccccHHHHhhhhhhcccccccccceEEEeeecccEEEEEecCCcccccCcccCCCCCCCccceEEEEHHHHHHHH
Confidence            3444444999999999999992          22222433322 211110  1100 0   0115667788889888999


Q ss_pred             HHHHhCCCee------------e-ceEEEEECCCCCeEEEecc
Q 044588           79 AKAMSGGVWA------------T-GRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        79 ~~~~~~G~~v------------g-~r~~~v~DP~G~~w~l~~~  108 (117)
                      +|+.++|...            | +|..++.||.||.+++..-
T Consensus        87 erlea~gi~~~i~P~vRF~Ge~gEq~TlFl~DP~gN~lEfK~f  129 (138)
T COG3565          87 ERLEAAGIPFHIPPKVRFKGEPGEQRTLFLFDPSGNALEFKGF  129 (138)
T ss_pred             HHHHHcCCCcccCceEEecCCccceEEEEEECCCCCeeeeecc
Confidence            9999999644            2 6888999999999998654

>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS)

Probab=98.06  E-value=6.2e-05  Score=53.06  Aligned_cols=27  Identities=33%  Similarity=0.410  Sum_probs=24.2

Q ss_pred             Ccce-EEEEEeCCHHHHHHHHHhCCCee
Q 044588           62 GIGC-VLCLEIDDVEAALAKAMSGGVWA   88 (117)
Q Consensus        62 ~~~~-~l~l~v~dvd~~~~~~~~~G~~v   88 (117)
                      +.|+ +|+|.|+|++++++++.++|+++
T Consensus        81 G~Gv~HIAf~vdDI~~~~~~L~~~Gv~~  108 (191)
T cd07250          81 GAGVQHIALATDDIFATVAALRARGVEF  108 (191)
T ss_pred             CCceeEEEEECCCHHHHHHHHHHcCCee
Confidence            3555 89999999999999999999988

HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,

>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]

Probab=98.02  E-value=3.3e-05  Score=48.61  Aligned_cols=92  Identities=24%  Similarity=0.166  Sum_probs=55.1

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEcC--------eEEEEecCC-----C----CC-----------ccc-cCCC--
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIAG--------STFLVSNFS-----N----DS-----------AAA-KNMG--   62 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~~--------~~l~~~~~~-----~----~g-----------~~~-~~~~--   62 (117)
                      ...|.|+  |+++|++||+++||.++....        ....+....     .    .+           ... ....  
T Consensus         5 hv~l~v~--dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (138)
T COG0346           5 HVTLAVP--DLEASIDFYTDVLGLRLVKDTVNEADDGGGYHLLFLDGDGGPGELLAFFGFEGRAGTGFVGDVALGVPGGD   82 (138)
T ss_pred             EEEEeeC--CHhHhHHHHHhhcCCeeeeecccccCCceEEEEEeccCCCCcccceeecccccccccccccceEEeecCch
Confidence            4567787  999999999999995553221        011111110     0    00           000 0011  


Q ss_pred             -cceEEEEEeCC---HHHHHHHHHhCCCee--ec-e----EEEEECCCCCeEEEec
Q 044588           63 -IGCVLCLEIDD---VEAALAKAMSGGVWA--TG-R----VGKVKDPCGFTWLIYS  107 (117)
Q Consensus        63 -~~~~l~l~v~d---vd~~~~~~~~~G~~v--g~-r----~~~v~DP~G~~w~l~~  107 (117)
                       ....+.+.+++   ....+..+...|..+  .. .    .++++||+|+.|+|.+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~dp~g~~~e~~~  138 (138)
T COG0346          83 LGLGHLAFEVDDEAFGDAALAFLDPDGVRIELGEPGRGGVHVYFRDPDGILIELAT  138 (138)
T ss_pred             hccCceeEecccccccceEEEeeCCCCCEEEeecCCCcceEEEEECCCCcEEEeeC
Confidence             14567777776   566666666667665  21 1    6899999999999864

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=97.97  E-value=0.00039  Score=53.22  Aligned_cols=73  Identities=21%  Similarity=0.253  Sum_probs=47.8

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEE---------------EcCeEEEEecCCCCCccc----cCCCcc-eEEEEEeCC
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLE---------------IAGSTFLVSNFSNDSAAA----KNMGIG-CVLCLEIDD   73 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~---------------~~~~~l~~~~~~~~g~~~----~~~~~~-~~l~l~v~d   73 (117)
                      .+.+.|+  |++++++||.+.||.+..               .++..+.+........+.    ...+.+ .+++|.|+|
T Consensus         5 hi~~~V~--D~~~a~~~y~~~LGf~~~~~~~~~~~~~~~~~~~G~~~l~L~~~~~~~s~~~~~~~~hg~gv~~iaf~V~D   82 (353)
T TIGR01263         5 FVEFYVG--DAKQAAYYYFTRFGFEKVAKETGHREKASHVLRQGQINFVLTAPYSSDSPAADFAAKHGDGVKDVAFRVDD   82 (353)
T ss_pred             EEEEEeC--CHHHHHHHHHHhcCCcEEEEeecCCceeEEEEEeCCEEEEEecCCCCCchHHHHHHhCCCceEEEEEEECC
Confidence            4567777  999999999999993221               122234443321111000    012233 579999999


Q ss_pred             HHHHHHHHHhCCCee
Q 044588           74 VEAALAKAMSGGVWA   88 (117)
Q Consensus        74 vd~~~~~~~~~G~~v   88 (117)
                      ++++++++.++|+++
T Consensus        83 v~~a~~~l~~~Ga~~   97 (353)
T TIGR01263        83 AAAAFEAAVERGAEP   97 (353)
T ss_pred             HHHHHHHHHHCCCEe
Confidence            999999999999987

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=97.88  E-value=0.00014  Score=53.14  Aligned_cols=48  Identities=21%  Similarity=0.237  Sum_probs=37.1

Q ss_pred             cce-EEEEEeCCHHHHHHHHHhCCCee-eceEEEEECCCCCeEEEecccC
Q 044588           63 IGC-VLCLEIDDVEAALAKAMSGGVWA-TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        63 ~~~-~l~l~v~dvd~~~~~~~~~G~~v-g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +++ .+.|..+|+-...+++...|++. |...+.++||+|+.+.|....+
T Consensus        96 ndfg~i~I~s~dv~~~ve~v~~p~~~~~g~~~~~v~dPdGykF~l~~~~p  145 (299)
T KOG2943|consen   96 NDFGGITIASDDVFSKVEKVNAPGGKGSGCGIAFVKDPDGYKFYLIDRGP  145 (299)
T ss_pred             CCcccEEEeHHHHHHHHHHhcCcCCcccceEEEEEECCCCcEEEEeccCC
Confidence            443 67788888888888777766665 5668899999999999997443

>KOG2943 consensus Predicted glyoxalase [Carbohydrate transport and metabolism]

Probab=97.81  E-value=0.0002  Score=52.38  Aligned_cols=93  Identities=12%  Similarity=0.084  Sum_probs=57.7

Q ss_pred             eeEEEEecCCCHHHHHHHHHhhhCeEE------------EEcCeE--EEEecCCCCCccccCCCcceEEEEEeCCHHHHH
Q 044588           13 MKPQLLVEESKATNVVQFYKTTSGAQL------------EIAGST--FLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAAL   78 (117)
Q Consensus        13 ~~p~L~v~~~D~~~a~~FY~~~fG~~l------------~~~~~~--l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~   78 (117)
                      +...|.|.  |+++|+.||.++||..+            ..+...  |-+..... ......+-..+.+.+-.+++...-
T Consensus       151 ~~V~l~Vg--dL~ks~kyw~~~lgM~ilekeek~t~~~mgYgd~q~~LElt~~~~-~id~~kg~griafaip~d~~~~l~  227 (299)
T KOG2943|consen  151 LQVMLNVG--DLQKSIKYWEKLLGMKILEKEEKYTRARMGYGDEQCVLELTYNYD-VIDRAKGFGRIAFAIPTDDLPKLQ  227 (299)
T ss_pred             EEEEEEeh--hHHHHHHHHHHHhCcchhhhhhhhhhhhhccCCcceEEEEEeccC-cccccccceeEEEeccccccccHH
Confidence            45567888  99999999999999433            222211  22211110 111111113466777667777666


Q ss_pred             HHHHhCCCee-------------eceEEEEECCCCCeEEEecc
Q 044588           79 AKAMSGGVWA-------------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        79 ~~~~~~G~~v-------------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +.++.+++++             +.....+.|||||-+++...
T Consensus       228 e~iK~~n~~i~~~lttl~tPgka~vqvvil~DPDgheicfVdd  270 (299)
T KOG2943|consen  228 EAIKSANGTILTPLTTLDTPGKATVQVVILADPDGHEICFVDD  270 (299)
T ss_pred             HHHHHhccccccceeeccCCCcceeEEEEEECCCCceEEEecc
Confidence            6666666655             24577999999999999764

>TIGR01263 4HPPD 4-hydroxyphenylpyruvate dioxygenase

Probab=97.77  E-value=0.00022  Score=54.59  Aligned_cols=94  Identities=18%  Similarity=0.258  Sum_probs=58.4

Q ss_pred             EEEecCC--CHHHHHHHHHhhhCeEE----EEcC----------------eEEEEecCCC-CCcc------ccCCCcce-
Q 044588           16 QLLVEES--KATNVVQFYKTTSGAQL----EIAG----------------STFLVSNFSN-DSAA------AKNMGIGC-   65 (117)
Q Consensus        16 ~L~v~~~--D~~~a~~FY~~~fG~~l----~~~~----------------~~l~~~~~~~-~g~~------~~~~~~~~-   65 (117)
                      ++.+.+.  |++++++||+++||.+.    .+.+                ..|-+..... ....      ....+.|+ 
T Consensus       161 Hv~i~V~~~dl~~~~~fY~~~lGf~~~~~~~~~~~~~~~~s~~~~~~~g~~~i~L~ep~~~~~~s~i~~fl~~~~g~Gv~  240 (353)
T TIGR01263       161 HLVGNVYRGQMEPWAEFYEKIFGFREIRSFDIKTEYSALNSIVMASPDGKVKIPLNEPASGKDKSQIEEFLEFYNGAGVQ  240 (353)
T ss_pred             eeEcccCCccHHHHHHHHHHHhCCceeeEEEeccCCccEEEEEEECCCCcEEEEEeccCCCCCCCHHHHHHHHcCCCCcc
Confidence            4555554  89999999999999322    1211                1121211100 0000      01123555 


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCee-----------eceEE--------------EE--ECCCCCeEEEeccc
Q 044588           66 VLCLEIDDVEAALAKAMSGGVWA-----------TGRVG--------------KV--KDPCGFTWLIYSPV  109 (117)
Q Consensus        66 ~l~l~v~dvd~~~~~~~~~G~~v-----------g~r~~--------------~v--~DP~G~~w~l~~~~  109 (117)
                      +|+|.|+|++++++++.++|+++           ..|+.              .+  +|.+|..++|++..
T Consensus       241 HiAf~vdDi~~~~~~l~~~Gv~~l~~P~~yY~~l~~r~~~~~~~~~~~l~~~~iL~D~d~~g~llqift~~  311 (353)
T TIGR01263       241 HIALNTDDIVRTVRALRARGVEFLDTPDTYYDLLGERLGGHVKEDLDTLRELNILIDGDEDGYLLQIFTKP  311 (353)
T ss_pred             EEEEEcCCHHHHHHHHHHcCCccCcCCHHHHHHHHHHhcccccchHHHHHHCCEEEecCCCceEEEEeccC
Confidence            79999999999999999999987           23432              22  56778899998764

This protein oxidizes 4-hydroxyphenylpyruvate, a tyrosine and phenylalanine catabolite, to homogentisate. Homogentisate can undergo a further non-enzymatic oxidation and polymerization into brown pigments that protect some bacterial species from light. A similar process occurs spontaneously in blood and is hemolytic (see PubMed:8000039). In some bacterial species, this enzyme has been studied as a hemolysin.

>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D

Probab=97.54  E-value=0.0065  Score=40.05  Aligned_cols=94  Identities=14%  Similarity=0.180  Sum_probs=52.2

Q ss_pred             eeEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCCCC------Cccc----cC--CCcceEEEEEeCCHHHHHH
Q 044588           13 MKPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFSND------SAAA----KN--MGIGCVLCLEIDDVEAALA   79 (117)
Q Consensus        13 ~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~~~------g~~~----~~--~~~~~~l~l~v~dvd~~~~   79 (117)
                      ++|.|.|+  |-+.-++||++.||..+... +....+++....      .+|.    ..  +..--.+.+.+++..+. +
T Consensus         2 ~~PvlRVn--nR~~ni~FY~~~LGfkll~EEna~a~lg~~~~~erlvlEESP~~rtr~V~G~KKl~~ivIkv~~~~EI-e   78 (125)
T PF14506_consen    2 IIPVLRVN--NRDLNIDFYQKTLGFKLLSEENALAILGDQQKEERLVLEESPSMRTRAVEGPKKLNRIVIKVPNPKEI-E   78 (125)
T ss_dssp             EEEEEEES--SHHHHHHHHTTTT--EEEEEETTEEEEE-TT--EEEEEEE--TTT-B--SSS-SEEEEEEEESSHHHH-H
T ss_pred             cCceEEEc--CHHHhHHHHHhccCcEEeeccccEEEecCCCCceEEEEecCCccccccccCcceeeEEEEEcCCHHHH-H
Confidence            57999999  99999999999999665544 333333332110      1111    00  11234778888887776 4


Q ss_pred             HHHhCCCee-----e--ceEEEEECCCCCeEEEeccc
Q 044588           80 KAMSGGVWA-----T--GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        80 ~~~~~G~~v-----g--~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .+++.|..+     |  +.-+-+.+|+|..|.|....
T Consensus        79 ~LLar~~~~~~l~kg~~gyAfe~vSPEgd~~llhaEd  115 (125)
T PF14506_consen   79 ALLARGAQYDRLYKGKNGYAFEAVSPEGDRFLLHAED  115 (125)
T ss_dssp             HHHHC-S--SEEEE-SSSEEEEEE-TT--EEEEE--S
T ss_pred             HHHhcccccceeEEcCCceEEEEECCCCCEEEEEEcC
Confidence            467778766     3  34457889999999998653

>PF15067 FAM124: FAM124 family

Probab=96.50  E-value=0.034  Score=40.58  Aligned_cols=88  Identities=11%  Similarity=0.099  Sum_probs=55.5

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeE--EEEcCe-----------EEEEecCC-CCCccccCCCcceEEEEEeCCHHHHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQ--LEIAGS-----------TFLVSNFS-NDSAAAKNMGIGCVLCLEIDDVEAALA   79 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~--l~~~~~-----------~l~~~~~~-~~g~~~~~~~~~~~l~l~v~dvd~~~~   79 (117)
                      +-|...+  |.+.+++||+-+++.+  .+-.+.           .|-++-.. +.|..+. +-....|.|.|.|+-+..-
T Consensus       133 tly~~~~--N~~d~vr~Yelil~~~~~~~k~~FC~F~lys~~~~~iQlsLK~lp~~~~p~-p~esavLqF~V~~igqLvp  209 (236)
T PF15067_consen  133 TLYCSFD--NYEDMVRFYELILQREPTQQKEDFCFFTLYSQPGLDIQLSLKQLPPGMSPE-PTESAVLQFRVEDIGQLVP  209 (236)
T ss_pred             EEEecCC--CHHHHHHHHHHHhccCcceeeCCcEEEEEecCCCeEEEEEeccCCCCCCcc-cccceEEEEEecchhhhcc
Confidence            4444445  9999999999999922  222222           33332211 1122222 2267899999999998877


Q ss_pred             HHHhCCCee-eceEEEEECCCCCeEEE
Q 044588           80 KAMSGGVWA-TGRVGKVKDPCGFTWLI  105 (117)
Q Consensus        80 ~~~~~G~~v-g~r~~~v~DP~G~~w~l  105 (117)
                       ++-..+.. +...-...|||||.+-|
T Consensus       210 -LLPnpc~PIS~~rWqT~D~DGNkILL  235 (236)
T PF15067_consen  210 -LLPNPCSPISETRWQTEDYDGNKILL  235 (236)
T ss_pred             -cCCCCcccccCCcceeeCCCCCEecc
Confidence             45555544 55557899999998754

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=96.38  E-value=0.019  Score=43.84  Aligned_cols=70  Identities=19%  Similarity=0.305  Sum_probs=44.6

Q ss_pred             EEecCCCHHHHHHHHHhhhCeEE----------------EE-cCeEEEEe-cC-CC----CCccccCCCcce-EEEEEeC
Q 044588           17 LLVEESKATNVVQFYKTTSGAQL----------------EI-AGSTFLVS-NF-SN----DSAAAKNMGIGC-VLCLEID   72 (117)
Q Consensus        17 L~v~~~D~~~a~~FY~~~fG~~l----------------~~-~~~~l~~~-~~-~~----~g~~~~~~~~~~-~l~l~v~   72 (117)
                      +.|.  |...+.+||...||.+-                .+ .|..+.+. .. .+    +|.-....|.++ .++|+|+
T Consensus        23 F~vg--na~q~A~~y~~~fGfep~A~~~letg~~~~~s~alr~g~~vFv~~s~~~p~~~~~G~~l~~HgdgvkdvafeVe  100 (381)
T KOG0638|consen   23 FWVG--NAKQAARWYCSGFGFEPLAYRGLETGSREWASHALRQGKIVFVFNSAYNPDNSEYGDHLVKHGDGVKDVAFEVE  100 (381)
T ss_pred             EEec--CcHHHHHHHHhhcCCcchhcccccccchHHHHHHhhcCCEEEEEecCCCCCchhhhhhhhhcccchhceEEEec
Confidence            4455  99999999999999221                11 12222222 21 11    121111223444 7899999


Q ss_pred             CHHHHHHHHHhCCCee
Q 044588           73 DVEAALAKAMSGGVWA   88 (117)
Q Consensus        73 dvd~~~~~~~~~G~~v   88 (117)
                      |.+++++.+.++|+.+
T Consensus       101 D~da~~~~~va~Ga~v  116 (381)
T KOG0638|consen  101 DADAIFQEAVANGAKV  116 (381)
T ss_pred             chHHHHHHHHHcCCcc
Confidence            9999999999999988

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=95.75  E-value=0.07  Score=41.94  Aligned_cols=48  Identities=27%  Similarity=0.344  Sum_probs=36.0

Q ss_pred             Ccce-EEEEEeCCHHHHHHHHHhC----CCee------------ece---------------EEEEECCC--CCeEEEec
Q 044588           62 GIGC-VLCLEIDDVEAALAKAMSG----GVWA------------TGR---------------VGKVKDPC--GFTWLIYS  107 (117)
Q Consensus        62 ~~~~-~l~l~v~dvd~~~~~~~~~----G~~v------------g~r---------------~~~v~DP~--G~~w~l~~  107 (117)
                      |.|+ +|.|.++|+.++.+++.++    |.+.            ..|               ...+.|.+  |.+++|++
T Consensus       260 G~GIQHIAl~tdDI~~av~~Lra~~~~~Gv~fL~~Pp~~YYd~L~~R~~~~l~~e~~~~L~~~~ILvD~d~~G~LLQIFT  339 (398)
T PLN02875        260 GPGLQHLALKSDDIFGTLREMRARSHIGGFEFMPPPPPTYYKNLKKRVGDVLTEEQIKECEELGILVDKDDQGVLLQIFT  339 (398)
T ss_pred             CCCeeEEEeecCCHHHHHHHHHhccccCCeecCCCChHHHHHHHHHHhccCCChhhHHHHHHcCEEEecCCCceEEEEec
Confidence            4665 8999999999999999998    8766            122               22555555  88899887


Q ss_pred             cc
Q 044588          108 PV  109 (117)
Q Consensus       108 ~~  109 (117)
                      ..
T Consensus       340 kp  341 (398)
T PLN02875        340 KP  341 (398)
T ss_pred             cc
Confidence            64

>PLN02875 4-hydroxyphenylpyruvate dioxygenase

Probab=95.41  E-value=0.69  Score=36.45  Aligned_cols=46  Identities=13%  Similarity=0.134  Sum_probs=34.0

Q ss_pred             cc-eEEEEEeCCHHHHHHHHHhCCCee-------e-------ceEEEEECCCCCeEEEecc
Q 044588           63 IG-CVLCLEIDDVEAALAKAMSGGVWA-------T-------GRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        63 ~~-~~l~l~v~dvd~~~~~~~~~G~~v-------g-------~r~~~v~DP~G~~w~l~~~  108 (117)
                      .+ ..+.|.|+|+++++++++++|++.       +       -++..++=+.|....|.+.
T Consensus        91 ~gV~dvaf~V~Da~~a~~~A~~~Ga~~~~~~~~~~d~~~~g~~~~~~I~~~G~~~h~lVdr  151 (398)
T PLN02875         91 LAVRAVGVLVEDAEEAFRTSVAHGARPVLEPTELGDEASGGKAVIAEVELYGDVVLRYVSY  151 (398)
T ss_pred             CeeeEEEEEECCHHHHHHHHHHCCCeeccCCccccccccCceEEEEEEEccCCcEEEEEcc
Confidence            44 478999999999999999999987       1       1344566666666666653

>PF14507 CppA_C: CppA C-terminal; PDB: 3E0R_D

Probab=95.12  E-value=0.05  Score=34.83  Aligned_cols=84  Identities=14%  Similarity=0.156  Sum_probs=34.7

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEcCeEEEEecCCCCCccc-cCCCcce---EEEEEeC---CHHHHHHHHHhCCC
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSNDSAAA-KNMGIGC---VLCLEID---DVEAALAKAMSGGV   86 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~~~~l~~~~~~~~g~~~-~~~~~~~---~l~l~v~---dvd~~~~~~~~~G~   86 (117)
                      .-.|.|.  | +++.+||+++||..+.   ..+.+....  |..- ..+...|   .|-+.|+   |+.+.-+++.+.+.
T Consensus         8 ~i~LNV~--d-~~~~~fy~~~f~~~~~---~~l~f~ea~--G~DL~~~~~~twDLe~Lkf~V~~~~Dl~~L~~~le~~~~   79 (101)
T PF14507_consen    8 SIELNVP--D-AKSQSFYQSIFGGQLP---FFLTFQEAQ--GPDLTIENNETWDLEMLKFQVPKDFDLAALKSHLEEQEF   79 (101)
T ss_dssp             EEEEEE---T--T---S--H---HHHT---TTEEEEE-----CCGSS-TTSBSSEEEEEEEES-S--HHHHHHHTTTS-E
T ss_pred             EEEEeCC--C-hhHHHHHHhccccCCC---ceEEEeecc--CCccccCCCcEEeeEEEEEEecCcccHHHHHHHhcccce
Confidence            4567788  9 8899999999972111   112222111  1111 1111233   5566777   55566665544222


Q ss_pred             ee--eceEEEEECCCCCeEEE
Q 044588           87 WA--TGRVGKVKDPCGFTWLI  105 (117)
Q Consensus        87 ~v--g~r~~~v~DP~G~~w~l  105 (117)
                      =+  ..++..+.||.|+-|.+
T Consensus        80 fidKk~k~l~~~Dps~IElWF  100 (101)
T PF14507_consen   80 FIDKKEKFLVTSDPSQIELWF  100 (101)
T ss_dssp             E--TT-SEEEEE-TTS-EEEE
T ss_pred             EecCCceEEEEECCcceEEEe
Confidence            22  57899999999998865

>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A

Probab=94.55  E-value=0.36  Score=32.59  Aligned_cols=89  Identities=22%  Similarity=0.324  Sum_probs=50.4

Q ss_pred             EEecCCCHHHHHHHHHhhhC-----------eEE-EEcCeEEEEecCCCCCccc---cCCCcc-eEEEEEeCCHHHHHHH
Q 044588           17 LLVEESKATNVVQFYKTTSG-----------AQL-EIAGSTFLVSNFSNDSAAA---KNMGIG-CVLCLEIDDVEAALAK   80 (117)
Q Consensus        17 L~v~~~D~~~a~~FY~~~fG-----------~~l-~~~~~~l~~~~~~~~g~~~---~~~~~~-~~l~l~v~dvd~~~~~   80 (117)
                      +.++  +.+++..++ +.||           ..+ +-++-.+.+... +.+...   ...|.+ ..+.|.|+|+++++++
T Consensus        15 Fa~~--~~~~l~~~~-~~lGF~~~a~hrsk~v~l~rQG~I~~vln~e-p~s~a~~~~~~HG~sv~aiafrV~Da~~A~~r   90 (139)
T PF14696_consen   15 FAVP--DAQALAQLF-TALGFQPVARHRSKDVTLYRQGDINFVLNSE-PDSFAAEFAAQHGPSVCAIAFRVDDAAAAYER   90 (139)
T ss_dssp             EE-S--STTSCHHHH-CCCCEEEECCECCCSEEEEEETTEEEEEEEE-STSCHHHHHHHHSSEEEEEEEEES-HHHHHHH
T ss_pred             EecC--CHHHHHHHH-HHhCcceEEecCCcceEEEEeCCEEEEEeCC-CcchHHHHHHhcCCEEEEEEEEeCCHHHHHHH
Confidence            3445  866666666 5689           222 223444555432 322210   111344 4789999999999999


Q ss_pred             HHhCCCee-------e-ceEEEEECCCCCeEEEeccc
Q 044588           81 AMSGGVWA-------T-GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        81 ~~~~G~~v-------g-~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +++.|++.       | .....++=+.|.++.|++..
T Consensus        91 A~~~GA~~~~~~~~~~e~~~paI~g~G~sl~yfVdr~  127 (139)
T PF14696_consen   91 AVALGAEPVQEPTGPGELNIPAIRGIGGSLHYFVDRY  127 (139)
T ss_dssp             HHHTT--EEEEEEETT-BEEEEEE-CCC-EEEEEE--
T ss_pred             HHHcCCcCcccCCCCCcEeeeeEEccCCCEEEEEecC
Confidence            99999987       1 34667888888888887764

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=93.82  E-value=0.44  Score=36.84  Aligned_cols=27  Identities=30%  Similarity=0.352  Sum_probs=23.9

Q ss_pred             Ccce-EEEEEeCCHHHHHHHHHhCCCee
Q 044588           62 GIGC-VLCLEIDDVEAALAKAMSGGVWA   88 (117)
Q Consensus        62 ~~~~-~l~l~v~dvd~~~~~~~~~G~~v   88 (117)
                      |.|+ +|.|.++|+-++.+++.++|...
T Consensus       243 G~GIQHIA~~T~dI~~tv~~lr~rG~~f  270 (363)
T COG3185         243 GEGIQHIAFGTDDIYATVAALRERGVKF  270 (363)
T ss_pred             CCcceEEEecccHHHHHHHHHHHcCCcc
Confidence            4554 89999999999999999999877

>COG2514 Predicted ring-cleavage extradiol dioxygenase [General function prediction only]

Probab=92.97  E-value=0.74  Score=34.32  Aligned_cols=30  Identities=13%  Similarity=0.267  Sum_probs=21.0

Q ss_pred             ceeEEEEecCCCHHHHHHHHHhhhCeEEEE
Q 044588           12 GMKPQLLVEESKATNVVQFYKTTSGAQLEI   41 (117)
Q Consensus        12 ~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~   41 (117)
                      +++-+|.+.+.|+++|.+||+++||.+...
T Consensus       167 t~IGHvHL~v~~l~eA~~fY~~~LG~~~~~  196 (265)
T COG2514         167 TIIGHVHLKVADLEEAEQFYEDVLGLEVTA  196 (265)
T ss_pred             cEEeEEEEEeCCHHHHHHHHHHhcCCeeee
Confidence            344444443349999999999999955543

>PF13468 Glyoxalase_3: Glyoxalase-like domain; PDB: 3P8A_B

Probab=90.57  E-value=0.53  Score=32.25  Aligned_cols=70  Identities=17%  Similarity=0.198  Sum_probs=32.0

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEE----------------EEcCeEEEEecCCC--CC--cccc------CCCcc-eEEE
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQL----------------EIAGSTFLVSNFSN--DS--AAAK------NMGIG-CVLC   68 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l----------------~~~~~~l~~~~~~~--~g--~~~~------~~~~~-~~l~   68 (117)
                      .+.|+  |++++.++|++.||..+                .++++-|-+....+  ..  ....      ..+.+ ..++
T Consensus         5 v~~v~--dl~~a~~~~~~~lGf~~~~gg~h~~~GT~N~li~f~~~YlEli~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~   82 (175)
T PF13468_consen    5 VIAVR--DLDAAVERFEQRLGFTVTPGGEHPGWGTANALIPFGDGYLELIAIDPEAPAPDRGRWFGLDRLAGGEGLYGWA   82 (175)
T ss_dssp             EEE-T--TGGG----GGGS--S--EEEEE-TTT-EEEEEEE-SSSEEEEEEES-HHHSTGGGT-TTTHHHHT--EEEEEE
T ss_pred             EEEcC--CHHHHHHhhhhcceEeecCCCcCCCCccEEEEEeeCCceEEEEEeCCcccccccccceechhhcCCCCeEEEE
Confidence            34556  99999999988899332                22322222221111  00  0000      12344 4889


Q ss_pred             EEeCCHHHHHHHHHhCCCe
Q 044588           69 LEIDDVEAALAKAMSGGVW   87 (117)
Q Consensus        69 l~v~dvd~~~~~~~~~G~~   87 (117)
                      +.++|+++..+++.+.|..
T Consensus        83 l~t~d~~~~~~~l~~~G~~  101 (175)
T PF13468_consen   83 LRTDDIEAVAARLRAAGLD  101 (175)
T ss_dssp             EE-S-HHHHHHHHHTTT-E
T ss_pred             EecCCHHHHHHHHHhcCCC
Confidence            9999999999999999953

>COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins [Amino acid transport and metabolism / General function prediction only]

Probab=90.46  E-value=5  Score=31.22  Aligned_cols=38  Identities=32%  Similarity=0.527  Sum_probs=31.1

Q ss_pred             cceEEEEEeCCHHHHHHHHHhCCCee------------------eceEEEEECCCC
Q 044588           63 IGCVLCLEIDDVEAALAKAMSGGVWA------------------TGRVGKVKDPCG  100 (117)
Q Consensus        63 ~~~~l~l~v~dvd~~~~~~~~~G~~v------------------g~r~~~v~DP~G  100 (117)
                      .-..+.+.|+|..++++++++.|++.                  |+...++.|++|
T Consensus        87 s~~a~a~~V~DA~~A~a~A~a~gA~~~~~~~g~~e~~ipai~giggsllyfvd~~~  142 (363)
T COG3185          87 SACAMAFRVDDAEQALARALALGARTIDTEIGAGEVDIPAIRGIGGSLLYFVDRYG  142 (363)
T ss_pred             chheeEEeeCCHHHHHHHHHHcCCccccCCCCCccccccceeccCCcEEEEeccCC
Confidence            44578899999999999999999944                  456678888883

>PF13669 Glyoxalase_4: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; PDB: 3RMU_B 3ISQ_A 1JC5_D 1JC4_D 3HDP_A 2QH0_A 3GM5_A 3OA4_A 3CT8_A

Probab=90.17  E-value=1  Score=28.21  Aligned_cols=47  Identities=19%  Similarity=0.077  Sum_probs=36.5

Q ss_pred             EEEEEeCCHHHHHHHHHh-CCCee---------eceEEEEECCCC-CeEEEecccCCC
Q 044588           66 VLCLEIDDVEAALAKAMS-GGVWA---------TGRVGKVKDPCG-FTWLIYSPVKKC  112 (117)
Q Consensus        66 ~l~l~v~dvd~~~~~~~~-~G~~v---------g~r~~~v~DP~G-~~w~l~~~~~~~  112 (117)
                      ++.|.|+|++++.+.+.+ .|.+.         +.+..++.-+.| ..++|.++....
T Consensus         2 Hv~i~V~Dl~~a~~~~~~~lG~~~~~~~~~~~~~v~~~~~~~~~~~~~iELi~p~~~~   59 (109)
T PF13669_consen    2 HVGIVVPDLDAAAAFYCDVLGFEPWERYRDEPQGVRVAFLYLGDGPVQIELIQPLDGD   59 (109)
T ss_dssp             EEEEEES-HHHHHHHHHHCTTHEEEEEEEEGCTTEEEEEEEETTETEEEEEEEESSTT
T ss_pred             EEEEEcCCHHHHHHHHHHhhCCcEEEEEecCCCCEEEEEEEeCCCcEEEEEEEeCCCC
Confidence            678999999999888887 78655         345678888888 689999987654

>PF07494 Reg_prop: Two component regulator propeller; InterPro: IPR011110 A large group of two component regulator proteins appear to have the same N-terminal structure of 14 tandem repeats

Probab=83.91  E-value=1.3  Score=20.54  Aligned_cols=14  Identities=21%  Similarity=0.382  Sum_probs=10.9

Q ss_pred             eEEEEECCCCCeEE
Q 044588           91 RVGKVKDPCGFTWL  104 (117)
Q Consensus        91 r~~~v~DP~G~~w~  104 (117)
                      -+..++|++|++|-
T Consensus         7 I~~i~~D~~G~lWi   20 (24)
T PF07494_consen    7 IYSIYEDSDGNLWI   20 (24)
T ss_dssp             EEEEEE-TTSCEEE
T ss_pred             EEEEEEcCCcCEEE
Confidence            36789999999995

These repeats show homology to members of IPR002372 from INTERPRO and IPR001680 from INTERPRO indicating that they are likely to form a beta-propeller. This family has been built with artificially high cut-offs in order to avoid overlaps with other beta-propeller families. The fourteen repeats are likely to form two propellers; it is not clear if these structures are likely to recruit other proteins or interact with DNA.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.

>KOG0638 consensus 4-hydroxyphenylpyruvate dioxygenase [Amino acid transport and metabolism]

Probab=80.32  E-value=6.2  Score=30.48  Aligned_cols=28  Identities=21%  Similarity=0.236  Sum_probs=24.3

Q ss_pred             CCcce-EEEEEeCCHHHHHHHHHhCCCee
Q 044588           61 MGIGC-VLCLEIDDVEAALAKAMSGGVWA   88 (117)
Q Consensus        61 ~~~~~-~l~l~v~dvd~~~~~~~~~G~~v   88 (117)
                      .|.|+ ++.+.++|+-++.+.+.++|++.
T Consensus       259 gG~GvQHiaL~tedIi~Ai~~lr~rG~eF  287 (381)
T KOG0638|consen  259 GGAGVQHIALNTEDIIEAIRGLRARGGEF  287 (381)
T ss_pred             CCCceeeeeecchHHHHHHHHHHhcCCcc
Confidence            35665 89999999999999999999987

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	117
1xy7_A	166	X-Ray Structure Of Gene Product From Arabidopsis Th		1e-07

>pdb|1XY7|A Chain A, X-Ray Structure Of Gene Product From Arabidopsis Thaliana At5g48480 Length = 166

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 55/130 (42%), Gaps = 34/130 (26%)
Query: 10  FMGMKPQLLVEESKATNVVQFYKTTSGA-----------------------QLEIAGSTF 46
           F   K  LLVE  K  + V FYK+  GA                       +L +AGS+F
Sbjct: 23  FTEFKQXLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSF 82
Query: 47  LVSNFSN--DSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWAT---------GRVGKV 95
           +V + S+    + AK+ G G    L   D EAA+AKA+  G             G  GKV
Sbjct: 83  VVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKV 142
Query: 96  KDPCGFTWLI 105
            DP G TW+ 
Sbjct: 143 TDPFGVTWIF 152

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	117
1xy7_A	166	Unknown protein; structural genomics, protein stru	5e-12
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	1e-06
2i7r_A	118	Conserved domain protein; structural genomics cons	2e-06
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	2e-05
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	5e-05
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	7e-05
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	9e-05
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	2e-04
3l20_A	172	Putative uncharacterized protein; hypothetical pro	2e-04
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	6e-04

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A Length = 166

 Score = 58.1 bits (140), Expect = 5e-12
 Identities = 43/149 (28%), Positives = 57/149 (38%), Gaps = 34/149 (22%)

Query: 2   AAPATLANFMGMKPQLLVEESKATNVVQFYKTTSG-----------------------AQ 38
               T   F   K  LLVE  K  + V FYK+  G                       ++
Sbjct: 15  GPVETHLVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSE 74

Query: 39  LEIAGSTFLVSNFSND--SAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWAT------- 89
           L +AGS+F+V + S+    + AK+ G G    L   D EAA+AKA+  G           
Sbjct: 75  LNLAGSSFVVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEV 134

Query: 90  --GRVGKVKDPCGFTWLIYSPVKKCADVE 116
             G  GKV DP G TW+         D  
Sbjct: 135 ELGFKGKVTDPFGVTWIFAEKKTVITDEN 163

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP} Length = 137

 Score = 43.6 bits (103), Expect = 1e-06
 Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 12/85 (14%)

Query: 37  AQLEIAGSTFLVSNFSNDSAAAKNMGIGCV-LCLEIDDVEAALAKAMSGGV--------- 86
           A L+  G   +V         +   G  C  + + + DV+    ++ + G          
Sbjct: 41  ADLDTGGGIVMVRRTGEPYTVSCAGGHTCKQVIVWVSDVDEHFMRSTAAGADIVQPLQDK 100

Query: 87  -WATGRVGKVKDPCGFTWLIYSPVK 110
            W   R   V+D  G  W     ++
Sbjct: 101 PWG-LRQYLVRDLEGHLWEFTRHLR 124

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2 Length = 118

 Score = 42.5 bits (100), Expect = 2e-06
 Identities = 16/99 (16%), Positives = 29/99 (29%), Gaps = 23/99 (23%)

Query: 28  VQFYKTTSG----------AQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAA 77
               +              AQ  I     ++S   N     +N   G ++ +E++DV+  
Sbjct: 20  CADLEHILDKKADYANDGFAQFTIGSHCLMLS--QNHLVPLENFQSGIIIHIEVEDVDQN 77

Query: 78  LAKAMSGGV----------WATGRVGKVKDPCGFTWLIY 106
             +    G+          W       V+ P G     Y
Sbjct: 78  YKRLNELGIKVLHGPTVTDWG-TESLLVQGPAGLVLDFY 115

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7 Length = 149

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 14/87 (16%), Positives = 25/87 (28%), Gaps = 11/87 (12%)

Query: 37  AQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGG----------V 86
           A+L +     + S+           G    L ++       L  A++ G           
Sbjct: 56  ARLVVGSFALMASDNHPAYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTF 115

Query: 87  WATGRVGKVKDPCGFTWLIYSPVKKCA 113
           WA    G   D  G  W++     +  
Sbjct: 116 WA-ASFGMFTDRFGVAWMVNCEQDREG 141

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus} Length = 145

 Score = 39.2 bits (91), Expect = 5e-05
 Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 35/137 (25%)

Query: 7   LANFMGMKPQLLV---EESKA--TNVVQF------------YKTTSGAQLEIAGSTFLVS 49
           ++  + + P+L       S++   +V+ F            Y T  G  + + G      
Sbjct: 1   MSLTLRVVPELYCFDINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDVMLEGIAGKSR 60

Query: 50  NFSNDSAAAKNMGIGCVLCLEIDDVEAALAKA-----------------MSGGVWATGRV 92
            +         +G G     ++ D+E    +                    G   AT + 
Sbjct: 61  KW-LSGDLEFPLGSGVNFQWDVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQ 119

Query: 93  GKVKDPCGFTWLIYSPV 109
             V+ P G+ +     +
Sbjct: 120 FMVQTPDGYLFRFCQDI 136

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str} Length = 141

 Score = 38.7 bits (90), Expect = 7e-05
 Identities = 23/135 (17%), Positives = 36/135 (26%), Gaps = 35/135 (25%)

Query: 9   NFMGMK---PQLLV---EESKATNVVQFYKT----------------TSGAQLEIAGSTF 46
            F GM+   P   V     SK+     FY+                  +G  +    S  
Sbjct: 3   YFQGMRFVNPIPFVRDINRSKS-----FYRDRLGLKILEDFGSFVLFETGFAIHEGRSLE 57

Query: 47  LVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWATG--------RVGKVKDP 98
                ++  A         +L  E  DV+AA                     RV +  DP
Sbjct: 58  ETIWRTSSDAQEAYGRRNMLLYFEHADVDAAFQDIAPHVELIHPLERQAWGQRVFRFYDP 117

Query: 99  CGFTWLIYSPVKKCA 113
            G    +   + +  
Sbjct: 118 DGHAIEVGESLSQSG 132

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} Length = 134

 Score = 37.1 bits (86), Expect = 2e-04
 Identities = 17/127 (13%), Positives = 41/127 (32%), Gaps = 26/127 (20%)

Query: 6   TLANFMGMKPQLLVEESKATNVVQFYKTTSG----------AQLEIAGSTFLVSNFSNDS 55
           +L++   + P L + + +    +  +  T G          A LE++G    +       
Sbjct: 2   SLSDIHQITPFLHIPDMQEA--LTLFCDTLGFELKYRHSNYAYLELSGCGLRLLEEPARK 59

Query: 56  AAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWATG-------------RVGKVKDPCGFT 102
                +     +C+++ D+++   K                       R  +V+ P G  
Sbjct: 60  IIPDGIA-RVAICIDVSDIDSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDW 118

Query: 103 WLIYSPV 109
               +P+
Sbjct: 119 LNFTAPL 125

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus} Length = 172

 Score = 37.7 bits (87), Expect = 2e-04
 Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 15/85 (17%)

Query: 37  AQLEIAGSTFLVSNFSNDSAAAKN-----MGIGCVLCLEIDDVEAALAKAMSGGVWAT-- 89
           A+ E+ G   L S+    +    N     +        + D VEA   +           
Sbjct: 79  AEFEVLGVKVLCSDSFGRADKINNGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIEL 138

Query: 90  --------GRVGKVKDPCGFTWLIY 106
                   G++G   D  G  W+++
Sbjct: 139 PFADQFWGGKMGVFTDKYGVRWMLH 163

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} Length = 138

 Score = 36.2 bits (83), Expect = 6e-04
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 9/79 (11%)

Query: 36  GAQLEIAGSTFLVSNFSNDSAAAKNMGIG-CVLCLEIDDVEAALAKAMSGGVW------- 87
            A   + G  F+  +   +        +   V C   ++++    K    G         
Sbjct: 56  HATFTLNGQEFMCIDSYVNHNFTFTPAMSLYVTCETEEEIDTVFHKLAQDGAILMPLGSY 115

Query: 88  -ATGRVGKVKDPCGFTWLI 105
             + + G + D  G +W +
Sbjct: 116 PFSKKFGWLNDKYGVSWQL 134

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	117
3oms_A	138	PHNB protein; structural genomics, PSI-2, protein	99.86
3l20_A	172	Putative uncharacterized protein; hypothetical pro	99.84
1tsj_A	139	Conserved hypothetical protein; structural genomic	99.83
3fcd_A	134	Lyase, ORF125EGC139; lactoylglutathione lyase, YEC	99.83
1u7i_A	136	Hypothetical protein; structural genomics, PA1358,	99.81
1u69_A	163	Hypothetical protein; structural genomics, MSCG, p	99.81
3itw_A	137	Protein TIOX; bleomycin resistance fold, bisinterc	99.81
1u6l_A	149	Hypothetical protein; structural genomics, PSI, pr	99.79
1xy7_A	166	Unknown protein; structural genomics, protein stru	99.78
3m2o_A	164	Glyoxalase/bleomycin resistance protein; unknown f	99.78
2i7r_A	118	Conserved domain protein; structural genomics cons	99.74
1qto_A	122	Bleomycin-binding protein; arm-exchange, antibioti	99.73
1xrk_A	124	Bleomycin resistance protein; arm exchange, ligand	99.72
4g6x_A	155	Glyoxalase/bleomycin resistance protein/dioxygena;	99.71
3g12_A	128	Putative lactoylglutathione lyase; glyoxalase, ble	99.71
3rhe_A	148	NAD-dependent benzaldehyde dehydrogenase; structur	99.7
3r6a_A	144	Uncharacterized protein; PSI biology, structural g	99.7
2rk9_A	145	Glyoxalase/bleomycin resistance protein/dioxygena;	99.69
1ecs_A	126	Bleomycin resistance protein; arm-exchange, antibi	99.68
2rbb_A	141	Glyoxalase/bleomycin resistance protein/dioxygena;	99.68
2pjs_A	119	AGR_C_3564P, uncharacterized protein ATU1953; glyo	99.67
3ey7_A	133	Biphenyl-2,3-DIOL 1,2-dioxygenase III-related prot	99.67
2p25_A	126	Glyoxalase family protein; structural genomics, MC	99.66
3l7t_A	134	SMU.1112C, putative uncharacterized protein; metal	99.66
4hc5_A	133	Glyoxalase/bleomycin resistance protein/dioxygena;	99.66
3sk2_A	132	EHPR; antibiotic resistance, griseoluteate-binding	99.62
2qqz_A	126	Glyoxalase family protein, putative; alpha-beta st	99.61
4gym_A	149	Glyoxalase/bleomycin resistance protein/dioxygena;	99.61
3kol_A	156	Oxidoreductase, glyoxalase/bleomycin resistance pr	99.61
3r4q_A	160	Lactoylglutathione lyase; structural genomics, PSI	99.61
3bqx_A	150	Glyoxalase-related enzyme; VOC superfamily, PSI-2,	99.61
3uh9_A	145	Metallothiol transferase FOSB 2; structural genomi	99.6
1f9z_A	135	Glyoxalase I; beta-alpha-beta-BETA-beta motif, pro	99.6
2a4x_A	138	Mitomycin-binding protein; ALFA/beta protein, mito	99.6
3rmu_A	134	Methylmalonyl-COA epimerase, mitochondrial; struct	99.59
3huh_A	152	Virulence protein STM3117; structural genomics, ny	99.59
3rri_A	135	Glyoxalase/bleomycin resistance protein/dioxygena;	99.59
1ss4_A	153	Glyoxalase family protein; structural genomics, PS	99.59
2r6u_A	148	Uncharacterized protein; structural genomics, PSI-	99.58
3e5d_A	127	Putative glyoxalase I; structural genomics, joint	99.57
2zw5_A	301	Bleomycin acetyltransferase; dimer, two domains; H	99.57
3zw5_A	147	Glyoxalase domain-containing protein 5; lyase; 1.6	99.57
1npb_A	141	Fosfomycin-resistance protein; manganese binding,	99.56
3oa4_A	161	Glyoxalase, BH1468 protein; structural genomics, p	99.56
3bt3_A	148	Glyoxalase-related enzyme, ARAC type; VOC superfam	99.56
2kjz_A	144	ATC0852; protein of unknown function, dimer, struc	99.56
3hdp_A	133	Glyoxalase-I; glutathione,lyase, methylglyoxal,110	99.56
1nki_A	135	Probable fosfomycin resistance protein; potassium	99.55
2c21_A	144	Trypanothione-dependent glyoxalase I; lyase, gluta	99.55
2qnt_A	141	AGR_C_3434P, uncharacterized protein ATU1872; glyo	99.55
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.54
3vw9_A	187	Lactoylglutathione lyase; glyoxalase, lyase-lyase	99.54
2p7o_A	133	Glyoxalase family protein; fosfomycin resistance p	99.54
2rk0_A	136	Glyoxalase/bleomycin resistance protein/dioxygena;	99.54
3oxh_A	282	RV0577 protein; kinase regulation, antibiotic resi	99.54
2za0_A	184	Glyoxalase I; lyase, lactoylglutathione lyase, met	99.54
1r9c_A	139	Glutathione transferase; fosfomycin resistance pro	99.52
3ghj_A	141	Putative integron gene cassette protein; integron	99.52
1jc4_A	148	Methylmalonyl-COA epimerase; vicinal oxygen chelat	99.49
3ct8_A	146	Protein BH2160, putative glyoxalase; NP_243026.1,	99.46
1xqa_A	113	Glyoxalase/bleomycin resistance protein; dioxygena	99.44
1twu_A	139	Hypothetical protein YYCE; structural genomics, pr	99.44
3gm5_A	159	Lactoylglutathione lyase and related lyases; sheet	99.41
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.34
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.26
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.23
1zsw_A	338	Metallo protein, glyoxalase family protein; hypoth	99.21
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.19
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	99.19
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.19
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.19
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.17
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.17
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.16
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.16
1mpy_A	307	Catechol 2,3-dioxygenase; extradiol dioxygenase, n	99.15
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	99.13
3lm4_A	339	Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein	99.13
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.12
2zyq_A	300	Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; e	99.1
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	99.09
3hpy_A	309	Catechol 2,3-dioxygenase; repeated motifs, aromati	99.08
3pkv_A	252	Toxoflavin lyase (TFLA); metalloenzyme, vicinal ox	99.08
2wl9_A	305	Catechol 2,3-dioxygenase; aromatic hydrocarbons ca	99.06
1lgt_A	297	Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxy	99.06
3b59_A	310	Glyoxalase/bleomycin resistance protein/dioxygena;	99.06
1f1u_A	323	Homoprotocatechuate 2,3-dioxygenase; extradiol, ma	99.04
3zi1_A	330	Glyoxalase domain-containing protein 4; isomerase;	99.03
2ehz_A	302	1,2-dihydroxynaphthalene dioxygenase; extradiol di	99.02
1kw3_B	292	2,3-dihydroxybiphenyl dioxygenase; four TIME repet	98.95
3oaj_A	335	Putative ring-cleaving dioxygenase MHQO; structura	98.92
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	98.77
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	98.74
2r5v_A	357	PCZA361.1; dioxygenase, non-heme iron, vancomycin,	98.57
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.53
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	98.4
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	98.29
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	98.29
4ghg_A	365	Homoprotocatechuate 2,3-dioxygenase; oxygen activa	98.08
1t47_A	381	4-hydroxyphenylpyruvate dioxygenase; triketone inh	98.06
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.93
1cjx_A	357	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.82
3isq_A	393	4-hydroxyphenylpyruvate dioxygenase; tyrosine meta	97.46
1sp8_A	418	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.3
1sqd_A	424	4-hydroxyphenylpyruvate dioxygenase; oxidoreductas	97.15
3opy_B	941	6-phosphofructo-1-kinase beta-subunit; ATP binding	95.64
3e0r_A	244	C3-degrading proteinase (CPPA protein); MCSG, PSI,	95.3

>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0

Probab=99.86  E-value=9e-21  Score=126.70  Aligned_cols=95  Identities=15%  Similarity=0.270  Sum_probs=74.8

Q ss_pred             CcceeEEEEecCCCHHHHHHHHHhhhC-e----------------------EEEEcCeEEEEecCCCCCccccCCCcceE
Q 044588           10 FMGMKPQLLVEESKATNVVQFYKTTSG-A----------------------QLEIAGSTFLVSNFSNDSAAAKNMGIGCV   66 (117)
Q Consensus        10 ~~~~~p~L~v~~~D~~~a~~FY~~~fG-~----------------------~l~~~~~~l~~~~~~~~g~~~~~~~~~~~   66 (117)
                      +.+++|||.++ +|+++|++||+++|| .                      +|+++|..||+.+..+ +... ..+++++
T Consensus         8 ~~~i~P~L~f~-g~a~eA~~FY~~vFg~~~i~~~~~~~~~~~~~~g~v~ha~l~i~g~~lm~~d~~~-~~~~-~~~~~~~   84 (138)
T 3oms_A            8 NQKITTFLMFE-GKAEEAMNFYTSLFDQSEIVSISRYDENGPGKEGTVIHATFTLNGQEFMCIDSYV-NHNF-TFTPAMS   84 (138)
T ss_dssp             -CCCCEEEEES-SCHHHHHHHHHTTSTTCCEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEECSS-CCSC-CCCTTSC
T ss_pred             cccEEEEEEEC-CCHHHHHHHHHHHcCCceEEEEEecCCCCCCCCCcEEEEEEEECCEEEEEEcCCC-CCCC-CCCCCEE
Confidence            67899999998 379999999999999 2                      3445666777776532 2211 2236789


Q ss_pred             EEEEeCC---HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           67 LCLEIDD---VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        67 l~l~v~d---vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      |+|.|+|   +|++|+||. +|+++         |.|+++|+||+|+.|+|..+
T Consensus        85 l~l~~~d~~evd~~~~~l~-~Gg~v~~p~~~~~wg~~~~~~~Dp~G~~W~i~~~  137 (138)
T 3oms_A           85 LYVTCETEEEIDTVFHKLA-QDGAILMPLGSYPFSKKFGWLNDKYGVSWQLTLA  137 (138)
T ss_dssp             EEEEESSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEcCCHHHHHHHHHHHH-cCCeEecCcccccCCcEEEEEECCCCCEEEEEeC
Confidence            9999999   999999985 68887         78999999999999999864

>3l20_A Putative uncharacterized protein; hypothetical protein, unknown function; 2.45A {Staphylococcus aureus}

Probab=99.84  E-value=3.5e-20  Score=128.12  Aligned_cols=98  Identities=21%  Similarity=0.375  Sum_probs=75.1

Q ss_pred             cCCCcceeEEEEecCCCHHHHHHHHHhhhCeEE------------------------------EEcCeEEEEecCCCCCc
Q 044588            7 LANFMGMKPQLLVEESKATNVVQFYKTTSGAQL------------------------------EIAGSTFLVSNFSNDSA   56 (117)
Q Consensus         7 ~~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l------------------------------~~~~~~l~~~~~~~~g~   56 (117)
                      +|-|.+++|||.++  |+++|++||+++||.++                              +++|..||+.+..  |.
T Consensus        21 ~mmm~~i~PyL~f~--~a~eAi~FY~~vFG~~~~~~~~~~d~p~~~~~~~~~~~~g~v~hael~i~g~~lm~~D~~--g~   96 (172)
T 3l20_A           21 MFYMTALFPYIAFE--NSKEALAYYEEVFGATDVKRLEVGEEQASHFGMTKEEAQEATMHAEFEVLGVKVLCSDSF--GR   96 (172)
T ss_dssp             CCCCCEEEEEEEES--CHHHHHHHHHHHSCCEEEEEEECCTTTTTTTTCCHHHHHTCEEEEEEEETTEEEEEEECT--TC
T ss_pred             eEecCcEEEEEEEC--CHHHHHHHHHHHcCCEEEEEEEcccCCcccccCCcccCCCcEEEEEEEECCEEEEEECCC--CC
Confidence            35556899999999  99999999999999332                              2344556666642  22


Q ss_pred             cccCCCcceEEEEEe--------CCHHHHHHHHHhCC-Cee---------eceEEEEECCCCCeEEEeccc
Q 044588           57 AAKNMGIGCVLCLEI--------DDVEAALAKAMSGG-VWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        57 ~~~~~~~~~~l~l~v--------~dvd~~~~~~~~~G-~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .. ..+++++|+|.+        +|+|++|+||+++| +++         |.|+++|+||||+.|+|....
T Consensus        97 ~~-~~~~~~sl~l~~~~~d~~~~~dvd~~~~~l~~~G~a~v~~p~~~~~wG~r~g~v~DpfG~~W~i~~~~  166 (172)
T 3l20_A           97 AD-KINNGISLLIDYDVNNKEDADKVEAFYEQIKDHSSIEIELPFADQFWGGKMGVFTDKYGVRWMLHGQD  166 (172)
T ss_dssp             CC-CCCSSEEEEEEEETTCHHHHHHHHHHHHHHTTCTTCEEEEEEEECTTSSEEEEEECTTSCEEEEEEEC
T ss_pred             CC-CCCCcEEEEEEEccCccCcHHHHHHHHHHHHhCCCceEecCccccCCCcEEEEEECCCCCEEEEEeCC
Confidence            21 233667777777        58999999999999 577         789999999999999998754

>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7

Probab=99.83  E-value=1.1e-19  Score=121.33  Aligned_cols=96  Identities=14%  Similarity=0.245  Sum_probs=70.4

Q ss_pred             CCCcceeEEEEecCCCHHHHHHHHHhhh-CeEEE----------------------EcCeEEEEecCCCCCccccCCCcc
Q 044588            8 ANFMGMKPQLLVEESKATNVVQFYKTTS-GAQLE----------------------IAGSTFLVSNFSNDSAAAKNMGIG   64 (117)
Q Consensus         8 ~~~~~~~p~L~v~~~D~~~a~~FY~~~f-G~~l~----------------------~~~~~l~~~~~~~~g~~~~~~~~~   64 (117)
                      |+.++++|+|.+. +|+++|++||+++| |+++.                      +++..+++.+..+    .... . 
T Consensus         1 M~~~~i~p~l~~~-~d~~eA~~FY~~~f~G~~~~~~~~~~~~~~~~~~~v~ha~l~~~~~~~m~~d~~~----~~~~-~-   73 (139)
T 1tsj_A            1 MDIPKITTFLMFN-NQAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANS----GTEL-P-   73 (139)
T ss_dssp             CCCCSEEEEEECS-SCHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC------------C-
T ss_pred             CCCCceeEEEEEC-CCHHHHHHHHHHHcCCCEEEEEEecCcCCCCCCCcEEEEEEEECCEEEEEECCCC----CCCc-e-
Confidence            5678999999997 48999999999999 85543                      1222333333211    1111 3 


Q ss_pred             eEEEEEeCC---HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecccCC
Q 044588           65 CVLCLEIDD---VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        65 ~~l~l~v~d---vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      ++|+|.|+|   +|++|++|. +|+++         |.|+++|+||+|+.|+|+.+...
T Consensus        74 ~sl~~~~~d~~evd~~~~~l~-~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~~~~  131 (139)
T 1tsj_A           74 ISLFVTVKDTIEMERLFNGLK-DEGAILMPKTNMPPYREFAWVQDKFGVSFQLALPEEG  131 (139)
T ss_dssp             CCEEEECSSHHHHHHHHHHHH-TTCEEEEEEEEETTEEEEEEEECTTSCEEEEEECC--
T ss_pred             EEEEEECCCHHHHHHHHHHHh-CCCEEeecccccCCCceEEEEECCCCCEEEEeecccc
Confidence            789999987   788999987 79888         78999999999999999987653

>3fcd_A Lyase, ORF125EGC139; lactoylglutathione lyase, YECM, PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.92A {Uncultured bacterium} SCOP: d.32.1.0

Probab=99.83  E-value=1.8e-19  Score=117.99  Aligned_cols=104  Identities=15%  Similarity=0.235  Sum_probs=72.7

Q ss_pred             cccCCCcceeEEEEecCCCHHHHHHHHHhhhCeE----------EEEcCeEEEEecCCCCCccccCCCcceEEEEEeCCH
Q 044588            5 ATLANFMGMKPQLLVEESKATNVVQFYKTTSGAQ----------LEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDV   74 (117)
Q Consensus         5 ~~~~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~----------l~~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dv   74 (117)
                      |.+|++..+.|.|.|+  |+++|++||+++||.+          +..++..+.+..... ....+..+.+++++|.|+|+
T Consensus         1 M~~~~~~~~~~~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~l~~~~~~l~l~~~~~-~~~~~~~~~~~~l~~~v~dv   77 (134)
T 3fcd_A            1 MSLSDIHQITPFLHIP--DMQEALTLFCDTLGFELKYRHSNYAYLELSGCGLRLLEEPA-RKIIPDGIARVAICIDVSDI   77 (134)
T ss_dssp             -----CCEEEEEEEES--CHHHHHHHHTTTTCCEEEEEETTEEEEEETTEEEEEEECCC-C---------EEEEEECSCH
T ss_pred             CchhhhhcceeEEEEC--CHHHHHHHHHhccCcEEEEeCCCeEEEEECCEEEEEEeCCC-CCcCCCCCceEEEEEEeCCH
Confidence            5678899999999999  9999999999999943          344555566554321 11111122568999999999


Q ss_pred             HHHHHHHHhC----CCee---------eceEEEEECCCCCeEEEecccCC
Q 044588           75 EAALAKAMSG----GVWA---------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        75 d~~~~~~~~~----G~~v---------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      +++++++.++    |+++         |.|.++++||+||.|+|.+...+
T Consensus        78 ~~~~~~l~~~g~~~g~~i~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~  127 (134)
T 3fcd_A           78 DSLHTKLSPALENLPADQVEPLKNMPYGQREFQVRMPDGDWLNFTAPLAE  127 (134)
T ss_dssp             HHHHHHHHHHHTTSCGGGEEEEEECTTSEEEEEEECTTSCEEEEEEECCT
T ss_pred             HHHHHHHHhcCCccCCccccCCcccCCCcEEEEEECCCCCEEEEEEcccc
Confidence            9999999854    4443         55899999999999999998754

>1u7i_A Hypothetical protein; structural genomics, PA1358, PSI, PROT structure initiative; HET: MSE; 1.40A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.81  E-value=7.6e-19  Score=115.92  Aligned_cols=95  Identities=15%  Similarity=0.224  Sum_probs=71.8

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhh-CeEEEE----------------------cCeEEEEecCCCCCccccCCCcceEE
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTS-GAQLEI----------------------AGSTFLVSNFSNDSAAAKNMGIGCVL   67 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~f-G~~l~~----------------------~~~~l~~~~~~~~g~~~~~~~~~~~l   67 (117)
                      ++++|+|.|+..|+++|++||+++| |+++..                      ++..+++.+... . +....+.+++|
T Consensus         5 ~~i~~~L~v~~~d~~~A~~FY~~~f~G~~~~~~~~~~~~~~~~~~~~~~a~~~~~g~~~~~~~~~~-~-~~~~~~~~~~l   82 (136)
T 1u7i_A            5 ARVRPFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHV-R-HAFDFTPAFSF   82 (136)
T ss_dssp             CEEEEEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESS-C-CSCCCCTTEEE
T ss_pred             ccceEEEEECCCCHHHHHHHHHHHcCCCEeeEEEEcccCCCCCCCcEEEEEEEECCEEEEEECCCC-C-CCCCCCCceEE
Confidence            5789999998448999999999999 966542                      122233333210 0 11112367899


Q ss_pred             EEEeCC---HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           68 CLEIDD---VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        68 ~l~v~d---vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +|.|+|   +|++++||+ +|+++         |.|+++|+||+||.|+|.++
T Consensus        83 ~~~v~d~~evd~~~~~l~-~Gg~v~~p~~~~~~G~~~~~~~Dp~G~~w~l~~~  134 (136)
T 1u7i_A           83 FVDCESNAQIERLAEALS-DGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  134 (136)
T ss_dssp             EEECCCHHHHHHHHHHHH-TTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             EEEcCCHHHHHHHHHHHH-cCCEEecccccCCCcceEEEEECCCCCEEEEEec
Confidence            999999   999999999 99988         67999999999999999874

>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.81  E-value=4.5e-19  Score=121.60  Aligned_cols=93  Identities=19%  Similarity=0.223  Sum_probs=73.6

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhh-Ce-----------------------EEEEcCeEEEEecCCCCCccccCCCcceE
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTS-GA-----------------------QLEIAGSTFLVSNFSNDSAAAKNMGIGCV   66 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~f-G~-----------------------~l~~~~~~l~~~~~~~~g~~~~~~~~~~~   66 (117)
                      .+++|||.++ +|+++|++||+++| |+                       +|+++|..+++.+..+ +.   +...+++
T Consensus         5 ~~i~PyL~f~-g~a~eAi~FY~~vF~ga~i~~~~~~~~~~~~~~~g~Vmhael~i~g~~~m~~d~~p-~~---~~~~~~s   79 (163)
T 1u69_A            5 SKNTICLWYD-SAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGP-AF---RHSEAFS   79 (163)
T ss_dssp             CCEEEEEEES-SCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCT-TC---CCCTTEE
T ss_pred             CceeEEEEEC-CCHHHHHHHHHHHhCCCEEeEEEeccCCCCCCCCCeEEEEEEEECCEEEEEECCCC-Cc---CCCCceE
Confidence            4899999998 48999999999999 73                       3445555666666432 11   1236789


Q ss_pred             EEEEeCC---HHHHHHHHHhCCCeeeceEEEEECCCCCeEEEeccc
Q 044588           67 LCLEIDD---VEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        67 l~l~v~d---vd~~~~~~~~~G~~vg~r~~~v~DP~G~~w~l~~~~  109 (117)
                      |+|.|+|   +|+.|++|.++|+++ .++++|+||||+.|+|..+.
T Consensus        80 l~v~~~d~~e~d~~~~~L~~~Gg~v-~~~G~v~D~fGv~W~i~~~~  124 (163)
T 1u69_A           80 FQVATDDQAETDRLWNAIVDNGGEE-SACGWCRDKWGISWQITPRV  124 (163)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTTCEE-CSTTEEECTTSCEEEEEEHH
T ss_pred             EEEEeCCHHHHHHHHHHHHhCCCEE-EEEEEEECCCCCEEEEEeEc
Confidence            9999987   678899988789887 48999999999999999875

>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}

Probab=99.81  E-value=1.4e-18  Score=113.50  Aligned_cols=98  Identities=17%  Similarity=0.227  Sum_probs=74.7

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhCeEEE---------------EcCeEEEEecCCC-CCccccCCCcce-EEEEEeCC
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSGAQLE---------------IAGSTFLVSNFSN-DSAAAKNMGIGC-VLCLEIDD   73 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~---------------~~~~~l~~~~~~~-~g~~~~~~~~~~-~l~l~v~d   73 (117)
                      +.+.+.|.|+  |+++|++||+++||.++.               .++..+++....+ .+. ....+.++ +++|.|+|
T Consensus         2 ~~~~i~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~g~~~~~~l~~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~v~d   78 (137)
T 3itw_A            2 SHMVVELAYT--DPDRAVDWLVRVFGFRLLLRQPAIGTIRHADLDTGGGIVMVRRTGEPYTV-SCAGGHTCKQVIVWVSD   78 (137)
T ss_dssp             CCCEEEEEES--CHHHHHHHHHHHHCCEEEEEESSSSSCSEEEEECSSSEEEEEETTCCSSC-EECCCCCCCEEEEEESC
T ss_pred             CeEEEEEEEC--CHHHHHHHHHHccCCEEEEEecCCCcEEEEEEecCCeEEEEEecCCCcCc-cCCCCCcEEEEEEEeCC
Confidence            3578899999  999999999999995443               2344566654332 111 11223566 99999999


Q ss_pred             HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecccCC
Q 044588           74 VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        74 vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      +++++++++++|+++         |.+.++++||+||.|+|.++.+.
T Consensus        79 v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~  125 (137)
T 3itw_A           79 VDEHFMRSTAAGADIVQPLQDKPWGLRQYLVRDLEGHLWEFTRHLRD  125 (137)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEEETTTEEEEEEECSSSCEEEEEECC--
T ss_pred             HHHHHHHHHHcCCeeccCccccCCCcEEEEEECCCCCEEEEEEEcCC
Confidence            999999999999987         45899999999999999998754

>1u6l_A Hypothetical protein; structural genomics, PSI, protein STRU initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.81A {Pseudomonas aeruginosa} SCOP: d.32.1.7

Probab=99.79  E-value=4.1e-18  Score=114.28  Aligned_cols=97  Identities=18%  Similarity=0.348  Sum_probs=70.8

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhCeEEEE----------------------------cCeEEEEecCCCCCccccCCC
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSGAQLEI----------------------------AGSTFLVSNFSNDSAAAKNMG   62 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~----------------------------~~~~l~~~~~~~~g~~~~~~~   62 (117)
                      |++.|+|.|+ +|+++|++||+++||+++..                            ++..+++.+..+. . ..+..
T Consensus         3 m~~~p~L~v~-~d~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~l~~~d~~~~-~-~~~~~   79 (149)
T 1u6l_A            3 LQIVPYLIFN-GNCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHPA-Y-PYEGI   79 (149)
T ss_dssp             CEEEEEEEES-SCHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCTT-S-CCCCC
T ss_pred             ceEEEEEEEC-CCHHHHHHHHHHHhCCEEEEEEEcccCCcccCCCcccCCcEEEEEEEECCEEEEEEcCCCc-c-CCCCC
Confidence            5699999997 49999999999999965542                            1122333332110 0 01122


Q ss_pred             cceEEEEEeCC---HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecccCC
Q 044588           63 IGCVLCLEIDD---VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        63 ~~~~l~l~v~d---vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      .+++|+|.|+|   +|++++++ ++|+++         |.|+++|+||+|+.|+|+++...
T Consensus        80 ~g~~l~~~v~d~~evd~~~~~l-~~Gg~i~~p~~~~~wG~r~~~v~Dp~G~~w~l~~~~~~  139 (149)
T 1u6l_A           80 KGCSISLNVDSKAEAERLFNAL-AEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQDR  139 (149)
T ss_dssp             CSEEEEEECSSHHHHHHHHHHH-HTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESCC-
T ss_pred             CceEEEEEcCCHHHHHHHHHHH-HCCCEEeecccccCcccceEEEECCCCCEEEEEEeccc
Confidence            56899999998   78999996 589887         67999999999999999987654

>1xy7_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G48480, reductively methylated protein, CATH 3.10.180 fold; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.9 PDB: 2q48_A

Probab=99.78  E-value=5.1e-18  Score=115.71  Aligned_cols=104  Identities=37%  Similarity=0.528  Sum_probs=73.4

Q ss_pred             cCCCcceeEEEEecCCC--HHHHHHHHHhhhCeEEE-----------------------EcCeEEEEecCCCC-CccccC
Q 044588            7 LANFMGMKPQLLVEESK--ATNVVQFYKTTSGAQLE-----------------------IAGSTFLVSNFSND-SAAAKN   60 (117)
Q Consensus         7 ~~~~~~~~p~L~v~~~D--~~~a~~FY~~~fG~~l~-----------------------~~~~~l~~~~~~~~-g~~~~~   60 (117)
                      -.+++++.|+|.|+  |  +++|++||+++||+++.                       +++..|++.+..+. +.+...
T Consensus        20 ~~~~~~i~~~L~v~--D~~~~~A~~FY~~vfG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~g~~l~l~~~~~~~~~~~~~   97 (166)
T 1xy7_A           20 HLVFTEFKQMLLVE--AQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAK   97 (166)
T ss_dssp             CCCEEEEEEEEEEC--TTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCC
T ss_pred             CCCCceEEEEEEEC--CcCHHHHHHHHHHHhCCEEEEEEccCCCCCCCCCCcEEEEEEEECCeEEEEeCCCcccCCcccc
Confidence            34577899999999  8  99999999999996543                       12223444332110 111100


Q ss_pred             C-CcceEEEEEeCCHHHHHHHHHhCCCee-----e----ceEEEEECCCCCeEEEecccCCC
Q 044588           61 M-GIGCVLCLEIDDVEAALAKAMSGGVWA-----T----GRVGKVKDPCGFTWLIYSPVKKC  112 (117)
Q Consensus        61 ~-~~~~~l~l~v~dvd~~~~~~~~~G~~v-----g----~r~~~v~DP~G~~w~l~~~~~~~  112 (117)
                      . +.+++|+|.|+|+|+++++++++|+++     .    .|+++|+||+||.|+|+++.+..
T Consensus        98 ~~~~g~~l~~~vdDvda~~~~l~~~G~~~~~~~~~~~~~~r~~~v~DP~G~~~~l~~~~~~~  159 (166)
T 1xy7_A           98 SEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAEKKTVI  159 (166)
T ss_dssp             TTSCCCEEEEECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC-----
T ss_pred             CCCCcEEEEEEcCCHHHHHHHHHHCCCEECCcccccCcccEEEEEECCCCCEEEEEeecCCC
Confidence            0 357899999999999999999999875     2    48999999999999999987543

>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2

Probab=99.74  E-value=8e-17  Score=102.50  Aligned_cols=95  Identities=17%  Similarity=0.269  Sum_probs=70.1

Q ss_pred             Ccce-eEEEEecCCCHHHHHHHHHhhhCe----------EEEEcCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHH
Q 044588           10 FMGM-KPQLLVEESKATNVVQFYKTTSGA----------QLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAAL   78 (117)
Q Consensus        10 ~~~~-~p~L~v~~~D~~~a~~FY~~~fG~----------~l~~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~   78 (117)
                      +|++ ...|.++  |+++|++||+++||.          .+..++..+++....  ..+....+.+++++|.|+|+++++
T Consensus         3 ~m~i~~v~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~l~l~~~~--~~~~~~~~~~~~~~~~v~d~~~~~   78 (118)
T 2i7r_A            3 AMNLNQLDIIVS--NVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNH--LVPLENFQSGIIIHIEVEDVDQNY   78 (118)
T ss_dssp             -CEEEEEEEECS--CHHHHHHHHHHHHTSCCSEEETTEEEEEETTEEEEEESSC--SSSCCCCCSCEEEEEECSCHHHHH
T ss_pred             cceeeEEEEEeC--CHHHHHHHHHHHhCCeeEEeCCCEEEEEeCCeEEEEEcCC--CCCcccCCCeEEEEEEECCHHHHH
Confidence            4554 3567777  999999999999993          344555555553321  111112236788999999999999


Q ss_pred             HHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           79 AKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        79 ~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +++.++|+++         |.+.++++||+||.|+|.+.
T Consensus        79 ~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  117 (118)
T 2i7r_A           79 KRLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  117 (118)
T ss_dssp             HHHHHHTCCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             HHHHHCCCceecCCccccCccEEEEEECCCccEEEEEec
Confidence            9999999986         45889999999999999864

>1qto_A Bleomycin-binding protein; arm-exchange, antibiotic inhibitor; 1.50A {Streptomyces verticillus} SCOP: d.32.1.2 PDB: 1jie_A* 1jif_A

Probab=99.73  E-value=4.5e-17  Score=104.74  Aligned_cols=93  Identities=19%  Similarity=0.211  Sum_probs=71.7

Q ss_pred             CCCcceeEEEEecCCCHHHHHHHHHhhhCeEEEE----------cCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHH
Q 044588            8 ANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEI----------AGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAA   77 (117)
Q Consensus         8 ~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~----------~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~   77 (117)
                      |++..+.+.|.++  |+++|++||+++||.++..          ++..+.+....  ..+   .+.+.+++|.|+|++++
T Consensus         2 ~~~~~~~~~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~l~~~~--~~~---~~~~~~~~~~v~dvd~~   74 (122)
T 1qto_A            2 VKFLGAVPVLTAV--DVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTE--HQI---VADNTSAWIEVTDPDAL   74 (122)
T ss_dssp             CCCCCCCCEEEES--SHHHHHHHHHHTTCCEEEEECSSEEEEEETTEEEEEEECS--CHH---HHTTCEEEEEESCHHHH
T ss_pred             CcccceeEEEEcC--CHHHHHHHHHhccCcEEeeCCCCEEEEEECCEEEEEEcCC--CCC---CCCceEEEEEECCHHHH
Confidence            4567788999999  9999999999999955432          33334443221  111   12457999999999999


Q ss_pred             HHHHHhC------CC--ee---------eceEEEEECCCCCeEEEecc
Q 044588           78 LAKAMSG------GV--WA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        78 ~~~~~~~------G~--~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++++.++      |+  ++         | +.++++||+||.|+|.++
T Consensus        75 ~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~  121 (122)
T 1qto_A           75 HEEWARAVSTDYADTSGPAMTPVGESPAG-REFAVRDPAGNCVHFTAG  121 (122)
T ss_dssp             HHHHTTTSCSCTTCTTSCEECCCEEETTE-EEEEEECTTSCEEEEEEC
T ss_pred             HHHHHhhccccccCccccccCCCcCCCCC-cEEEEECCCCCEEEEecC
Confidence            9999999      98  65         4 889999999999999875

>1xrk_A Bleomycin resistance protein; arm exchange, ligand binding protein, thermostable mutant, antibiotic inhibitor; HET: BLM; 1.50A {Streptoalloteichus hindustanus} SCOP: d.32.1.2 PDB: 2zhp_A* 1byl_A

Probab=99.72  E-value=1.9e-16  Score=102.11  Aligned_cols=94  Identities=15%  Similarity=0.131  Sum_probs=71.0

Q ss_pred             CCCcceeEEEEecCCCHHHHHHHHHhhhCeEEE----------EcCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHH
Q 044588            8 ANFMGMKPQLLVEESKATNVVQFYKTTSGAQLE----------IAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAA   77 (117)
Q Consensus         8 ~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~----------~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~   77 (117)
                      |++..+.+.|.++  |+++|++||+++||.++.          .++..+.+....  +   ...+.+.+++|.|+|++++
T Consensus         2 ~~~~~~~~~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~l~l~~~~--~---~~~~~~~~~~~~v~dv~~~   74 (124)
T 1xrk_A            2 AKLTSAVPVLTAR--DVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFISAVQ--D---QVVPDNTQAWVWVRGLDEL   74 (124)
T ss_dssp             CEEEEEEEEEEES--CHHHHHHHHHHTTCCEEEEECSSEEEEEETTEEEEEEECS--C---TTTGGGCEEEEEEECHHHH
T ss_pred             CcccceeEEEEcC--CHHHHHHHHHHccCceEEecCCCEEEEEECCEEEEEEcCC--C---CCCCCceEEEEEECCHHHH
Confidence            3456678888888  999999999999995443          233334443221  1   1122567999999999999


Q ss_pred             HHHHHhC------CC--ee---------eceEEEEECCCCCeEEEeccc
Q 044588           78 LAKAMSG------GV--WA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        78 ~~~~~~~------G~--~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++++.++      |+  ++         | +.++++||+||.|+|.++.
T Consensus        75 ~~~l~~~~~~~~~G~~~~~~~~~~~~~~g-~~~~~~DPdG~~iel~~~~  122 (124)
T 1xrk_A           75 YAEWSEVVSTNFRDASGPAMTEIVEQPWG-REFALRDPAGNCVHFVAEE  122 (124)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEETTE-EEEEEECTTCCEEEEEEC-
T ss_pred             HHHHHHhcccccCCccccccCCceecCCC-CEEEEECCCCCEEEEEEec
Confidence            9999999      98  55         4 8899999999999999865

>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}

Probab=99.71  E-value=6.3e-17  Score=108.23  Aligned_cols=99  Identities=18%  Similarity=0.196  Sum_probs=68.0

Q ss_pred             Ccce-eEEEEecCCCHHHHHHHHHhhhCeEEEE----cCeE-EEEecCC-CCC---------ccc----c---CCCcceE
Q 044588           10 FMGM-KPQLLVEESKATNVVQFYKTTSGAQLEI----AGST-FLVSNFS-NDS---------AAA----K---NMGIGCV   66 (117)
Q Consensus        10 ~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l~~----~~~~-l~~~~~~-~~g---------~~~----~---~~~~~~~   66 (117)
                      .|++ ...|.|+  |+++|++||+++||.++..    ++.. +.+.... ..+         .+.    .   ..+...+
T Consensus        24 ~Mri~~v~I~V~--Dle~A~~FY~dvLGf~v~~d~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~  101 (155)
T 4g6x_A           24 AMRIHLTNVFVD--DQAKAESFYTGKLGFLVKADVPVGADRWLTVVSPEAPDGTQLLLEPSSHAAVTPFKEALVADGIPA  101 (155)
T ss_dssp             CCCCCEEEEEES--CHHHHHHHHHHTTCCEEEEEEEETTEEEEEEECTTCTTSCEEEEEECCSTTHHHHHHHHHHTTCCS
T ss_pred             ceEEEEEEEEeC--CHHHHHHHHHHHhCCEEEEeecCCCceEEEEeccCCCcceEEEeccCCCccccccccccccCCceE
Confidence            3444 4678888  9999999999999976542    2222 2222111 000         000    0   0112357


Q ss_pred             EEEEeCCHHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEecccC
Q 044588           67 LCLEIDDVEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        67 l~l~v~dvd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++|.|+|+++++++++++|+++        ++|+++|+||+||.|+|.|..+
T Consensus       102 l~f~VdDvda~~~~l~~~Gv~~~~~p~~~~~g~~~~f~DPdGn~iel~q~~~  153 (155)
T 4g6x_A          102 ASFAVDDIAAEYERLSALGVRFTQEPTDMGPVVTAILDDTCGNLIQLMQIAY  153 (155)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCEEEEEEECSSCEEEEEECSSSCEEEEEEC--
T ss_pred             EEeeechhhhhhhHHhcCCcEEeeCCEEcCCeEEEEEECCCCCEEEEEEECC
Confidence            9999999999999999999987        5689999999999999998643

>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}

Probab=99.71  E-value=4e-16  Score=101.61  Aligned_cols=93  Identities=15%  Similarity=0.184  Sum_probs=63.1

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc--------------CeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA--------------GSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALA   79 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~--------------~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~~   79 (117)
                      ...|.|+  |+++|++||++ ||+++...              +..+.+.... .+.  ...+.+++++|.|+|+|++++
T Consensus         9 hv~l~v~--D~~~a~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~-~~~--~~~~~~~~l~f~v~dvd~~~~   82 (128)
T 3g12_A            9 SITINTS--HLQGMLGFYRI-IGFQFTASKVDKGSEVHRAVHNGVEFSLYSIQ-NPQ--RSQIPSLQLGFQITDLEKTVQ   82 (128)
T ss_dssp             EEEEEES--CHHHHHHHHHH-HTCCCEEC-----CCEEEEEETTEEEEEEECC-CCS--SCCCCSEEEEEEESCHHHHHH
T ss_pred             EEEEEcC--CHHHHHHHHHH-CCCEEecccCCCCCEEEEEeCCCeEEEEEECC-CCc--CCCCCceEEEEEeCCHHHHHH
Confidence            3445555  99999999999 99544322              2223332211 111  122356899999999999999


Q ss_pred             HHHhCCCe-e---------eceEEEEECCCCCeEEEecccCCCC
Q 044588           80 KAMSGGVW-A---------TGRVGKVKDPCGFTWLIYSPVKKCA  113 (117)
Q Consensus        80 ~~~~~G~~-v---------g~r~~~v~DP~G~~w~l~~~~~~~~  113 (117)
                      +++++|++ +         |.+ ++|+||+||.|+|.+..+.++
T Consensus        83 ~l~~~G~~~~~~~p~~~~~G~~-~~~~DPdGn~iel~~~~~~~~  125 (128)
T 3g12_A           83 ELVKIPGAMCILDPTDMPDGKK-AIVLDPDGHSIELCELEGHHH  125 (128)
T ss_dssp             HHTTSTTCEEEEEEEECC-CEE-EEEECTTCCEEEEEC------
T ss_pred             HHHHCCCceeccCceeCCCccE-EEEECCCCCEEEEEEeccccc
Confidence            99999999 5         445 999999999999999876543

>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}

Probab=99.70  E-value=3.5e-16  Score=104.38  Aligned_cols=96  Identities=15%  Similarity=0.145  Sum_probs=65.6

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCe----------EEEE-cCeEEEEecCCCCCccccCCCcceEEEEEeCC---HHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGA----------QLEI-AGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDD---VEAALAK   80 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~----------~l~~-~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~d---vd~~~~~   80 (117)
                      ..|.|+  |+++|++||+++||.          .+.. ++..+.+.............+.+.+++|.|+|   +++++++
T Consensus        10 v~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~g~~l~l~~~~~~~~~~~~~~~~~~l~f~v~d~~dvd~~~~~   87 (148)
T 3rhe_A           10 VLFYVK--NPAKSEEFYKNLLDTQPIESSPTFAMFVMKTGLRLGLWAQEEIEPKAHQTGGGMELSFQVNSNEMVDEIHRQ   87 (148)
T ss_dssp             EEEEES--CHHHHHHHHHHHHTCCCSEECSSEEEEECTTSCEEEEEEGGGCSSCCC----CEEEEEECSCHHHHHHHHHH
T ss_pred             EEEEeC--CHHHHHHHHHHHcCCEEeccCCCEEEEEcCCCcEEEEecCCcCCccccCCCCeEEEEEEcCCHHHHHHHHHH
Confidence            356666  999999999999993          3343 34444443221111111112356899999987   9999999


Q ss_pred             HHhCCCee--------eceEEEEECCCCCeEEEecccCCC
Q 044588           81 AMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVKKC  112 (117)
Q Consensus        81 ~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~~~  112 (117)
                      +.++|+++        .++.++++||+||.|+|+++.+..
T Consensus        88 l~~~G~~i~~~p~~~~~G~~~~~~DPdG~~iel~~~~~~a  127 (148)
T 3rhe_A           88 WSDKEISIIQPPTQMDFGYTFVGVDPDEHRLRIFCLKRTA  127 (148)
T ss_dssp             HHHTTCCEEEEEEEETTEEEEEEECTTCCEEEEEEEC---
T ss_pred             HHhCCCEEEeCCeecCCCcEEEEECCCCCEEEEEEcChhH
Confidence            99999987        137899999999999999987643

>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}

Probab=99.70  E-value=1.6e-16  Score=105.84  Aligned_cols=103  Identities=15%  Similarity=0.096  Sum_probs=72.5

Q ss_pred             CCCcceeEEEEecCCCHHHHHHHHHhhhCeEEE--E--c--CeEEEEecCC---CCCccccCCCcceEEEEEeCCHHHHH
Q 044588            8 ANFMGMKPQLLVEESKATNVVQFYKTTSGAQLE--I--A--GSTFLVSNFS---NDSAAAKNMGIGCVLCLEIDDVEAAL   78 (117)
Q Consensus         8 ~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~--~--~--~~~l~~~~~~---~~g~~~~~~~~~~~l~l~v~dvd~~~   78 (117)
                      |+.+++.+.|.|+  |+++|++||+++||.++.  .  .  +..+......   ........+....+++|.|+|+++++
T Consensus         3 M~i~~i~i~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~hl~f~V~d~d~~~   80 (144)
T 3r6a_A            3 MKILQILSRLYVA--DLNPALEFYEELLETPVAMRFEIPQTGVELAQISTILLIAGSEEALKPFRNTQATFLVDSLDKFK   80 (144)
T ss_dssp             CCEEEEEEEEEES--CHHHHHHHHHHHTTCCCCEECCCSCSSCEEEEETTEEEEESCHHHHGGGGGCCEEEEESCHHHHH
T ss_pred             EEEEEEEEEEEEC--CHHHHHHHHHHhcCCEEEEEeccCCccEEEEEeccEEEecCCcccCCCCcceEEEEEeCCHHHHH
Confidence            6667788999999  999999999999994321  1  1  1122111100   00011111224689999999999999


Q ss_pred             HHHHhCCCee--------eceEEEEECCCCCeEEEecccCCC
Q 044588           79 AKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVKKC  112 (117)
Q Consensus        79 ~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~~~  112 (117)
                      +++.++|+++        ++|.++++||+||.|+|.++.+..
T Consensus        81 ~~l~~~G~~v~~~p~~~~~G~~~~~~DPdG~~iel~~~~~~~  122 (144)
T 3r6a_A           81 TFLEENGAEIIRGPSKVPTGRNMTVRHSDGSVIEYVEHSKIE  122 (144)
T ss_dssp             HHHHHTTCEEEEEEEEETTEEEEEEECTTSCEEEEEEECC--
T ss_pred             HHHHHcCCEEecCCccCCCceEEEEECCCCCEEEEEEcCCcc
Confidence            9999999987        248899999999999999987643

>2rk9_A Glyoxalase/bleomycin resistance protein/dioxygena; NYSGXRC, structural genomics, protein structur initiative II; 1.60A {Vibrio splendidus}

Probab=99.69  E-value=6.6e-16  Score=101.81  Aligned_cols=101  Identities=12%  Similarity=0.222  Sum_probs=72.0

Q ss_pred             CCCcceeEEEEecCCCHHHHHHHHHhhhCeEEE------------EcCeEEEEecCCC-CC-----ccccCCCcceEEEE
Q 044588            8 ANFMGMKPQLLVEESKATNVVQFYKTTSGAQLE------------IAGSTFLVSNFSN-DS-----AAAKNMGIGCVLCL   69 (117)
Q Consensus         8 ~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~------------~~~~~l~~~~~~~-~g-----~~~~~~~~~~~l~l   69 (117)
                      +++.++.+.|.|+  |+++|++||+++||.++.            .++..+.+..... ..     ....+.+.++.++|
T Consensus         2 ~~~~~~~~~l~v~--Dl~~s~~FY~~~LG~~~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~~~~   79 (145)
T 2rk9_A            2 SLTLRVVPELYCF--DINVSQSFFVDVLGFEVKYERPDEEFVYLTLDGVDVMLEGIAGKSRKWLSGDLEFPLGSGVNFQW   79 (145)
T ss_dssp             --CCCEEEEEEES--SHHHHHHHHHHTTCCEEEEEEGGGTEEEEEETTEEEEEEEC-----------CCSSTTTTEEEEE
T ss_pred             CccccceEEEEEC--CHHHHHHHHHhccCCEEEeecCCCCEEEEEcCCeEEEEEeccCCCcccccCccccCCCCceEEEE
Confidence            4577899999999  999999999999995543            2344444443210 01     00112235678999


Q ss_pred             EeCCHHHHHHHHHh-CCCee----e------------ceEEEEECCCCCeEEEecccC
Q 044588           70 EIDDVEAALAKAMS-GGVWA----T------------GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        70 ~v~dvd~~~~~~~~-~G~~v----g------------~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      .|+|++++++++.+ +|+++    .            .+.++++||+||.|+|.+...
T Consensus        80 ~v~dvd~~~~~l~~~~G~~~~~~~~~~~~g~~~~~~~~~~~~~~DPdG~~iel~~~~~  137 (145)
T 2rk9_A           80 DVIDIEPLYQRVNESAADSIYLALESKSYQCGDSIATQKQFMVQTPDGYLFRFCQDIH  137 (145)
T ss_dssp             ECSCHHHHHHHHHHHHGGGEEEEEEEEEC-----CCEEEEEEEECTTCCEEEEEEC--
T ss_pred             EECCHHHHHHHHHhhCCCeEecCccccccccCCCCCcceEEEEECCCCCEEEEEEcCC
Confidence            99999999999999 99876    1            267899999999999998653

>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A

Probab=99.68  E-value=1.4e-15  Score=98.11  Aligned_cols=94  Identities=16%  Similarity=0.176  Sum_probs=70.1

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhCeEEE----------EcCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHHHH
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSGAQLE----------IAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAK   80 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~----------~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~~~   80 (117)
                      +.+.+.|.++  |+++|++||++ ||.++.          .++..+.+... + +..  +.+...+++|.|+|+++++++
T Consensus         3 ~~~~~~l~v~--D~~~a~~FY~~-LG~~~~~~~~~~~~~~~~~~~l~l~~~-~-~~~--~~~~~~~~~~~v~dv~~~~~~   75 (126)
T 1ecs_A            3 DQATPNLPSR--DFDSTAAFYER-LGFGIVFRDAGWMILQRGDLMLEFFAH-P-GLD--PLASWFSCCLRLDDLAEFYRQ   75 (126)
T ss_dssp             CEEEEEEEES--CHHHHHHHHHT-TTCEEEEECSSEEEEEETTEEEEEEEC-T-TCC--GGGCCCEEEEEESCHHHHHHH
T ss_pred             ccEEEEEEeC--CHHHHHHHHHH-CCCEEEecCCCEEEEEeCCEEEEEEeC-C-CCC--CCCcceEEEEEECCHHHHHHH
Confidence            4578889998  99999999998 995543          33334444322 1 111  112567899999999999999


Q ss_pred             HHhCCCe--------e--------eceEEEEECCCCCeEEEecccCC
Q 044588           81 AMSGGVW--------A--------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        81 ~~~~G~~--------v--------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      +.++|++        +        |.+.++++||+||.|+|.++...
T Consensus        76 l~~~G~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~  122 (126)
T 1ecs_A           76 CKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQNELL  122 (126)
T ss_dssp             HHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEECCC-
T ss_pred             HHHCCCccccccCccccCCcccCcccEEEEEECCCCCEEEEecchhh
Confidence            9999988        3        45899999999999999987653

>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}

Probab=99.68  E-value=1.6e-15  Score=99.46  Aligned_cols=96  Identities=16%  Similarity=0.173  Sum_probs=67.3

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEE------------EcCeEEEEecC-----CCCCccccCCCcceEEEEEeC---C
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLE------------IAGSTFLVSNF-----SNDSAAAKNMGIGCVLCLEID---D   73 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~------------~~~~~l~~~~~-----~~~g~~~~~~~~~~~l~l~v~---d   73 (117)
                      ...|.|+  |++++++||+++||.++.            .++..+.+...     .....+....+.+++++|.|+   |
T Consensus        11 hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~f~v~~~~d   88 (141)
T 2rbb_A           11 YVNIFTR--DIVAMSAFYQQVFGFQEIESIRSPIFRGLDTGKSCIGFNAHEAYELMQLAQFSETSGIKFLLNFDVDTKEA   88 (141)
T ss_dssp             EEEEECS--CHHHHHHHHHHHHCCEECGGGCBTTEEEEECSSSEEEEECTHHHHHTTCGGGCCCBSCCEEEEEECSCHHH
T ss_pred             EEEEEEC--CHHHHHHHHHHhcCCeeecccCCCceEEeecCCEEEEEcCccccccccccccCCCCCCeEEEEEEcCCHHH
Confidence            4456666  999999999999995542            22333444321     000011111235689999999   5


Q ss_pred             HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecccCC
Q 044588           74 VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        74 vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      ++++++++.++|+++         |.+.++++||+||.|+|.+..+.
T Consensus        89 v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~~  135 (141)
T 2rbb_A           89 VDKLVPVAIAAGATLIKAPYETYYHWYQAVLLDPERNVFRINNVLEG  135 (141)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC--
T ss_pred             HHHHHHHHHHcCCeEecCccccCCccEEEEEECCCCCEEEEEEcccc
Confidence            999999999999987         46889999999999999987643

>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2

Probab=99.67  E-value=3.4e-16  Score=99.43  Aligned_cols=94  Identities=14%  Similarity=0.105  Sum_probs=68.4

Q ss_pred             cCCCcceeEEEEecCCCHHHHHHHHHhhhCeEEEEcCeE-------------EEEecCCCCCccccCCCcceEEEEEeCC
Q 044588            7 LANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEIAGST-------------FLVSNFSNDSAAAKNMGIGCVLCLEIDD   73 (117)
Q Consensus         7 ~~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~~~~-------------l~~~~~~~~g~~~~~~~~~~~l~l~v~d   73 (117)
                      +|++..+.+.|.++  |+++|.+||+++||.++....+.             +.+...   .   ...+...+++|.|+|
T Consensus         3 ~m~i~~i~v~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~l~l~~~---~---~~~~~~~~~~~~v~d   74 (119)
T 2pjs_A            3 HMAVRRVVANIATP--EPARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQVSFARE---G---GSGTDVPDLSIEVDN   74 (119)
T ss_dssp             --CEEEEEEEEECS--CGGGGHHHHTTTTCCCEEEECSSEEEEEEEEEEEEEEEEESS---S---BTTBCCCSEEEEESC
T ss_pred             ccceeEEEEEEEcC--CHHHHHHHHHHhcCCEEEecCCEEEEEecCCCCcEEEEEEcC---C---CCCCceeEEEEEECC
Confidence            35666676777777  99999999999999554332111             111111   0   011245689999999


Q ss_pred             HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           74 VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        74 vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++++++++.++|+++         |.+.++++||+||.|+|.++
T Consensus        75 ~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~  118 (119)
T 2pjs_A           75 FDEVHARILKAGLPIEYGPVTEAWGVQRLFLRDPFGKLINILSH  118 (119)
T ss_dssp             HHHHHHHHHHTTCCCSEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHHHHHCCCccccCCccCCCccEEEEEECCCCCEEEEEec
Confidence            999999999999887         45889999999999999875

>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*

Probab=99.67  E-value=4.8e-15  Score=95.14  Aligned_cols=101  Identities=17%  Similarity=0.159  Sum_probs=71.1

Q ss_pred             CCCcce-eEEEEecCCCHHHHHHHHHhhhCeE----------EEEcCeEEEEecCCC-CCcc-ccCCCcceEEEEEeCC-
Q 044588            8 ANFMGM-KPQLLVEESKATNVVQFYKTTSGAQ----------LEIAGSTFLVSNFSN-DSAA-AKNMGIGCVLCLEIDD-   73 (117)
Q Consensus         8 ~~~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~----------l~~~~~~l~~~~~~~-~g~~-~~~~~~~~~l~l~v~d-   73 (117)
                      |+.+++ ...|.|+  |++++.+||+++||.+          +..++..+.+..... .... ........+++|.|+| 
T Consensus         6 m~~~~i~hi~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~dd   83 (133)
T 3ey7_A            6 MKISHLDHLVLTVA--DIPTTTNFYEKVLGMKAVSFGAGRIALEFGHQKINLHQLGNEFEPKAQNVRVGSADLCFITDTV   83 (133)
T ss_dssp             CCCCEEEEEEEEES--CHHHHHHHHHHHHCCEEEEETTTEEEEEETTEEEEEEETTSCCSSCCTTCCTTCCEEEEECSSC
T ss_pred             eEecccCEEEEEEC--CHHHHHHHHHHccCceEEEecCCeEEEEcCCEEEEEEcCCCCccccCCCCCCCccEEEEEeCcH
Confidence            334444 3566777  9999999999999943          344555555543221 1111 1112244789999997 


Q ss_pred             HHHHHHHHHhCCCee--------e----ceEEEEECCCCCeEEEecccC
Q 044588           74 VEAALAKAMSGGVWA--------T----GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        74 vd~~~~~~~~~G~~v--------g----~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++++++++.++|+++        +    .+.++++||+||.|+|+++.+
T Consensus        84 ~~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~  132 (133)
T 3ey7_A           84 LSDAMKHVEDQGVTIMEGPVKRTGAQGAITSFYFRDPDGNLIEVSTYSN  132 (133)
T ss_dssp             HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEESCC
T ss_pred             HHHHHHHHHHCCCccccCCccccCCCCCeEEEEEECCCCCEEEEEecCC
Confidence            999999999999987        1    278899999999999998753

>2p25_A Glyoxalase family protein; structural genomics, MCSG, PSI-2, protein struct initiative, midwest center for structural genomics, oxidore; 1.70A {Enterococcus faecalis}

Probab=99.66  E-value=3.7e-15  Score=94.70  Aligned_cols=92  Identities=12%  Similarity=0.172  Sum_probs=64.7

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEE----------------EEcCeEEEEecCC-CCCccccCCCcc-eEEEEEeCCHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQL----------------EIAGSTFLVSNFS-NDSAAAKNMGIG-CVLCLEIDDVE   75 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l----------------~~~~~~l~~~~~~-~~g~~~~~~~~~-~~l~l~v~dvd   75 (117)
                      ...|.++  |++++.+||+++||.++                ..++..+.+.... +...+..+.+.+ .+++|.|+|++
T Consensus         8 hi~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~~~~~~v~d~~   85 (126)
T 2p25_A            8 HVAINAS--NYQATKNFYVEKLGFEVLRENHRPEKNDIKLDLKLGSQELEIFISDQFPARPSYPEALGLRHLAFKVEHIE   85 (126)
T ss_dssp             CEEEEES--CHHHHHHHHTTTTCCEEEEEEEEGGGTEEEEEEEETTEEEEEEECTTCCCCCCSSCCSSCCCEEEECSCHH
T ss_pred             eEEEEeC--CHHHHHHHHHHhcCCEEEeeccCCCCcceEEEEecCCeEEEEEeccCCCCCCCCCCCccceEEEEEeCCHH
Confidence            3456777  99999999999999443                2233334443221 111111111123 48999999999


Q ss_pred             HHHHHHHhCCCee---------eceEEEEECCCCCeEEEec
Q 044588           76 AALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        76 ~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      ++++++.++|+++         |.+.++++||+||.|+|.+
T Consensus        86 ~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  126 (126)
T 2p25_A           86 EVIAFLNEQGIETEPLRVDDFTGKKMTFFFDPDGLPLELHE  126 (126)
T ss_dssp             HHHHHHHHTTCCCCCCEECTTTCCEEEEEECTTCCEEEEEC
T ss_pred             HHHHHHHHcCCccccccccCCCCcEEEEEECCCCCEEEeeC
Confidence            9999999999887         4578899999999999975

>3l7t_A SMU.1112C, putative uncharacterized protein; metal binding protein; 1.80A {Streptococcus mutans}

Probab=99.66  E-value=4.1e-15  Score=95.07  Aligned_cols=97  Identities=15%  Similarity=0.241  Sum_probs=67.5

Q ss_pred             CCcce-eEEEEecCCCHHHHHHHHHhhhCeEE----------------EEcCeEEEEec-------CCCC-CccccC-CC
Q 044588            9 NFMGM-KPQLLVEESKATNVVQFYKTTSGAQL----------------EIAGSTFLVSN-------FSND-SAAAKN-MG   62 (117)
Q Consensus         9 ~~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l----------------~~~~~~l~~~~-------~~~~-g~~~~~-~~   62 (117)
                      +++++ ...|.|+  |++++++||+++||.++                ..++..+.+..       .... .....+ .+
T Consensus         2 ~i~~i~hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~   79 (134)
T 3l7t_A            2 KLKAVHHVALIVS--DYDKSYEFYVNQLGFEVIRENHRPKRHDYKLDLKCGDIELEIFGNKLTDSNYCAPPERISWPREA   79 (134)
T ss_dssp             CCCEEEEEEEECS--CHHHHHHHHHHTSCCEEEEEEEETTTTEEEEEEEETTEEEEEEECCTTSTTCCCCCCCCCSSSCC
T ss_pred             ceeeEeEEEEEeC--CHHHHHHHHHHhcCCEEEEEeecCCCcceEEEEecCCeEEEEEecccccccccCCccccCCCCCC
Confidence            44444 3456666  99999999999999333                23344454443       1110 000011 12


Q ss_pred             cc-eEEEEEeCCHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEec
Q 044588           63 IG-CVLCLEIDDVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        63 ~~-~~l~l~v~dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      .+ .+++|.|+|++++++++.++|+++         |.+.++++||+||.|+|.+
T Consensus        80 ~g~~~~~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~e  134 (134)
T 3l7t_A           80 CGLRHLAFYVEDVEASRQELIALGIRVEEVRYDDYTGKKMAFFFDPDGLPLELHE  134 (134)
T ss_dssp             SEEEEEEEECSCHHHHHHHHHHHTCCCCCCEECTTSCCEEEEEECTTCCEEEEEC
T ss_pred             CCeEEEEEEECCHHHHHHHHHhCCCcccceeccCCCceEEEEEECCCCCEEEEeC
Confidence            33 589999999999999999999987         4688999999999999975

>4hc5_A Glyoxalase/bleomycin resistance protein/dioxygena; MCSG, GEBA genomes, structural genomics, midwest center for structural genomics; HET: MSE GOL; 1.45A {Sphaerobacter thermophilus}

Probab=99.66  E-value=2.1e-15  Score=96.81  Aligned_cols=89  Identities=18%  Similarity=0.185  Sum_probs=63.8

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE-----cCe-E-----------EEEecCCCCCccccCCCcceEEEEEeCCHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI-----AGS-T-----------FLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAAL   78 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~-----~~~-~-----------l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~   78 (117)
                      .|.+.  |+++|++||+++||.++..     .+. .           +.+......+ ....++...+++|.|+|+++++
T Consensus        18 ~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~-~~~~~~~~~~~~~~v~d~~~~~   94 (133)
T 4hc5_A           18 TIIVS--DQEKALDFYVNTLGFEKVFDNQLDPNMRFVTVVPPGAQTQVALGLPSWYE-DGRKPGGYTGISLITRDIDEAY   94 (133)
T ss_dssp             EEECS--CHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEECTTCSCEEEEECGGGCS-SCCCSCEEEEEEEEESCHHHHH
T ss_pred             EEEEC--CHHHHHHHHHhCcCCcEeeecccCCCceEEEEECCCCceEEEEecCcccc-cccCCCCeEEEEEEeCCHHHHH
Confidence            55566  9999999999999955432     111 1           2222110000 1112235578999999999999


Q ss_pred             HHHHhCCCee---------eceEEEEECCCCCeEEEec
Q 044588           79 AKAMSGGVWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        79 ~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      +++.++|+++         |.+.++++||+||.|+|.+
T Consensus        95 ~~l~~~G~~~~~~~~~~~~g~~~~~~~DP~G~~~el~e  132 (133)
T 4hc5_A           95 KTLTERGVTFTKPPEMMPWGQRATWFSDPDGNQFFLVE  132 (133)
T ss_dssp             HHHHHTTCEESSSCEECTTSCEEEEEECTTCEEEEEEE
T ss_pred             HHHHHCCCEeecCCCcCCCCCEEEEEECCCCCEEEEEe
Confidence            9999999988         4589999999999999986

>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*

Probab=99.62  E-value=3.6e-14  Score=92.02  Aligned_cols=91  Identities=11%  Similarity=0.107  Sum_probs=65.4

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEE----------EEc-CeEEEEecCCCCCccccCCCcceEEEEEeCC---HHHHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQL----------EIA-GSTFLVSNFSNDSAAAKNMGIGCVLCLEIDD---VEAALA   79 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l----------~~~-~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~d---vd~~~~   79 (117)
                      ...|.|+  |++++++||+++||.++          ..+ +..+.+.....  ......+...+++|.|+|   ++++++
T Consensus        16 ~v~l~v~--D~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~l~l~~~~~--~~~~~~~~~~~~~~~v~~~~dv~~~~~   91 (132)
T 3sk2_A           16 LQLVYVS--NVERSTDFYRFIFKKEPVFVTPRYVAFPSSGDALFAIWSGGE--EPVAEIPRFSEIGIMLPTGEDVDKLFN   91 (132)
T ss_dssp             EEEEECS--CHHHHHHHHHHHHTCCCSEECSSEEEEECSTTCEEEEESSSC--CCCTTSCCCEEEEEEESSHHHHHHHHH
T ss_pred             EEEEEEC--CHHHHHHHHHHHcCCeEEEcCCCEEEEEcCCCcEEEEEeCCC--CCcCCCCCcceEEEEeCCHHHHHHHHH
Confidence            4566777  99999999999999332          222 23444443211  111112245679999986   999999


Q ss_pred             HHHh---CCCee--------eceEEEEECCCCCeEEEecc
Q 044588           80 KAMS---GGVWA--------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        80 ~~~~---~G~~v--------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++.+   +|+++        .++.++++||+||.|+|+++
T Consensus        92 ~l~~~~~~G~~~~~~p~~~~~g~~~~~~DPdGn~iel~~~  131 (132)
T 3sk2_A           92 EWTKQKSHQIIVIKEPYTDVFGRTFLISDPDGHIIRVCPL  131 (132)
T ss_dssp             HHHHCSSSCCEEEEEEEEETTEEEEEEECTTCCEEEEEEC
T ss_pred             HHHhhhcCCCEEeeCCcccCceEEEEEECCCCCEEEEEeC
Confidence            9999   99987        13889999999999999875

>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}

Probab=99.61  E-value=1.8e-14  Score=92.43  Aligned_cols=89  Identities=12%  Similarity=0.023  Sum_probs=64.9

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE---------------cCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI---------------AGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAK   80 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~---------------~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~~~   80 (117)
                      .|.+++.|++++.+||+++||.++..               ++..+.+... +    ...++...+++|.|+|+++++++
T Consensus        15 ~l~v~~~D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~-~----~~~~~~~~~~~f~v~d~~~~~~~   89 (126)
T 2qqz_A           15 QVAAPVGCEEEARAFYGETIGMEEIPKPEELKKRGGCWFKCGNQEIHIGVE-Q----NFNPAKRAHPAFYVLKIDEFKQE   89 (126)
T ss_dssp             EEEECTTTHHHHHHHHTTTTCCEEECCCGGGGGGCCEEEEETTEEEEEEEC-T----TCCCCSSSCEEEEETTHHHHHHH
T ss_pred             EEEcccccHHHHHHHHHhcCCCEEecCcccccCCCceEEEeCCEEEEEEec-C----CCCCCCceEEEEEcCCHHHHHHH
Confidence            44551139999999999999965542               2222333221 1    11122457899999999999999


Q ss_pred             HHhCCCee-------eceEEEEECCCCCeEEEeccc
Q 044588           81 AMSGGVWA-------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        81 ~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +.++|+++       |.+.++++||+||.|+|.++.
T Consensus        90 l~~~G~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  125 (126)
T 2qqz_A           90 LIKQGIEVIDDHARPDVIRFYVSDPFGNRIEFMENK  125 (126)
T ss_dssp             HHHTTCCCEEECSSTTEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHcCCCccCCCCCCCeeEEEEECCCCCEEEEEeCC
Confidence            99999987       568899999999999999864

>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}

Probab=99.61  E-value=2.3e-14  Score=94.77  Aligned_cols=93  Identities=15%  Similarity=0.145  Sum_probs=62.7

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCe-----------EEEEc-CeEEEEecCCC----CCc--cccCCCcceEEEEEeC---
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGA-----------QLEIA-GSTFLVSNFSN----DSA--AAKNMGIGCVLCLEID---   72 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~-----------~l~~~-~~~l~~~~~~~----~g~--~~~~~~~~~~l~l~v~---   72 (117)
                      ...|.|+  |+++|++||+++++.           .+... +..+++.....    .+.  .....+.+.+++|.|+   
T Consensus        12 ~V~L~V~--Dl~~s~~FY~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~v~~~~   89 (149)
T 4gym_A           12 FVNLPVA--DVAASQAFFGTLGFEFNPKFTDESCACMVVSEQAFVMLIDRARFADFTSKPIADATATTEAIVCVSAIDRD   89 (149)
T ss_dssp             EEEEEES--CHHHHHHHHHHTTCEECGGGCBTTEEEEEEETTEEEEEEEHHHHGGGCSSCBCCTTTCBSCEEEEECSSHH
T ss_pred             EEEEEeC--CHHHHHHHHHHhCCCcceeecCCceeEEeecCcceEeeeccccccccccccCCCCCCCCeeEEEEEeccHH
Confidence            4456777  999999999997661           12222 33333322110    111  1112236678999985   


Q ss_pred             CHHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEecc
Q 044588           73 DVEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        73 dvd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++|+.+++++++|+++        +.+.++|+|||||+|+|...
T Consensus        90 ~vd~~~~~~~~~g~~~~~~p~~~~~~~~~~f~DPDGn~iEi~~~  133 (149)
T 4gym_A           90 DVDRFADTALGAGGTVARDPMDYGFMYGRSFHDLDGHLWEVMWM  133 (149)
T ss_dssp             HHHHHHHHHHHTTCEECSCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHHHHHHHhcCceeeccccccCCEEEEEEEcCCCCEEEEEEE
Confidence            6789999999999988        45788999999999999853

>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}

Probab=99.61  E-value=3.2e-14  Score=93.51  Aligned_cols=95  Identities=21%  Similarity=0.147  Sum_probs=66.5

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE----------------------cC-eEEEEecCCCCC----ccccCCCcceE
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI----------------------AG-STFLVSNFSNDS----AAAKNMGIGCV   66 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~----------------------~~-~~l~~~~~~~~g----~~~~~~~~~~~   66 (117)
                      ...|.|+  |++++++||+++||.++..                      ++ ..+.+.......    .+........+
T Consensus        22 hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~h   99 (156)
T 3kol_A           22 HIALNVQ--DMQASRYFYGTILGLHELTDDEVPATLTELVASGKVANFITPDGTILDLFGEPELSPPDPNPEKTFTRAYH   99 (156)
T ss_dssp             EEEEEES--CHHHHHHHHTTTSCCEECCTTTSCTTTHHHHHTTSEEEEECTTSCEEEEEECTTCCCSSSSTTCCCSSCCE
T ss_pred             EEEEEeC--CHHHHHHHHHhhcCCEEEeecccCcchhcccCCCcEEEEEeCCCCEEEEEecCCCCcCCCCCCCCCCceEE
Confidence            4566777  9999999999999966542                      11 223332211100    00011123468


Q ss_pred             EEEEeC--CHHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEecccC
Q 044588           67 LCLEID--DVEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        67 l~l~v~--dvd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++|.|+  |++++++++.++|+++        +++.++++||+||.|+|++...
T Consensus       100 ~~~~v~~~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  153 (156)
T 3kol_A          100 LAFDIDPQLFDRAVTVIGENKIAIAHGPVTRPTGRGVYFYDPDGFMIEIRCDPE  153 (156)
T ss_dssp             EEEECCGGGHHHHHHHHHHTTCCEEEEEEEC-CCEEEEEECTTSCEEEEEECCC
T ss_pred             EEEEecHHHHHHHHHHHHHCCCccccCceecCCccEEEEECCCCCEEEEEecCC
Confidence            888888  9999999999999987        3578899999999999998754

>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}

Probab=99.61  E-value=6.1e-15  Score=99.06  Aligned_cols=101  Identities=11%  Similarity=0.142  Sum_probs=69.9

Q ss_pred             CCCccee-EEEEecCCCHHHHHHHHHhhhCeEEE-----------EcCeEEEEecCCC-CC----cc-ccCCCcc-eEEE
Q 044588            8 ANFMGMK-PQLLVEESKATNVVQFYKTTSGAQLE-----------IAGSTFLVSNFSN-DS----AA-AKNMGIG-CVLC   68 (117)
Q Consensus         8 ~~~~~~~-p~L~v~~~D~~~a~~FY~~~fG~~l~-----------~~~~~l~~~~~~~-~g----~~-~~~~~~~-~~l~   68 (117)
                      |+..++. ..|.|+  |+++|++||+++||.++.           .++..+.+..... ..    .+ ....+.+ .+++
T Consensus         4 ~~i~~l~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~g~~hi~   81 (160)
T 3r4q_A            4 KPPSAIMETALYAD--DLDAAEAFYRDVFGLEMVLKLPGQLVFFKCGRQMLLLFDPQESSRADANNPIPRHGAVGQGHFC   81 (160)
T ss_dssp             CCCSCEEEEEEECS--CHHHHHHHHHHHSCCEEEEEETTTEEEEEETTEEEEEECHHHHTCCCTTCCSCCCEEEEECEEE
T ss_pred             cccccccEEEEEeC--CHHHHHHHHHHhcCCEEEEecCCcEEEEeCCCEEEEEEecCCccCccccCCCCcCCCcceeEEE
Confidence            3444443 456666  999999999999995443           2333333332110 00    00 0111234 6899


Q ss_pred             EEe---CCHHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEecccC
Q 044588           69 LEI---DDVEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        69 l~v---~dvd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      |.|   +|++++++++.++|+++        |.+.++++||+||.|+|.++..
T Consensus        82 f~V~~~~dld~~~~~l~~~G~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  134 (160)
T 3r4q_A           82 FYADDKAEVDEWKTRFEALEIPVEHYHRWPNGSYSVYIRDPAGNSVEVGEGKL  134 (160)
T ss_dssp             EEESSHHHHHHHHHHHHTTTCCCCEEEECTTSCEEEEEECTTCCEEEEEEGGG
T ss_pred             EEeCCHHHHHHHHHHHHHCCCEEeccccccCCcEEEEEECCCCCEEEEEeCCC
Confidence            999   89999999999999987        5789999999999999998753

>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}

Probab=99.61  E-value=1.1e-14  Score=96.48  Aligned_cols=95  Identities=19%  Similarity=0.203  Sum_probs=68.4

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeE----------EEEcCeEEEEecCCC----CCccccCCCcceEEEEEe---CCHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQ----------LEIAGSTFLVSNFSN----DSAAAKNMGIGCVLCLEI---DDVEA   76 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~----------l~~~~~~l~~~~~~~----~g~~~~~~~~~~~l~l~v---~dvd~   76 (117)
                      ...|.|+  |+++|++||+++||.+          +..++..+.+.....    .+.+........+++|.|   +|+++
T Consensus         8 hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~l~f~v~~~~dv~~   85 (150)
T 3bqx_A            8 VITLGIG--DLEASARFYGEGFGWAPVFRNPEIIFYQMNGFVLATWLVQNLQEDVGVAVTSRPGSMALAHNVRAETEVAP   85 (150)
T ss_dssp             EEEEEES--CHHHHHHHHHHTSCCCCSEECSSEEEEECSSSEEEEEEHHHHHHHHSSCCCSSCCSCEEEEECSSGGGHHH
T ss_pred             EEEEEcC--CHHHHHHHHHHhcCCEeecCCCCEEEEEcCCEEEEEEeccccccccCCCCCCCCCeEEEEEEeCCHHHHHH
Confidence            4566777  9999999999999932          333444555543210    000111122557899998   89999


Q ss_pred             HHHHHHhCCCee---------eceEEEEECCCCCeEEEecccC
Q 044588           77 ALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        77 ~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +++++.++|+++         |.+.++++||+||.|+|.+...
T Consensus        86 ~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  128 (150)
T 3bqx_A           86 LMERLVAAGGQLLRPADAPPHGGLRGYVADPDGHIWEIAFNPV  128 (150)
T ss_dssp             HHHHHHHTTCEEEEEEECCTTSSEEEEEECTTCCEEEEEECTT
T ss_pred             HHHHHHHCCCEEecCCcccCCCCEEEEEECCCCCEEEEEeCCC
Confidence            999999999987         4588899999999999998643

>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A

Probab=99.60  E-value=4.7e-14  Score=90.79  Aligned_cols=98  Identities=17%  Similarity=0.193  Sum_probs=63.6

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc-----C-eEE-EEecCC----C-------CCccccCCCcc-eEEEEEeCCH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA-----G-STF-LVSNFS----N-------DSAAAKNMGIG-CVLCLEIDDV   74 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-----~-~~l-~~~~~~----~-------~g~~~~~~~~~-~~l~l~v~dv   74 (117)
                      ...|.++  |++++++||+++||.++...     + ..+ .+....    .       .+......+.+ .+++|.|+|+
T Consensus         5 hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~v~d~   82 (135)
T 1f9z_A            5 HTMLRVG--DLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNA   82 (135)
T ss_dssp             EEEEECS--CHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSCH
T ss_pred             EEEEEeC--CHHHHHHHHHhccCcEEEEecccCCCceEEEEEecCCCCCCcEEEEEEcCCCCcccCCCCccEEEEEeCCH
Confidence            3456677  99999999999999554321     1 112 121110    0       00001112234 4799999999


Q ss_pred             HHHHHHHHhCCCee---------ec-eEEEEECCCCCeEEEecccCCCC
Q 044588           75 EAALAKAMSGGVWA---------TG-RVGKVKDPCGFTWLIYSPVKKCA  113 (117)
Q Consensus        75 d~~~~~~~~~G~~v---------g~-r~~~v~DP~G~~w~l~~~~~~~~  113 (117)
                      +++++++.++|+++         |. +.++++||+||.|+|.++....+
T Consensus        83 ~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~~DPdG~~iel~~~~~~~~  131 (135)
T 1f9z_A           83 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR  131 (135)
T ss_dssp             HHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-----
T ss_pred             HHHHHHHHHCCCEEecCCccCCCCceeEEEEECCCCCEEEEEecCCCCC
Confidence            99999999999987         33 57899999999999999876544

>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*

Probab=99.60  E-value=2e-14  Score=93.77  Aligned_cols=92  Identities=21%  Similarity=0.313  Sum_probs=67.2

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeE------------EEE-cCeEEEEecCC------CCCccccCCCcceEEEEEeC--
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQ------------LEI-AGSTFLVSNFS------NDSAAAKNMGIGCVLCLEID--   72 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~------------l~~-~~~~l~~~~~~------~~g~~~~~~~~~~~l~l~v~--   72 (117)
                      ...|.|+  |+++|++||++ ||.+            +.. ++..+.+....      + .......+...+++|.|+  
T Consensus         7 hv~l~v~--D~~~a~~FY~~-LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~~~l~f~v~~~   82 (138)
T 2a4x_A            7 LFAVVVE--DMAKSLEFYRK-LGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDP-EWQAPTGGHRFAIAFEFPDT   82 (138)
T ss_dssp             EEEEEES--CHHHHHHHHHT-TTCCCCGGGGGCSEEEEECTTSCEEEEEEHHHHHHHCT-TCCCCBSSCSEEEEEECSSH
T ss_pred             EEEEEEC--CHHHHHHHHHH-cCCcEEecCCCCceEEEEcCCCeEEEEecCccchhhCc-ccCCCCCCCeEEEEEEeCCH
Confidence            5677788  99999999998 9932            333 33345544310      1 000111225578999999  


Q ss_pred             -CHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           73 -DVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        73 -dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                       |++++++++.++|+++         |.+.++++||+||.|+|.+..
T Consensus        83 ~dv~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  129 (138)
T 2a4x_A           83 ASVDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  129 (138)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEECTTCCEEEEEEEC
T ss_pred             HHHHHHHHHHHHCCCceeeCCcccCCCcEEEEEECCCCCEEEEEeCC
Confidence             9999999999999987         457899999999999999876

>3rmu_A Methylmalonyl-COA epimerase, mitochondrial; structural genomics consortium, SGC, vitamin B12, mitochondr isomerase; HET: PG4; 1.80A {Homo sapiens} SCOP: d.32.1.0

Probab=99.59  E-value=3.4e-14  Score=90.72  Aligned_cols=90  Identities=19%  Similarity=0.235  Sum_probs=61.2

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE----------------EcCeEEEEecCCCCCccc------cCCCcceEEEEEeCC
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE----------------IAGSTFLVSNFSNDSAAA------KNMGIGCVLCLEIDD   73 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~----------------~~~~~l~~~~~~~~g~~~------~~~~~~~~l~l~v~d   73 (117)
                      .|.|+  |++++++||+++||.++.                .++..+.+........+.      ...+...+++|.|+|
T Consensus        10 ~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~hi~~~v~d   87 (134)
T 3rmu_A           10 AIAVP--DLEKAAAFYKNILGAQVSEAVPLPEHGVSVVFVNLGNTKMELLHPLGLDSPIAGFLQKNKAGGMHHICIEVDN   87 (134)
T ss_dssp             EEECS--CHHHHHHHHHHTSCCEECCCEEEGGGTEEEEEEECSSSEEEEEEECSTTCTTHHHHHHCTTCEEEEEEEEESC
T ss_pred             EEEeC--CHHHHHHHHHHhcCCEEeEeeecCCCCEEEEEEecCCEEEEEEecCCCCchhhhhhhccCCCCceEEEEEcCC
Confidence            44555  999999999999994432                223333332211101110      112234799999999


Q ss_pred             HHHHHHHHHhCCCee----------eceEEEE--ECCCCCeEEEec
Q 044588           74 VEAALAKAMSGGVWA----------TGRVGKV--KDPCGFTWLIYS  107 (117)
Q Consensus        74 vd~~~~~~~~~G~~v----------g~r~~~v--~DP~G~~w~l~~  107 (117)
                      ++++++++.++|+++          |.+..++  +||+||.|+|++
T Consensus        88 ~~~~~~~l~~~G~~~~~~~~~~~~~g~~~~~~~~~DPdG~~iel~e  133 (134)
T 3rmu_A           88 INAAVMDLKKKKIRSLSEEVKIGAHGKPVIFLHPKDCGGVLVELEQ  133 (134)
T ss_dssp             HHHHHHHHHHTTCTTBCCCCEECTTSSEEEEECSCSSCCSCEEEEE
T ss_pred             HHHHHHHHHHcCCcccCCCcccCCCCceEEEEecCCCCcEEEEEEc
Confidence            999999999999886          3446666  899999999986

>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A

Probab=99.59  E-value=5.3e-14  Score=93.00  Aligned_cols=95  Identities=15%  Similarity=0.183  Sum_probs=64.6

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEE----------EEcCeEEEEecCCCC-Cc-cccCCCcceEEEEEeC-CHHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQL----------EIAGSTFLVSNFSND-SA-AAKNMGIGCVLCLEID-DVEAALAKA   81 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l----------~~~~~~l~~~~~~~~-g~-~~~~~~~~~~l~l~v~-dvd~~~~~~   81 (117)
                      ..|.|.  |++++++||+++||.++          ..++..+.+...... .. .........+++|.++ |++++++++
T Consensus        27 v~l~v~--D~~~a~~FY~~vLG~~~~~~~~~~~~l~~~~~~l~l~~~~~~~~~~~~~~~~g~~hi~f~~~~dl~~~~~~l  104 (152)
T 3huh_A           27 LVLTVS--DISTTIRFYEEVLGFSAVTFKQNRKALIFGAQKINLHQQEMEFEPKASRPTPGSADLCFITSTPINDVVSEI  104 (152)
T ss_dssp             EEEEES--CHHHHHHHHHHTTCCEEEEETTTEEEEEETTEEEEEEETTBCCSSCCSSCCTTCCEEEEEESSCHHHHHHHH
T ss_pred             EEEEeC--CHHHHHHHHHhcCCCEEEEccCCeEEEEeCCeEEEEeccCCcCCCcCcCCCCCccEEEEEecCCHHHHHHHH
Confidence            445566  99999999999999443          344544544432110 00 1111113457777776 999999999


Q ss_pred             HhCCCee--------e----ceEEEEECCCCCeEEEecccCC
Q 044588           82 MSGGVWA--------T----GRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        82 ~~~G~~v--------g----~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      .++|+++        +    .+.++++||+||.|+|++..++
T Consensus       105 ~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdG~~iEl~~~~~~  146 (152)
T 3huh_A          105 LQAGISIVEGPVERTGATGEIMSIYIRDPDGNLIEISQYVEG  146 (152)
T ss_dssp             HHTTCCCSEEEEEEEETTEEEEEEEEECTTCCEEEEEEC---
T ss_pred             HHCCCeEecCCccccCCCCcEEEEEEECCCCCEEEEEecccC
Confidence            9999986        1    2778999999999999988754

>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}

Probab=99.59  E-value=2.2e-14  Score=92.89  Aligned_cols=97  Identities=10%  Similarity=0.025  Sum_probs=62.6

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEE----------EEcCeEEEEecCCCCCccccCCCcceEEEEEe-CCHHHHHHHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQL----------EIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEI-DDVEAALAKAM   82 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l----------~~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v-~dvd~~~~~~~   82 (117)
                      ...|.|+  |++++++||+++||.++          ...+..+.+........+...+...+.+.+.+ +|++++++++.
T Consensus        12 hv~l~v~--Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~h~~~~~~~~~d~~~~~~~l~   89 (135)
T 3rri_A           12 HLAIPAR--DLDEAYDFYVTKLGCKLARRYPDRITLDFFGDQLVCHLSDRWDREVSMYPRHFGITFRDKKHFDNLYKLAK   89 (135)
T ss_dssp             EEEEEES--CHHHHHHHHTTTTCCEEEEEETTEEEEEETTEEEEEEECSCSCSSCCSSSCEEEEECSSHHHHHHHHHHHH
T ss_pred             eEEEEcC--CHHHHHHHHHHhcCCEeeccCCCcEEEEEeCCEEEEEEcCcccccCCCCCCeEEEEEcChHhHHHHHHHHH
Confidence            3455666  99999999999999443          22333333322111111111111333344434 57999999999


Q ss_pred             hCCCee-------------eceEEEEECCCCCeEEEecccCCC
Q 044588           83 SGGVWA-------------TGRVGKVKDPCGFTWLIYSPVKKC  112 (117)
Q Consensus        83 ~~G~~v-------------g~r~~~v~DP~G~~w~l~~~~~~~  112 (117)
                      ++|+++             +.+.++++||+||.|+|.+...+.
T Consensus        90 ~~G~~~~~~p~~~~~~~~~~~~~~~~~DPdGn~iel~~~~~~~  132 (135)
T 3rri_A           90 QRGIPFYHDLSRRFEGLIEEHETFFLIDPSNNLLEFKYYFDDR  132 (135)
T ss_dssp             HTTCCEEEEEEEESTTSTTCEEEEEEECTTCCEEEEEEESSGG
T ss_pred             HcCCceecCcccccCCCCCceEEEEEECCCCCEEEEEEECChh
Confidence            999976             126789999999999999876543

>1ss4_A Glyoxalase family protein; structural genomics, PSI, prote structure initiative, midwest center for structural genomic unknown function; HET: CIT GSH; 1.84A {Bacillus cereus} SCOP: d.32.1.6

Probab=99.59  E-value=4.1e-14  Score=92.84  Aligned_cols=48  Identities=10%  Similarity=0.218  Sum_probs=42.9

Q ss_pred             cce-EEEEEeCCHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecccC
Q 044588           63 IGC-VLCLEIDDVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        63 ~~~-~l~l~v~dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      .++ +|+|.|+|++++++++.++|+++         |.+.++++||+||.|+|.++..
T Consensus        94 ~g~~hl~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  151 (153)
T 1ss4_A           94 LGYLRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEELG  151 (153)
T ss_dssp             BEEEEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEECC
T ss_pred             CceEEEEEEeCCHHHHHHHHHHCCCeecCCCcccCCceEEEEEECCCCCEEEEEeccC
Confidence            456 89999999999999999999987         4578899999999999998765

>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}

Probab=99.58  E-value=5.1e-14  Score=93.68  Aligned_cols=95  Identities=14%  Similarity=0.157  Sum_probs=67.8

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc--CeEEEEe-cCCC--------CCc-c---ccCCCcceEEEEEeCCHHHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA--GSTFLVS-NFSN--------DSA-A---AKNMGIGCVLCLEIDDVEAAL   78 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~--~~~l~~~-~~~~--------~g~-~---~~~~~~~~~l~l~v~dvd~~~   78 (117)
                      ...|.|+  |++++++||+++||.++...  +....+. ....        .+. .   ..+...+++++|.|+|+++++
T Consensus        28 hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~l~f~v~dld~~~  105 (148)
T 2r6u_A           28 HFEIPFD--DGDRARAFYRDAFGWAIAEIPDMDYSMVTTGPVGESGMPDEPGYINGGMMQRGEVTTPVVTVDVESIESAL  105 (148)
T ss_dssp             EEEEEES--SHHHHHHHHHHHHCCEEEEETTTTEEEEECSCBCTTSSBCSSSCBCEEEEESSSSCSCEEEEECSCHHHHH
T ss_pred             EEEEEeC--CHHHHHHHHHHccCcEEEECCCCCEEEEEeCCcceeecccCCcccccceeecCCCCeEEEEEEcCCHHHHH
Confidence            4566777  99999999999999766542  2222222 1110        000 0   011115679999999999999


Q ss_pred             HHHHhCCCee--------e-ceEEEEECCCCCeEEEecccC
Q 044588           79 AKAMSGGVWA--------T-GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        79 ~~~~~~G~~v--------g-~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +++.++|+++        + ++.++++||+||.|+|.++.+
T Consensus       106 ~~l~~~G~~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~  146 (148)
T 2r6u_A          106 ERIESLGGKTVTGRTPVGNMGFAAYFTDSEGNVVGLWETAR  146 (148)
T ss_dssp             HHHHHTTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEECC
T ss_pred             HHHHHcCCeEecCCeecCCCEEEEEEECCCCCEEEEEecCC
Confidence            9999999987        1 478899999999999998754

>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}

Probab=99.57  E-value=8.9e-14  Score=88.59  Aligned_cols=91  Identities=19%  Similarity=0.185  Sum_probs=62.8

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE----------------c-CeEEEEecCCCCCccccCCCcc-eEEEEEeCC--
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI----------------A-GSTFLVSNFSNDSAAAKNMGIG-CVLCLEIDD--   73 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~----------------~-~~~l~~~~~~~~g~~~~~~~~~-~~l~l~v~d--   73 (117)
                      ...|.|+  |++++++||+++||.++..                + +..+.+.............+.+ .+++|.|+|  
T Consensus         6 hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~g~~hi~~~v~d~~   83 (127)
T 3e5d_A            6 HVALWTT--NLEQMKQFYVTYFGATANDLYENKTKGFNSYFLSFEDGARLEIMSRTDVTGKTTGENLGWAHIAISTGTKE   83 (127)
T ss_dssp             EEEEECS--SHHHHHHHHHHHHCCEECCCEEEGGGTEEEEEEECSSSCEEEEEEETTCCCCCCSSCSSCCCEEEECSSHH
T ss_pred             EEEEEEC--CHHHHHHHHHHhcCCeeecccccCCCCccEEEEEcCCCcEEEEEecCCCCCCCCcCCCceEEEEEEcCCHH
Confidence            3456677  9999999999999944321                1 2223332211100001111233 789999998  


Q ss_pred             -HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEe
Q 044588           74 -VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIY  106 (117)
Q Consensus        74 -vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~  106 (117)
                       +++++++++++|+++         |.+.++++||+||.|+|.
T Consensus        84 ~v~~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~  126 (127)
T 3e5d_A           84 AVDELTEKLRQDGFAIAGEPRMTGDGYYESVVLDPEGNRIEIT  126 (127)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             HHHHHHHHHHHcCCeEecCcccCCCCcEEEEEECCCCCEEEEe
Confidence             889999999999988         457889999999999986

>2zw5_A Bleomycin acetyltransferase; dimer, two domains; HET: COA; 2.40A {Streptomyces verticillus} PDB: 2zw4_A* 2zw6_A 2zw7_A*

Probab=99.57  E-value=5.1e-14  Score=101.72  Aligned_cols=96  Identities=15%  Similarity=0.161  Sum_probs=70.1

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhCeEEE--EcC-eEEE-EecCC----CCCc--ccc--CCCcceEEEEEeC-CHHHH
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSGAQLE--IAG-STFL-VSNFS----NDSA--AAK--NMGIGCVLCLEID-DVEAA   77 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~--~~~-~~l~-~~~~~----~~g~--~~~--~~~~~~~l~l~v~-dvd~~   77 (117)
                      ..+.+.|.|+  |+++|++||+++||.++.  ..+ +.+. +....    +...  ..+  ..+..+.++|.|+ |+|++
T Consensus       183 ~~~~~~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~dvd~~  260 (301)
T 2zw5_A          183 LAVITELPVR--DVAATLRLVEAALGARTAFAIGDPPEFAEAALTPWSAGPRFRLAAVPGPGPVEPVRLHLDAAGTADSL  260 (301)
T ss_dssp             EEEEEEEEES--CHHHHHHHHHHHSCCEEEEEEETTEEEEEEESSSSSSSSEEEEEECCCSSCCCCCEEEEEEESCHHHH
T ss_pred             ceeEEEEEeC--CHHHHHHHHHHhcCCeEeeecCCCccEEEEEcCCCccccccccccCCCcCCCCceEEEEEcCccHHHH
Confidence            4567888898  999999999999997765  222 2322 22111    1000  111  1124578999999 99999


Q ss_pred             HHHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           78 LAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        78 ~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +++++++|+++         |.+.++|+||+||.|+|+++
T Consensus       261 ~~~~~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~~~~~~~  300 (301)
T 2zw5_A          261 HRRAVDAGARVDGPPVRRPWGRSEFVITLPEGHELTVSAP  300 (301)
T ss_dssp             HHHHHHTTCCEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred             HHHHHHcCCccccCcccCCCcceEEEEECCCCCEEEeeCC
Confidence            99999999987         46899999999999999975

>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}

Probab=99.57  E-value=1.1e-13  Score=91.47  Aligned_cols=98  Identities=12%  Similarity=0.092  Sum_probs=65.3

Q ss_pred             CCCcce-eEEEEecCCCHHHHHHHHHhhhCeEE----------EEcCeEEEEecCCC-CCccc-cCCCcceEEEEEeC-C
Q 044588            8 ANFMGM-KPQLLVEESKATNVVQFYKTTSGAQL----------EIAGSTFLVSNFSN-DSAAA-KNMGIGCVLCLEID-D   73 (117)
Q Consensus         8 ~~~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l----------~~~~~~l~~~~~~~-~g~~~-~~~~~~~~l~l~v~-d   73 (117)
                      |..+++ ...|.|+  |++++++||+++||.++          .+++..+.+..... ..... .......++++.++ |
T Consensus        23 m~i~~i~hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~l~~g~~~l~l~~~~~~~~~~~~~~~~g~~~~~~~~~~d  100 (147)
T 3zw5_A           23 MLIRRLDHIVMTVK--SIKDTTMFYSKILGMEVMTFKEDRKALCFGDQKFNLHEVGKEFEPKAAHPVPGSLDICLITEVP  100 (147)
T ss_dssp             TSCEEEEEEEEEES--CHHHHHHHHHHHHCCEEEEETTTEEEEEETTEEEEEEETTSCCSSCCSSCCTTCCEEEEECSSC
T ss_pred             eecccccEEEEEeC--CHHHHHHHHHHhcCCEEEecCCCceEEEECCcEEEEEEcCCCcCcccCCCCCCCceEEEEeccC
Confidence            334444 4566777  99999999999999443          34444444433211 11111 11113356677675 9


Q ss_pred             HHHHHHHHHhCCCee--------e----ceEEEEECCCCCeEEEec
Q 044588           74 VEAALAKAMSGGVWA--------T----GRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        74 vd~~~~~~~~~G~~v--------g----~r~~~v~DP~G~~w~l~~  107 (117)
                      ++++++++.++|+++        +    .+.++++||+||.|+|++
T Consensus       101 l~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~DPdGn~iEl~~  146 (147)
T 3zw5_A          101 LEEMIQHLKACDVPIEEGPVPRTGAKGPIMSIYFRDPDRNLIEVSN  146 (147)
T ss_dssp             HHHHHHHHHHTTCCCCEEEEEEEETTEEEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHHHcCCceeeCcccccCCCCceEEEEEECCCCCEEEEec
Confidence            999999999999977        1    246899999999999985

>1npb_A Fosfomycin-resistance protein; manganese binding, potassium binding loop, transferase; 2.50A {Serratia marcescens} SCOP: d.32.1.2

Probab=99.56  E-value=1.1e-13  Score=90.60  Aligned_cols=93  Identities=16%  Similarity=0.081  Sum_probs=66.2

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEE----------EEcCeEEEEecCCCCCccccCCCcceEEEEEeC--CHHHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQL----------EIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEID--DVEAALAKAM   82 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l----------~~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~--dvd~~~~~~~   82 (117)
                      ..|.|+  |++++++||+++||.++          ..++..+.+.................+++|.|+  |++++++++.
T Consensus         8 v~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~hi~~~v~~~d~~~~~~~l~   85 (141)
T 1npb_A            8 LTLAVS--DLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFEPLSQRLE   85 (141)
T ss_dssp             EEEEES--CHHHHHHHHHTTSCCEEEEEETTEEEEEETTEEEEEEECTTCCCCCGGGSCSCEEEEECCHHHHHHHHHHHH
T ss_pred             EEEEeC--CHHHHHHHHHhccCCEEEeecCCcEEEEECCEEEEEEECCCCCCCCCCCCCceEEEEEeCHHHHHHHHHHHH
Confidence            456666  99999999999999544          233444544432110000111123468888886  9999999999


Q ss_pred             hCCCee------eceEEEEECCCCCeEEEeccc
Q 044588           83 SGGVWA------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        83 ~~G~~v------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++|+++      +.+.++++||+||.|+|.+..
T Consensus        86 ~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  118 (141)
T 1npb_A           86 QAGVTIWKQNKSEGASFYFLDPDGHKLELHVGS  118 (141)
T ss_dssp             HTTCCEEECCCSSSEEEEEECTTCCEEEEEECC
T ss_pred             HCCCeEeccCCCceeEEEEECCCCCEEEEEECc
Confidence            999987      468899999999999999864

>3oa4_A Glyoxalase, BH1468 protein; structural genomics, protein structure initiative, glyoxalas PSI-biology, lyase; 1.94A {Bacillus halodurans}

Probab=99.56  E-value=3.6e-14  Score=95.23  Aligned_cols=98  Identities=14%  Similarity=0.244  Sum_probs=66.5

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEE----------------EcCeEEEEecCCCCCccc----cCCCcce-EEEEEeCC
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLE----------------IAGSTFLVSNFSNDSAAA----KNMGIGC-VLCLEIDD   73 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~----------------~~~~~l~~~~~~~~g~~~----~~~~~~~-~l~l~v~d   73 (117)
                      ..|.|+  |+++|++||+++||.++.                .++..+.+........+.    ...+.++ +|+|.|+|
T Consensus        12 v~l~V~--Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~g~~Hiaf~V~D   89 (161)
T 3oa4_A           12 IGIAVT--SIKDVLPFYVGSLKLKLLGMEDLPSQGVKIAFLEIGESKIELLEPLSEESPIAKFIQKRGEGIHHIAIGVKS   89 (161)
T ss_dssp             EEEECS--CHHHHHHHHHHTSCCEEEEEEEEGGGTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHCSEEEEEEEECSC
T ss_pred             EEEEEC--CHHHHHHHHHHccCCeEeeeeccCCCCeEEEEEeCCCeEEEEEeECCCCChHHHHhhcCCCCeEEEEEEECC
Confidence            345555  999999999999994432                122233332221101100    0112344 69999999


Q ss_pred             HHHHHHHHHhCCCee----------eceEEEE--ECCCCCeEEEecccCCCCc
Q 044588           74 VEAALAKAMSGGVWA----------TGRVGKV--KDPCGFTWLIYSPVKKCAD  114 (117)
Q Consensus        74 vd~~~~~~~~~G~~v----------g~r~~~v--~DP~G~~w~l~~~~~~~~~  114 (117)
                      ++++++++.++|+++          |.+++++  +||+||.|+|+++.+.+.+
T Consensus        90 id~~~~~l~~~G~~~~~~~~~~~~~g~~~~f~~~~DPdG~~iEl~~~~~~~~~  142 (161)
T 3oa4_A           90 IEERIQEVKENGVQMINDEPVPGARGAQVAFLHPRSARGVLYEFCEKKEQAEN  142 (161)
T ss_dssp             HHHHHHHHHHTTCCBSCSSCEECGGGCEEEEBCGGGTTTCCEEEEECCCCCCC
T ss_pred             HHHHHHHHHHCCCEecccCcccCCCCcEEEEEeccCCCeEEEEEEecCCcccc
Confidence            999999999999987          3456677  4999999999998876554

>3bt3_A Glyoxalase-related enzyme, ARAC type; VOC superfamily, PSI-2, NYSGXRC, structural genomics, prote structure initiative; 2.50A {Clostridium phytofermentans}

Probab=99.56  E-value=3.3e-14  Score=93.99  Aligned_cols=94  Identities=11%  Similarity=0.066  Sum_probs=64.6

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEE---EEc--CeEE-----EEecCCCCCccccCCCcceEE--------EE-EeCCH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQL---EIA--GSTF-----LVSNFSNDSAAAKNMGIGCVL--------CL-EIDDV   74 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l---~~~--~~~l-----~~~~~~~~g~~~~~~~~~~~l--------~l-~v~dv   74 (117)
                      .+.|.|+  |+++|++||+++||.++   ...  +..+     .+....+........+.++.+        ++ .|+|+
T Consensus        24 hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~g~~l~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~dv  101 (148)
T 3bt3_A           24 GPVYFTK--DMDKTVKWFEEILGWSGDIVARDDEGFGDYGCVFDYPSEVAVAHLTPFRGFHLFKGEPIKGVAGFMMIEGI  101 (148)
T ss_dssp             CCEEEES--CHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEEESSCTTTTSCC--CCCSEEEEESCCCSSEEEEEEEECH
T ss_pred             eEEEEEC--CHHHHHHHHHhccCCEEEeeeecCCCccEEccEEEEeccCCCcccccccccceeeccCCCccEEEEEcCCH
Confidence            5678888  99999999999999776   222  2222     110110100000011234444        54 89999


Q ss_pred             HHHHHHHHhCCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           75 EAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        75 d~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +++++++.++|+++         |.+.++++||+||.|+|.++.
T Consensus       102 d~~~~~l~~~G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~  145 (148)
T 3bt3_A          102 DALHKYVKENGWDQISDIYTQPWGARECSITTTDGCILRFFESI  145 (148)
T ss_dssp             HHHHHHHHHTTCCCBCCCEEETTTEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHHHHHHHcCCccccCcccCCCccEEEEEECCCCCEEEEeeec
Confidence            99999999999876         457899999999999999875

>2kjz_A ATC0852; protein of unknown function, dimer, structural genomics, PSI protein structure initiative; NMR {Agrobacterium tumefaciens}

Probab=99.56  E-value=7.8e-14  Score=92.31  Aligned_cols=94  Identities=22%  Similarity=0.265  Sum_probs=66.6

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeE----------EEEc-CeEEEEecCCCCCccccCCCcceEEEEEeC---CHHHHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQ----------LEIA-GSTFLVSNFSNDSAAAKNMGIGCVLCLEID---DVEAALA   79 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~----------l~~~-~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~---dvd~~~~   79 (117)
                      ...|.|+  |++++++||+++||.+          +..+ +..|.+.............+...+++|.|+   |++++++
T Consensus        28 hv~l~v~--Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~hl~f~v~d~~dv~~~~~  105 (144)
T 2kjz_A           28 FTILYVD--NPPASTQFYKALLGVDPVESSPTFSLFVLANGMKLGLWSRHTVEPKASVTGGGGELAFRVENDAQVDETFA  105 (144)
T ss_dssp             EEEEEES--CHHHHHHHHHHHHTCCCSEEETTEEEEECTTSCEEEEEETTSCSSCCCCSSSSCEEEEECSSHHHHHHHHH
T ss_pred             EEEEEeC--CHHHHHHHHHHccCCEeccCCCCeEEEEcCCCcEEEEEeCCCCCCccCCCCCceEEEEEeCCHHHHHHHHH
Confidence            5677788  9999999999999932          3333 234444332111110111225579999997   5899999


Q ss_pred             HHHhCCCee--------eceEEEEECCCCCeEEEeccc
Q 044588           80 KAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        80 ~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++.++|+++        +++.++++||+||.|+|.++.
T Consensus       106 ~l~~~G~~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~  143 (144)
T 2kjz_A          106 GWKASGVAMLQQPAKMEFGYTFTAADPDSHRLRVYAFA  143 (144)
T ss_dssp             HHHHTTCCCCSCCEEETTEEEEEECCTTCCEEEEEEEC
T ss_pred             HHHHCCCeEecCceecCCceEEEEECCCCCEEEEEecC
Confidence            999999887        237889999999999999753

>3hdp_A Glyoxalase-I; glutathione,lyase, methylglyoxal,11003P,PSI2, structural GENOMIC,NYSGXRC., structural genomics; 2.06A {Clostridium acetobutylicum} PDB: 2qh0_A

Probab=99.56  E-value=9.9e-14  Score=89.45  Aligned_cols=92  Identities=12%  Similarity=0.095  Sum_probs=63.3

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEE-----------------EcCeEEEEecCCCCCccc---cCCCcce-EEEEEeC
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLE-----------------IAGSTFLVSNFSNDSAAA---KNMGIGC-VLCLEID   72 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~-----------------~~~~~l~~~~~~~~g~~~---~~~~~~~-~l~l~v~   72 (117)
                      ...|.|+  |+++|++||+ +||.++.                 .++..+.+........+.   ...+.++ +++|.|+
T Consensus        10 hv~i~v~--Dl~~a~~FY~-~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~g~~hiaf~v~   86 (133)
T 3hdp_A           10 HIGYAVK--NIDSALKKFK-RLGYVEESEVVRDEVRKVYIQFVINGGYRVELVAPDGEDSPINKTIKKGSTPYHICYEVE   86 (133)
T ss_dssp             EEEEECS--CHHHHHHHHH-HTTCEECSCCEEETTTTEEEEEEEETTEEEEEEEESSTTCTHHHHTTTSCEEEEEEEEES
T ss_pred             EEEEEEC--CHHHHHHHHH-HcCCeeecceeccCCcceEEEEEeCCCEEEEEEecCCCCChHHHHHhcCCceEEEEEEcC
Confidence            3455566  9999999999 9994431                 122333333221100100   0013566 9999999


Q ss_pred             CHHHHHHHHHhCCCee-----------eceEEEEECCCCCeEEEecc
Q 044588           73 DVEAALAKAMSGGVWA-----------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        73 dvd~~~~~~~~~G~~v-----------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      |++++++++.++|+++           |.+.++++||+||.|+|++.
T Consensus        87 di~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~dPdG~~iEl~e~  133 (133)
T 3hdp_A           87 DIQKSIEEMSQIGYTLFKKAEIAPAIDNRKVAFLFSTDIGLIELLEK  133 (133)
T ss_dssp             CHHHHHHHHTTTTEEEEEEEEEEGGGTTEEEEEEEETTTEEEEEEEC
T ss_pred             CHHHHHHHHHHcCCccccCCeecccCCCceEEEEECCCceEEEEecC
Confidence            9999999999999876           34788999999999999863

>1nki_A Probable fosfomycin resistance protein; potassium binding loop, manganese binding, transferase; 0.95A {Pseudomonas aeruginosa} SCOP: d.32.1.2 PDB: 1lqo_A 1lqk_A 1lqp_A 1nnr_A

Probab=99.55  E-value=2.2e-13  Score=88.47  Aligned_cols=91  Identities=19%  Similarity=0.113  Sum_probs=65.2

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEE----------EcCeEEEEecCCCCCccccCCCcceEEEEEeC--CHHHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLE----------IAGSTFLVSNFSNDSAAAKNMGIGCVLCLEID--DVEAALAKAM   82 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~----------~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~--dvd~~~~~~~   82 (117)
                      ..|.++  |++++.+||+++||.++.          .++..+.+....  ..+ ...+...+++|.|+  |++++++++.
T Consensus         8 v~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~l~l~~~~--~~~-~~~~~~~h~~~~v~~~d~~~~~~~l~   82 (135)
T 1nki_A            8 LTLAVA--DLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREP--QYG-GPAADYTHYAFGIAAADFARFAAQLR   82 (135)
T ss_dssp             EEEEES--CHHHHHHHHHHTTCCEEEEEETTEEEEEETTEEEEEEECT--TCC-CCCSSSCEEEEEECHHHHHHHHHHHH
T ss_pred             EEEEeC--CHHHHHHHHHHhcCCEEEEcCCCceEEecCCEEEEEEeCC--CCC-CCCCCcceEEEEccHHHHHHHHHHHH
Confidence            345666  999999999999995543          233344443321  101 11113457777776  9999999999


Q ss_pred             hCCCee------eceEEEEECCCCCeEEEecccC
Q 044588           83 SGGVWA------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        83 ~~G~~v------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++|+++      +.+.++++||+||.|+|.+...
T Consensus        83 ~~G~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  116 (135)
T 1nki_A           83 AHGVREWKQNRSEGDSFYFLDPDGHRLEAHVGDL  116 (135)
T ss_dssp             HTTCCEEECCCSSSCEEEEECTTCCEEEEESCCH
T ss_pred             HCCCceecCCCCCeEEEEEECCCCCEEEEEECCc
Confidence            999988      4688999999999999998653

>2c21_A Trypanothione-dependent glyoxalase I; lyase, glutathionylspermidine, methylglyoxal, detoxification; 2.0A {Leishmania major} SCOP: d.32.1.1

Probab=99.55  E-value=1.5e-13  Score=90.21  Aligned_cols=98  Identities=14%  Similarity=0.131  Sum_probs=65.2

Q ss_pred             Ccce-eEEEEecCCCHHHHHHHHHhhhCeEEEEc------CeE-EEEecCC----C-------CCccccCCCcc-eEEEE
Q 044588           10 FMGM-KPQLLVEESKATNVVQFYKTTSGAQLEIA------GST-FLVSNFS----N-------DSAAAKNMGIG-CVLCL   69 (117)
Q Consensus        10 ~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l~~~------~~~-l~~~~~~----~-------~g~~~~~~~~~-~~l~l   69 (117)
                      .+++ ...|.|+  |++++++||+++||.++...      +.. ..+....    .       ........+.+ .+++|
T Consensus         6 ~~~i~hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~~~h~~f   83 (144)
T 2c21_A            6 SRRMLHTMIRVG--DLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAI   83 (144)
T ss_dssp             CCEEEEEEEECS--CHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEE
T ss_pred             cceeEEEEEEeC--CHHHHHHHHHhcCCCEEEEeeecCCCCeEEEEEEcCCCCCceEEEEEecCCCCCCCCCCCceEEEE
Confidence            3444 4456666  99999999999999554321      111 1111110    0       00001111233 68999


Q ss_pred             EeCCHHHHHHHHHhCCCee----eceEE-EEECCCCCeEEEeccc
Q 044588           70 EIDDVEAALAKAMSGGVWA----TGRVG-KVKDPCGFTWLIYSPV  109 (117)
Q Consensus        70 ~v~dvd~~~~~~~~~G~~v----g~r~~-~v~DP~G~~w~l~~~~  109 (117)
                      .|+|++++++++.++|+++    |.++. +++||+||.|+|.++.
T Consensus        84 ~v~d~~~~~~~l~~~G~~~~~~~g~~~~~~~~DPdG~~iel~~~~  128 (144)
T 2c21_A           84 GVEDVKELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNEK  128 (144)
T ss_dssp             EESCHHHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEHH
T ss_pred             EeCCHHHHHHHHHHCCCEEeccCCcEEEEEEECCCCCEEEEEEcC
Confidence            9999999999999999987    45554 9999999999999864

>2qnt_A AGR_C_3434P, uncharacterized protein ATU1872; glyoxalase/bleomycin resistance protein/dioxygenase family R protein, PSI-2, MCSG; HET: MSE EPE; 1.40A {Agrobacterium tumefaciens str}

Probab=99.55  E-value=2.1e-14  Score=93.67  Aligned_cols=94  Identities=23%  Similarity=0.222  Sum_probs=65.7

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCCC-C-------------Ccc-ccCCCcceEEEEEeCCHHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFSN-D-------------SAA-AKNMGIGCVLCLEIDDVEAA   77 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~~-~-------------g~~-~~~~~~~~~l~l~v~dvd~~   77 (117)
                      .+.|.|+  |++++++||+++||.++... +..+.+..... .             +.. ....+...+++|.|+|++++
T Consensus        11 ~v~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dv~~~   88 (141)
T 2qnt_A           11 NPIPFVR--DINRSKSFYRDRLGLKILEDFGSFVLFETGFAIHEGRSLEETIWRTSSDAQEAYGRRNMLLYFEHADVDAA   88 (141)
T ss_dssp             CCCCEES--CHHHHHHHHHHTTCCCEEEECSSEEEETTSCEEEEHHHHHHHHHSCCC--CCCSCCSSCEEEEEESCHHHH
T ss_pred             eEEEEEC--CHHHHHHHHHHhcCCEEEEEcCCcEEEeccceeccCchhhhhccccCCccccccCCCceEEEEEeCcHHHH
Confidence            5667888  99999999999999655432 22222211000 0             000 11122567999999999999


Q ss_pred             HHHHHhCCCee---------eceEEEEECCCCCeEEEecccC
Q 044588           78 LAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        78 ~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++++.+ |+++         |.+.++++||+||.|+|.++..
T Consensus        89 ~~~l~~-G~~~~~~~~~~~~g~~~~~~~DPdG~~iel~~~~~  129 (141)
T 2qnt_A           89 FQDIAP-HVELIHPLERQAWGQRVFRFYDPDGHAIEVGESLS  129 (141)
T ss_dssp             HC-CGG-GSCEEEEEEECTTSCEEEEEECTTCCEEEEEECC-
T ss_pred             HHHHHc-CCccccCCccCCCCCEEEEEECCCCCEEEEEecch
Confidence            999999 9886         4588999999999999998764

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.54  E-value=1.4e-13  Score=100.57  Aligned_cols=94  Identities=20%  Similarity=0.274  Sum_probs=67.3

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEcC------eEEEEe-cCCC-CC------ccccCCCcceEEEEEeCCHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIAG------STFLVS-NFSN-DS------AAAKNMGIGCVLCLEIDDVEAALAK   80 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~~------~~l~~~-~~~~-~g------~~~~~~~~~~~l~l~v~dvd~~~~~   80 (117)
                      ..|.++  |+++|++||+++||+++....      ....+. +... .+      ......+.++.++|.|+|+|+++++
T Consensus        36 v~l~v~--D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~v~d~d~~~~~  113 (282)
T 3oxh_A           36 VDLQTT--DQSAAKKFYTSLFGWGYDDNPVPGGGGVYSMATLNGEAVAAIAPMPPGAPEGMPPIWNTYIAVDDVDAVVDK  113 (282)
T ss_dssp             EEEEES--CHHHHHHHHHHHHCCEEEEEC-----CCEEEEEETTEEEEEEEECCSCC---CCCEEEEEEECSCHHHHHTT
T ss_pred             EEEecC--CHHHHHHHHHHhcCcEEeecCCCCCccCEEEEEeCCeeeEeeccCCCCCCCCCCCcEEEEEEeCCHHHHHHH
Confidence            445556  999999999999997765321      122221 1110 00      0001123679999999999999999


Q ss_pred             HHhCCCee---------eceEEEEECCCCCeEEEecccC
Q 044588           81 AMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        81 ~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +.++|+++         ++|+++++||+||.|+|++..+
T Consensus       114 l~~~G~~~~~~p~~~~~~g~~~~~~DP~G~~i~l~~~~~  152 (282)
T 3oxh_A          114 VVPGGGQVMMPAFDIGDAGRMSFITDPTGAAVGLWQANR  152 (282)
T ss_dssp             TTTTTCEEEEEEEEETTTEEEEEEECTTCCEEEEEEESS
T ss_pred             HHHCCCEEEECCEecCCCeEEEEEECCCCCEEEEEEccc
Confidence            99999987         2488999999999999998765

>3vw9_A Lactoylglutathione lyase; glyoxalase, lyase-lyase inhibitor complex; HET: EPE HPJ; 1.47A {Homo sapiens} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A* 2za0_A*

Probab=99.54  E-value=1.7e-13  Score=93.53  Aligned_cols=46  Identities=24%  Similarity=0.252  Sum_probs=41.3

Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEecccC
Q 044588           65 CVLCLEIDDVEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        65 ~~l~l~v~dvd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      .+|+|.|+|++++++++.++|+++        +.++++++||+||.|+|+++..
T Consensus       129 ~hl~f~v~dv~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  182 (187)
T 3vw9_A          129 GHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNK  182 (187)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECGGG
T ss_pred             eEEEEEECCHHHHHHHHHHCCCeEeeCCccCCcceEEEEECCCCCEEEEEEccc
Confidence            499999999999999999999988        3457899999999999998754

>2p7o_A Glyoxalase family protein; fosfomycin resistance protein, Mn binding, antibiotic resist metal binding protein, hydrolase; 1.44A {Listeria monocytogenes} PDB: 2p7k_A 2p7l_A 2p7m_A 2p7p_A 2p7q_A

Probab=99.54  E-value=2.4e-13  Score=87.63  Aligned_cols=90  Identities=17%  Similarity=0.102  Sum_probs=64.6

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEE-----------------EEcCeEEEEecCCCCCccccCCCcceEEEEEe--CCH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQL-----------------EIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEI--DDV   74 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l-----------------~~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v--~dv   74 (117)
                      ...|.|+  |+++|++||+++||.++                 ..++..+.+....  .   .+.....+++|.|  +|+
T Consensus         7 hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~--~---~~~~~~~h~~~~v~~~d~   79 (133)
T 2p7o_A            7 HITLIVK--DLNKTTAFLQNIFNAEEIYSSGDKTFSLSKEKFFLIAGLWICIMEGD--S---LQERTYNHIAFQIQSEEV   79 (133)
T ss_dssp             EEEEEES--CHHHHHHHHHHHHCCEECC-----CCCSSCEEEEEETTEEEEEEECS--S---CCCCCSCEEEEECCGGGH
T ss_pred             EEEEEcC--CHHHHHHHHHHhcCCEEeeecCCcccccCCceEEEeCCEEEEEecCC--C---CCCCCeeEEEEEcCHHHH
Confidence            3456677  99999999999999443                 2223233332211  0   0122345788888  599


Q ss_pred             HHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecccC
Q 044588           75 EAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        75 d~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +++++++.++|+++         +.+.++++||+||.|+|.++..
T Consensus        80 ~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  124 (133)
T 2p7o_A           80 DEYTERIKALGVEMKPERPRVQGEGRSIYFYDFDNHLFELHAGTL  124 (133)
T ss_dssp             HHHHHHHHHHTCCEECCCCCCTTCCCEEEEECSSSCEEEEECSSC
T ss_pred             HHHHHHHHHCCCcccCCCccCCCCeeEEEEECCCCCEEEEEcCCh
Confidence            99999999999987         3578999999999999998753

>2rk0_A Glyoxalase/bleomycin resistance protein/dioxygena; 11002Z, glyoxylase, dioxygenas PSI-II; 2.04A {Frankia SP}

Probab=99.54  E-value=5.8e-14  Score=91.26  Aligned_cols=96  Identities=10%  Similarity=0.103  Sum_probs=65.2

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE--c-------------CeEEEEecCCCC-CccccCCCcc-eEEEEEe---CC
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI--A-------------GSTFLVSNFSND-SAAAKNMGIG-CVLCLEI---DD   73 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~--~-------------~~~l~~~~~~~~-g~~~~~~~~~-~~l~l~v---~d   73 (117)
                      ...|.|+  |+++|++||+++||.++..  .             +..+.+...... .......+.+ .+++|.|   +|
T Consensus         8 hv~l~v~--Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~g~~h~~f~v~~~~d   85 (136)
T 2rk0_A            8 HVSLTVR--DLDISCRWYTEILDWKELVRGRGDTTSFAHGVLPGGLSIVLREHDGGGTDLFDETRPGLDHLSFSVESMTD   85 (136)
T ss_dssp             EEEEECS--CHHHHHHHHHHHHCCEEEEEEECSSEEEEEEECTTSCEEEEEEETTCSSSCCCTTSSEEEEEEEEESSHHH
T ss_pred             EEEEEeC--CHHHHHHHHHHhcCCEEEeeccCCCCceEEEEEcCCCEEEEEeCCCCcccCCCCCCCCcceEEEEeCCHHH
Confidence            3456666  9999999999999955432  1             112222221110 0000011233 5899999   89


Q ss_pred             HHHHHHHHHhCCCee-------eceEEEEECCCCCeEEEecccCC
Q 044588           74 VEAALAKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        74 vd~~~~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      ++++++++.++|+++       .++.++++||+||.|+|.+....
T Consensus        86 ~~~~~~~l~~~G~~~~~~~~~~~g~~~~~~DPdG~~iel~~~~~~  130 (136)
T 2rk0_A           86 LDVLEERLAKAGAAFTPTQELPFGWILAFRDADNIALEAMLGREG  130 (136)
T ss_dssp             HHHHHHHHHHHTCCBCCCEEETTEEEEEEECTTCCEEEEEEECTT
T ss_pred             HHHHHHHHHHCCCcccCccccCCceEEEEECCCCCEEEEEEcCCC
Confidence            999999999999987       12788999999999999987653

>3oxh_A RV0577 protein; kinase regulation, antibiotic resistance, mycobacterium tube structural genomics, PSI, protein structure initiative; HET: PMB XYL; 1.75A {Mycobacterium tuberculosis}

Probab=99.54  E-value=3.3e-13  Score=98.51  Aligned_cols=95  Identities=19%  Similarity=0.281  Sum_probs=66.6

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEcC----eE-EEE-ecCCC-CC---ccccCCCcceEEEEEeCCHHHHHHHHHh
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIAG----ST-FLV-SNFSN-DS---AAAKNMGIGCVLCLEIDDVEAALAKAMS   83 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~~----~~-l~~-~~~~~-~g---~~~~~~~~~~~l~l~v~dvd~~~~~~~~   83 (117)
                      ...|.+.  |+++|++||+++||+++....    .. ..+ .+... .+   ........+++++|.|+|+|++++++++
T Consensus       167 ~~~l~v~--D~~~a~~FY~~vlG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dvd~~~~~~~~  244 (282)
T 3oxh_A          167 WNELLTD--KPDLALAFYEAVVGLTHSSMEIAAGQNYRVLKAGDAEVGGCMEPPMPGVPNHWHVYFAVDDADATAAKAAA  244 (282)
T ss_dssp             EEEEECS--CHHHHHHHHHHHHCCEEEEC-------CEEEEETTEEEEEEECCSSTTCCSEEEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEcC--CHHHHHHHHHHHhCCeeeeccCCCCcceEEEEcCCccEeeecCCCCCCCCCeEEEEEEeCCHHHHHHHHHH
Confidence            3345555  999999999999997665321    11 111 11100 00   0011123678999999999999999999


Q ss_pred             CCCee---------eceEEEEECCCCCeEEEecccC
Q 044588           84 GGVWA---------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        84 ~G~~v---------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +|+++         |.|+++++||+||.|+|+++..
T Consensus       245 ~G~~~~~~p~~~~~~~~~~~~~DPdGn~~~l~~~~~  280 (282)
T 3oxh_A          245 AGGQVIAEPADIPSVGRFAVLSDPQGAIFSVLKAAP  280 (282)
T ss_dssp             TTCEEEEEEEEETTTEEEEEEECTTSCEEEEEEEC-
T ss_pred             cCCEEecCCeEcCCCeEEEEEECCCCCEEEEEecCC
Confidence            99988         3789999999999999998764

>2za0_A Glyoxalase I; lyase, lactoylglutathione lyase, methyl- gerfelin; HET: MGI; 1.70A {Mus musculus} PDB: 1qip_A* 1fro_A* 1qin_A* 1bh5_A*

Probab=99.54  E-value=2.8e-13  Score=92.44  Aligned_cols=47  Identities=23%  Similarity=0.232  Sum_probs=41.8

Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEecccCC
Q 044588           65 CVLCLEIDDVEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        65 ~~l~l~v~dvd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      .+++|.|+|++++++++.++|+++        +.++++++||+||.|+|.++...
T Consensus       126 ~hi~f~v~dvd~~~~~l~~~G~~~~~~p~~~~~~~~~~~~DPdG~~iel~~~~~~  180 (184)
T 2za0_A          126 GHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKI  180 (184)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCCEEECTTSSSSTTCEEEECTTCCEEEEECTTTG
T ss_pred             eEEEEEeCCHHHHHHHHHHCCCeeecCCcCCCceeEEEEECCCCCEEEEEecCcc
Confidence            589999999999999999999987        34678999999999999987654

>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2

Probab=99.52  E-value=3.3e-13  Score=88.04  Aligned_cols=88  Identities=11%  Similarity=0.034  Sum_probs=63.5

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEE-----------------EcCeEEEEecCCCCCccccCCCcceEEEEEeC--CHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLE-----------------IAGSTFLVSNFSNDSAAAKNMGIGCVLCLEID--DVE   75 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~-----------------~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~--dvd   75 (117)
                      ..|.|+  |++++.+||+++||.++.                 .++..+.+... + ..   +.+...+++|.|+  |++
T Consensus         8 v~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~-~-~~---~~~~~~h~~~~v~~~d~~   80 (139)
T 1r9c_A            8 MTFIVR--DLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQG-E-KL---AERSYNHIAFKIDDADFD   80 (139)
T ss_dssp             EEEEES--CHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEEC-C-CC---SSCCSCEEEEECCGGGHH
T ss_pred             EEEEeC--CHHHHHHHHHHhhCCEEeecCCCccccccceEEEEECCEEEEEEeC-C-CC---CCCCeeEEEEEcCHHHHH
Confidence            456666  999999999999994432                 23333333321 1 11   1223457888888  999


Q ss_pred             HHHHHHHhCCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           76 AALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        76 ~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++++++.++|+++         +.+.++++||+||.|+|.+..
T Consensus        81 ~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  123 (139)
T 1r9c_A           81 RYAERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (139)
T ss_dssp             HHHHHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             HHHHHHHHCCCcccCCcccCCCCeEEEEEECCCCCEEEEEeCC
Confidence            9999999999887         457889999999999999853

>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}

Probab=99.52  E-value=3.6e-13  Score=88.59  Aligned_cols=91  Identities=14%  Similarity=0.066  Sum_probs=59.6

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc--C-eEEEE-ecCCC--CC---ccccCCCcceEEEEEeCCHHHHHHHHHhCC
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA--G-STFLV-SNFSN--DS---AAAKNMGIGCVLCLEIDDVEAALAKAMSGG   85 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~--~-~~l~~-~~~~~--~g---~~~~~~~~~~~l~l~v~dvd~~~~~~~~~G   85 (117)
                      ..|.|.  |++++.+||+++||.++...  + ....+ .....  ..   .+.......+.+.+.++|++++++++.++|
T Consensus        32 v~l~v~--Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~h~~~~v~~~dld~~~~~l~~~G  109 (141)
T 3ghj_A           32 VAVKVK--NLEKSSQFYTEILGFEAGLLDSARRWNFLWVSGRAGMVVLQEEKENWQQQHFSFRVEKSEIEPLKKALESKG  109 (141)
T ss_dssp             EEEEES--CHHHHHHHHHHTSCCEEEEEETTTTEEEEEETTTTEEEEEEECCSSCCCCEEEEEECGGGHHHHHHHHHHTT
T ss_pred             EEEEeC--CHHHHHHHHHHhcCCEEEEecCCCcEEEEEecCCCcEEEEeccCCCCCCceEEEEEeHHHHHHHHHHHHHCC
Confidence            456777  99999999999999655432  1 12211 11100  00   001111133444444459999999999999


Q ss_pred             Cee---------eceEEEEECCCCCeEEEec
Q 044588           86 VWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        86 ~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      +++         +.+.++++||+||.|+|++
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~  140 (141)
T 3ghj_A          110 VSVHGPVNQEWMQAVSLYFADPNGHALEFTA  140 (141)
T ss_dssp             CCCEEEEEEGGGTEEEEEEECTTCCEEEEEE
T ss_pred             CeEeCCcccCCCCceEEEEECCCCCEEEEEE
Confidence            987         3588999999999999985

>1jc4_A Methylmalonyl-COA epimerase; vicinal oxygen chelate superfamily, isomerase; 2.00A {Propionibacterium freudenreichiisubsp} SCOP: d.32.1.4 PDB: 1jc5_A

Probab=99.49  E-value=3.7e-13  Score=87.79  Aligned_cols=94  Identities=20%  Similarity=0.196  Sum_probs=62.0

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc------CeE----------------EEEecCCCCCccc----cCCC--cc-e
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA------GST----------------FLVSNFSNDSAAA----KNMG--IG-C   65 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~------~~~----------------l~~~~~~~~g~~~----~~~~--~~-~   65 (117)
                      ..|.|+  |++++++||+++||.++...      +..                |.+........+.    ...+  .+ .
T Consensus        13 v~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~g~~   90 (148)
T 1jc4_A           13 VAYACP--DADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAGLH   90 (148)
T ss_dssp             EEEECS--CHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCCEEE
T ss_pred             EEEEeC--CHHHHHHHHHHccCceeeecccCCCCCeEEEEEEcCCCCcCcceEEEEeecCCCCChHHHHHHhCCCCCceE
Confidence            455566  99999999999999544321      211                2121110000000    0111  23 5


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCee----------eceEEEE--ECCCCCeEEEecccC
Q 044588           66 VLCLEIDDVEAALAKAMSGGVWA----------TGRVGKV--KDPCGFTWLIYSPVK  110 (117)
Q Consensus        66 ~l~l~v~dvd~~~~~~~~~G~~v----------g~r~~~v--~DP~G~~w~l~~~~~  110 (117)
                      +++|.|+|++++++++.++|+++          |.+..++  +||+||.|+|.++.+
T Consensus        91 h~~~~v~d~~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~~~~  147 (148)
T 1jc4_A           91 HMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYPK  147 (148)
T ss_dssp             EEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECCC
T ss_pred             EEEEECCCHHHHHHHHHHCCCeecCcCcccCCCceEEEEEeecCCCcEEEEEEecCC
Confidence            89999999999999999999876          3356666  999999999998653

>3ct8_A Protein BH2160, putative glyoxalase; NP_243026.1, glyoxalase/bleomycin resis protein/dioxygenase superfamily, structural genomics; HET: UNL; 2.10A {Bacillus halodurans c-125}

Probab=99.46  E-value=1.9e-12  Score=85.67  Aligned_cols=93  Identities=13%  Similarity=0.118  Sum_probs=64.9

Q ss_pred             eEEEEecCCCHHHHHHHH---HhhhCeEEEE----------cCeEEEEecCCC--CCccccCCCcc-eEEEEEeC---CH
Q 044588           14 KPQLLVEESKATNVVQFY---KTTSGAQLEI----------AGSTFLVSNFSN--DSAAAKNMGIG-CVLCLEID---DV   74 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY---~~~fG~~l~~----------~~~~l~~~~~~~--~g~~~~~~~~~-~~l~l~v~---dv   74 (117)
                      ...|.|+  |++++++||   +++||.++..          ++..+.+.....  .+.+......+ .+++|.|+   |+
T Consensus        23 hv~l~v~--Dl~~a~~FY~~~~~~LG~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~~hi~f~v~~~~dv  100 (146)
T 3ct8_A           23 HVEINVD--HLEESIAFWDWLLGELGYEDYQSWSRGKSYKHGKTYLVFVQTEDRFQTPTFHRKRTGLNHLAFHAASREKV  100 (146)
T ss_dssp             EEEEEES--CHHHHHHHHHHHHHHTTCEEEEEETTEEEEEETTEEEEEEECCGGGSCSCCCTTSSSCCEEEEECSCHHHH
T ss_pred             EEEEEeC--CHHHHHHHHHhhhhhCCCEEEEecCCCceEecCCeEEEEEEcCCCcccccccccCCCceEEEEECCCHHHH
Confidence            4567777  999999999   9999955432          222333332210  00111111134 68999999   99


Q ss_pred             HHHHHHHHhCCCee------------eceEEEEECCCCCeEEEecc
Q 044588           75 EAALAKAMSGGVWA------------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        75 d~~~~~~~~~G~~v------------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +++++++.++|+++            |.+.++++||+||.|+|+++
T Consensus       101 ~~~~~~l~~~G~~~~~~~p~~~~~g~~~~~~~~~DPdG~~iel~~p  146 (146)
T 3ct8_A          101 DELTQKLKERGDPILYEDRHPFAGGPNHYAVFCEDPNRIKVEIVAP  146 (146)
T ss_dssp             HHHHHHHHHHTCCBCCTTTTTCTTCTTCCEEEEECTTCCEEEEECC
T ss_pred             HHHHHHHHHcCCccccCCCccccCCCceEEEEEECCCCCEEEEEeC
Confidence            99999999999876            13578999999999999864

>1xqa_A Glyoxalase/bleomycin resistance protein; dioxygenase, structural GEN midwest center for structural genomics, MCSG; HET: P6G; 1.80A {Bacillus cereus atcc 14579} SCOP: d.32.1.2

Probab=99.44  E-value=1.1e-12  Score=82.45  Aligned_cols=91  Identities=12%  Similarity=0.074  Sum_probs=62.7

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc--CeEEEEecCC-C-C---CccccCCCcceEEEEEe---CCHHHHHHHHHh
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA--GSTFLVSNFS-N-D---SAAAKNMGIGCVLCLEI---DDVEAALAKAMS   83 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~--~~~l~~~~~~-~-~---g~~~~~~~~~~~l~l~v---~dvd~~~~~~~~   83 (117)
                      ...|.++  |++++.+||+++||.++...  +....+.... . .   ..+..+.+...+++|.|   +|++++++++.+
T Consensus         6 hv~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~l~~   83 (113)
T 1xqa_A            6 HLNLTVA--DVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEVQYPKTFHVGFPQESEEQVDKINQRLKE   83 (113)
T ss_dssp             EEEEEES--CHHHHHHHHHHHHCCEEEEEETTTEEEEECTTCCEEEEEECSSCCCCTTCCEEEECSSHHHHHHHHHHHHH
T ss_pred             EEEEEeC--CHHHHHHHHHHhCCCEEeccCCCcEEEEEcCCCcEEEEEeCCCCCCCceeEEEEEcCCHHHHHHHHHHHHH
Confidence            4567777  99999999999999655421  2122221110 0 0   00011112457899999   899999999999


Q ss_pred             CCCee------eceEEEEECCCCCeEEEe
Q 044588           84 GGVWA------TGRVGKVKDPCGFTWLIY  106 (117)
Q Consensus        84 ~G~~v------g~r~~~v~DP~G~~w~l~  106 (117)
                      +|+++      +.+.++++||+||.|+|.
T Consensus        84 ~G~~~~~p~~~~~~~~~~~DPdG~~iel~  112 (113)
T 1xqa_A           84 DGFLVEPPKHAHAYTFYVEAPGGFTIEVM  112 (113)
T ss_dssp             TTCCCCCCEEC-CEEEEEEETTTEEEEEE
T ss_pred             CCCEEecCcCCCcEEEEEECCCCcEEEEe
Confidence            99887      357889999999999986

>1twu_A Hypothetical protein YYCE; structural genomics, protein structure initiative, MCSG, DUP of the alpha-beta sandwichs. bacillus subtilis, PSI; 2.00A {Bacillus subtilis} SCOP: d.32.1.8

Probab=99.44  E-value=1.7e-12  Score=84.60  Aligned_cols=100  Identities=10%  Similarity=0.114  Sum_probs=66.0

Q ss_pred             CCCcceeEEEEecCCCHHHHHHHHHhhhCeEEEE-----cCeE-EEEecCCC---------CCccccCCCc-ceEEEEEe
Q 044588            8 ANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEI-----AGST-FLVSNFSN---------DSAAAKNMGI-GCVLCLEI   71 (117)
Q Consensus         8 ~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~-----~~~~-l~~~~~~~---------~g~~~~~~~~-~~~l~l~v   71 (117)
                      |+...+...|.|+  |+++|++||+++||.++..     ++.. +.+.....         .+......+. ..+++|.|
T Consensus         8 m~~~~~~i~l~v~--Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~hi~~~v   85 (139)
T 1twu_A            8 FQAAQIRIARPTG--QLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYV   85 (139)
T ss_dssp             CBCSCEEEEEECS--CHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCCCCCCCCTTCEEEEEC
T ss_pred             CCcceeEEeeEeC--CHHHHHHHHHhcCCcEEEEeccCCCCeeEEEEecCCCceEEEEeecCCCCCCCCCCCccEEEEEe
Confidence            5555667777788  9999999999999954421     1111 22221100         0110111112 36899999


Q ss_pred             CCH---HHHHHHHHhCCCee--------eceEEEEECCCCCeEEEeccc
Q 044588           72 DDV---EAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        72 ~dv---d~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +|+   +++++++.++|+++        +.+-.+++||+||.|+|.++.
T Consensus        86 ~d~~~l~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~DPdG~~iel~~~~  134 (139)
T 1twu_A           86 PNAVELAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSK  134 (139)
T ss_dssp             CCHHHHHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSC
T ss_pred             CCcchHHHHHHHHHHcCCcCcCCCCcccCCCCeEEECCCCCEEEEEEcC
Confidence            999   99999999999876        111126999999999999864

>3gm5_A Lactoylglutathione lyase and related lyases; sheet-helix-sheet-sheet-sheet motif, isomerase; HET: CIT; 2.00A {Thermoanaerobacter tengcongensis}

Probab=99.41  E-value=2.1e-12  Score=85.90  Aligned_cols=93  Identities=12%  Similarity=0.177  Sum_probs=64.9

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEE------------------------------EEcCeEEEEecCCCCCcccc----
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQL------------------------------EIAGSTFLVSNFSNDSAAAK----   59 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l------------------------------~~~~~~l~~~~~~~~g~~~~----   59 (117)
                      ...|.|+  |+++|++||+++||.++                              ..++..+.+........+..    
T Consensus        22 Hv~i~V~--Dle~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~leL~~~~~~~~~~~~~l~   99 (159)
T 3gm5_A           22 QIGIVVR--DIEESLQNYAEFFGVEKPQWFWTDDYSKAHTKFNGRPTKARAKLAFFELGPLQLELIEPDENPSTWREFLD   99 (159)
T ss_dssp             EEEEECS--CHHHHHHHHHHHTTCCCCCCEECCCHHHHCCEETTEECCCCEEEEEEEETTEEEEEEEECSSSCHHHHHHH
T ss_pred             EEEEEeC--CHHHHHHHHHHhhCCCCceEEecCCcccccceeecccccceEEEEEEecCCEEEEEEEECCCCChhHHHhh
Confidence            3445666  99999999999999432                              12233333332211001000    


Q ss_pred             CCCcce-EEEEEeCCHHHHHHHHHhCCCee-------eceEEEEECCC--CCeEEEecc
Q 044588           60 NMGIGC-VLCLEIDDVEAALAKAMSGGVWA-------TGRVGKVKDPC--GFTWLIYSP  108 (117)
Q Consensus        60 ~~~~~~-~l~l~v~dvd~~~~~~~~~G~~v-------g~r~~~v~DP~--G~~w~l~~~  108 (117)
                      ..+.++ +|+|.|+|++++++++.++|+++       |.++++++||+  |+.|+|+++
T Consensus       100 ~~~~g~~Hiaf~v~di~~~~~~l~~~G~~~~~~~~~~g~~~~~~~dpd~~G~~iEl~e~  158 (159)
T 3gm5_A          100 KNGEGIHHIAFVVKDMDRKVEELYRKGMKVIQKGDFEGGRYAYIDTLRALKVMIELLEN  158 (159)
T ss_dssp             HHCSEEEEEEEECSCHHHHHHHHHHTTCCEEEEEEETTEEEEEESCHHHHSSEEEEEEE
T ss_pred             cCCceEEEEEEEcCCHHHHHHHHHHCCCcEeeccccCCeeEEEEeccccCcEEEEEEec
Confidence            012454 89999999999999999999987       57899999999  999999875

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.34  E-value=3.9e-11  Score=88.66  Aligned_cols=109  Identities=16%  Similarity=0.220  Sum_probs=73.6

Q ss_pred             CCCccccCCCcce----eEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEec-CCC--CCcc--ccCCCcceEEEEE
Q 044588            1 MAAPATLANFMGM----KPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSN-FSN--DSAA--AKNMGIGCVLCLE   70 (117)
Q Consensus         1 ~~~~~~~~~~~~~----~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~-~~~--~g~~--~~~~~~~~~l~l~   70 (117)
                      ||.||.-+.-+.+    ...|.++  |++++.+||+++||.++... +..+.+.. ...  ....  ........+++|.
T Consensus         3 m~~p~~~~~~~~i~~l~hv~l~v~--Dl~~a~~FY~~vlG~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~f~   80 (323)
T 1f1u_A            3 NFVPTPSVPAPDIVRCAYMEIVVT--DLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAVAAFAYR   80 (323)
T ss_dssp             CCCCCCSSCCCCEEEEEEEEEEES--CHHHHHHHHTTTTCCEEEEECSSEEEEECTTCCSSCSEEEEECSSCEEEEEEEE
T ss_pred             CCCCCCCCCCcccceeeEEEEEeC--CHHHHHHHHHhCCCCEEeeecCCEEEEEecCCCCcEEEEEEECCCCCeeEEEEE
Confidence            5667655443333    3345556  99999999999999766543 34444432 111  1110  1111133589999


Q ss_pred             e---CCHHHHHHHHHhCCCee----------eceEEEEECCCCCeEEEecccCC
Q 044588           71 I---DDVEAALAKAMSGGVWA----------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        71 v---~dvd~~~~~~~~~G~~v----------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      |   +|++++++++.++|+++          +++.++++||+||.|+|.+..+.
T Consensus        81 v~~~~dl~~~~~~l~~~G~~~~~~~~~~~~~~g~~~~~~DP~G~~iel~~~~~~  134 (323)
T 1f1u_A           81 VKSPAEVDAAEAYYKELGCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEH  134 (323)
T ss_dssp             ESSHHHHHHHHHHHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCC
T ss_pred             eCCHHHHHHHHHHHHhCCCcEEeccccccCCcceEEEEECCCCCEEEEEEeccc
Confidence            9   79999999999999877          25788999999999999987643

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.26  E-value=1.5e-10  Score=85.93  Aligned_cols=95  Identities=9%  Similarity=0.042  Sum_probs=64.5

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc-----Ce--E-EEEecCC-CCC----------ccc-cCC-CcceEEEEEeC
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA-----GS--T-FLVSNFS-NDS----------AAA-KNM-GIGCVLCLEID   72 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-----~~--~-l~~~~~~-~~g----------~~~-~~~-~~~~~l~l~v~   72 (117)
                      ...|.|+  |+++|++||+++||+++...     +.  . +.+.+.. ..+          .+. ... ....+++|.|+
T Consensus        33 hv~l~v~--Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~hiaf~v~  110 (338)
T 1zsw_A           33 HISMVTK--NANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLLVP  110 (338)
T ss_dssp             EEEEEES--CHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEEES
T ss_pred             EEEEEcC--CHHHHHHHHHHhcCCEEEEeecccCCCceEEEEEcCCCCCCCCEEEEEECCCCccCcCCCCCeeeEEEEcC
Confidence            3456677  99999999999999655321     11  1 1122210 000          000 111 12357899988


Q ss_pred             ---CHHHHHHHHHhCCCee-------eceEEEEECCCCCeEEEecccC
Q 044588           73 ---DVEAALAKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        73 ---dvd~~~~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                         |++++++++.++|+++       |.+.++|+||+||.|+|++...
T Consensus       111 ~~~dld~~~~~l~~~G~~~~~~~~~~G~~~~~f~DPdG~~iel~~~~~  158 (338)
T 1zsw_A          111 SEDSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG  158 (338)
T ss_dssp             CHHHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTT
T ss_pred             CHHHHHHHHHHHHHCCCccccccccCCcEEEEEECCCCCEEEEEEcCC
Confidence               7899999999999987       4578899999999999998764

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.23  E-value=1.2e-10  Score=85.58  Aligned_cols=102  Identities=17%  Similarity=0.098  Sum_probs=68.6

Q ss_pred             cCCCcce-eEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCC---CCC--ccccCCCcceEEEEEe---CCHHH
Q 044588            7 LANFMGM-KPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFS---NDS--AAAKNMGIGCVLCLEI---DDVEA   76 (117)
Q Consensus         7 ~~~~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~---~~g--~~~~~~~~~~~l~l~v---~dvd~   76 (117)
                      .|+.+++ ...|.++  |++++.+||+++||.++... +..+.+....   ...  ...........+.+.|   +|+++
T Consensus         3 ~~~i~~l~~v~l~v~--Dl~~a~~FY~~vlG~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~~~~~~v~~~~dld~   80 (310)
T 3b59_A            3 LSRVTEIRYVGYGVK--DFDAEKAFYADVWGLEPVGEDANNAWFKAQGADEHHVVQLRRADENRIDVIALAADSRSDVDA   80 (310)
T ss_dssp             CCCEEEEEEEEEEES--SHHHHHHHHHHTTCCEEEEECSSEEEEECTTSCCSCSEEEEECSSCEEEEEEEEESSHHHHHH
T ss_pred             ceecceeeEEEEecC--CHHHHHHHHHhCcCCEEeeecCCeEEEEECCCCCCEEEEEEECCCCCeeEEEEEeCCHHHHHH
Confidence            3444444 3456666  99999999999999766432 3344443221   000  0011111234788887   78999


Q ss_pred             HHHHHHhCCCee-----------eceEEEEECCCCCeEEEecccC
Q 044588           77 ALAKAMSGGVWA-----------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        77 ~~~~~~~~G~~v-----------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +++++.++|+++           +.+.++++||+||.|+|.+..+
T Consensus        81 ~~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  125 (310)
T 3b59_A           81 LRASVEAAGCKVASEPAVLATPGGGYGFRFFSPDGLLFEVSSDVA  125 (310)
T ss_dssp             HHHHHHHHTCCBCCCSEECCSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             HHHHHHhCCCeEeecCccccccCCceEEEEECCCCCEEEEEEccc
Confidence            999999999876           3567899999999999998754

>1zsw_A Metallo protein, glyoxalase family protein; hypothetical protein from glyoxalase family, structural GENO PSI, protein structure initiative; 1.65A {Bacillus cereus} SCOP: d.32.1.10 d.32.1.10

Probab=99.21  E-value=3.3e-10  Score=84.06  Aligned_cols=93  Identities=9%  Similarity=0.035  Sum_probs=63.4

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEec---CC--C-----CCccccCCC--cceEEEEEeC---CHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSN---FS--N-----DSAAAKNMG--IGCVLCLEID---DVEAAL   78 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~---~~--~-----~g~~~~~~~--~~~~l~l~v~---dvd~~~   78 (117)
                      ..|.|+  |++++++||+++||.++... +....+..   ..  .     .+.+....+  ...+++|.|+   |+++++
T Consensus       184 v~l~v~--Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~hiaf~v~~~~dv~~~~  261 (338)
T 1zsw_A          184 VELTVR--RLDKMASTLTEIFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKNDAELAYWE  261 (338)
T ss_dssp             EEEEES--CHHHHHHHHHHTTCCEEEEECSSEEEEESSTTCSTTCEEEEECCSSBCBCCBTCEEEEEEEESSHHHHHHHH
T ss_pred             EEEEEC--CHHHHHHHHHHhcCCEEEeecCCeEEEEecCCCCceEEEEeccCCCCCCCCCCceEEEEEEeCCHHHHHHHH
Confidence            456677  99999999999999665432 11111111   00  0     000001111  2358999998   799999


Q ss_pred             HHHHhCCCee-------eceEEEEECCCCCeEEEeccc
Q 044588           79 AKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        79 ~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +++.++|+++       +.+.++++||+||.|+|.+..
T Consensus       262 ~~l~~~G~~~~~~~~~~~~~~~~~~DPdG~~iEl~~~~  299 (338)
T 1zsw_A          262 EQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATDG  299 (338)
T ss_dssp             HHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEEE
T ss_pred             HHHHHCCCceeeeeecCceEEEEEECCCCCEEEEEEcC
Confidence            9999999887       457789999999999999754

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.19  E-value=4.1e-10  Score=82.32  Aligned_cols=95  Identities=15%  Similarity=0.130  Sum_probs=65.5

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc--CeEEEEe--cCCC-CCc--cccCCCcceEEEEEeCC---HHHHHHHHHh
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA--GSTFLVS--NFSN-DSA--AAKNMGIGCVLCLEIDD---VEAALAKAMS   83 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~--~~~l~~~--~~~~-~g~--~~~~~~~~~~l~l~v~d---vd~~~~~~~~   83 (117)
                      ...|.|+  |++++++||+++||.++...  +..+.+.  +... ...  .........++.+.|+|   ++++++++.+
T Consensus        11 hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~~~~h~a~~v~~~~dl~~~~~~l~~   88 (309)
T 3hpy_A           11 HAQVRVL--NLEEGIHFYRNVLGLVETGRDDQGRVYFKCWDERDHSCYIIREADTAGIDFFGFKVLDKATLEKLDADLQA   88 (309)
T ss_dssp             EEEEEES--SHHHHHHHHHHTSCCEEEEECTTSCEEEECTTCCBSCSEEEEECSSCEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred             EEEEEcC--CHHHHHHHHHhccCCEEEEEcCCCeEEEEeccCCCceEEEEEeCCCCceeEEEEEECCHHHHHHHHHHHHh
Confidence            3456666  99999999999999776543  2334433  2111 000  01111134578888875   8999999999


Q ss_pred             CCCee----------eceEEEEECCCCCeEEEecccC
Q 044588           84 GGVWA----------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        84 ~G~~v----------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +|+++          +.+..+|+||+||.|+|++...
T Consensus        89 ~G~~~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~~  125 (309)
T 3hpy_A           89 YGLTTTRIPAGEMLETGERVRFELPSGHLIELYAEKT  125 (309)
T ss_dssp             HTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             CCCceeeccCCccCCCeeEEEEECCCCCEEEEEEccc
Confidence            99877          2468899999999999998754

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=99.19  E-value=5.5e-10  Score=83.51  Aligned_cols=93  Identities=16%  Similarity=0.117  Sum_probs=63.5

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE-----c--CeE-EEEecCCC-----------CCccccCCC-cc-eEEEEEeC--
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI-----A--GST-FLVSNFSN-----------DSAAAKNMG-IG-CVLCLEID--   72 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~-----~--~~~-l~~~~~~~-----------~g~~~~~~~-~~-~~l~l~v~--   72 (117)
                      .|.|+  |++++.+||+++||.++..     +  +.. +.+.+...           .+.+....+ .+ .+++|.|+  
T Consensus        13 ~l~v~--Dl~~s~~FY~~vLGl~~v~~~~~~~~~~~~~l~~~~~~g~~g~~l~l~~~~~~~~~~~~~~~~~hiaf~V~~~   90 (335)
T 3oaj_A           13 TAIVG--HPQENTDFYAGVLGLRLVKQTVNFDDPGTYHLYFGNEGGKPGTIITFFPWAGARQGVIGDGQVGVTSYVVPKG   90 (335)
T ss_dssp             EEEES--CHHHHHHHHTTTTCCEEEEEEECSSCTTSEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEEECTT
T ss_pred             EEEeC--CHHHHHHHHHHhcCCEEEeeecCCCCCceEEEEEecCCCCCCcEEEEEECCCCCCCCCCCCceEEEEEEecHH
Confidence            45566  9999999999999955432     1  111 22222110           000011111 23 47899999  


Q ss_pred             CHHHHHHHHHhCCCee------eceEEEEECCCCCeEEEecccC
Q 044588           73 DVEAALAKAMSGGVWA------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        73 dvd~~~~~~~~~G~~v------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      |++++++++.++|+++      |.+..+|+||+||.|+|.+...
T Consensus        91 dl~~~~~rL~~~Gv~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  134 (335)
T 3oaj_A           91 AMAFWEKRLEKFNVPYTKIERFGEQYVEFDDPHGLHLEIVEREE  134 (335)
T ss_dssp             CHHHHHHHHHHTTCCCEEEEETTEEEEEEECTTSCEEEEEECSC
T ss_pred             HHHHHHHHHHhCcceeeeeccCCcEEEEEECCCCCEEEEEEeCC
Confidence            9999999999999876      5678899999999999998653

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.19  E-value=1.9e-10  Score=83.87  Aligned_cols=95  Identities=15%  Similarity=0.155  Sum_probs=67.2

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc--CeEEEEecCC---CCCc--cccCCCcceEEEEEe---CCHHHHHHHHHh
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA--GSTFLVSNFS---NDSA--AAKNMGIGCVLCLEI---DDVEAALAKAMS   83 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~--~~~l~~~~~~---~~g~--~~~~~~~~~~l~l~v---~dvd~~~~~~~~   83 (117)
                      ...|.|+  |++++++||+++||.++...  ++.+.+....   ....  .........+++|.|   +|++++++++.+
T Consensus        10 hv~l~v~--Dl~~a~~FY~~~lG~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~f~v~~~~dv~~~~~~l~~   87 (307)
T 1mpy_A           10 HVQLRVL--DMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLERDLMA   87 (307)
T ss_dssp             EEEEEES--CHHHHHHHHHHTTCCEEEEECTTSCEEEECTTCCBSCSEEEEECSSCEEEEEEEEESCHHHHHHHHHHHHH
T ss_pred             eEEEEeC--CHHHHHHHHHHccCCEEEeecCCCcEEEEecCCCCceEEEEccCCCCCcceEEEEeCCHHHHHHHHHHHHH
Confidence            3456667  99999999999999776542  2334443211   1010  011111346899999   899999999999


Q ss_pred             CCCee----------eceEEEEECCCCCeEEEecccC
Q 044588           84 GGVWA----------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        84 ~G~~v----------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +|+++          +.+.++++||+||.|+|+++.+
T Consensus        88 ~G~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  124 (307)
T 1mpy_A           88 YGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (307)
T ss_dssp             HTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             cCCceecCCcccCCCceEEEEEECCCCCEEEEEEcch
Confidence            99877          2478899999999999998654

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.19  E-value=1.2e-10  Score=85.08  Aligned_cols=93  Identities=16%  Similarity=0.047  Sum_probs=62.8

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc--CeEEEEecCC-CCCcc--ccCCCcceEEEEEeC---CHHHHHHHHHhCCC
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA--GSTFLVSNFS-NDSAA--AKNMGIGCVLCLEID---DVEAALAKAMSGGV   86 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~--~~~l~~~~~~-~~g~~--~~~~~~~~~l~l~v~---dvd~~~~~~~~~G~   86 (117)
                      ..|.|+  |+++|++||+++||.++...  +....+.-.. .....  ........++.+.|+   |++++++++.++|+
T Consensus        13 v~l~v~--Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~v~~~~dl~~~~~~l~~~G~   90 (302)
T 2ehz_A           13 MGISVK--DPDAWKSFATDMLGLQVLDEGEKDRFYLRMDYWHHRIVVHHNGQDDLEYLGWRVAGKPEFEALGQKLIDAGY   90 (302)
T ss_dssp             EEEECS--CHHHHHHHHHHTTCCEEECCSCSSEEEEESSSBSCSEEEESSCCSEEEEEEEEESSHHHHHHHHHHHHHTTC
T ss_pred             EEEEeC--CHHHHHHHHHhcCCCEEEeccCCcceEEEeCCCceEEEEecCCCCCeeEEEEEECCHHHHHHHHHHHHHCCC
Confidence            345666  99999999999999877642  2333332211 10000  111112246777774   78999999999999


Q ss_pred             ee------------eceEEEEECCCCCeEEEeccc
Q 044588           87 WA------------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        87 ~v------------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++            +.+.++++||+||.|+|.+..
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~  125 (302)
T 2ehz_A           91 KIRICDKVEAQERMVLGLMKTEDPGGNPTEIFWGP  125 (302)
T ss_dssp             CCEECCHHHHHHHTEEEEEEEECTTSCEEEEEEEE
T ss_pred             cEEECCccccccccceEEEEEECCCCCEEEEEECC
Confidence            86            146778999999999999763

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.17  E-value=4.2e-10  Score=81.64  Aligned_cols=94  Identities=14%  Similarity=0.045  Sum_probs=65.3

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCC-CCCc--cccCCCcceEEEEEeC---CHHHHHHHHHhCCCe
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFS-NDSA--AAKNMGIGCVLCLEID---DVEAALAKAMSGGVW   87 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~-~~g~--~~~~~~~~~~l~l~v~---dvd~~~~~~~~~G~~   87 (117)
                      ..|.|+  |++++++||+++||.++... +..+.+.... ....  .........++.|.|+   |++++++++.++|++
T Consensus         8 v~l~v~--Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~   85 (297)
T 1lgt_A            8 MGFAVS--DVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAWRIAVQQGEVDDLAFAGYEVADAAGLAQMADKLKQAGIA   85 (297)
T ss_dssp             EEEEES--CHHHHHHHHHHTTCCEEEEEETTEEEEESSSBSCSEEEEECTTCEEEEEEEEESSHHHHHHHHHHHHHTTCC
T ss_pred             EEEEcC--CHHHHHHHHHHccCCEEeecCCCeEEEEeCCCcEEEEEecCCCCCccEEEEEeCCHHHHHHHHHHHHHCCCe
Confidence            345666  99999999999999776532 2333332111 0000  0111112347899998   999999999999987


Q ss_pred             e------------eceEEEEECCCCCeEEEecccC
Q 044588           88 A------------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        88 v------------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +            +.+.++++||+||.|+|.+...
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (297)
T 1lgt_A           86 VTTGDASLARRRGVTGLITFADPFGLPLEIYYGAS  120 (297)
T ss_dssp             CEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             EEeCCccccccCCceeEEEEECCCCCEEEEEECcc
Confidence            6            2468899999999999998653

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.17  E-value=1.2e-09  Score=81.31  Aligned_cols=94  Identities=12%  Similarity=0.167  Sum_probs=66.1

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCCC-CCc--c--ccCCCcceEEEEEeCC---HHHHHHHHHhC
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFSN-DSA--A--AKNMGIGCVLCLEIDD---VEAALAKAMSG   84 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~~-~g~--~--~~~~~~~~~l~l~v~d---vd~~~~~~~~~   84 (117)
                      ...|.|+  |++++++||+++||.++... +..+.+..... ...  .  ......-.++.|.|+|   ++++++++.++
T Consensus        14 hv~l~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~l~~~~~~~~~~l~l~~~~~~g~~~~af~v~~~~dld~~~~~l~~~   91 (339)
T 3lm4_A           14 RAELFSP--KPQETLDFFTKFLGMYVTHREGQSVYLRGYEDPYPWSLKITEAPEAGMGHAAMRTSSPEALERRAKSLTDG   91 (339)
T ss_dssp             EEEEEES--SHHHHHHHHHHTTCCEEEEEETTEEEEECTTCSSSCSEEEEECSSCEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred             EEEEEeC--CHHHHHHHHHhcCCCEEEEecCCEEEEEecCCCCceEEEEeeCCCCCcceEEEEeCCHHHHHHHHHHHHHC
Confidence            3456666  99999999999999766542 34444432111 111  0  1111134578888886   89999999999


Q ss_pred             CCee--------eceEEEEECCCCCeEEEeccc
Q 044588           85 GVWA--------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        85 G~~v--------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      |+++        +.+..+|+||+||.|+|+...
T Consensus        92 G~~~~~~~~~~~~~~~~~f~DPdG~~iel~~~~  124 (339)
T 3lm4_A           92 NVDGTWSEDQFGYGKTFEYQSPDGHNLQLLWEA  124 (339)
T ss_dssp             TCCEEEECCSTTBCCEEEEECTTCCEEEEECCB
T ss_pred             CCceeeccCCCCceEEEEEECCCCCEEEEEEee
Confidence            9987        367899999999999998764

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.16  E-value=5.4e-10  Score=81.57  Aligned_cols=92  Identities=12%  Similarity=0.054  Sum_probs=63.5

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE-c-CeEEEEecCC-CCCc--cccCCCcceEEEEEeC---CHHHHHHHHHhCCC
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI-A-GSTFLVSNFS-NDSA--AAKNMGIGCVLCLEID---DVEAALAKAMSGGV   86 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~-~-~~~l~~~~~~-~~g~--~~~~~~~~~~l~l~v~---dvd~~~~~~~~~G~   86 (117)
                      ..|.|+  |++++++||+++||.++.. . +....+.-.. ....  .........++.|.|+   |++++++++.++|+
T Consensus        10 v~l~v~--Dl~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~f~v~~~~dl~~~~~~l~~~G~   87 (305)
T 2wl9_A           10 LGLSVS--NLDAWRDYAAGIMGMQVVDDGEDDRIYLRMDRWHHRIVLHADGSDDLAYIGWRVAGPVELDELAEQLKNAGI   87 (305)
T ss_dssp             EEEECS--CHHHHHHHHTTTTCCEEECCSCTTEEEEECSSBSCSEEEECSSCCEEEEEEEECSSHHHHHHHHHHHHHTTC
T ss_pred             EEEEeC--CHHHHHHHHHhccCCEEeeccCCCeEEEEeCCCeEEEEEEECCCCCeEEEEEEECCHHHHHHHHHHHHHCCC
Confidence            455566  9999999999999987765 2 3333332111 0000  0111113457888886   79999999999998


Q ss_pred             ee------------eceEEEEECCCCCeEEEecc
Q 044588           87 WA------------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        87 ~v------------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++            +.+.++++||+||.|+|.+.
T Consensus        88 ~~~~~p~~~~~~~~~~~~~~~~DPdG~~iel~~~  121 (305)
T 2wl9_A           88 PFEVASDADAAERRVLGLVKLHDPGGNPTEIFYG  121 (305)
T ss_dssp             CCEECCHHHHHHTTEEEEEEEECTTCCEEEEEEE
T ss_pred             ceEeCCcccccccCcEEEEEEECCCCCEEEEEEC
Confidence            86            13567999999999999876

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.16  E-value=4.1e-10  Score=81.84  Aligned_cols=98  Identities=7%  Similarity=-0.039  Sum_probs=66.3

Q ss_pred             CCcce-eEEEEecCCCHHHHHHHHHhhhCeEEEE-c-CeEEEEec-CCCCCcc-ccCCCcc-eEEEEEeC---CHHHHHH
Q 044588            9 NFMGM-KPQLLVEESKATNVVQFYKTTSGAQLEI-A-GSTFLVSN-FSNDSAA-AKNMGIG-CVLCLEID---DVEAALA   79 (117)
Q Consensus         9 ~~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l~~-~-~~~l~~~~-~~~~g~~-~~~~~~~-~~l~l~v~---dvd~~~~   79 (117)
                      +++++ ...|.|+  |+++|++||+++||.++.. . +..+.+.. ....... ......+ .++.|.|+   |++++++
T Consensus         2 ~i~~i~hv~l~v~--Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~v~~~~dl~~~~~   79 (300)
T 2zyq_A            2 SIRSLGYLRIEAT--DMAAWREYGLKVLGMVEGKGAPEGALYLRMDDFPARLVVVPGEHDRLLEAGWECANAEGLQEIRN   79 (300)
T ss_dssp             CCCEEEEEEEEES--CHHHHHHHHHHTSCCEECSSCCSSCEEEESSSSSCSEEEEECSSCEEEEEEEECSSHHHHHHHHH
T ss_pred             CcceEEEEEEEeC--CHHHHHHHHHHccCCEEeccCCCCeEEEEeCCCcEEEEEecCCCCCcceEEEEeCCHHHHHHHHH
Confidence            34444 3566777  9999999999999987754 2 22333321 1110000 0111133 47888886   4889999


Q ss_pred             HHHhCCCee------------eceEEEEECCCCCeEEEecc
Q 044588           80 KAMSGGVWA------------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        80 ~~~~~G~~v------------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++.++|+++            +.+.++++||+||.|+|++.
T Consensus        80 ~l~~~G~~~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~  120 (300)
T 2zyq_A           80 RLDLEGTPYKEATAAELADRRVDEMIRFADPSGNCLEVFHG  120 (300)
T ss_dssp             HHHHHTCCCEECCHHHHHHHTCSEEEEEECTTCCEEEEEEC
T ss_pred             HHHHcCCeEEeCChhhcccccceEEEEEECCCCCEEEEEEc
Confidence            999999876            24677999999999999987

>1mpy_A Catechol 2,3-dioxygenase; extradiol dioxygenase, non heme iron dioxygenase, metapyrocatechase, oxidoreductase; 2.80A {Pseudomonas putida} SCOP: d.32.1.3 d.32.1.3

Probab=99.15  E-value=6.9e-10  Score=80.86  Aligned_cols=94  Identities=12%  Similarity=0.100  Sum_probs=64.0

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE----c-CeEEE--EecCCC-CCc--ccc-CCCcceEEEEEeC---CHHHHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI----A-GSTFL--VSNFSN-DSA--AAK-NMGIGCVLCLEID---DVEAALA   79 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~----~-~~~l~--~~~~~~-~g~--~~~-~~~~~~~l~l~v~---dvd~~~~   79 (117)
                      ...|.++  |++++++||+++||.++..    + +..+.  +..... ...  ... ..+...+++|.|+   |++++++
T Consensus       153 hv~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~hi~f~v~d~~dv~~~~~  230 (307)
T 1mpy_A          153 HALMYGD--ELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLETWEDLLRAAD  230 (307)
T ss_dssp             EEEEEES--CHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECSSSSEEEEEEEECSCHHHHHHHHH
T ss_pred             eEEEEcC--CHHHHHHHHHHHcCCeeEeeeecCCCcEEEEEEEcCCCceeEEEecCCCCCcceEEEEEcCCHHHHHHHHH
Confidence            4456667  9999999999999966542    1 21332  221111 110  011 1223478999999   6778899


Q ss_pred             HHHhCCCee-------e---ceEEEEECCCCCeEEEeccc
Q 044588           80 KAMSGGVWA-------T---GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        80 ~~~~~G~~v-------g---~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++.++|+++       +   .+.++++||+||.|+|.+..
T Consensus       231 ~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iel~~~~  270 (307)
T 1mpy_A          231 LISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGG  270 (307)
T ss_dssp             HHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECC
T ss_pred             HHHHCCCceeeCCccCCCCCceEEEEECCCCcEEEEEecc
Confidence            999999986       1   46789999999999999864

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=99.13  E-value=5.3e-10  Score=80.95  Aligned_cols=94  Identities=19%  Similarity=0.127  Sum_probs=65.0

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCC-CCCcc--ccCCCcceEEEEEeC---CHHHHHHHHHhCCCe
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFS-NDSAA--AKNMGIGCVLCLEID---DVEAALAKAMSGGVW   87 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~-~~g~~--~~~~~~~~~l~l~v~---dvd~~~~~~~~~G~~   87 (117)
                      ..|.|+  |++++.+||+++||.++... +..+.+.... .....  ........++.|.|+   |++++++++.++|++
T Consensus         8 v~l~v~--Dl~~a~~FY~~~lG~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~f~v~~~~dl~~~~~~l~~~G~~   85 (292)
T 1kw3_B            8 LGFAVK--DVPAWDHFLTKSVGLMAAGSAGDAALYRADQRAWRIAVQPGELDDLAYAGLEVDDAAALERMADKLRQAGVA   85 (292)
T ss_dssp             EEEEES--CHHHHHHHHHHTTCCEEEEEETTEEEEESSSBSCSEEEEECTTCEEEEEEEECSSHHHHHHHHHHHHHHTCC
T ss_pred             EEEEeC--CHHHHHHHHHhcCCCEEeecCCCeEEEEcCCceEEEEEccCCCCCccEEEEEECCHHHHHHHHHHHHHcCCe
Confidence            356666  99999999999999776532 3333333111 11110  111112347889998   999999999999987


Q ss_pred             e------------eceEEEEECCCCCeEEEecccC
Q 044588           88 A------------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        88 v------------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +            +.+..+++||+||.|+|++...
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~DPdG~~iel~~~~~  120 (292)
T 1kw3_B           86 FTRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGPA  120 (292)
T ss_dssp             CEECCHHHHHHHTCSEEEEEECTTSCEEEEEECCC
T ss_pred             EeecCcccccccCceEEEEEECCCCCEEEEEECcc
Confidence            6            2467789999999999998654

>3lm4_A Catechol 2,3-dioxygenase; NYSGXRC, PSI-II, protein structure initiative, 2hydroxyl 6 OXO 6 phenyl hexa 2-4 dienoic acid, peroxide; HET: HPX; 1.80A {Rhodococcus jostii}

Probab=99.13  E-value=1.1e-09  Score=81.59  Aligned_cols=93  Identities=13%  Similarity=0.067  Sum_probs=63.5

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE----cCeEE--EEe-cCCCCCc--c---ccCCCcceEEEEEeCC---HHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI----AGSTF--LVS-NFSNDSA--A---AKNMGIGCVLCLEIDD---VEAALA   79 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~----~~~~l--~~~-~~~~~g~--~---~~~~~~~~~l~l~v~d---vd~~~~   79 (117)
                      ..|.++  |++++.+||+++||.++.-    ++...  .+. +......  .   ....+.-.+++|.|+|   ++++++
T Consensus       157 v~l~v~--D~~~a~~FY~~vLG~~~~~~~~~~g~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~Hiaf~v~d~~~v~~~~~  234 (339)
T 3lm4_A          157 LNLMSS--DVTAVKDSFERHLGFRTTERVVDGNVEIGAWMSSNLLGHEVACMRDMTGGHGKLHHLAFFYGTGQHNIDAVE  234 (339)
T ss_dssp             EEEEES--CHHHHHHHHHHHHCCEEEEEEEETTEEEEEEEESSSSSCSEEEEECTTSCCSEEEEEEEECCCHHHHHHHHH
T ss_pred             EEEEcC--CHHHHHHHHHHhCCCeEEEEEecCCcEEEEEEEeCCCceEEEEeccCCCCCCceeEEEEEeCCHHHHHHHHH
Confidence            345666  9999999999999965432    22211  121 1111110  0   1112245689999998   888999


Q ss_pred             HHHhCCCee----------eceEEEEECCCCCeEEEeccc
Q 044588           80 KAMSGGVWA----------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        80 ~~~~~G~~v----------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++.++|+++          +.++++++||+||.|+|++..
T Consensus       235 ~l~~~G~~i~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  274 (339)
T 3lm4_A          235 MFRDYDIQIEAGPDKHGITQSQFLYVFEPGGNRIELFGEA  274 (339)
T ss_dssp             HHHHTTCEEEEEEEEETGGGEEEEEEECTTSCEEEEECCC
T ss_pred             HHHHCCCeEEeCCcccccCCceEEEEEcCCCCEEEEEEcC
Confidence            999999987          246799999999999998654

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.12  E-value=4.1e-10  Score=83.80  Aligned_cols=93  Identities=10%  Similarity=0.030  Sum_probs=60.3

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE--cCe-EEEEe-cCCC-------CCccccCCCcceEEEEEe--CCHHHHHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI--AGS-TFLVS-NFSN-------DSAAAKNMGIGCVLCLEI--DDVEAALAKA   81 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~--~~~-~l~~~-~~~~-------~g~~~~~~~~~~~l~l~v--~dvd~~~~~~   81 (117)
                      ..|.|.  |++++.+||+++||.++..  ... ...+. ....       ...+........+++|.|  +|++++++++
T Consensus       163 v~L~v~--Dl~~a~~FY~~vLG~~~~~~~~~~~~~~l~~g~~~~~l~l~~~~~~~~~~~~~~hiaf~v~~~dld~~~~rl  240 (330)
T 3zi1_A          163 VTLAVS--DLQKSLNYWCNLLGMKIYENDEEKQRALLGYADNQCKLELQGVKGGVDHAAAFGRIAFSCPQKELPDLEDLM  240 (330)
T ss_dssp             EEEEES--CHHHHHHHHHHTTCCEEEEEETTTTEEEEESSTTSCEEEEEECSSCCCCBTTCCEEEEEECGGGHHHHHHHH
T ss_pred             EEEECC--CHHHHHHHHHHhcCCEEEeeccCCcEEEEEeCCceEEEEECCCCCCCCCCCCCceEEEEEEcccHHHHHHHH
Confidence            455566  9999999999999966543  111 11121 1100       000000111223577777  4899999999


Q ss_pred             HhCCCee-------------eceEEEEECCCCCeEEEeccc
Q 044588           82 MSGGVWA-------------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        82 ~~~G~~v-------------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .++|+++             |.+.++|+||+||.|+|++..
T Consensus       241 ~~~G~~i~~~~~~~~~pg~~g~~~~~f~DPdG~~iEl~~~~  281 (330)
T 3zi1_A          241 KRENQKILTPLVSLDTPGKATVQVVILADPDGHEICFVGDE  281 (330)
T ss_dssp             HHTTCEEEEEEEEECCTTSCCEEEEEEECTTCCEEEEEEHH
T ss_pred             HHcCCcEecCceecccCCCCceEEEEEECCCCCEEEEEEec
Confidence            9999986             125789999999999998753

>2zyq_A Probable biphenyl-2,3-DIOL 1,2-dioxygenase BPHC; extradiol, DHSA, TB, catechol, cholesterol, steroid, aromatic hydrocarbons catabolism; HET: TAR; 2.00A {Mycobacterium tuberculosis} PDB: 2zi8_A*

Probab=99.10  E-value=2.5e-09  Score=77.61  Aligned_cols=94  Identities=18%  Similarity=0.190  Sum_probs=62.3

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE----c---------C--eEEEEecCCC--CC--ccccCCCcc-eEEEEEeCCH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI----A---------G--STFLVSNFSN--DS--AAAKNMGIG-CVLCLEIDDV   74 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~----~---------~--~~l~~~~~~~--~g--~~~~~~~~~-~~l~l~v~dv   74 (117)
                      ..|.++  |++++++||+++||.++..    .         +  ....+.....  ..  ....+...+ .+++|.|+|+
T Consensus       146 v~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~h~af~v~d~  223 (300)
T 2zyq_A          146 VVLSTR--DDAEALHFYRDVLGFRLRDSMRLPPQMVGRPADGPPAWLRFFGCNPRHHSLAFLPMPTSSGIVHLMVEVEQA  223 (300)
T ss_dssp             EEEECS--CHHHHHHHHHTTTCCEEEEEEEECGGGGTCCTTSCCEEEEEEESSSBSCSEEEESSCCSSSEEEEEEEBSSH
T ss_pred             EEEEeC--CHHHHHHHHHHhcCCEEeeeecccccccccCCCCCceEEEEEEECCCccEEEEecCCCCCCceEEEEEeCCH
Confidence            345666  9999999999999976531    1         1  1222211111  00  001111133 5899999986


Q ss_pred             HH---HHHHHHhCCCee---------e-ceEEEEECCCCCeEEEecccC
Q 044588           75 EA---ALAKAMSGGVWA---------T-GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        75 d~---~~~~~~~~G~~v---------g-~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++   +++++.++|+++         + .++++++||+||.|+|++...
T Consensus       224 ~~v~~~~~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (300)
T 2zyq_A          224 DDVGLCLDRALRRKVPMSATLGRHVNDLMLSFYMKTPGGFDIEFGCEGR  272 (300)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEEEEESSSCCEEEEEECTTSSEEEEEECCC
T ss_pred             HHHHHHHHHHHHCCCceeecccccCCCCeEEEEEECCCCCEEEEEeCCe
Confidence            55   699999999977         1 567899999999999997653

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=99.09  E-value=4.2e-09  Score=79.69  Aligned_cols=99  Identities=18%  Similarity=0.304  Sum_probs=66.6

Q ss_pred             Ccce-eEEEEecCCCHHHHHHHHHhhhCeEEEE-cCeEEEEecCCC---CCcc-ccCCCcc-eEEEEEeC---CHHHHHH
Q 044588           10 FMGM-KPQLLVEESKATNVVQFYKTTSGAQLEI-AGSTFLVSNFSN---DSAA-AKNMGIG-CVLCLEID---DVEAALA   79 (117)
Q Consensus        10 ~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l~~-~~~~l~~~~~~~---~g~~-~~~~~~~-~~l~l~v~---dvd~~~~   79 (117)
                      .+++ ...|.|+  |++++++||+++||.++.- .+..+.+.....   .... ......+ .++.+.|.   |++++.+
T Consensus        15 I~rl~hV~l~V~--DLe~s~~FY~dvLGL~~~~~~~~~~~lr~~~~~~~~~l~l~~~~~~gl~~~a~~v~s~~dLd~~~~   92 (365)
T 4ghg_A           15 ILRCAYAELVVT--DLAKSRNFYVDVLGLHVSYEDENQIYLRSFEEFIHHNLVLTKGPVAALKAMAFRVRTPEDVDKAEA   92 (365)
T ss_dssp             EEEEEEEEEEES--CHHHHHHHHTTTTCCEEEEECSSEEEEECTTCCSSCSEEEEECSSCEEEEEEEEESSHHHHHHHHH
T ss_pred             CCEEEEEEEEeC--CHHHHHHHHhhCCCCEEEEEcCCEEEEEeCCCCcceEEEeccCCCCCcceEEEEeCCHHHHHHHHH
Confidence            3444 3456666  9999999999999976643 345555532211   1111 0111133 36778776   5788999


Q ss_pred             HHHhCCCee----------eceEEEEECCCCCeEEEecccC
Q 044588           80 KAMSGGVWA----------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        80 ~~~~~G~~v----------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++.++|+++          +.+..+|+||+||.++|+...+
T Consensus        93 ~L~~~Gv~v~~~~~~~~~~~g~~~~f~DPdG~~iEl~~~~~  133 (365)
T 4ghg_A           93 YYQELGCRTERRKDGFVKGIGDALRVEDPLGFPYEFFFETT  133 (365)
T ss_dssp             HHHHTTCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBC
T ss_pred             HHHHcCCcceeccccccCCCceEEEEECCCCCEEEEEEEee
Confidence            999999877          3567899999999999986543

>3hpy_A Catechol 2,3-dioxygenase; repeated motifs, aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.94A {Pseudomonas SP} PDB: 3hpv_A 3hq0_A*

Probab=99.08  E-value=3.3e-09  Score=77.50  Aligned_cols=92  Identities=14%  Similarity=0.019  Sum_probs=61.6

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE----c--C-eEEEEecCCC--CCc--c-ccCCCcceEEEEEeCCHH---HHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI----A--G-STFLVSNFSN--DSA--A-AKNMGIGCVLCLEIDDVE---AALAK   80 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~----~--~-~~l~~~~~~~--~g~--~-~~~~~~~~~l~l~v~dvd---~~~~~   80 (117)
                      .|.++  |++++.+||+++||.++.-    .  + ..+.+.....  ...  . .+..+...+++|.|+|++   +++++
T Consensus       156 ~l~v~--D~~~~~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Hiaf~v~d~~~v~~~~~~  233 (309)
T 3hpy_A          156 LLYGP--NIAEVQKIFTEVLGFYLVERVLSPDGDSDMGIWLSCSHKVHDIAFVEYPEKGKLHHCSFLLESWEQVLRAGDI  233 (309)
T ss_dssp             EEEES--CHHHHHHHHHHTSCCEEEEEEECSSSCSEEEEEEESSSSSCSEEEEECSSTTEEEEEEEECSSHHHHHHHHHH
T ss_pred             EEEeC--CHHHHHHHHHHhcCCEEEEEEecCCCCceEEEEEecCCCceeEEEecCCCCCceeEEEEECCCHHHHHHHHHH
Confidence            45666  9999999999999965532    1  1 2222221111  110  0 111223568999998765   56899


Q ss_pred             HHhCCCee----------eceEEEEECCCCCeEEEeccc
Q 044588           81 AMSGGVWA----------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        81 ~~~~G~~v----------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +.++|+++          +.++++++||+||.|+|+...
T Consensus       234 l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~g  272 (309)
T 3hpy_A          234 MSMNEVNVDIGPTRHGVTRGCTIYAWDPSGNRFETFMGG  272 (309)
T ss_dssp             HHHTTCCBSSCSEECSSSSEEEEEEECTTSCEEEEEEEC
T ss_pred             HHHCCCEEEeCCccCCCCccEEEEEECCCCCEEEEEeCC
Confidence            99999987          246789999999999998763

>3pkv_A Toxoflavin lyase (TFLA); metalloenzyme, vicinal oxygen chelate superfamily; 1.34A {Paenibacillus polymyxa} PDB: 3pkw_A 3pkx_A* 3oul_A 3oum_A*

Probab=99.08  E-value=1.8e-09  Score=78.08  Aligned_cols=88  Identities=14%  Similarity=0.112  Sum_probs=60.2

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCe----------EEEEcCeEEEEecCCCCCccccCCCcceEEEEE--eCCHHHHHHHH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGA----------QLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLE--IDDVEAALAKA   81 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~----------~l~~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~--v~dvd~~~~~~   81 (117)
                      ...|.+.  |++++.+||+++||.          .|..++..+.+.....  .   .. ...++.|.  .++++++++++
T Consensus        29 hV~L~V~--Dle~s~~FY~~vLGl~~~~~~~~~~~L~~g~~~l~l~~~~~--~---~~-~~~hiaf~V~~~dld~~~~rL  100 (252)
T 3pkv_A           29 QLTLYTA--ELDRMLAFYTNMLGAQHVHEQADAFTIQLGVSQIQFRAAAD--G---TK-PFYHIAINIAANHFQEGKAWL  100 (252)
T ss_dssp             EEEEEES--CHHHHHHHHHHHHCGGGEEECSSEEEEEETTEEEEEEECCT--T---CC-CCCEEEEEECTTCHHHHHHHH
T ss_pred             EEEEEeC--CHHHHHHHHHHhcCCEEEEccCCEEEEEeCCEEEEEEECCC--C---CC-CeeEEEEEecHHHHHHHHHHH
Confidence            3355566  999999999999992          3444444444443211  0   11 22345554  45799999999


Q ss_pred             HhCCCee--------------eceEEEEECCCCCeEEEecccC
Q 044588           82 MSGGVWA--------------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        82 ~~~G~~v--------------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      .++ +++              +.+..+|+||+||.|+|++...
T Consensus       101 ~~~-v~~~~~~~~~~~~~~~~g~~~~~f~DPdGn~iEl~~~~~  142 (252)
T 3pkv_A          101 SGF-GELLTENDEDQAYFPFFNAYSCYVEDPSGNIIELISRQQ  142 (252)
T ss_dssp             TTS-SCCCCBTTBSCEEETTTTEEEEEEECTTCCEEEEEEESS
T ss_pred             Hhc-ceEeccCCccccccccCCeEEEEEECCCCCEEEEEEeCC
Confidence            887 665              2467899999999999998654

>2wl9_A Catechol 2,3-dioxygenase; aromatic hydrocarbons catabolism, iron, oxidoreductase; 1.90A {Rhodococcus SP} PDB: 2wl3_A

Probab=99.06  E-value=3.1e-09  Score=77.48  Aligned_cols=92  Identities=14%  Similarity=0.075  Sum_probs=60.3

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE-------cC--eEE-EEe-cCCCCCc--cccC-CCcceEEEEEeCC---HHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI-------AG--STF-LVS-NFSNDSA--AAKN-MGIGCVLCLEIDD---VEAA   77 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~-------~~--~~l-~~~-~~~~~g~--~~~~-~~~~~~l~l~v~d---vd~~   77 (117)
                      ..|.++  |+++|++|| ++||.++.-       .+  ... .+. .......  .... .+...+++|.|+|   ++++
T Consensus       150 v~l~v~--D~~~s~~FY-~vLG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hiaf~v~d~~~v~~~  226 (305)
T 2wl9_A          150 IIIRED--DVEEATRFY-RLLGLEGAVEYKFALPNGAVGTPVFMHCNDRHHSLAFGVGPMDKRINHLMIEYTHLDDLGYA  226 (305)
T ss_dssp             EEECCS--CHHHHHHHH-HHHTCEEEECBCEECTTSCEECCEEEESSSSSCSEEECCSCCSSSEEEEEEEESSHHHHHHH
T ss_pred             EEEECC--CHHHHHHHH-HHcCCeeeeeEecccCCCccceEEEEEcCCCceEEEEecCCCCCCceEEEEEcCCHHHHHHH
Confidence            345555  999999999 999976641       11  111 222 1111110  0011 1123579999988   6678


Q ss_pred             HHHHHhCCCee--e--------ceEEEEECCCCCeEEEeccc
Q 044588           78 LAKAMSGGVWA--T--------GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        78 ~~~~~~~G~~v--g--------~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++++.++|+++  +        .++++++||+||.|+|++..
T Consensus       227 ~~~l~~~G~~~~~~p~~~~~~~~~~~y~~DPdG~~iEl~~~~  268 (305)
T 2wl9_A          227 HDLVRQQKIDVTLQIGKHSNDEALTFYCANPSGWLWEPGWGS  268 (305)
T ss_dssp             HHHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECC
T ss_pred             HHHHHHcCCCccccCcccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            99999999987  1        35679999999999999865

>1lgt_A Biphenyl-2,3-DIOL 1,2-dioxygenase; extradiol dioxygenase, 2,3-dihydroxybiphenyl, non-heme iron, anaerobic, PCB biodegradation; HET: BP3; 1.70A {Burkholderia xenovorans} SCOP: d.32.1.3 d.32.1.3 PDB: 1kmy_A* 1knd_A 1knf_A 1han_A* 1lkd_A*

Probab=99.06  E-value=3.4e-09  Score=76.84  Aligned_cols=92  Identities=14%  Similarity=0.009  Sum_probs=60.1

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE----c---C--eEEEEe--cCCCC--Cccc-cCCCcceEEEEEeCCHHHHH--
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI----A---G--STFLVS--NFSND--SAAA-KNMGIGCVLCLEIDDVEAAL--   78 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~----~---~--~~l~~~--~~~~~--g~~~-~~~~~~~~l~l~v~dvd~~~--   78 (117)
                      ..|.++  |++++++||+++||.++..    .   +  ....+.  +....  +... +..+...+++|.|+|++++.  
T Consensus       146 v~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~hiaf~v~d~~~~~~~  223 (297)
T 1lgt_A          146 FVRCVP--DSDKALAFYTDVLGFQLSDVIDMKMGPDVTVPAYFLHCNERHHTLAIAAFPLPKRIHHFMLEVASLDDVGFA  223 (297)
T ss_dssp             EEEECS--CHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCCCSSSEEEEEEEBSCHHHHHHH
T ss_pred             EEEecC--CHHHHHHHHHHhcCCeeeeEEeccCCCCccceEEEEEeCCCcceEEEEcCCCCCCceEEEEeCCCHHHHHHH
Confidence            355666  9999999999999966531    1   1  122222  11100  0000 11112357999999987765  


Q ss_pred             -HHHHhCCCee---------e-ceEEEEECCCCCeEEEeccc
Q 044588           79 -AKAMSGGVWA---------T-GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        79 -~~~~~~G~~v---------g-~r~~~v~DP~G~~w~l~~~~  109 (117)
                       ++ .++|+++         | .++++++||+||.|+|++..
T Consensus       224 ~~~-~~~G~~~~~~p~~~~~g~~~~~~~~DPdG~~iel~~~~  264 (297)
T 1lgt_A          224 FDR-VDADGLITSTLGRHTNDHMVSFYASTPSGVEVEYGWSA  264 (297)
T ss_dssp             HHH-HHTTTCEEEEEEEESSSCCEEEEEECTTSCEEEEEECC
T ss_pred             HHH-HhCCCcccccCcccCCCCcEEEEEECCCCcEEEEecCC
Confidence             89 9999987         1 23479999999999999865

>3b59_A Glyoxalase/bleomycin resistance protein/dioxygena; 11004Z, NYSGXRC, PSI-2, structural genomics, Pro structure initiative; 2.53A {Novosphingobium aromaticivorans}

Probab=99.06  E-value=3.6e-09  Score=77.74  Aligned_cols=94  Identities=13%  Similarity=0.112  Sum_probs=63.8

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE--cCeEEEEe-cCCCCCcc-ccCCCcceEEEEEeCCHHHH---HHHHHhCCCe
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI--AGSTFLVS-NFSNDSAA-AKNMGIGCVLCLEIDDVEAA---LAKAMSGGVW   87 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~--~~~~l~~~-~~~~~g~~-~~~~~~~~~l~l~v~dvd~~---~~~~~~~G~~   87 (117)
                      ..|.++  |++++.+||+++||.++..  ++....+. +....... ...+..-.+++|.|+|++++   ++++.++|++
T Consensus       145 v~l~v~--D~~~a~~FY~~~LG~~~~~~~~~~~~fl~~~~~~~~l~l~~~~~g~~hi~f~v~d~d~~~~~~~~l~~~G~~  222 (310)
T 3b59_A          145 IVLHSP--NHQDMVKFFTDVLGFKVSDWLGDFMCFLRCNSAHHRIAILPGPPCLNHVAYDMLSVDDMMRGAHRLKVKGID  222 (310)
T ss_dssp             EEEEET--THHHHHHHHHHTSCCEEEEEETTTEEEEESSSBSCSEEEEESSSEEEEEEEECSSHHHHHHHHHHHHHTTCC
T ss_pred             EEEecC--CHHHHHHHHHhCCCCEEEEeeCCeEEEEecCCCcceEEEECCCCceEEEEEEcCCHHHHHHHHHHHHHcCCc
Confidence            345666  9999999999999976642  33222222 11111100 00111335799999998766   9999999997


Q ss_pred             e----------eceEEEEECCCCCeEEEecccC
Q 044588           88 A----------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        88 v----------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +          +.++++++||+||.|++.+...
T Consensus       223 ~~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~~  255 (310)
T 3b59_A          223 IGWGPGRHTAGNNTFSYFVTPGGFVTEYTSELE  255 (310)
T ss_dssp             CSEEEEECSTTCCEEEEEECTTSCEEEEEECCC
T ss_pred             eeecCccccCCCcEEEEEECCCCCEEEEEeCcc
Confidence            7          1357899999999999998653

>1f1u_A Homoprotocatechuate 2,3-dioxygenase; extradiol, manganese, biodegradation, aromatic, oxidoreductase; 1.50A {Arthrobacter globiformis} SCOP: d.32.1.3 d.32.1.3 PDB: 1f1r_A 1f1v_A* 1f1x_A

Probab=99.04  E-value=4.4e-09  Score=77.60  Aligned_cols=92  Identities=11%  Similarity=-0.000  Sum_probs=62.1

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE----c-Ce-EEEEecCCC--CCcc--ccCCCcceEEEEEeCCHHH---HHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI----A-GS-TFLVSNFSN--DSAA--AKNMGIGCVLCLEIDDVEA---ALAKA   81 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~----~-~~-~l~~~~~~~--~g~~--~~~~~~~~~l~l~v~dvd~---~~~~~   81 (117)
                      ..|.++  |++++.+|| ++||.++..    . +. .+.+.....  +...  ..+...-.+++|.|+|+++   +++++
T Consensus       156 v~l~v~--D~~~a~~FY-~~LGf~~~~~~~~~~g~~~~~f~~~~~~~~~~~~~~~~~~~~~Hiaf~v~d~d~v~~~~~~l  232 (323)
T 1f1u_A          156 FNQVTP--DVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHHVAFATHEKHNIIQICDKM  232 (323)
T ss_dssp             EEEEES--CHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESSBSEEEEEEEECSSHHHHHHHHHHH
T ss_pred             EEEecC--CHHHHHHHH-HhCCCeEEEEEEcCCCcEEEEEEEcCCCcccEEEeCCCCCCceEEEEECCCHHHHHHHHHHH
Confidence            345666  999999999 999966532    1 11 222222111  1110  1111133579999999988   99999


Q ss_pred             HhCCC--ee----------eceEEEEECCCCCeEEEeccc
Q 044588           82 MSGGV--WA----------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        82 ~~~G~--~v----------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .++|+  ++          +.++++++||+||.|++.+..
T Consensus       233 ~~~G~~~~i~~~p~~~~~~~~~~~y~~DPdG~~iE~~~~~  272 (323)
T 1f1u_A          233 GALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQD  272 (323)
T ss_dssp             HHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECC
T ss_pred             HHCCCccccccCCCccCCCCcEEEEEECCCCCEEEEEeCC
Confidence            99999  66          246789999999999998643

>3zi1_A Glyoxalase domain-containing protein 4; isomerase; 1.90A {Homo sapiens}

Probab=99.03  E-value=3.4e-09  Score=78.85  Aligned_cols=92  Identities=11%  Similarity=0.125  Sum_probs=59.8

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEE----EcC------------e-EEEEe--c-CCCC---------CccccCCCcc
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLE----IAG------------S-TFLVS--N-FSND---------SAAAKNMGIG   64 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~----~~~------------~-~l~~~--~-~~~~---------g~~~~~~~~~   64 (117)
                      ...|.|.  |++++++||+++||.++.    ..+            . .+.+.  . ....         +......+++
T Consensus        30 Hv~l~V~--Dle~s~~FY~~vLGl~~~~~~~~~~~~~a~~~g~~~~~~~~~~l~~~~~~~~~~leL~~~~~~~~~~~~~g  107 (330)
T 3zi1_A           30 HFVFKVG--NRFQTARFYRDVLGMKVLRHEEFEEGCKAACNGPYDGKWSKTMVGFGPEDDHFVAELTYNYGVGDYKLGND  107 (330)
T ss_dssp             EEEEECS--CHHHHHHHHHHTSCCEEEEEEEEC---------CCCSCEEEEEEESSCTTTCCEEEEEEETTCCCCCBCSS
T ss_pred             EEEEEeC--CHHHHHHHHHHhcCCeEEEEeecchhhhhhccCCcCCceEEEEEecCCCCCccEEEEeccCCCCccccCCC
Confidence            4456666  999999999999996542    110            0 12221  1 0000         0001111234


Q ss_pred             -eEEEEEeCCHHHHHHHHHhCCCee---eceEEEEECCCCCeEEEecccC
Q 044588           65 -CVLCLEIDDVEAALAKAMSGGVWA---TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        65 -~~l~l~v~dvd~~~~~~~~~G~~v---g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                       .+|+|.|+|+   ++++.++|+++   ..+.++++||+||.|+|++...
T Consensus       108 ~~hiaf~V~d~---~~~l~~~G~~~~~~~~~~~~~~DPdG~~iel~~~~~  154 (330)
T 3zi1_A          108 FMGITLASSQA---VSNARKLEWPLTEVAEGVFETEAPGGYKFYLQNRSL  154 (330)
T ss_dssp             EEEEEEECHHH---HHHHHHHTCCCEEEETTEEEEECTTSCEEEEESSCC
T ss_pred             eeEEEEECchH---HHHHHHcCCceeccCCceEEEECCCCCEEEEEecCC
Confidence             5899999987   56677789888   4568899999999999998754

>2ehz_A 1,2-dihydroxynaphthalene dioxygenase; extradiol dioxygenase, protein substrate complex, oxidoreduc; 1.35A {Pseudomonas SP} PDB: 2ei0_A* 2ei1_A* 2ei3_A* 2ei2_A

Probab=99.02  E-value=1.1e-08  Score=74.47  Aligned_cols=92  Identities=15%  Similarity=0.048  Sum_probs=59.5

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE----Ec---C--eEEEEecCCC--CCcc--ccC-CCcceEEEEEeCCHH---HHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE----IA---G--STFLVSNFSN--DSAA--AKN-MGIGCVLCLEIDDVE---AAL   78 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~----~~---~--~~l~~~~~~~--~g~~--~~~-~~~~~~l~l~v~dvd---~~~   78 (117)
                      .|.++  |+++|++|| ++||.++.    .+   +  ..+.+.....  ....  ..+ ++...+++|.|+|++   +++
T Consensus       154 ~l~v~--D~~~a~~FY-~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hiaf~v~d~~~v~~~~  230 (302)
T 2ehz_A          154 IVRQT--DVAEAHKFY-SLLGFRGDVEYRIPLPNGMTAELSFMHCNARDHSIAFGAMPAAKRLNHLMLEYTHMEDLGYTH  230 (302)
T ss_dssp             EECCS--CHHHHHHHH-HHTTCBCCEEEEEECTTSCEEEEEEEBSSSBSCSEEECSCCCSSSEEEEEEEESSHHHHHHHH
T ss_pred             EEEcC--CHHHHHHHH-HhcCCeeeeEEeccCCCCcceEEEEEEeCCCCcEEEEecCCCCCceeEEEEEcCCHHHHHHHH
Confidence            45555  999999999 99995432    11   2  2222222111  1000  011 112357999998876   567


Q ss_pred             HHHHhCCCee----------eceEEEEECCCCCeEEEecccC
Q 044588           79 AKAMSGGVWA----------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        79 ~~~~~~G~~v----------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +++.++|+++          +.++++++||+||.|+|++...
T Consensus       231 ~~l~~~G~~~~~~p~~~~~~~~~~~~~~DPdG~~iEl~~~~~  272 (302)
T 2ehz_A          231 QQFVKNEIDIALQLGIHANDKALTFYGATPSGWLIEPGWRGA  272 (302)
T ss_dssp             HHHHHTTCCEEEEEEECTTTCCEEEEEECTTSSEEEEEECCC
T ss_pred             HHHHHCCCcEEeCCcccCCCCceEEEEECCCCcEEEEEECce
Confidence            8999999987          1356899999999999988654

>1kw3_B 2,3-dihydroxybiphenyl dioxygenase; four TIME repetitions of the beta-alpha-beta-BETA-beta motif oxidoreductase; 1.45A {Pseudomonas SP} SCOP: d.32.1.3 d.32.1.3 PDB: 1dhy_A 1eiq_A 1eir_A* 1eil_A 1kw6_B* 1kw8_B* 1kw9_B* 1kwb_B 1kwc_B*

Probab=98.95  E-value=1.3e-08  Score=73.55  Aligned_cols=92  Identities=11%  Similarity=-0.046  Sum_probs=59.5

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE----c---C--eEEEEecCCC--CCc--cccC-CCcceEEEEEeCCHH---HH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI----A---G--STFLVSNFSN--DSA--AAKN-MGIGCVLCLEIDDVE---AA   77 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~----~---~--~~l~~~~~~~--~g~--~~~~-~~~~~~l~l~v~dvd---~~   77 (117)
                      ..|.|+  |++++++||+++||.++..    +   +  ..+.+.....  ...  ...+ .+...+++|.|+|++   ++
T Consensus       146 v~l~v~--D~~~a~~FY~~~lG~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~hiaf~v~d~~~v~~~  223 (292)
T 1kw3_B          146 FVRCVP--DTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPIPKRIHHFMLQANTIDDVGYA  223 (292)
T ss_dssp             EEEECS--CHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSCSSSEEEEEEEBSSHHHHHHH
T ss_pred             EEEecC--CHHHHHHHHHhccCCEEeeeeecccCCCccceEEEEEECCCcceEEEecCCCCCceEEEEEEcCCHHHHHHH
Confidence            345666  9999999999999966531    1   1  1222211111  100  0011 113357999999865   46


Q ss_pred             HHHHHhCCCee---------e-ceEEEEECCCCC-eEEEeccc
Q 044588           78 LAKAMSGGVWA---------T-GRVGKVKDPCGF-TWLIYSPV  109 (117)
Q Consensus        78 ~~~~~~~G~~v---------g-~r~~~v~DP~G~-~w~l~~~~  109 (117)
                      ++++. +|+++         | .+.++++||+|| .|+|++..
T Consensus       224 ~~~l~-~G~~~~~~p~~~~~~~~~~~y~~DPdG~~~iEl~~~~  265 (292)
T 1kw3_B          224 FDRLD-AAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  265 (292)
T ss_dssp             HHHHH-HTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             HHHHh-CCCceeecCcccCCCCeEEEEEECCCCCeeEEEEECC
Confidence            78998 89877         1 345799999999 99999865

>3oaj_A Putative ring-cleaving dioxygenase MHQO; structural genomics, protein structure initiative, PSI-biolo unknown function; 1.40A {Bacillus subtilis subsp}

Probab=98.92  E-value=2e-08  Score=75.07  Aligned_cols=90  Identities=12%  Similarity=0.039  Sum_probs=60.3

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE-cCeE-----------EEEecCCCCCccccCCC-cce-EEEEEeCC---HHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI-AGST-----------FLVSNFSNDSAAAKNMG-IGC-VLCLEIDD---VEAAL   78 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~-~~~~-----------l~~~~~~~~g~~~~~~~-~~~-~l~l~v~d---vd~~~   78 (117)
                      .|.|.  |++++.+||+++||.++.. .+..           +.+... + +.+...++ .++ +++|.|+|   ++++.
T Consensus       158 ~L~v~--Dle~t~~FY~~vLG~~~~~~~~~~~~~~~g~~~~~l~l~~~-~-~~~~~~~g~g~~~HiAf~v~d~~~l~~~~  233 (335)
T 3oaj_A          158 TLLSE--QPDKTADLLENIMGLERVGKEGDFVRYRSAGDIGNVIDLKL-T-PIGRGQMGAGTVHHIAWRANDDEDQLDWQ  233 (335)
T ss_dssp             EEECS--SHHHHHHHHHHTSCCEEEEEETTEEEEECSSSSSCEEEEES-S-CCCBCBCSBTEEEEEEEEESSHHHHHHHH
T ss_pred             EEEEC--CHHHHHHHHHHHhCCEEeeccCCEEEEEeCCCCcEEEEEeC-C-CCCcCCCCCcceEEEEEEcCCHHHHHHHH
Confidence            45666  9999999999999955432 1212           222111 1 11111122 234 69999987   56789


Q ss_pred             HHHHhCCCee-------eceEEEEECCCCCeEEEeccc
Q 044588           79 AKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        79 ~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +++.++|..+       ..+-.+++||+||.|+|++..
T Consensus       234 ~~L~~~G~~~~~~~~r~~~~siYfrDP~G~~iEl~td~  271 (335)
T 3oaj_A          234 RYIASHGYGVTPVRDRNYFNAIYFREHGEILFEIATDP  271 (335)
T ss_dssp             HHHHHTTCCCCCCEECSSSEEEEEECTTSCEEEEEESC
T ss_pred             HHHHHCCCCccccccCCcEEEEEEECCCCcEEEEEeCC
Confidence            9999999877       124579999999999999863

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=98.77  E-value=1.6e-07  Score=71.20  Aligned_cols=94  Identities=18%  Similarity=0.203  Sum_probs=62.9

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc-----C---eE----------EEEecCCCCCcc----c-----cCCCcceE
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA-----G---ST----------FLVSNFSNDSAA----A-----KNMGIGCV   66 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-----~---~~----------l~~~~~~~~g~~----~-----~~~~~~~~   66 (117)
                      ...|.|+  |++++++||+++||.++...     +   ..          +.+......+.+    .     ..+..-.+
T Consensus        25 hV~i~V~--D~~~a~~FY~~~LGf~~~~~~~~~~~~~~~~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~g~gv~~  102 (381)
T 1t47_A           25 AVVFAVG--NAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGVVD  102 (381)
T ss_dssp             EEEEECS--CHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEEEE
T ss_pred             EEEEEEC--CHHHHHHHHHHcCCCEEEEEEcCCCCCceEEEEEEecCCEEEEEecCCCCCCcchhHHHHHHHhcCCceEE
Confidence            3455666  99999999999999554321     1   11          222211000111    0     00213358


Q ss_pred             EEEEeCCHHHHHHHHHhCCCee--e----------ceEEEEECCCCCeEEEeccc
Q 044588           67 LCLEIDDVEAALAKAMSGGVWA--T----------GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        67 l~l~v~dvd~~~~~~~~~G~~v--g----------~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++|.|+|++++++++.++|+++  .          .++..++||.|+.+.|.++.
T Consensus       103 iaf~V~D~~~~~~~l~~~G~~~~~~p~~~~~~~g~~~~~~~~~pgg~~~~lv~~~  157 (381)
T 1t47_A          103 LAIEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  157 (381)
T ss_dssp             EEEECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             EEEEECCHHHHHHHHHHcCCEEeeccccccCCCCeEEEEEEecCCCcEEEEEecC
Confidence            9999999999999999999987  1          14678999999999998863

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=98.74  E-value=9.7e-08  Score=71.30  Aligned_cols=94  Identities=15%  Similarity=0.196  Sum_probs=61.7

Q ss_pred             EEEecCC--CHHHHHHHHHhhhCeEEEE------cCe--------------EEEEecCCCC--Ccc-----ccCCCcc-e
Q 044588           16 QLLVEES--KATNVVQFYKTTSGAQLEI------AGS--------------TFLVSNFSND--SAA-----AKNMGIG-C   65 (117)
Q Consensus        16 ~L~v~~~--D~~~a~~FY~~~fG~~l~~------~~~--------------~l~~~~~~~~--g~~-----~~~~~~~-~   65 (117)
                      ++.+.++  |++++++||+++||.+...      ...              .|.+......  ..+     ....+.+ .
T Consensus       161 Hv~l~V~~~D~~~~~~FY~~vLGf~~~~~~~~~~~~~~~~~~~l~~~~g~~~l~l~~~~~~~~~~~~~~~~~~~~~~g~~  240 (357)
T 2r5v_A          161 HFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDHQGAGVQ  240 (357)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHCCEEEEEEEEEETTEEEEEEEEECTTSCCEEEEEEECTTSBCCHHHHHHHHHTSSEEE
T ss_pred             EEEEEEchhhHHHHHHHHHHhcCCcEEEEEeeccCCcceEEEEEECCCCCEEEEEeeecCCCCCchhHHHHHhcCCCCcc
Confidence            4555556  9999999999999954331      111              1111111000  000     0001234 4


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCee-----------ec---------------eEEEEECCCCCeEEEeccc
Q 044588           66 VLCLEIDDVEAALAKAMSGGVWA-----------TG---------------RVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        66 ~l~l~v~dvd~~~~~~~~~G~~v-----------g~---------------r~~~v~DP~G~~w~l~~~~  109 (117)
                      +|+|.|+|++++++++.++|.++           +.               +..+++||+|++|+|++..
T Consensus       241 Hiaf~v~Di~~~~~~L~~~Gv~~~~~p~~yy~~~~~r~~~~~~~~~~~~~~~~l~~~Dp~G~llqi~t~~  310 (357)
T 2r5v_A          241 HIAFNSNDAVRAVKALSERGVEFLKTPGAYYDLLGERITLQTHSLDDLRATNVLADEDHGGQLFQIFTAS  310 (357)
T ss_dssp             EEEEECSCHHHHHHHHHHTTCCBCCCCHHHHHTTTTTCCCSSSCHHHHHHHTCEEEEETTEEEEEEEBCC
T ss_pred             EEEEEcCCHHHHHHHHHHcCCCcCCCchhHHHHHHHhhccchhhHHHHHHcCeEEecCCCceEEEEEccC
Confidence            89999999999999999999986           11               2688999999999999853

>2r5v_A PCZA361.1; dioxygenase, non-heme iron, vancomycin, oxidoreductase; HET: HHH; 2.30A {Amycolatopsis orientalis}

Probab=98.57  E-value=8.8e-07  Score=66.08  Aligned_cols=93  Identities=13%  Similarity=0.066  Sum_probs=62.3

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEE--------------EcCeEEEEecC-CCCCcc----ccCCCcceEEEEEeCCHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLE--------------IAGSTFLVSNF-SNDSAA----AKNMGIGCVLCLEIDDVE   75 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~--------------~~~~~l~~~~~-~~~g~~----~~~~~~~~~l~l~v~dvd   75 (117)
                      ..+.|+  |++++.+||+++||.++.              .++..+.+... .+.+..    ...+..-..++|.|+|++
T Consensus         9 v~~~v~--D~~~a~~fy~~~LGf~~~~~~~~~~g~~~~~~~g~~~l~l~~~~~~~~~~~~~~~~~g~g~~~iaf~V~D~~   86 (357)
T 2r5v_A            9 VEMYVE--NLEVAAFSWVDKYAFAVAGTSRSADHRSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADIAMATSDVA   86 (357)
T ss_dssp             EEEECS--CHHHHHHHHHHHHCCEEEEEEEETTEEEEEEEETTEEEEEEEESSTTSHHHHHHHHHSSEEEEEEEEESCHH
T ss_pred             EEEEEC--CHHHHHHHHHHcCCCeEEEEEcCCCceEEEEEeCCEEEEEeCCCCCCCHHHHHHHhcCCeEEEEEEEECCHH
Confidence            345566  999999999999994432              12222333221 111100    001113358999999999


Q ss_pred             HHHHHHHhCCCee--e--------ceEEEEECCCCCeEEEeccc
Q 044588           76 AALAKAMSGGVWA--T--------GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        76 ~~~~~~~~~G~~v--g--------~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++++++.++|+++  .        .+...++||+|+.+.|.++.
T Consensus        87 ~~~~~l~~~G~~~~~~p~~~~~g~~~~~~~~~p~g~~~~lv~~~  130 (357)
T 2r5v_A           87 AAYEAAVRAGAEAVRAPGQHSEAAVTTATIGGFGDVVHTLIQRD  130 (357)
T ss_dssp             HHHHHHHHTTCCEEEEEECCC-CCCCEEEEECSTTCEEEEEECC
T ss_pred             HHHHHHHHcCCeEeECcEecCCCeEEEEEEeccCCeEEEEEecc
Confidence            9999999999987  1        14778999999999998764

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=98.53  E-value=7.6e-07  Score=68.63  Aligned_cols=101  Identities=16%  Similarity=0.114  Sum_probs=64.8

Q ss_pred             cCCCcce-eEEEEecCCCHHHHHHHHHhhhCeEEEE------------------cCeEEEEecCCCCCc-----------
Q 044588            7 LANFMGM-KPQLLVEESKATNVVQFYKTTSGAQLEI------------------AGSTFLVSNFSNDSA-----------   56 (117)
Q Consensus         7 ~~~~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l~~------------------~~~~l~~~~~~~~g~-----------   56 (117)
                      .|..+++ ...|.|+  |+++|++||+++||.++..                  ++..+.+......+.           
T Consensus        20 ~~~i~~i~HV~i~V~--Dle~a~~FY~~~LGf~~v~~~~~~~g~~~~~~~~l~~g~~~l~L~~~~~~~~~~~~~~~~~~~   97 (424)
T 1sqd_A           20 KFKVKRFHHIEFWCG--DATNVARRFSWGLGMRFSAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTA   97 (424)
T ss_dssp             SSCEEEEEEEEEECS--CHHHHHHHHHHHHTCEEEEEESGGGTCSSEEEEEEEETTEEEEEEEECCGGGTTTCCGGGCCC
T ss_pred             cccCCeEEEEEEEEC--CHHHHHHHHHHcCCCEEEEEEcCCCCceeEEEEEEcCCCEEEEEecCCCCccccccccccccc
Confidence            4444444 4566677  9999999999999954321                  122233322110000           


Q ss_pred             -------c------ccCCCcceEEEEEeCCHHHHHHHHHhCCCee-----e----ceEEEEECCCCCeEEEeccc
Q 044588           57 -------A------AKNMGIGCVLCLEIDDVEAALAKAMSGGVWA-----T----GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        57 -------~------~~~~~~~~~l~l~v~dvd~~~~~~~~~G~~v-----g----~r~~~v~DP~G~~w~l~~~~  109 (117)
                             .      ...++.-.+|+|.|+|++++++++.++|+++     .    .+...+++|.|+.+.|.++.
T Consensus        98 p~~~~~~~~~~~~~~~~g~gv~~iAf~VdDvdaa~~~l~a~Ga~~~~~P~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (424)
T 1sqd_A           98 SIPSFDHGSCRSFFSSHGLGVRAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYK  172 (424)
T ss_dssp             SSTTCCHHHHHHHHHHHCSEEEEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEEC
T ss_pred             ccccccchHHHHHHHhcCCeEEEEEEEeCCHHHHHHHHHHcCCEEeecCcCCCCceEEEEEEcCCCcEEEEEecC
Confidence                   0      0001133589999999999999999999987     1    15667788888888887654

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=98.40  E-value=3.3e-06  Score=64.63  Aligned_cols=100  Identities=16%  Similarity=0.168  Sum_probs=67.5

Q ss_pred             cCCCcce-eEEEEecCCCHHHHHHHHHhhhCeEEE------------------EcCeEEEEecCC-CCCccc----cCCC
Q 044588            7 LANFMGM-KPQLLVEESKATNVVQFYKTTSGAQLE------------------IAGSTFLVSNFS-NDSAAA----KNMG   62 (117)
Q Consensus         7 ~~~~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l~------------------~~~~~l~~~~~~-~~g~~~----~~~~   62 (117)
                      .+.++++ ...+.|.  |++++++||+++||.+..                  .++..+.+.... +.+.+.    ...+
T Consensus         6 ~~~i~~i~Hv~i~V~--d~~~a~~fY~~~LGf~~v~~~~~e~g~r~~~~~~l~~G~i~~~L~~p~~p~s~~~a~fl~~hG   83 (393)
T 3isq_A            6 RGRFLHFHSVTFWVG--NAKQAASFYCSKMGFEPLAYRGLETGSREVVSHVIKQGKIVFVLSSALNPWNKEMGDHLVKHG   83 (393)
T ss_dssp             SCEEEEEEEEEEECS--CHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHC
T ss_pred             CCCCceEeEEEEEEC--CHHHHHHHHHHhcCCEEEEEEcCCCCcEEEEEEEEecCCEEEEEecCCCCCchHHHHHHHhcC
Confidence            4445554 3455666  999999999999993222                  233344444321 111010    0112


Q ss_pred             cc-eEEEEEeCCHHHHHHHHHhCCCee-----------e-ceEEEEECCCCCeEEEecc
Q 044588           63 IG-CVLCLEIDDVEAALAKAMSGGVWA-----------T-GRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        63 ~~-~~l~l~v~dvd~~~~~~~~~G~~v-----------g-~r~~~v~DP~G~~w~l~~~  108 (117)
                      .+ .+++|.|+|+++++++|+++|+++           | .+++.+++|.|+...|.+.
T Consensus        84 ~Gv~~iAf~VdDvdaa~~ra~a~Ga~~v~eP~~~~~~~G~v~~a~I~~~Gd~~h~lVdr  142 (393)
T 3isq_A           84 DGVKDIAFEVEDCDYIVQKARERGAKIMREPWVEQDKFGKVKFAVLQTYGDTTHTLVEK  142 (393)
T ss_dssp             SEEEEEEEEEECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEE
T ss_pred             CcEEEEEEEeCCHHHHHHHHHHCCCeEecCccccccCCceeEEEEEEeCCCcEEEEecc
Confidence            44 479999999999999999999987           2 3678999999999988874

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=98.29  E-value=7.8e-06  Score=62.87  Aligned_cols=100  Identities=19%  Similarity=0.207  Sum_probs=63.5

Q ss_pred             CCCcce-eEEEEecCCCHHHHHHHHHhhhCeEEE------------------EcCeEEEEecCCCCCc------------
Q 044588            8 ANFMGM-KPQLLVEESKATNVVQFYKTTSGAQLE------------------IAGSTFLVSNFSNDSA------------   56 (117)
Q Consensus         8 ~~~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l~------------------~~~~~l~~~~~~~~g~------------   56 (117)
                      |..+++ ...|.|+  |+++|.+||+++||.++.                  .++..+.+......+.            
T Consensus        27 ~~i~~l~hV~i~V~--Dle~a~~fY~~~LGf~~~~~~~~~~G~~~~~~~~~~~G~~~l~L~~~~~~~~~~~~~p~~~~~~  104 (418)
T 1sp8_A           27 FHTLAFHHVELWCA--DAASAAGRFSFGLGAPLAARSDLSTGNSAHASLLLRSGSLSFLFTAPYAHGADAATAALPSFSA  104 (418)
T ss_dssp             SCEEEEEEEEEECS--CHHHHHHHHHHHHTCCEEEEESGGGTCCSEEEEEEEETTEEEEEEEECCSSCCGGGCSSTTCCH
T ss_pred             ccCceEEEEEEEeC--CHHHHHHHHHHhCCCEEEEEEcCCCCCcceEEEEEeeCCEEEEEecCCCCcccccccccccccc
Confidence            444443 3455666  999999999999994321                  1222333322110000            


Q ss_pred             cc-----cCCCcc-eEEEEEeCCHHHHHHHHHhCCCee-----e----ceEEEEECCCCCeEEEeccc
Q 044588           57 AA-----KNMGIG-CVLCLEIDDVEAALAKAMSGGVWA-----T----GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        57 ~~-----~~~~~~-~~l~l~v~dvd~~~~~~~~~G~~v-----g----~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +.     ...+.+ .+|.|.|+|++++++++.++|+++     +    .++..+++|.|+.+.|..+.
T Consensus       105 ~~~~~~~~~hg~gv~~iAf~V~Dv~~a~~~l~~~Ga~~~~~p~~~~~~~~~~~i~~~Gg~~~~lvd~~  172 (418)
T 1sp8_A          105 AAARRFAADHGLAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYP  172 (418)
T ss_dssp             HHHHHHHHHHSSEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECC
T ss_pred             hhHHHHHhhcCCeeEEEEEEeCCHHHHHHHHHHCCCEEEeccccccCceEEEEEecCCCEEEEEEccC
Confidence            00     001133 589999999999999999999987     1    23567788888888887765

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=98.29  E-value=3.1e-05  Score=55.71  Aligned_cols=100  Identities=14%  Similarity=0.081  Sum_probs=61.8

Q ss_pred             cCCCcceeEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEe----------cCCCCCccccCCC--cceEEEEEeCC
Q 044588            7 LANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVS----------NFSNDSAAAKNMG--IGCVLCLEIDD   73 (117)
Q Consensus         7 ~~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~----------~~~~~g~~~~~~~--~~~~l~l~v~d   73 (117)
                      +-....++|.|.|+  |.++.++||++++|..+... +....++          ...|........|  .--.+.|-+++
T Consensus         6 ~~~~~~~~p~LrV~--nr~~~~~FY~~vlG~kll~ee~~~a~lg~~~~~~~L~lEEsp~~~~~~~~Glkh~a~i~i~vp~   83 (244)
T 3e0r_A            6 VNQIVRIIPTLKAN--NRKLNETFYIETLGMKALLEESAFLSLGDQTGLEKLVLEEAPSMRTRKVEGRKKLARLIVKVEN   83 (244)
T ss_dssp             CCCEEEEEEEEEES--SHHHHHHHHTTTTCCEEEEECSSEEEEECTTCCEEEEEEECCTTTCBCCCSSCSEEEEEEEESS
T ss_pred             ccceEEEeeEEEEC--CHHHHHHHHHhccCcEEeeccCcEEEeecCCCcceEEEEeCCCcccccccccceeeeEEEEcCC
Confidence            34456789999999  99999999999999544322 2222222          2112000011111  11245688888


Q ss_pred             HHHHHHHHHhCCCee-----e--ceEEEEECCCCCeEEEeccc
Q 044588           74 VEAALAKAMSGGVWA-----T--GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        74 vd~~~~~~~~~G~~v-----g--~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .++.-. ++.+|..+     |  +.-.++.||+||.|.|....
T Consensus        84 ~~el~~-lL~~~~~~~~~~~gdhgyA~yl~dPEGn~ieiyae~  125 (244)
T 3e0r_A           84 PLEIEG-ILSKTDSIHRLYKGQNGYAFEIFSPEDDLILIHAED  125 (244)
T ss_dssp             HHHHHH-HHTTCSCCSEEEECSSSEEEEEECTTCCEEEEECCS
T ss_pred             HHHHHH-HHhcccccccccccCCcEEEEEECCCCCeEEEEEcC
Confidence            776644 55556655     2  23459999999999998744

>4ghg_A Homoprotocatechuate 2,3-dioxygenase; oxygen activation, Fe(II), 2-His-1-carboxylate triad, 4-nitrocatechol, OXY complex, oxidoreductase; HET: P6G PG4 DHY; 1.50A {Brevibacterium fuscum} PDB: 1q0o_A 1q0c_A 2iga_A* 2ig9_A 3ojj_A* 3bza_A* 3ojk_A* 3ojt_A* 3ojn_A* 4ghh_A* 4ghc_A 4ghd_A* 4ghe_A* 4ghf_A* 3eck_A* 3ecj_A*

Probab=98.08  E-value=0.00011  Score=55.41  Aligned_cols=92  Identities=11%  Similarity=0.054  Sum_probs=56.5

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE---Ec--CeEE-EE--ecCCCCCcc-ccCCCcc-eEEEEEeCCHHH---HHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE---IA--GSTF-LV--SNFSNDSAA-AKNMGIG-CVLCLEIDDVEA---ALAKAM   82 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~---~~--~~~l-~~--~~~~~~g~~-~~~~~~~-~~l~l~v~dvd~---~~~~~~   82 (117)
                      .|.+.  |++++.+||+. ||..+.   ..  +... .+  .+...+... ...++.+ -+++|.|+|+++   .++++.
T Consensus       157 ~L~v~--D~~~t~~Fy~~-LGf~~sd~~~~~~g~~~~~f~~~~~~hH~la~~~~~~~~lhHvaf~v~d~d~v~~~~d~l~  233 (365)
T 4ghg_A          157 NQVTP--DVPRGRKYLED-LGFRVTEDIQDDEGTTYAAWMHRKGTVHDTALTGGNGPRLHHVAFSTHEKHNIIQICDKMG  233 (365)
T ss_dssp             EEEES--CHHHHHHHHHH-TTCEEEEEEECTTSCEEEEEEESSSSSCSEEEEESSBSEEEEEEEECSSHHHHHHHHHHHH
T ss_pred             EEeec--CHHHHHHHHHh-cCCEEEEEEecCCCceeEEeeecCCcccceeeecCCCCceeEEEEecCCHHHHHHHHHHHH
Confidence            45566  99999999976 784332   11  1111 11  121111111 1112234 479999998765   577888


Q ss_pred             hCCCee----e--------ceEEEEECCCCCeEEEecccC
Q 044588           83 SGGVWA----T--------GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        83 ~~G~~v----g--------~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++|..+    |        ..+.|++||+|+.+++++...
T Consensus       234 ~~g~~~~i~~GpgRH~~~~~~f~Y~~dP~G~~iE~~t~g~  273 (365)
T 4ghg_A          234 ALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDY  273 (365)
T ss_dssp             HTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             hCCCCceeEeCCCccCCCCcEEEEEECCCCceEEEEcCCc
Confidence            888742    1        346799999999999987653

>1t47_A 4-hydroxyphenylpyruvate dioxygenase; triketone inhibitor, iron, oxidoreductase; HET: NTD; 2.50A {Streptomyces avermitilis} SCOP: d.32.1.3 d.32.1.3

Probab=98.06  E-value=3.1e-05  Score=58.49  Aligned_cols=94  Identities=17%  Similarity=0.184  Sum_probs=60.1

Q ss_pred             EEEecCC--CHHHHHHHHHhhhCeEEEEc----------------------C-eEEEEecCC---CCCcc----ccCCCc
Q 044588           16 QLLVEES--KATNVVQFYKTTSGAQLEIA----------------------G-STFLVSNFS---NDSAA----AKNMGI   63 (117)
Q Consensus        16 ~L~v~~~--D~~~a~~FY~~~fG~~l~~~----------------------~-~~l~~~~~~---~~g~~----~~~~~~   63 (117)
                      ++.+.++  |++++++||+++||.+....                      + ..|.+....   ..+..    ....+.
T Consensus       187 Hv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~i~~~~~~~~~~~l~~~~g~v~i~l~~~~~~~~~s~~~~~l~~~~g~  266 (381)
T 1t47_A          187 HCVGNVELGRMNEWVGFYNKVMGFTNMKEFVGDDIATEYSALMSKVVADGTLKVKFPINEPALAKKKSQIDEYLEFYGGA  266 (381)
T ss_dssp             EEEEECCTTCHHHHHHHHHHHHCCEECSCCBCHHHHTTTTSEEEEEEECTTSCSEEEEEEECCSSSCCHHHHHHHHHTSC
T ss_pred             EEEEeeccccHHHHHHHHHHhhCCEEeeecCcceeccCCccEEEEEEECCCCcEEEEEecCCcCCCccHHHHHHHHhCCC
Confidence            4444455  99999999999999544211                      0 112221111   00000    001234


Q ss_pred             c-eEEEEEeCCHHHHHHHHHhCCCee--e---------ce---------------EEEEECCCCCeEEEeccc
Q 044588           64 G-CVLCLEIDDVEAALAKAMSGGVWA--T---------GR---------------VGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        64 ~-~~l~l~v~dvd~~~~~~~~~G~~v--g---------~r---------------~~~v~DP~G~~w~l~~~~  109 (117)
                      | .+|+|.|+|++++++++.++|.++  .         .|               .-+-+||+|++++|+++.
T Consensus       267 Gv~HiAf~vdDi~~~~~~L~~~Gv~~~~~p~~Yy~~l~~R~~~~~~~~~~l~~~~il~d~d~~g~llqift~~  339 (381)
T 1t47_A          267 GVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTKP  339 (381)
T ss_dssp             EEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBCC
T ss_pred             CcceEEEecCCHHHHHHHHHHcCCccCCCCccHHHHHHHhccccchhHHHHHHhCeEEeeCCCCeEEEEeccC
Confidence            5 589999999999999999999987  1         01               234489999999999865

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=97.93  E-value=2.1e-05  Score=58.80  Aligned_cols=90  Identities=14%  Similarity=0.224  Sum_probs=59.2

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE------------cCeEEEEecCCCCCcc---ccCCCcc-eEEEEEeCCHHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI------------AGSTFLVSNFSNDSAA---AKNMGIG-CVLCLEIDDVEAALA   79 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~------------~~~~l~~~~~~~~g~~---~~~~~~~-~~l~l~v~dvd~~~~   79 (117)
                      .+.|+  |++++.+|| ++||.++..            ++..+.+.. .+.+..   ....+.+ ..+.|.|+|++++++
T Consensus        17 ~~~V~--D~~~~~~fy-~~LGf~~~~~~~~~~~~l~~~g~~~l~l~~-~~~~~~~~~~~~~g~gv~~iaf~V~D~~~~~~   92 (357)
T 1cjx_A           17 EFASP--TPGTLEPIF-EIMGFTKVATHRSKNVHLYRQGEINLILNN-EPNSIASYFAAEHGPSVCGMAFRVKDSQKAYN   92 (357)
T ss_dssp             EEECS--STTSSHHHH-HHTTCEEEEEESSSSEEEEEETTEEEEEEC-CSSSHHHHHHHHHSSEEEEEEEEESCHHHHHH
T ss_pred             EEEeC--CHHHHHHHH-HHCCCEEEEEeCCeeEEEEecCCEEEEEEC-CCCchhhhhhhhcCCeEEEEEEEeCCHHHHHH
Confidence            34555  999999999 799954421            122222222 111110   0011233 579999999999999


Q ss_pred             HHHhCCCee-------e-ceEEEEECCCCCeEEEeccc
Q 044588           80 KAMSGGVWA-------T-GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        80 ~~~~~G~~v-------g-~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++.++|+++       | .+...+++|.|..+.|..+.
T Consensus        93 ~l~~~G~~~~~~~~~~g~~~~~~~~~~gg~~~~~vd~~  130 (357)
T 1cjx_A           93 RALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRF  130 (357)
T ss_dssp             HHHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCC
T ss_pred             HHHHcCCEEeecCCCCCcEEEEeeeCCCCeEEEEECCC
Confidence            999999987       2 24678899999998888764

>1cjx_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase, iron; 2.40A {Pseudomonas fluorescens} SCOP: d.32.1.3 d.32.1.3

Probab=97.82  E-value=3.9e-05  Score=57.32  Aligned_cols=94  Identities=15%  Similarity=0.092  Sum_probs=58.8

Q ss_pred             EEEecCC--CHHHHHHHHHhhhCeEEE----EcC--e----EEEEecCC-----------C-CCcc----ccCCCcc-eE
Q 044588           16 QLLVEES--KATNVVQFYKTTSGAQLE----IAG--S----TFLVSNFS-----------N-DSAA----AKNMGIG-CV   66 (117)
Q Consensus        16 ~L~v~~~--D~~~a~~FY~~~fG~~l~----~~~--~----~l~~~~~~-----------~-~g~~----~~~~~~~-~~   66 (117)
                      ++.+.++  |++++++||+++||.+..    +.+  .    .++.....           . ....    ....+.+ .+
T Consensus       161 Hv~l~V~~~dl~~a~~FY~~vLGf~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~L~~~~~~~~~~~~~~~~~~~g~g~~H  240 (357)
T 1cjx_A          161 HLTHNVYRGRMVYWANFYEKLFNFREARYFDIKGEYTGLTSKAMSAPDGMIRIPLNEESSKGAGQIEEFLMQFNGEGIQH  240 (357)
T ss_dssp             EECEECCTTHHHHHHHHHHHHHCCEEEEEEEEECSSCEEEEEEEECTTSSCEEEEEEECTTCCSHHHHHHHHHTSSBCCE
T ss_pred             ceEEeechhhHHHHHHHHHHhhCCceeeEEEeccCCcceEEEEEECCCCCEEEEEeeecCCCCChHHHhHHhcCCCCeeE
Confidence            4445555  999999999999994432    111  1    11211110           0 0000    0012234 58


Q ss_pred             EEEEeCCHHHHHHHHHhCCCee-e-c----------e---------------EEEEEC----CCCCeEEEeccc
Q 044588           67 LCLEIDDVEAALAKAMSGGVWA-T-G----------R---------------VGKVKD----PCGFTWLIYSPV  109 (117)
Q Consensus        67 l~l~v~dvd~~~~~~~~~G~~v-g-~----------r---------------~~~v~D----P~G~~w~l~~~~  109 (117)
                      |+|.|+|++++++++.++|.++ . .          |               .-+-+|    |+|++++|++..
T Consensus       241 iAf~v~Di~~~~~~L~~~Gv~~~~~~p~~Yy~~l~~r~~~~~~~~~~l~~~~il~d~d~~~~~~g~llqift~~  314 (357)
T 1cjx_A          241 VAFLTDDLVKTWDALKKIGMRFMTAPPDTYYEMLEGRLPDHGEPVDQLQARGILLDGSSVEGDKRLLLQIFSET  314 (357)
T ss_dssp             EEEEESCHHHHHHHHHHTTCCBCCCCCHHHHHTHHHHSTTCCCCHHHHHHHTCEEEEEEETTEEEEEEEEEBCC
T ss_pred             EEEEcCCHHHHHHHHHHcCCcccCCCChHHHHHHHHHhccccccHHHHHHcCeEEecCCCCCCCCeEEEEeccC
Confidence            9999999999999999999976 1 1          0               234477    789999999864

>3isq_A 4-hydroxyphenylpyruvate dioxygenase; tyrosine metabolism, DIS mutation, iron, mental retardation, metal-binding, oxidored phenylalanine catabolism; 1.75A {Homo sapiens} PDB: 1sqi_A*

Probab=97.46  E-value=0.00019  Score=54.88  Aligned_cols=27  Identities=22%  Similarity=0.372  Sum_probs=24.1

Q ss_pred             Ccce-EEEEEeCCHHHHHHHHHhCCCee
Q 044588           62 GIGC-VLCLEIDDVEAALAKAMSGGVWA   88 (117)
Q Consensus        62 ~~~~-~l~l~v~dvd~~~~~~~~~G~~v   88 (117)
                      |.|+ +|+|.|+|++++++++.++|.++
T Consensus       254 G~Gi~HiA~~~dDi~~~~~~l~~~Gv~~  281 (393)
T 3isq_A          254 GAGVQHIALKTEDIITAIRHLRERGLEF  281 (393)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHHTTCCB
T ss_pred             CCCcceEEEEcCCHHHHHHHHHHcCCcc
Confidence            4554 89999999999999999999987

>1sp8_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 2.00A {Zea mays} SCOP: d.32.1.3 d.32.1.3

Probab=97.30  E-value=0.00084  Score=51.50  Aligned_cols=47  Identities=26%  Similarity=0.276  Sum_probs=35.9

Q ss_pred             cce-EEEEEeCCHHHHHHHHHh----CCCee--e----------ceE-----------------EEEECCCCCeEEEecc
Q 044588           63 IGC-VLCLEIDDVEAALAKAMS----GGVWA--T----------GRV-----------------GKVKDPCGFTWLIYSP  108 (117)
Q Consensus        63 ~~~-~l~l~v~dvd~~~~~~~~----~G~~v--g----------~r~-----------------~~v~DP~G~~w~l~~~  108 (117)
                      .|+ +|+|.|+|++++++++.+    +|.++  .          .|.                 -+=+|..|.+++|++.
T Consensus       280 ~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~Pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llqift~  359 (418)
T 1sp8_A          280 PGVQHMALASDDVLRTLREMQARSAMGGFEFMAPPTSDYYDGVRRRAGDVLTEAQIKECQELGVLVDRDDQGVLLQIFTK  359 (418)
T ss_dssp             SEEEEEEEEETTHHHHHHHHHTSGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEEEBC
T ss_pred             CCcCEEEEEeCCHHHHHHHHhhhhccCCeEEccCCCcchhHHHHHhhccccchhhHHHHHHhCcEEecCCCCeEEEEEec
Confidence            454 899999999999999999    79877  1          122                 1345778899999876


Q ss_pred             c
Q 044588          109 V  109 (117)
Q Consensus       109 ~  109 (117)
                      .
T Consensus       360 ~  360 (418)
T 1sp8_A          360 P  360 (418)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1sqd_A 4-hydroxyphenylpyruvate dioxygenase; oxidoreductase; 1.80A {Arabidopsis thaliana} SCOP: d.32.1.3 d.32.1.3 PDB: 1tfz_A* 1tg5_A* 1sp9_A

Probab=97.15  E-value=0.002  Score=49.52  Aligned_cols=47  Identities=26%  Similarity=0.230  Sum_probs=36.4

Q ss_pred             cc-eEEEEEeCCHHHHHHHHHh----CCCee------------eceE-----------------EEEECCCCCeEEEecc
Q 044588           63 IG-CVLCLEIDDVEAALAKAMS----GGVWA------------TGRV-----------------GKVKDPCGFTWLIYSP  108 (117)
Q Consensus        63 ~~-~~l~l~v~dvd~~~~~~~~----~G~~v------------g~r~-----------------~~v~DP~G~~w~l~~~  108 (117)
                      .| -+|+|.|+|++++++++.+    +|+++            ..|.                 -+=+|..|.+++|++.
T Consensus       283 ~G~~HIAf~vdDI~~a~~~L~~r~~~~Gv~~l~~pp~~YY~~l~~r~~~~~~~~~~~~l~~~~IL~D~d~~g~llqift~  362 (424)
T 1sqd_A          283 AGLQHLALMSEDIFRTLREMRKRSSIGGFDFMPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTK  362 (424)
T ss_dssp             CEEEEEEEEESCHHHHHHHHHHHGGGTSCCBCCCCCHHHHHHHHHHHTTTSCHHHHHHHHHHTCEEEECSSEEEEEEEBC
T ss_pred             CCcCEEEEEeCCHHHHHHHHHhhhccCCcEEecCCCcchhHHHHHhhccccchhhHHHHHHcCeEEecCCCCeEEEEEcc
Confidence            45 4899999999999999999    89887            1122                 2446778999999976


Q ss_pred             c
Q 044588          109 V  109 (117)
Q Consensus       109 ~  109 (117)
                      .
T Consensus       363 ~  363 (424)
T 1sqd_A          363 P  363 (424)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris}

Probab=95.64  E-value=0.039  Score=46.42  Aligned_cols=46  Identities=11%  Similarity=-0.023  Sum_probs=39.0

Q ss_pred             EEEEEeCCHHHHHHHHHhCCCee-------eceEEEEECCCCCeEEEecccCC
Q 044588           66 VLCLEIDDVEAALAKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        66 ~l~l~v~dvd~~~~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      ++.|.+.|++++.++|.+.+..+       +..-.++.||.||.+.|.+...+
T Consensus        97 ~l~f~~~dL~~~~~~L~~~~~~~Q~~ps~~~~~e~yt~DPlGNvIgfs~~~~~  149 (941)
T 3opy_B           97 NIAFKSSSLSKLVKLLKDGGHPVQQSPNEISPFEVYTVDPLGSLIGFSGFKNP  149 (941)
T ss_dssp             EEEEEESCHHHHHHHHHTTTCCCBCSSSSCSCEEECCSSCCEEEECC-CCSSS
T ss_pred             eEEEEeCCHHHHHHHHHhcCCccccCCCcCCCceEEeECCCCCEEEEeccCCc
Confidence            99999999999999999988755       55677999999999999886643

>3e0r_A C3-degrading proteinase (CPPA protein); MCSG, PSI, SAD, structural GE protein structure initiative; 2.30A {Streptococcus pneumoniae}

Probab=95.30  E-value=0.017  Score=41.43  Aligned_cols=90  Identities=14%  Similarity=0.117  Sum_probs=53.7

Q ss_pred             cCCCcceeEEEEecCCCHHHHHHHHHhhhCeEEEEcCeEEEEecCCCCCccccCC-Ccce-EEEEEeC--CHHHHHHHHH
Q 044588            7 LANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEIAGSTFLVSNFSNDSAAAKNM-GIGC-VLCLEID--DVEAALAKAM   82 (117)
Q Consensus         7 ~~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~~~~l~~~~~~~~g~~~~~~-~~~~-~l~l~v~--dvd~~~~~~~   82 (117)
                      |+.++- .-+|.|.  |.+++  ||++ +|.     +..+.+......+.+..+. .-+. .+.|.++  |+.+..+++.
T Consensus       148 Ls~fti-~I~LnV~--d~~~s--Fy~~-~~~-----~~~~~F~~a~G~dl~~~~~~t~gLe~l~~~v~~~dl~~l~~~L~  216 (244)
T 3e0r_A          148 LSKFEI-SMELHLP--TDIES--FLES-SEI-----GASLDFIPAQGQDLTVDNTVTWDLSMLKFLVNELDIASLRQKFE  216 (244)
T ss_dssp             CSSEEE-EEEEEEC--TTCCC--SCCH-HHH-----TTTEEEEECCCTTTTCCTTSBSSEEEEEEEESSCCHHHHHHHTT
T ss_pred             CCCcEE-EEEEEcC--chHHH--Hhhc-cCC-----cccEEEEcccCCCCCCCCCCccCceEEEEEeCHHHHHHHHHHHH
Confidence            444553 6677777  99888  9987 331     2223332221111111111 0122 3333444  7788999998


Q ss_pred             hCCCee--eceEEEEECCCCCeEEEec
Q 044588           83 SGGVWA--TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        83 ~~G~~v--g~r~~~v~DP~G~~w~l~~  107 (117)
                      +.|..+  ...+..+.||.|+.|.|..
T Consensus       217 ~~g~~idkk~~~l~~~DpsgIeiwF~~  243 (244)
T 3e0r_A          217 STEYFIPKSEKFFLGKDRNNVELWFEE  243 (244)
T ss_dssp             TSCEECCTTCCEEEEECTTSCEEEEEE
T ss_pred             hCCceEcccCCEEEEECCCCCEEEEEE
Confidence            888766  5678999999999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	117
d2i7ra1	115	d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Str	2e-05
d1u6la_	137	d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudom	2e-04
d1tsja_	129	d.32.1.7 (A:) Hypothetical protein MW1090 {Staphyl	3e-04
d1u7ia_	134	d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudom	4e-04
d1xy7a_	135	d.32.1.9 (A:) Hypothetical protein At5g48480 {Thal	6e-04

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]} Length = 115

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 38.6 bits (89), Expect = 2e-05
 Identities = 13/96 (13%), Positives = 27/96 (28%), Gaps = 17/96 (17%)

Query: 28  VQFYKTTSGAQLEIAGSTF--------LVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALA 79
               +     + + A   F         +    N     +N   G ++ +E++DV+    
Sbjct: 17  CADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHLVPLENFQSGIIIHIEVEDVDQNYK 76

Query: 80  KAMSGGVWAT---------GRVGKVKDPCGFTWLIY 106
           +    G+                 V+ P G     Y
Sbjct: 77  RLNELGIKVLHGPTVTDWGTESLLVQGPAGLVLDFY 112

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]} Length = 137

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.3 bits (83), Expect = 2e-04
 Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 11/79 (13%)

Query: 37  AQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGV---------- 86
           A+L +     + S+           G    L ++       L  A++ G           
Sbjct: 55  ARLVVGSFALMASDNHPAYPYEGIKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTF 114

Query: 87  WATGRVGKVKDPCGFTWLI 105
           WA    G   D  G  W++
Sbjct: 115 WA-ASFGMFTDRFGVAWMV 132

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]} Length = 129

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

 Score = 35.8 bits (82), Expect = 3e-04
 Identities = 10/83 (12%), Positives = 29/83 (34%), Gaps = 9/83 (10%)

Query: 33  TTSGAQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWAT--- 89
           T   +   + G  F+  + ++ +    ++ +     +E++ +   L     G +      
Sbjct: 48  TVQHSIFTLNGQVFMAIDANSGTELPISLFVTVKDTIEMERLFNGLK--DEGAILMPKTN 105

Query: 90  ----GRVGKVKDPCGFTWLIYSP 108
                    V+D  G ++ +  P
Sbjct: 106 MPPYREFAWVQDKFGVSFQLALP 128

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.4 bits (81), Expect = 4e-04
 Identities = 17/124 (13%), Positives = 34/124 (27%), Gaps = 34/124 (27%)

Query: 15  PQLLVEESKATNVVQFYKTTSG-----------------------AQLEIAGSTFLVSNF 51
           P L+ +  +A   + FY +                          A   +   +    + 
Sbjct: 8   PFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDS 67

Query: 52  SNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGV----------WATGRVGKVKDPCGF 101
               A          +  E +     LA+A+S G           ++  R   + D  G 
Sbjct: 68  HVRHAFDFTPAFSFFVDCESNAQIERLAEALSDGGKALMPLGDYGFS-QRFAWLADRFGV 126

Query: 102 TWLI 105
           +W +
Sbjct: 127 SWQL 130

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 135

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 34.9 bits (79), Expect = 6e-04
 Identities = 39/130 (30%), Positives = 51/130 (39%), Gaps = 34/130 (26%)

Query: 10  FMGMKPQLLVEESKATNVVQFYKTTSG-----------------------AQLEIAGSTF 46
           F   K  LLVE  K  + V FYK+  G                       ++L +AGS+F
Sbjct: 4   FTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSF 63

Query: 47  --LVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGGVWAT---------GRVGKV 95
                +     + AK+ G G    L   D EAA+AKA+  G             G  GKV
Sbjct: 64  VVCDVSSLPGFSTAKSEGSGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKV 123

Query: 96  KDPCGFTWLI 105
            DP G TW+ 
Sbjct: 124 TDPFGVTWIF 133

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	117
d1xy7a_	135	Hypothetical protein At5g48480 {Thale cress (Arabi	99.91
d1u6la_	137	Hypothetical protein PA1353 {Pseudomonas aeruginos	99.86
d1tsja_	129	Hypothetical protein MW1090 {Staphylococcus aureus	99.85
d1u7ia_	134	Hypothetical protein PA1358 {Pseudomonas aeruginos	99.84
d2i7ra1	115	Hypotheical protein SP0731 {Streptococcus pneumoni	99.79
d1u69a_	156	Hypothetical protein PA2721 {Pseudomonas aeruginos	99.74
d2pjsa1	111	Uncharacterized protein Atu1953 {Agrobacterium tum	99.72
d1ecsa_	120	Bleomycin resistance protein, BRP {Klebsiella pneu	99.7
d1jifa_	122	Bleomycin resistance protein, BRP {Streptomyces ve	99.7
d1klla_	128	Mitomycin resistance protein D, MRD {Streptomyces	99.63
d1xrka_	120	Bleomycin resistance protein, BRP {Streptoalloteic	99.62
d1r9ca_	130	Fosfomycin resistance protein FosX {Mesorhizobium	99.57
d1nkia_	134	Fosfomycin resistance protein A (FosA) {Pseudomona	99.54
d1npba_	140	Fosfomycin resistance protein A (FosA) {Serratia m	99.53
d1twua_	137	Hypothetical protein YycE {Bacillus subtilis [TaxI	99.53
d1f9za_	135	Glyoxalase I (lactoylglutathione lyase) {Escherich	99.48
d1xqaa_	113	Hypothetical protein BC3580 {Bacillus cereus [TaxI	99.48
d1ss4a_	149	Hypothetical protein BC1747 {Bacillus cereus (stra	99.48
d1f1ua1	146	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	99.42
d1qipa_	176	Glyoxalase I (lactoylglutathione lyase) {Human (Ho	99.4
d1lgta1	131	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.39
d2c21a1	139	Glyoxalase I (lactoylglutathione lyase) {Leishmani	99.34
d1zswa1	144	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.33
d1jc4a_	145	Methylmalonyl-CoA epimerase {Propionibacterium she	99.32
d1mpya2	162	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.31
d1kw3b1	132	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	99.31
d1mpya1	145	Catechol 2,3-dioxygenase (metapyrocatechase) {Pseu	99.27
d1zswa2	170	Hypothetical protein BC1024 {Bacillus cereus [TaxI	99.23
d1t47a1	163	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	99.18
d1sqia1	149	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	99.14
d1sqda1	167	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	99.0
d1sp8a1	172	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	98.98
d1kw3b2	156	2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzy	98.96
d1f1ua2	176	Homoprotocatechuate 2,3-dioxygenase {Arthrobacter	98.89
d1cjxa1	150	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	98.33
d1t47a2	199	4-hydroxyphenylpyruvate dioxygenase, HppD {Strepto	97.7
d1sqia2	210	4-hydroxyphenylpyruvate dioxygenase, HppD {Human (	97.63
d1cjxa2	203	4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudom	97.54
d1sp8a2	224	4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Z	97.49
d1sqda2	230	4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-e	96.49

>d1xy7a_ d.32.1.9 (A:) Hypothetical protein At5g48480 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein At5g48480
domain: Hypothetical protein At5g48480
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.91  E-value=1.1e-23  Score=137.20  Aligned_cols=100  Identities=42%  Similarity=0.652  Sum_probs=81.0

Q ss_pred             CCCcceeEEEEecCCCHHHHHHHHHhhhCe-----------------------EEEEcCeEEEEecCCC-CC-ccccCCC
Q 044588            8 ANFMGMKPQLLVEESKATNVVQFYKTTSGA-----------------------QLEIAGSTFLVSNFSN-DS-AAAKNMG   62 (117)
Q Consensus         8 ~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~-----------------------~l~~~~~~l~~~~~~~-~g-~~~~~~~   62 (117)
                      |.+++++|+|+|++.|+++|++||+++||+                       +|++++..+++.+..+ .+ .+....+
T Consensus         2 ~~~~~~~P~l~v~~~~~~eAi~FY~~~fG~~~~~~~~~~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (135)
T d1xy7a_           2 LVFTEFKQMLLVEAQKVGDAVTFYKSAFGAIESGHSLYPKRKLDQELPHVLSSELNLAGSSFVVCDVSSLPGFSTAKSEG   81 (135)
T ss_dssp             CCEEEEEEEEEECTTCHHHHHHHHHHHHCCEEC---------------CCCEEEEEETTEEEEEEEGGGSTTCCCCCTTS
T ss_pred             cceeeEccEEEEECCCHHHHHHHHHHHhCCEEEEEEecCCccccccCCcEEEEEEEECCeeeeccccccccccccCCCCC
Confidence            678899999999888999999999999993                       4556666666655432 11 1122234


Q ss_pred             cceEEEEEeCCHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEec
Q 044588           63 IGCVLCLEIDDVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        63 ~~~~l~l~v~dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~  107 (117)
                      .+++|++.++|+++++++++++|+++         |.|+++|+|||||.|+|.+
T Consensus        82 ~~~~l~~~v~d~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~v~Dp~G~~W~i~e  135 (135)
T d1xy7a_          82 SGVTFLLGTKDAEAAVAKAVDAGAVKVEVTEAEVELGFKGKVTDPFGVTWIFAE  135 (135)
T ss_dssp             CCCEEEEECSCHHHHHHHHHHTTCEECCCCHHHHHTTEEEEEECTTSCEEEEEC
T ss_pred             cceEEEEeecCcceeEEEeecccceEecCcccccccCEEEEEECCCCCEEEEeC
Confidence            67899999999999999999999988         7899999999999999975

>d1u6la_ d.32.1.7 (A:) Hypothetical protein PA1353 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1353
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.86  E-value=1.9e-21  Score=127.28  Aligned_cols=97  Identities=18%  Similarity=0.334  Sum_probs=72.7

Q ss_pred             CcceeEEEEecCCCHHHHHHHHHhhhCeE----------------------------EEEcCeEEEEecCCCCCccccCC
Q 044588           10 FMGMKPQLLVEESKATNVVQFYKTTSGAQ----------------------------LEIAGSTFLVSNFSNDSAAAKNM   61 (117)
Q Consensus        10 ~~~~~p~L~v~~~D~~~a~~FY~~~fG~~----------------------------l~~~~~~l~~~~~~~~g~~~~~~   61 (117)
                      .|+++|||.+++ |+++|++||+++||.+                            |.+++..++..+..+ ..+ ...
T Consensus         1 ~~~i~pyl~f~g-~a~eAl~FY~~~fG~e~~~~~~~~~~~~~~~~~~~~~~~i~ha~l~i~g~~~~~~d~~~-~~~-~~~   77 (137)
T d1u6la_           1 SLQIVPYLIFNG-NCREAFSCYHQHLGGTLEAMLPFGDSPECGDIPADWKDKIMHARLVVGSFALMASDNHP-AYP-YEG   77 (137)
T ss_dssp             CCEEEEEEEESS-CHHHHHHHHHHHHCSEEEEEEESTTTTC----CCSSCCCEEEEEEEETTEEEEEEECCT-TSC-CCC
T ss_pred             CceEEEEEEECC-CHHHHHHHHHHHCCCEEEEEEEcccCCccccCCCCCCCeEEEEEEEEcCeEEEecccCC-ccc-ccC
Confidence            389999999973 8999999999999933                            444444555544322 111 123


Q ss_pred             CcceEEEEEeCCHH--HHHHHHHhCCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           62 GIGCVLCLEIDDVE--AALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        62 ~~~~~l~l~v~dvd--~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +.+.+++|.+++.|  +.+.+++++|+++         |.|+++|+||+|+.|+|..+.
T Consensus        78 ~~~~~~~l~~~~~d~~~~~~~~l~~G~~v~~p~~~~~wG~~~g~v~Dp~G~~W~i~~~~  136 (137)
T d1u6la_          78 IKGCSISLNVDSKAEAERLFNALAEGGSVQMPLGPTFWAASFGMFTDRFGVAWMVNCEQ  136 (137)
T ss_dssp             CCSEEEEEECSSHHHHHHHHHHHHTTSEEEEEEEEETTEEEEEEEECTTSCEEEEEESC
T ss_pred             CCcEEEEEEcCCHHHHHHHHhhcccCceeecCccccCCCcEEEEEECCCCCEEEEEecC
Confidence            36788888877555  5588889999988         789999999999999998764

>d1tsja_ d.32.1.7 (A:) Hypothetical protein MW1090 {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein MW1090
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.85  E-value=8.4e-21  Score=123.91  Aligned_cols=93  Identities=13%  Similarity=0.242  Sum_probs=71.2

Q ss_pred             CCCcceeEEEEecCCCHHHHHHHHHhhhC-----------------------eEEEEcCeEEEEecCCCCCccccCCCcc
Q 044588            8 ANFMGMKPQLLVEESKATNVVQFYKTTSG-----------------------AQLEIAGSTFLVSNFSNDSAAAKNMGIG   64 (117)
Q Consensus         8 ~~~~~~~p~L~v~~~D~~~a~~FY~~~fG-----------------------~~l~~~~~~l~~~~~~~~g~~~~~~~~~   64 (117)
                      |.|.+++|||.+++ |+++|++||+++||                       ++|+++|..+++.+..+ +.     +.+
T Consensus         1 M~m~~i~Pyl~f~g-~a~eAi~FY~~vFg~~~v~~~~~~~~~~~~~~g~i~ha~l~i~g~~~~~~d~~~-~~-----~~~   73 (129)
T d1tsja_           1 MDIPKITTFLMFNN-QAEEAVKLYTSLFEDSEIITMAKYGENGPGDPGTVQHSIFTLNGQVFMAIDANS-GT-----ELP   73 (129)
T ss_dssp             CCCCSEEEEEECSS-CHHHHHHHHHHHSSSCEEEEEEECC-----CTTSEEEEEEEETTEEEEEEC-------------C
T ss_pred             CCCCcEEEEEEECC-CHHHHHHHHHHHcCCcEEEEEEecCCCCCCCCCcEEEEEEEECCEEEEeecCCC-CC-----CCC
Confidence            67889999999973 89999999999997                       46777888888877643 11     134


Q ss_pred             eEEEEEeCCHHH---HHHHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           65 CVLCLEIDDVEA---ALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        65 ~~l~l~v~dvd~---~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +++++.+++.|+   ++++ +++|+++         |.|+++|+||||+.|+|+.+
T Consensus        74 ~s~~v~~~~~~e~~~~~~~-L~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~p  128 (129)
T d1tsja_          74 ISLFVTVKDTIEMERLFNG-LKDEGAILMPKTNMPPYREFAWVQDKFGVSFQLALP  128 (129)
T ss_dssp             CCEEEECSSHHHHHHHHHH-HHTTCEEEEEEEEETTEEEEEEEECTTSCEEEEEEC
T ss_pred             EEEEeccCCHHHHHHHHHH-hccCCEEecccccccccceEEEEECCCCCEEEEeCC
Confidence            567788887664   4554 5677777         78999999999999999875

>d1u7ia_ d.32.1.7 (A:) Hypothetical protein PA1358 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA1358
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.84  E-value=4.1e-20  Score=121.13  Aligned_cols=96  Identities=18%  Similarity=0.274  Sum_probs=74.1

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhC-----------------------eEEEEcCeEEEEecCCCCCccccCCCcceEE
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSG-----------------------AQLEIAGSTFLVSNFSNDSAAAKNMGIGCVL   67 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG-----------------------~~l~~~~~~l~~~~~~~~g~~~~~~~~~~~l   67 (117)
                      .+++|||.++.+|+++|++||+++||                       ++|++++..+++.+..+ +.. ...+.++++
T Consensus         4 ~~l~PyL~f~g~~a~eAi~FY~~~Fg~~~v~~~~~~~~~~~~~~g~v~ha~l~i~~~~i~~~d~~~-~~~-~~~~~~~s~   81 (134)
T d1u7ia_           4 ARVRPFLMFQGVQAEAAMNFYLSLFDDAEILQIQRYGAEGPGPEGSVLKALFRLGDQSVHCIDSHV-RHA-FDFTPAFSF   81 (134)
T ss_dssp             CEEEEEEEEESSCHHHHHHHHHHHCSSEEEEEEEECCTTCSSCTTSEEEEEEEETTEEEEEEEESS-CCS-CCCCTTEEE
T ss_pred             CcEEEEEEECCcCHHHHHHHHHHhCCCeEEEEEEEcCCCCCCCCCCEEEEEEEECCEEEEEecCCC-CCC-CCCCCceEE
Confidence            35899999985579999999999998                       46677788888877643 111 123367888


Q ss_pred             EEEeCCHHH--HHHHHHhCCCee---------eceEEEEECCCCCeEEEecc
Q 044588           68 CLEIDDVEA--ALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        68 ~l~v~dvd~--~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      ++.+++.|+  .+.+++++|+++         |.|+++|+||||+.|+|.-+
T Consensus        82 ~l~~~~~d~~~~~~~~l~~gg~v~~p~~~~~~g~~~g~v~D~fGv~W~i~~~  133 (134)
T d1u7ia_          82 FVDCESNAQIERLAEALSDGGKALMPLGDYGFSQRFAWLADRFGVSWQLNLA  133 (134)
T ss_dssp             EEECCCHHHHHHHHHHHHTTSEEEEEEECCSSSSEEEEEECTTSCEEEEEEC
T ss_pred             EEEeccHHHHHHHHHHHhcCCEEecCcccccccceEEEEECCCCCEEEEEcC
Confidence            888776543  366677889988         78999999999999999753

>d2i7ra1 d.32.1.2 (A:1-115) Hypotheical protein SP0731 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypotheical protein SP0731
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.79  E-value=1e-18  Score=110.87  Aligned_cols=89  Identities=18%  Similarity=0.278  Sum_probs=72.9

Q ss_pred             EEEecCCCHHHHHHHHHhhhC----------eEEEEcCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHHHHHHhCC
Q 044588           16 QLLVEESKATNVVQFYKTTSG----------AQLEIAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGG   85 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG----------~~l~~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~~~~~~~G   85 (117)
                      .|.|+  |+++|++||+++||          +.+..++..+++.....  .+....+.++.++|.|+|+++++++++++|
T Consensus         7 ~i~V~--di~~a~~FYe~~lg~~~~~~~~~~~~~~~g~~~l~l~~~~~--~~~~~~~~~~~~~f~v~D~d~~~~~l~~~G   82 (115)
T d2i7ra1           7 DIIVS--NVPQVCADLEHILDKKADYANDGFAQFTIGSHCLMLSQNHL--VPLENFQSGIIIHIEVEDVDQNYKRLNELG   82 (115)
T ss_dssp             EEECS--CHHHHHHHHHHHHTSCCSEEETTEEEEEETTEEEEEESSCS--SSCCCCCSCEEEEEECSCHHHHHHHHHHHT
T ss_pred             EEEEC--CHHHHHHHHHHhhCCceeeecCCeEEEEEcCceeeeeeccc--CCCCCCCcceEEEEEECCHHHHHHHHHhhc
Confidence            56777  99999999999999          55677777777765432  122223477899999999999999999999


Q ss_pred             Cee---------eceEEEEECCCCCeEEEecc
Q 044588           86 VWA---------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        86 ~~v---------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +++         |.|.++++||+||.|+|.+.
T Consensus        83 ~~i~~~~~~~~~g~~~~~~~DPdGn~ie~~~~  114 (115)
T d2i7ra1          83 IKVLHGPTVTDWGTESLLVQGPAGLVLDFYRM  114 (115)
T ss_dssp             CCEEEEEEECTTSCEEEEEECGGGCEEEEEEC
T ss_pred             cccccceEEeeCCeEEEEEECCCCCEEEEEEe
Confidence            987         67899999999999999874

>d1u69a_ d.32.1.7 (A:) Hypothetical protein PA2721 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: 3-demethylubiquinone-9 3-methyltransferase
domain: Hypothetical protein PA2721
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=1.8e-17  Score=111.21  Aligned_cols=93  Identities=19%  Similarity=0.223  Sum_probs=74.1

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhC------------------------eEEEEcCeEEEEecCCCCCccccCCCcceE
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSG------------------------AQLEIAGSTFLVSNFSNDSAAAKNMGIGCV   66 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG------------------------~~l~~~~~~l~~~~~~~~g~~~~~~~~~~~   66 (117)
                      .+++|+|.++ +++++|++||+++||                        ++|.++|..+|.+|..+ +   .+.+++++
T Consensus         1 ~~~t~~L~F~-Gna~EAl~FY~~vFg~~~i~~~~~~~~~~p~~~~~~Vmha~l~i~g~~lm~sD~~~-~---~~~~~~~s   75 (156)
T d1u69a_           1 SKNTICLWYD-SAALEAATFYAETFPDSAVLAVHRAPGDYPSGKEGDVLTVEFRVMGIPCLGLNGGP-A---FRHSEAFS   75 (156)
T ss_dssp             CCEEEEEEES-SCHHHHHHHHHHHSTTEEEEEEEECSSCBTTBCTTSEEEEEEEETTEEEEEEECCT-T---CCCCTTEE
T ss_pred             CCCcEeeeEC-CcHHHHHHHHHHHcCCCEEeEEEecCCCCCCCCCCcEEEEEEEECCeEEEeecCCC-C---CCCCCCeE
Confidence            3789999999 489999999999996                        56777888888877532 1   12347899


Q ss_pred             EEEEeCC---HHHHHHHHHhCCCeeeceEEEEECCCCCeEEEeccc
Q 044588           67 LCLEIDD---VEAALAKAMSGGVWATGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        67 l~l~v~d---vd~~~~~~~~~G~~vg~r~~~v~DP~G~~w~l~~~~  109 (117)
                      |+|.++|   ++++|++|.+.| .+..+||+|+|+||+.|+|..+.
T Consensus        76 l~l~~d~~eE~d~~f~~LsegG-~~~~~~G~v~DkFGV~Wqi~~~~  120 (156)
T d1u69a_          76 FQVATDDQAETDRLWNAIVDNG-GEESACGWCRDKWGISWQITPRV  120 (156)
T ss_dssp             EEEEESSHHHHHHHHHHHHHTT-CEECSTTEEECTTSCEEEEEEHH
T ss_pred             EEEecCCHHHHHHHHHHHhccC-CCCCCCeEEECCCCCEEEeChHH
Confidence            9999985   457799987755 44567899999999999999764

>d2pjsa1 d.32.1.2 (A:3-113) Uncharacterized protein Atu1953 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Uncharacterized protein Atu1953
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.72  E-value=1.1e-17  Score=104.03  Aligned_cols=94  Identities=14%  Similarity=0.134  Sum_probs=68.1

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCCC-----C-CccccCCCcceEEEEEeCCHHHHHHHHHh
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFSN-----D-SAAAKNMGIGCVLCLEIDDVEAALAKAMS   83 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~~-----~-g~~~~~~~~~~~l~l~v~dvd~~~~~~~~   83 (117)
                      +++.|+|.++  |+++|++||+++||.+.... +....+.....     . .........+.+++|.++|+|+.++++.+
T Consensus         2 ~ri~~~l~v~--d~~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvd~~~~~l~~   79 (111)
T d2pjsa1           2 RRVVANIATP--EPARAQAFYGDILGMPVAMDHGWIVTHASPLEAHAQVSFAREGGSGTDVPDLSIEVDNFDEVHARILK   79 (111)
T ss_dssp             EEEEEEEECS--CGGGGHHHHTTTTCCCEEEECSSEEEEEEEEEEEEEEEEESSSBTTBCCCSEEEEESCHHHHHHHHHH
T ss_pred             eEEEEEEEeC--CHHHHHHHHHHhhCCceeecccceeEeccccccceeeecccccCCCCceeEEEEEecCHHHHHHHHHh
Confidence            4688999999  99999999999999655432 22221111000     0 00011122556889999999999999999


Q ss_pred             CCCee---------eceEEEEECCCCCeEEEe
Q 044588           84 GGVWA---------TGRVGKVKDPCGFTWLIY  106 (117)
Q Consensus        84 ~G~~v---------g~r~~~v~DP~G~~w~l~  106 (117)
                      +|+++         |.|.++++||+||.|+|.
T Consensus        80 ~g~~~~~~p~~~~~g~~~~~~~DP~Gn~iei~  111 (111)
T d2pjsa1          80 AGLPIEYGPVTEAWGVQRLFLRDPFGKLINIL  111 (111)
T ss_dssp             TTCCCSEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred             hccccccCCeEcCCCcEEEEEECCCCCEEEeC
Confidence            99987         678999999999999984

>d1ecsa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Klebsiella pneumoniae [TaxId: 573]

Probab=99.70  E-value=2.5e-16  Score=99.66  Aligned_cols=91  Identities=16%  Similarity=0.220  Sum_probs=68.2

Q ss_pred             cceeEEEEecCCCHHHHHHHHHhhhCeEEEE----------cCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHHHH
Q 044588           11 MGMKPQLLVEESKATNVVQFYKTTSGAQLEI----------AGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAK   80 (117)
Q Consensus        11 ~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~----------~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~~~   80 (117)
                      .+++|.|.+.  |+++|++||++ ||.++..          ++..+.+..... ..   +...+..+++.++|+++.+++
T Consensus         2 ~~~~p~l~v~--Dl~~s~~FY~~-LGf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~d~~~~~~~   74 (120)
T d1ecsa_           2 DQATPNLPSR--DFDSTAAFYER-LGFGIVFRDAGWMILQRGDLMLEFFAHPG-LD---PLASWFSCCLRLDDLAEFYRQ   74 (120)
T ss_dssp             CEEEEEEEES--CHHHHHHHHHT-TTCEEEEECSSEEEEEETTEEEEEEECTT-CC---GGGCCCEEEEEESCHHHHHHH
T ss_pred             CeEEEEEEeC--CHHHHHHHHHH-cCCeeEEecCceeeeecceeccccccccc-cc---cCCCCcEEEEEECCHHHHHHH
Confidence            4689999999  99999999998 9955433          232333322211 11   112566889999999999999


Q ss_pred             HHhCCCee----------------eceEEEEECCCCCeEEEecc
Q 044588           81 AMSGGVWA----------------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        81 ~~~~G~~v----------------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +.++|..+                |.|.++|+||+||+|+|.+.
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~G~r~~~~~DPDGn~iei~q~  118 (120)
T d1ecsa_          75 CKSVGIQETSSGYPRIHAPELQGWGGTMAALVDPDGTLLRLIQN  118 (120)
T ss_dssp             HHHTTCCBCSSSSSEEEEEEECTTSSEEEEEECTTSCEEEEEEC
T ss_pred             HhhhhhhhccccccccccceecCCCcEEEEEECCCCCEEEEEEc
Confidence            99988765                56889999999999999874

>d1jifa_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptomyces verticillus [TaxId: 29309]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptomyces verticillus [TaxId: 29309]

Probab=99.70  E-value=1.2e-16  Score=100.95  Aligned_cols=93  Identities=19%  Similarity=0.233  Sum_probs=70.8

Q ss_pred             CCCcceeEEEEecCCCHHHHHHHHHhhhCeEEEE----------cCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHH
Q 044588            8 ANFMGMKPQLLVEESKATNVVQFYKTTSGAQLEI----------AGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAA   77 (117)
Q Consensus         8 ~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~~----------~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~   77 (117)
                      |+++..+|.|.++  |++++++||+++||.++..          ++..+.+..... ..    .....++.+.++|++++
T Consensus         2 ~~~~~~~pvL~v~--Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~l~l~~~~~-~~----~~~~~~~~~~~~~i~~~   74 (122)
T d1jifa_           2 VKFLGAVPVLTAV--DVPANVSFWVDTLGFEKDFGDRDFAGVRRGDIRLHISRTEH-QI----VADNTSAWIEVTDPDAL   74 (122)
T ss_dssp             CCEEEEEEEEEES--SHHHHHHHHHHTTCCEEEEECSSEEEEEETTEEEEEEECSC-HH----HHTTCEEEEEESCHHHH
T ss_pred             ccceeeEEEEEcC--CHHHHHHHHHhhhCCceEecCCceeEeeeeeeeeeeecccc-cc----ccceeEEEEeechhHHH
Confidence            6778889999999  9999999999999955433          333344333211 01    11456788999999999


Q ss_pred             HHHHHhCCCee----------------eceEEEEECCCCCeEEEec
Q 044588           78 LAKAMSGGVWA----------------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        78 ~~~~~~~G~~v----------------g~r~~~v~DP~G~~w~l~~  107 (117)
                      ++++.+++.+.                |+|.++++||+||+|+|.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~ief~~  120 (122)
T d1jifa_          75 HEEWARAVSTDYADTSGPAMTPVGESPAGREFAVRDPAGNCVHFTA  120 (122)
T ss_dssp             HHHHHTTSCSCTTCTTSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHhhcceEEeeccccccCccccCCCeEEEEEECCCCCEEEEEe
Confidence            99999998654                4678999999999999985

>d1klla_ d.32.1.2 (A:) Mitomycin resistance protein D, MRD {Streptomyces lavendulae [TaxId: 1914]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Mitomycin resistance protein D, MRD
species: Streptomyces lavendulae [TaxId: 1914]

Probab=99.63  E-value=1.4e-15  Score=97.03  Aligned_cols=92  Identities=22%  Similarity=0.339  Sum_probs=64.4

Q ss_pred             EEEEecCCCHHHHHHHHHhhhC------------eEEEEcC-eEEEEecCCC-----CCccccCCCcceEEEEEeCC---
Q 044588           15 PQLLVEESKATNVVQFYKTTSG------------AQLEIAG-STFLVSNFSN-----DSAAAKNMGIGCVLCLEIDD---   73 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG------------~~l~~~~-~~l~~~~~~~-----~g~~~~~~~~~~~l~l~v~d---   73 (117)
                      -.|.|.  |++++++||++ ||            +.+..++ ..+++.....     ........+++.++++.|++   
T Consensus         6 v~l~V~--D~~~s~~FY~~-Lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~   82 (128)
T d1klla_           6 FAVVVE--DMAKSMEFYRK-MGVEIPAEADSAPHTEAVLDGGIRLAWDTVETVRSYDPEWQAPTGGHRFAIAFEFPDTAS   82 (128)
T ss_dssp             EEEEES--CHHHHHHHHHH-TTCCCCTTGGGCSEEEEECGGGCEEEEEEHHHHHHHCTTCCCCCSSCSCEEEEECSSHHH
T ss_pred             EEEEcC--CHHHHHHHHHH-hCCccccccccccceeeeccceeeeeecccccccccCCCCCCCccccceeEeeeeccchh
Confidence            357788  99999999987 55            3333332 2333322100     11111223356789999886   


Q ss_pred             HHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           74 VEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        74 vd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++++++++.++|+++         |.|.++++||+||.|+|+++.
T Consensus        83 l~~~~~~l~~~G~~~~~~p~~~~~G~~~~~~~DPdG~~iel~~p~  127 (128)
T d1klla_          83 VDKKYAELVDAGYEGHLKPWNAVWGQRYAIVKDPDGNVVDLFAPL  127 (128)
T ss_dssp             HHHHHHHHHHTTCEEEEEEEECTTSEEEEEEECTTSCEEEEEEEC
T ss_pred             hHHHHHHHHhccCccccCCeEcCCCcEEEEEECCCCCEEEEEecC
Confidence            677899999999987         679999999999999999875

>d1xrka_ d.32.1.2 (A:) Bleomycin resistance protein, BRP {Streptoalloteichus hindustanus [TaxId: 2017]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Bleomycin resistance protein, BRP
species: Streptoalloteichus hindustanus [TaxId: 2017]

Probab=99.62  E-value=4.7e-15  Score=92.77  Aligned_cols=93  Identities=15%  Similarity=0.141  Sum_probs=68.1

Q ss_pred             CCCcceeEEEEecCCCHHHHHHHHHhhhCeEEE----------EcCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHH
Q 044588            8 ANFMGMKPQLLVEESKATNVVQFYKTTSGAQLE----------IAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAA   77 (117)
Q Consensus         8 ~~~~~~~p~L~v~~~D~~~a~~FY~~~fG~~l~----------~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~   77 (117)
                      +++++++|.|.|+  |+++|++||+++||.++.          .++..+.+.....     ....+...+.+.+++++..
T Consensus         1 ~~~t~~~pvL~v~--D~~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~   73 (120)
T d1xrka_           1 AKLTSAVPVLTAR--DVAEAVEFWTDRLGFSRVFVEDDFAGVVRDDVTLFISAVQD-----QVVPDNTQAWVWVRGLDEL   73 (120)
T ss_dssp             CEEEEEEEEEEES--CHHHHHHHHHHTTCCEEEEECSSEEEEEETTEEEEEEECSC-----TTTGGGCEEEEEEECHHHH
T ss_pred             CcceeEEEEEEEC--CHHHHHHHHHHhhCCeEEEECCCeeEEecccceeecccccc-----ccCCCCceEEEeeccHHHH
Confidence            3578899999999  999999999999995543          3333444433211     1122456778889999999


Q ss_pred             HHHHHhCCCee----------------eceEEEEECCCCCeEEEec
Q 044588           78 LAKAMSGGVWA----------------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        78 ~~~~~~~G~~v----------------g~r~~~v~DP~G~~w~l~~  107 (117)
                      ++++.+++...                +++.++|+||+||.|+|.+
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DPdGn~ief~~  119 (120)
T d1xrka_          74 YAEWSEVVSTNFRDASGPAMTEIVEQPWGREFALRDPAGNCVHFVA  119 (120)
T ss_dssp             HHHHTTTSBSCTTTCSSCEECCCEEETTEEEEEEECTTCCEEEEEE
T ss_pred             HHHHHHhhhHHhhhcccccccCceecCCEEEEEEECCCCCEEEEEE
Confidence            88887665433                3468899999999999975

>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein FosX
species: Mesorhizobium loti [TaxId: 381]

Probab=99.57  E-value=1.3e-14  Score=92.50  Aligned_cols=89  Identities=9%  Similarity=-0.006  Sum_probs=60.4

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE-----------------cCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI-----------------AGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAAL   78 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~-----------------~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~   78 (117)
                      .|.|+  |.+++++||+++||.++..                 ++..+.+....+   +.......+.+.+.++|+++++
T Consensus         9 ~l~v~--d~~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~f~v~~~dv~~~~   83 (130)
T d1r9ca_           9 TFIVR--DLERMTRILEGVFDAREVYASDTEQFSLSREKFFLIGDIWVAIMQGEK---LAERSYNHIAFKIDDADFDRYA   83 (130)
T ss_dssp             EEEES--CHHHHHHHHHHHHCCEEEEEGGGSTTCCSCEEEEEETTEEEEEEECCC---CSSCCSCEEEEECCGGGHHHHH
T ss_pred             EEEeC--CHHHHHHHHHHhcCCEEEEEcCCccccceeEEEEecCCEEEeeccccc---ccccceeeeeecccHHHHHHHH
Confidence            45666  9999999999999954432                 222222222111   1111123444445556999999


Q ss_pred             HHHHhCCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           79 AKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        79 ~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      +++.++|+++         +.+.++++||+||.|+|.+..
T Consensus        84 ~~l~~~gv~i~~~~~~~~~~~~~~~~~DPdGn~iEl~~~~  123 (130)
T d1r9ca_          84 ERVGKLGLDMRPPRPRVEGEGRSIYFYDDDNHMFELHTGT  123 (130)
T ss_dssp             HHHHHHTCCBCCCCC-----CCEEEEECTTSCEEEEECCC
T ss_pred             HHHHHCCCeEecCCcccCCCEEEEEEECCCCCEEEEEECC
Confidence            9999999987         467889999999999998753

>d1nkia_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.54  E-value=6e-14  Score=89.97  Aligned_cols=90  Identities=18%  Similarity=0.138  Sum_probs=62.7

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE----------EcCeEEEEecCCCCCccccCCCcceEEEEEeCCHHHHHHHHHhCC
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE----------IAGSTFLVSNFSNDSAAAKNMGIGCVLCLEIDDVEAALAKAMSGG   85 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~----------~~~~~l~~~~~~~~g~~~~~~~~~~~l~l~v~dvd~~~~~~~~~G   85 (117)
                      .|.++  |++++.+||+++||.++.          .++..+.......... .......+.+.+.++|++++++++.++|
T Consensus         9 ~l~v~--d~~~~~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~~~~~~dl~~~~~~l~~~G   85 (134)
T d1nkia_           9 TLAVA--DLPASIAFYRDLLGFRLEARWDQGAYLELGSLWLCLSREPQYGG-PAADYTHYAFGIAAADFARFAAQLRAHG   85 (134)
T ss_dssp             EEEES--CHHHHHHHHHHTTCCEEEEEETTEEEEEETTEEEEEEECTTCCC-CCSSSCEEEEEECHHHHHHHHHHHHHTT
T ss_pred             EEEeC--CHHHHHHHHHHhhCCeEEEeccceeeeecCCeEEEEeeeccccc-cccccccchhccccchHHHHHHHHHHCC
Confidence            35566  999999999999995443          2333332222111111 1111255677777789999999999999


Q ss_pred             Cee------eceEEEEECCCCCeEEEecc
Q 044588           86 VWA------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        86 ~~v------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +++      +.+..+++||+||.|+|.+.
T Consensus        86 ~~~~~~~~~~~~~~~f~DPdGn~iEl~~~  114 (134)
T d1nkia_          86 VREWKQNRSEGDSFYFLDPDGHRLEAHVG  114 (134)
T ss_dssp             CCEEECCCSSSCEEEEECTTCCEEEEESC
T ss_pred             CcCccCCCcceeEEEEECCCCCEEEEEEC
Confidence            988      45778999999999999764

>d1npba_ d.32.1.2 (A:) Fosfomycin resistance protein A (FosA) {Serratia marcescens [TaxId: 615]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Fosfomycin resistance protein A (FosA)
species: Serratia marcescens [TaxId: 615]

Probab=99.53  E-value=7.9e-14  Score=89.99  Aligned_cols=91  Identities=16%  Similarity=0.106  Sum_probs=62.1

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE----------EcCeEEEEecCCCCCccc--cCCCcceEEEEEeCCHHHHHHHHHh
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE----------IAGSTFLVSNFSNDSAAA--KNMGIGCVLCLEIDDVEAALAKAMS   83 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~----------~~~~~l~~~~~~~~g~~~--~~~~~~~~l~l~v~dvd~~~~~~~~   83 (117)
                      .|.|+  |++++.+||+++||.++.          .++..+.+..........  .....++.+.+.++|++++++++.+
T Consensus         9 ~l~v~--d~~~~~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~h~~~~~~~~d~~~~~~~l~~   86 (140)
T d1npba_           9 TLAVS--DLQKSVTFWHELLGLTLHARWNTGAYLTCGDLWVCLSYDEARQYVPPQESDYTHYAFTVAEEDFEPLSQRLEQ   86 (140)
T ss_dssp             EEEES--CHHHHHHHHHTTSCCEEEEEETTEEEEEETTEEEEEEECTTCCCCCGGGSCSCEEEEECCHHHHHHHHHHHHH
T ss_pred             EEEeC--CHHHHHHHHHHHhCCEEEEEeccccccccccccceeecccccccCCCcCCccceeeeechHHHHHHHHHHHHH
Confidence            45555  999999999999995543          233333332221111111  1111345555556799999999999


Q ss_pred             CCCee------eceEEEEECCCCCeEEEecc
Q 044588           84 GGVWA------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        84 ~G~~v------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +|+++      +++..+++||+||.|+|.+.
T Consensus        87 ~Gv~~~~~~~~~~~~~~~~DPdGn~iEi~~~  117 (140)
T d1npba_          87 AGVTIWKQNKSEGASFYFLDPDGHKLELHVG  117 (140)
T ss_dssp             TTCCEEECCCSSSEEEEEECTTCCEEEEEEC
T ss_pred             CCCeEeecCCCCceEEEEECCCCCEEEEEEC
Confidence            99987      56788999999999999764

>d1twua_ d.32.1.8 (A:) Hypothetical protein YycE {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein YycE
domain: Hypothetical protein YycE
species: Bacillus subtilis [TaxId: 1423]

Probab=99.53  E-value=7.4e-14  Score=90.12  Aligned_cols=96  Identities=11%  Similarity=0.127  Sum_probs=62.7

Q ss_pred             eeEEEEecCCCHHHHHHHHHhhhCeEEE-----EcCeEEEE-ecCC-C--------CCcc-ccCCCcceEEEEEeCC---
Q 044588           13 MKPQLLVEESKATNVVQFYKTTSGAQLE-----IAGSTFLV-SNFS-N--------DSAA-AKNMGIGCVLCLEIDD---   73 (117)
Q Consensus        13 ~~p~L~v~~~D~~~a~~FY~~~fG~~l~-----~~~~~l~~-~~~~-~--------~g~~-~~~~~~~~~l~l~v~d---   73 (117)
                      +..-|.|+  |++++++||+++||..+.     ..+..+.+ .... .        .+.. ...++...++.|.|+|   
T Consensus        11 ~RVa~pv~--Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~hlaf~v~~~~d   88 (137)
T d1twua_          11 IRIARPTG--QLDEIIRFYEEGLCLKRIGEFSQHNGYDGVMFGLPHADYHLEFTQYEGGSTAPVPHPDSLLVFYVPNAVE   88 (137)
T ss_dssp             EEEEEECS--CHHHHHHHHTTTSCCCEEEEEEEETTEEEEEEESSSSSEEEEEEEETTCCCCCCCCTTCEEEEECCCHHH
T ss_pred             EEEecccC--CHHHHHHHHHhccCCceeeeeccccceeEEEecCCCCceeeecccccccccccccccCceEEEEeCCHHH
Confidence            44455566  999999999999994431     11222211 1110 0        0111 1112233578887765   


Q ss_pred             HHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEecccC
Q 044588           74 VEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        74 vd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++++++++.++|+++        +.+.++|+||||+.++|..+..
T Consensus        89 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~f~DPDG~~Iel~~~~~  133 (137)
T d1twua_          89 LAAITSKLKHMGYQEVESENPYWSNGGVTIEDPDGWRIVFMNSKG  133 (137)
T ss_dssp             HHHHHHHHHHTTCCEECCSSHHHHSSEEEEECTTCCEEEEESSCC
T ss_pred             HHHHHHHHHHCCCeEeCCCCCCCCceEEEEECCCCCEEEEEcCCC
Confidence            788999999999987        5678899999999999996643

>d1f9za_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Escherichia coli [TaxId: 562]

Probab=99.48  E-value=1.1e-13  Score=87.39  Aligned_cols=98  Identities=17%  Similarity=0.130  Sum_probs=63.6

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE----c-Ce--EEEEecCC-C--C--------Ccccc-CCCcceEEEEEeCCH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI----A-GS--TFLVSNFS-N--D--------SAAAK-NMGIGCVLCLEIDDV   74 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~----~-~~--~l~~~~~~-~--~--------g~~~~-~~~~~~~l~l~v~dv   74 (117)
                      ...|.|+  |+++|++||+++||.++..    . +.  ...+.... .  .        ..... ......++++.++++
T Consensus         5 Hv~i~V~--Dl~~s~~FY~~iLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (135)
T d1f9za_           5 HTMLRVG--DLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFVGYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNA   82 (135)
T ss_dssp             EEEEECS--CHHHHHHHHHHTTCCEEEEEEEETTTTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEECSCH
T ss_pred             EEEEEcC--CHHHHHHHHHHHhCCEEEeeccccccceeeeeeccceeeeccccccccccccccccccccceeeccchHHH
Confidence            3456666  9999999999999955431    1 11  11111110 0  0        00011 111345788999999


Q ss_pred             HHHHHHHHhCCCee----------eceEEEEECCCCCeEEEecccCCCC
Q 044588           75 EAALAKAMSGGVWA----------TGRVGKVKDPCGFTWLIYSPVKKCA  113 (117)
Q Consensus        75 d~~~~~~~~~G~~v----------g~r~~~v~DP~G~~w~l~~~~~~~~  113 (117)
                      ++.++++.++|..+          +.++.+|+||+||.|+|.++.+..+
T Consensus        83 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~q~~~~~~  131 (135)
T d1f9za_          83 AEACEKIRQNGGNVTREAGPVKGGTTVIAFVEDPDGYKIELIEEKDAGR  131 (135)
T ss_dssp             HHHHHHHHHTTCEEEEEEEECTTSCCEEEEEECTTSCEEEEEEC-----
T ss_pred             HHHHHHHHHcCCCeecCCccccCCCeEEEEEECCCCCEEEEEECCCccc
Confidence            99999999999877          4678899999999999998876543

>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Antibiotic resistance proteins
domain: Hypothetical protein BC3580
species: Bacillus cereus [TaxId: 1396]

Probab=99.48  E-value=2.7e-13  Score=84.01  Aligned_cols=91  Identities=12%  Similarity=0.087  Sum_probs=61.9

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEE--cCeEEEEecCCCC--C---ccccCCCcceEEEEEeCC---HHHHHHHHHhC
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEI--AGSTFLVSNFSND--S---AAAKNMGIGCVLCLEIDD---VEAALAKAMSG   84 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~--~~~~l~~~~~~~~--g---~~~~~~~~~~~l~l~v~d---vd~~~~~~~~~   84 (117)
                      -.|.|+  |++++.+||+++||.++..  ++..+........  .   ......+...++.|.|+|   +++.++++.++
T Consensus         7 i~l~v~--Dl~~a~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~f~v~~~~~v~~~~~~l~~~   84 (113)
T d1xqaa_           7 LNLTVA--DVVAAREFLEKYFGLTCSGTRGNAFAVMRDNDGFILTLMKGKEVQYPKTFHVGFPQESEEQVDKINQRLKED   84 (113)
T ss_dssp             EEEEES--CHHHHHHHHHHHHCCEEEEEETTTEEEEECTTCCEEEEEECSSCCCCTTCCEEEECSSHHHHHHHHHHHHHT
T ss_pred             EEEEeC--CHHHHHHHHHHhhCCEEEEeecCcceeeeecceeeeeeeeeecccccccceeeeeeccccchhhhhhhHHHc
Confidence            456777  9999999999999965532  3333332222110  0   001112244678888875   67889999999


Q ss_pred             CCee------eceEEEEECCCCCeEEEec
Q 044588           85 GVWA------TGRVGKVKDPCGFTWLIYS  107 (117)
Q Consensus        85 G~~v------g~r~~~v~DP~G~~w~l~~  107 (117)
                      |.++      +.+.++++||+||.|+|.+
T Consensus        85 G~~~~~~~~~~~~~~~~~DPdG~~iEi~c  113 (113)
T d1xqaa_          85 GFLVEPPKHAHAYTFYVEAPGGFTIEVMC  113 (113)
T ss_dssp             TCCCCCCEEC-CEEEEEEETTTEEEEEEC
T ss_pred             CCccccCCCCceEEEEEECCCCCEEEEEC
Confidence            9988      4677899999999999964

>d1ss4a_ d.32.1.6 (A:) Hypothetical protein BC1747 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Hypothetical protein BC1747
domain: Hypothetical protein BC1747
species: Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]

Probab=99.48  E-value=6.2e-13  Score=85.84  Aligned_cols=45  Identities=9%  Similarity=0.164  Sum_probs=40.7

Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEeccc
Q 044588           65 CVLCLEIDDVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        65 ~~l~l~v~dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      .+++|.|+|+++.++++.+.|+++         +.+.++++||+|+.|+|+++.
T Consensus        95 ~hi~~~v~d~~~~~~~l~~~G~~~~~~~~~~~~~~~~~~~~DPdG~~iEl~e~~  148 (149)
T d1ss4a_          95 LRVMFTVEDIDEMVSRLTKHGAELVGEVVQYENSYRLCYIRGVEGILIGLAEEL  148 (149)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCEESSCCEEETTTEEEEEEECGGGCEEEEEEEC
T ss_pred             eEEEEeechhHHHHHHHHHCCCeEccCCeECCCCeEEEEEECCCCCEEEEEEcc
Confidence            479999999999999999999987         457889999999999999864

>d1f1ua1 d.32.1.3 (A:2-147) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=99.42  E-value=3.6e-12  Score=82.98  Aligned_cols=96  Identities=17%  Similarity=0.289  Sum_probs=64.4

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCCC---CCcc--ccCCCcceEEEEEeC---CHHHHHHHHHhC
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFSN---DSAA--AKNMGIGCVLCLEID---DVEAALAKAMSG   84 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~~---~g~~--~~~~~~~~~l~l~v~---dvd~~~~~~~~~   84 (117)
                      .-.|.|+  |++++++||+++||.++... +....+.....   ....  ......--++.+.+.   |++++.+++.++
T Consensus        19 hv~l~v~--Dl~~s~~FY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~dl~~~~~~l~~~   96 (146)
T d1f1ua1          19 YMEIVVT--DLAKSREFYVDVLGLHVTEEDENTIYLRSLEEFIHHNLVLRQGPIAAVAAFAYRVKSPAEVDAAEAYYKEL   96 (146)
T ss_dssp             EEEEEES--CHHHHHHHHTTTTCCEEEEECSSEEEEECTTCCSSCSEEEEECSSCEEEEEEEEESSHHHHHHHHHHHHHT
T ss_pred             EEEEEeC--CHHHHHHHHHhccCcEEEeecCCceeeecccccccceeeccccCCCCCceeeEeeccchhHHHHHHHHHHc
Confidence            3345556  99999999999999776543 33443322111   1111  111112236677765   788999999999


Q ss_pred             CCee---------e-ceEEEEECCCCCeEEEecccCC
Q 044588           85 GVWA---------T-GRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        85 G~~v---------g-~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      |.++         | .+..+|+||+||.|+|+...+.
T Consensus        97 G~~~~~~~~~~~~g~~~~~~~~DPdG~~iEl~~~~e~  133 (146)
T d1f1ua1          97 GCRTERRKEGFTKGIGDSVRVEDPLGFPYEFFYETEH  133 (146)
T ss_dssp             TCCEEEETTCSSTTBCSEEEEECTTSCEEEEECCBCC
T ss_pred             CCceeeccccccCCceEEEEEECCCCcEEEEEEeccc
Confidence            9977         2 4677999999999999986543

>d1qipa_ d.32.1.1 (A:) Glyoxalase I (lactoylglutathione lyase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=4.8e-12  Score=84.23  Aligned_cols=47  Identities=23%  Similarity=0.237  Sum_probs=41.8

Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCee--------eceEEEEECCCCCeEEEecccCC
Q 044588           65 CVLCLEIDDVEAALAKAMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVKK  111 (117)
Q Consensus        65 ~~l~l~v~dvd~~~~~~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~~  111 (117)
                      .++++.++|+++.++++.++|+++        +.++++++||+||.|+|.++.+-
T Consensus       118 ~h~~~~~~d~~~~~~~l~~~Gv~~~~~p~~g~~~~~~f~~DPdG~~IElvq~~~~  172 (176)
T d1qipa_         118 GHIGIAVPDVYSACKRFEELGVKFVKKPDDGKMKGLAFIQDPDGYWIEILNPNKM  172 (176)
T ss_dssp             EEEEEECSCHHHHHHHHHHTTCEEEECTTSSSSTTCEEEECTTCCEEEEECTTTG
T ss_pred             eEEEeeHHHHHHHHHHHHHCCCEEeeCCccCCceEEEEEECCCCCEEEEEeCCCC
Confidence            478899999999999999999988        35678899999999999998764

>d1lgta1 d.32.1.3 (A:2-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId: 292]

Probab=99.39  E-value=2.7e-12  Score=82.33  Aligned_cols=94  Identities=14%  Similarity=0.030  Sum_probs=62.1

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecCC-CCCc--cccCCCcceEEEEEeC---CHHHHHHHHHhCCCee
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNFS-NDSA--AAKNMGIGCVLCLEID---DVEAALAKAMSGGVWA   88 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~~-~~g~--~~~~~~~~~~l~l~v~---dvd~~~~~~~~~G~~v   88 (117)
                      +|.+.+.|++++++||+++||.++... +..+.+.-.. ....  .......-.++.+.|.   |++++.+++.++|.++
T Consensus         7 hv~i~V~Dl~~s~~FY~~vLG~~~~~~~~~~~~l~~~~~~~~l~l~~~~~~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~   86 (131)
T d1lgta1           7 YMGFAVSDVAAWRSFLTQKLGLMEAGTTDNGDLFRIDSRAWRIAVQQGEVDDLAFAGYEVADAAGLAQMADKLKQAGIAV   86 (131)
T ss_dssp             EEEEEESCHHHHHHHHHHTTCCEEEEEETTEEEEESSSBSCSEEEEECTTCEEEEEEEEESSHHHHHHHHHHHHHTTCCC
T ss_pred             EEEEEeCCHHHHHHHHHHhhCCceeecCCcceEEeecCCceEEEEecCCCCCceEEEEEEccHHHHHHHHHHHHHcCCce
Confidence            344444499999999999999665433 3344443211 1110  0111113456778774   6778999999999877


Q ss_pred             ------------eceEEEEECCCCCeEEEeccc
Q 044588           89 ------------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        89 ------------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                                  +.+..+++||+||.|+|+...
T Consensus        87 ~~~~~~~~~~~~~~~~~~f~DPdGn~iE~~~~~  119 (131)
T d1lgta1          87 TTGDASLARRRGVTGLITFADPFGLPLEIYYGA  119 (131)
T ss_dssp             EECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             EECCccccccCCceEEEEEECCCCCEEEEEeCC
Confidence                        246789999999999997643

>d2c21a1 d.32.1.1 (A:3-141) Glyoxalase I (lactoylglutathione lyase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Glyoxalase I (lactoylglutathione lyase)
domain: Glyoxalase I (lactoylglutathione lyase)
species: Leishmania major [TaxId: 5664]

Probab=99.34  E-value=4.1e-12  Score=79.98  Aligned_cols=94  Identities=17%  Similarity=0.186  Sum_probs=63.7

Q ss_pred             eEEEEecCCCHHHHHHHHHhhhCeEEEE----c-CeEEEEe--cCCC-C----------Cccc-cCCCcceEEEEEeCCH
Q 044588           14 KPQLLVEESKATNVVQFYKTTSGAQLEI----A-GSTFLVS--NFSN-D----------SAAA-KNMGIGCVLCLEIDDV   74 (117)
Q Consensus        14 ~p~L~v~~~D~~~a~~FY~~~fG~~l~~----~-~~~l~~~--~~~~-~----------g~~~-~~~~~~~~l~l~v~dv   74 (117)
                      ...|.|.  |+++|++||+++||.++..    . .....+.  .... .          +... ........+.+.++++
T Consensus         6 Hv~l~V~--Dl~~s~~FY~~~LG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (139)
T d2c21a1           6 HTMIRVG--DLDRSIKFYTERLGMKVLRKWDVPEDKYTLVFLGYGPEMSSTVLELTYNYGVTSYKHDEAYGHIAIGVEDV   83 (139)
T ss_dssp             EEEEECS--CHHHHHHHHHHTTCCEEEEEEEEGGGTEEEEEEESSCTTTSCEEEEEEETTCCCCCCCSSEEEEEEEESCH
T ss_pred             EEEEEeC--CHHHHHHHHHHHhCCEeeccccccccceeeeeecccccccccccccccccCcccccCCCccceeeeehhhH
Confidence            4567777  9999999999999955432    1 1111111  1100 0          0000 0111335677889999


Q ss_pred             HHHHHHHHhCCCee-----eceEEEEECCCCCeEEEeccc
Q 044588           75 EAALAKAMSGGVWA-----TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        75 d~~~~~~~~~G~~v-----g~r~~~v~DP~G~~w~l~~~~  109 (117)
                      ++.++++...+.++     |.++++|+||+||.|+|++..
T Consensus        84 ~~~~~~~~~~~~~~~~~~~g~~~~~~~DPdGn~iEl~~~~  123 (139)
T d2c21a1          84 KELVADMRKHDVPIDYEDESGFMAFVVDPDGYYIELLNEK  123 (139)
T ss_dssp             HHHHHHHHHTTCCEEEECSSSSEEEEECTTSCEEEEEEHH
T ss_pred             HHHHHHHHHcCCceeeCCCCcEEEEEECCCCCEEEEEECC
Confidence            99999999999877     678999999999999999854

>d1zswa1 d.32.1.10 (A:1-144) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.33  E-value=5.6e-11  Score=76.43  Aligned_cols=93  Identities=11%  Similarity=0.051  Sum_probs=61.3

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE----cC--eE--EEEecCCC------------CCccccCCCcc-eEEEEEeCC-
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI----AG--ST--FLVSNFSN------------DSAAAKNMGIG-CVLCLEIDD-   73 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~----~~--~~--l~~~~~~~------------~g~~~~~~~~~-~~l~l~v~d-   73 (117)
                      .|.|+  |++++++||+++||+++..    .+  ..  +.+.....            ...+.....++ -+++|.|+| 
T Consensus        11 ~l~v~--Dl~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Hiaf~v~~~   88 (144)
T d1zswa1          11 SMVTK--NANENNHFYKNVLGLRRVKMTVNQDDPSMYHLFYGDKTGSPGTELSFFEIPLVGRTYRGTNAITRIGLLVPSE   88 (144)
T ss_dssp             EEEES--CHHHHHHHHHTTTCCEEEEEEEETTEEEEEEEEEESTTCCTTSEEEEEECTTCCBCBCCBSEEEEEEEEESCH
T ss_pred             EEEeC--CHHHHHHHHHHHhCCeeEeeeccccCCceeEEEecccccceeeEEeecccccccCCccCCCceeEEEEecCCc
Confidence            45556  9999999999999965431    11  11  11111110            00111111123 378899987 


Q ss_pred             --HHHHHHHHHhCCCee-------eceEEEEECCCCCeEEEecccC
Q 044588           74 --VEAALAKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        74 --vd~~~~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                        ++++.+++.+.|..+       +.+..+|+||+||.|+|.++..
T Consensus        89 ~~l~~~~~~l~~~gv~~~~~~~~~~~~~~yf~DPdG~~iEl~~~~~  134 (144)
T d1zswa1          89 DSLHYWKERFEKFDVKHSEMTTYANRPALQFEDAEGLRLVLLVSNG  134 (144)
T ss_dssp             HHHHHHHHHHHHTTCEECCSEEETTEEEEEEECTTCCEEEEEECTT
T ss_pred             hhHHHHhhhhhccceeeeCccccCCeEEEEEECCCCCEEEEEEeCC
Confidence              677889999999887       5677899999999999987654

>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Methylmalonyl-CoA epimerase
domain: Methylmalonyl-CoA epimerase
species: Propionibacterium shermanii [TaxId: 1752]

Probab=99.32  E-value=2.5e-12  Score=82.27  Aligned_cols=93  Identities=19%  Similarity=0.153  Sum_probs=60.9

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEE----E------------------cCeEEEEecCCC-CCcc-----ccCCCcc-e
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLE----I------------------AGSTFLVSNFSN-DSAA-----AKNMGIG-C   65 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~----~------------------~~~~l~~~~~~~-~g~~-----~~~~~~~-~   65 (117)
                      ..|.|+  |+++|++||+++||.+..    .                  ++..+.+..... ....     ......| .
T Consensus        11 i~i~v~--Dl~~a~~fY~~~lG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~g~~   88 (145)
T d1jc4a_          11 VAYACP--DADEASKYYQETFGWHELHREENPEQGVVEIMMAPAAKLTEHMTQVQVMAPLNDESTVAKWLAKHNGRAGLH   88 (145)
T ss_dssp             EEEECS--CHHHHHHHHHHHHCCEEEEEEEETTTTEEEEEEESSSSCCTTCCEEEEEEESSTTSHHHHHHHHTTTCCEEE
T ss_pred             EEEEeC--CHHHHHHHHHhhccCceeeeeeecccceEEEeeeceeccccccchhhhhhhhcccCcccccccccCCCCcce
Confidence            345566  999999999999994321    1                  111222221111 0100     0111234 5


Q ss_pred             EEEEEeCCHHHHHHHHHhCCCee----------eceEEEE--ECCCCCeEEEeccc
Q 044588           66 VLCLEIDDVEAALAKAMSGGVWA----------TGRVGKV--KDPCGFTWLIYSPV  109 (117)
Q Consensus        66 ~l~l~v~dvd~~~~~~~~~G~~v----------g~r~~~v--~DP~G~~w~l~~~~  109 (117)
                      ++++.|+|++++++++.++|+++          |.+.+++  +||+|++|+|.+..
T Consensus        89 Hia~~v~di~~~~~~l~~~Gv~~~~~~~~~~~~g~~~~f~~p~dp~G~~iEl~e~p  144 (145)
T d1jc4a_          89 HMAWRVDDIDAVSATLRERGVQLLYDEPKLGTGGNRINFMHPKSGKGVLIELTQYP  144 (145)
T ss_dssp             EEEEECSCHHHHHHHHHHHTCCBSCSSCEECSSSCEEEEBCGGGGTTSCEEEEECC
T ss_pred             EEEEecchHHHHHHHHHHCCCEEeCCCceECCCCCEEEEEeccCCCCeEEEEEECC
Confidence            79999999999999999999987          3445555  79999999999864

>d1mpya2 d.32.1.3 (A:146-307) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.31  E-value=3.2e-11  Score=79.75  Aligned_cols=100  Identities=12%  Similarity=0.103  Sum_probs=63.9

Q ss_pred             CCcce-eEEEEecCCCHHHHHHHHHhhhCeEEEE----c-CeEE-EEecCCC--CCc--c-ccCCCcceEEEEEeCCHH-
Q 044588            9 NFMGM-KPQLLVEESKATNVVQFYKTTSGAQLEI----A-GSTF-LVSNFSN--DSA--A-AKNMGIGCVLCLEIDDVE-   75 (117)
Q Consensus         9 ~~~~~-~p~L~v~~~D~~~a~~FY~~~fG~~l~~----~-~~~l-~~~~~~~--~g~--~-~~~~~~~~~l~l~v~dvd-   75 (117)
                      +.+++ ...|.|+  |++++++||+++||.++.-    . +... .......  ...  . ...++...++.+.+++.+ 
T Consensus         2 ~~~rldHv~l~v~--Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~   79 (162)
T d1mpya2           2 AAVRFDHALMYGD--ELPATYDLFTKVLGFYLAEQVLDENGTRVAQFLSLSTKAHDVAFIHHPEKGRLHHVSFHLETWED   79 (162)
T ss_dssp             CCCEEEEEEEEES--CHHHHHHHHHHTTCCEEEEEEECTTCCEEEEEEESSSBSCSEEEEECSSSSEEEEEEEECSCHHH
T ss_pred             CcccccEEEEECC--CHHHHHHHHHHccCCEEEEEEccccccceeeeeecccccccccccccCCCCccceeEEEEeeehh
Confidence            33443 4466777  9999999999999965531    1 1222 2221111  110  0 111223457788877554 


Q ss_pred             --HHHHHHHhCCCee---------e-ceEEEEECCCCCeEEEecccC
Q 044588           76 --AALAKAMSGGVWA---------T-GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        76 --~~~~~~~~~G~~v---------g-~r~~~v~DP~G~~w~l~~~~~  110 (117)
                        ++++++.+.|.++         | .+.++++||+||.|+|.+..+
T Consensus        80 ~~~~~~~L~~~gv~~~~~p~~~~~g~~~~~y~~DPdGn~iEl~~~~~  126 (162)
T d1mpya2          80 LLRAADLISMTDTSIDIGPTRHGLTHGKTIYFFDPSGNRNEVFCGGD  126 (162)
T ss_dssp             HHHHHHHHHHHTCCEEEEEEECSSTTCEEEEEECTTSCEEEEEECCC
T ss_pred             hhhHHHHHHHcCCccccCccccCCCCeEEEEEECCCCCEEEEEECCc
Confidence              7889999999877         2 367899999999999987654

>d1kw3b1 d.32.1.3 (B:1-132) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=99.31  E-value=1.1e-11  Score=79.53  Aligned_cols=92  Identities=20%  Similarity=0.138  Sum_probs=61.7

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEEecC-CCCCcc--ccCCCcceEEEEEeC---CHHHHHHHHHhCCCee
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLVSNF-SNDSAA--AKNMGIGCVLCLEID---DVEAALAKAMSGGVWA   88 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~~~~-~~~g~~--~~~~~~~~~l~l~v~---dvd~~~~~~~~~G~~v   88 (117)
                      .|.|+  |++++.+||+++||.++.-. +..+.+... ......  ......-.++.+.|+   |++++.+++.++|+++
T Consensus         9 ~i~v~--Dl~~s~~FY~~vLG~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~h~~f~v~~~~dl~~~~~~l~~~g~~~   86 (132)
T d1kw3b1           9 GFAVK--DVPAWDHFLTKSVGLMAAGSAGDAALYRADQRAWRIAVQPGELDDLAYAGLEVDDAAALERMADKLRQAGVAF   86 (132)
T ss_dssp             EEEES--CHHHHHHHHHHTTCCEEEEEETTEEEEESSSBSCSEEEEECTTCEEEEEEEECSSHHHHHHHHHHHHHHTCCC
T ss_pred             EEEeC--CHHHHHHHHHHHhCCceeccccceeeeeeeecceeeeeeccCCCCceEEEEEeccHHHHHHHHHHHHHcCCCc
Confidence            34555  99999999999999766432 334444321 111110  111113457788885   6788999999999987


Q ss_pred             ------------eceEEEEECCCCCeEEEeccc
Q 044588           89 ------------TGRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        89 ------------g~r~~~v~DP~G~~w~l~~~~  109 (117)
                                  +.+..+++||+||.|+|+...
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~DPdGn~iE~~~~~  119 (132)
T d1kw3b1          87 TRGDEALMQQRKVMGLLCLQDPFGLPLEIYYGP  119 (132)
T ss_dssp             EECCHHHHHHHTCSEEEEEECTTSCEEEEEECC
T ss_pred             eecCccccccCCcceEEEEECCCCCEEEEEECC
Confidence                        235679999999999998543

>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Catechol 2,3-dioxygenase (metapyrocatechase)
species: Pseudomonas putida, mt2 [TaxId: 303]

Probab=99.27  E-value=4.4e-11  Score=77.04  Aligned_cols=98  Identities=16%  Similarity=0.133  Sum_probs=62.5

Q ss_pred             ccee-EEEEecCCCHHHHHHHHHhhhCeEEEEc--Ce-EEEEecCCC-C-Cc--cccCCCcceEEE---EEeCCHHHHHH
Q 044588           11 MGMK-PQLLVEESKATNVVQFYKTTSGAQLEIA--GS-TFLVSNFSN-D-SA--AAKNMGIGCVLC---LEIDDVEAALA   79 (117)
Q Consensus        11 ~~~~-p~L~v~~~D~~~a~~FY~~~fG~~l~~~--~~-~l~~~~~~~-~-g~--~~~~~~~~~~l~---l~v~dvd~~~~   79 (117)
                      |++. ..|.|+  |++++.+||+++||.++...  +. ......... . ..  .........++.   ..++|+++.++
T Consensus         6 ~rl~Hv~l~v~--D~~~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~   83 (145)
T d1mpya1           6 MRPGHVQLRVL--DMSKALEHYVELLGLIEMDRDDQGRVYLKAWTEVDKFSLVLREADEPGMDFMGFKVVDEDALRQLER   83 (145)
T ss_dssp             EEEEEEEEEES--CHHHHHHHHHHTTCCEEEEECTTSCEEEECTTCCBSCSEEEEECSSCEEEEEEEEESCHHHHHHHHH
T ss_pred             cEeeeEEEEeC--CHHHHHHHHHHhhCCEEEEeeccCccceecccccceeeccccccCcccceeeeeeehhHHHHHHHHH
Confidence            4443 456777  99999999999999766532  22 222222111 0 00  001111122333   34568999999


Q ss_pred             HHHhCCCee---------e-ceEEEEECCCCCeEEEecccC
Q 044588           80 KAMSGGVWA---------T-GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        80 ~~~~~G~~v---------g-~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      +|.++|+.+         | .+..+|+||+||.|+|++..+
T Consensus        84 ~L~~~g~~~~~~~~~~~~g~~~~~~f~DPdG~~iEl~~~~e  124 (145)
T d1mpya1          84 DLMAYGCAVEQLPAGELNSCGRRVRFQAPSGHHFELYADKE  124 (145)
T ss_dssp             HHHHHTCCCEEECTTSSTTBCCEEEEECTTSCEEEEESCBC
T ss_pred             HHHHCCCcEEECCCcccCCceEEEEEECCCCCEEEEEEecc
Confidence            999999877         2 478999999999999997544

>d1zswa2 d.32.1.10 (A:145-314) Hypothetical protein BC1024 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: BC1024-like
domain: Hypothetical protein BC1024
species: Bacillus cereus [TaxId: 1396]

Probab=99.23  E-value=7.5e-11  Score=78.75  Aligned_cols=92  Identities=10%  Similarity=0.010  Sum_probs=61.4

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEEEEc-CeEEEE-ecCC-CC--------Cc-cccCCCcce-EEEEEeCC---HHHHH
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQLEIA-GSTFLV-SNFS-ND--------SA-AAKNMGIGC-VLCLEIDD---VEAAL   78 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l~~~-~~~l~~-~~~~-~~--------g~-~~~~~~~~~-~l~l~v~d---vd~~~   78 (117)
                      ..|.|.  |++++.+||+++||.++... +....+ .... ..        .. ...+...++ +|.|.|+|   +++++
T Consensus        16 V~L~V~--Dle~s~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HiAf~V~~~~~l~~~~   93 (170)
T d1zswa2          16 VELTVR--RLDKMASTLTEIFGYTEVSRNDQEAIFQSIKGEAFGEIVVKYLDGPTEKPGRGSIHHLAIRVKNDAELAYWE   93 (170)
T ss_dssp             EEEEES--CHHHHHHHHHHTTCCEEEEECSSEEEEESSTTCSTTCEEEEECCSSBCBCCBTCEEEEEEEESSHHHHHHHH
T ss_pred             EEEEeC--CHHHHHHHHHHHhCCEEEeecCceEEEEeccCccceEEEeccccccccccCccccceEEEEeCChHHHHHHH
Confidence            356677  99999999999999665432 222222 1111 00        01 111111234 79999975   67889


Q ss_pred             HHHHhCCCee-------eceEEEEECCCCCeEEEecc
Q 044588           79 AKAMSGGVWA-------TGRVGKVKDPCGFTWLIYSP  108 (117)
Q Consensus        79 ~~~~~~G~~v-------g~r~~~v~DP~G~~w~l~~~  108 (117)
                      +++.+.|..+       +.+-.+++||+||.|+|++.
T Consensus        94 ~~l~~~G~~~~~~~~~~~~~s~Yf~DPdG~~iEl~t~  130 (170)
T d1zswa2          94 EQVKQRGFHSSGIIDRFYFKSLYFRESNGILFEIATD  130 (170)
T ss_dssp             HHHHHTTCCCCCCEECSSEEEEEEECTTCCEEEEEEE
T ss_pred             HHHHhcCCCccccccCCCEEEEEEECCCCcEEEEEEC
Confidence            9999999988       24556999999999999874

>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=99.18  E-value=1.9e-10  Score=75.81  Aligned_cols=92  Identities=20%  Similarity=0.255  Sum_probs=63.1

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE------------------EcCeEEEEecCCCCCcc--------ccCCCcc-eEEE
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE------------------IAGSTFLVSNFSNDSAA--------AKNMGIG-CVLC   68 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~------------------~~~~~l~~~~~~~~g~~--------~~~~~~~-~~l~   68 (117)
                      .|.|.  |+++|++||+++||.++.                  .++..+.+.........        ....+.+ .+|+
T Consensus        12 ~i~V~--D~~~a~~fY~~~lGf~~v~~~~~~~~~~~~~~~~l~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~g~G~~hia   89 (163)
T d1t47a1          12 VFAVG--NAKQAAHYYSTAFGMQLVAYSGPENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGVVDLA   89 (163)
T ss_dssp             EEECS--CHHHHHHHHHHTSCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSCCSHHHHHHHHHHHHHCSEEEEEE
T ss_pred             EEEeC--CHHHHHHHHHHHhCCeEEeeecccccceeEEEEEEecCCEEEEEeccCCCCCccccccchhhhcCCCceEEEE
Confidence            44566  999999999999994332                  12233333322110000        0011234 5899


Q ss_pred             EEeCCHHHHHHHHHhCCCee-----------e-ceEEEEECCCCCeEEEeccc
Q 044588           69 LEIDDVEAALAKAMSGGVWA-----------T-GRVGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        69 l~v~dvd~~~~~~~~~G~~v-----------g-~r~~~v~DP~G~~w~l~~~~  109 (117)
                      |.|+|+++++++|+++|+++           | .+++++++|.|.+..|.++.
T Consensus        90 f~VdDid~a~~~l~~~Ga~~~~~P~~~~d~~G~v~~a~I~~~g~~~~~lier~  142 (163)
T d1t47a1          90 IEVPDARAAHAYAIEHGARSVAEPYELKDEHGTVVLAAIATYGKTRHTLVDRT  142 (163)
T ss_dssp             EECSCHHHHHHHHHHTTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEE
T ss_pred             EeeCCHHHHHHHHHHCCCeEEecCcceeCCCCEEEEEEEecCCCceEEEEecc
Confidence            99999999999999999987           2 36889999999999998764

>d1sqia1 d.32.1.3 (A:8-156) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=2.7e-10  Score=73.89  Aligned_cols=94  Identities=17%  Similarity=0.189  Sum_probs=63.1

Q ss_pred             EEEEecCCCHHHHHHHHHhhhCeEE------------------EEcCeEEEEecCCC-CCccc----cCCCcc-eEEEEE
Q 044588           15 PQLLVEESKATNVVQFYKTTSGAQL------------------EIAGSTFLVSNFSN-DSAAA----KNMGIG-CVLCLE   70 (117)
Q Consensus        15 p~L~v~~~D~~~a~~FY~~~fG~~l------------------~~~~~~l~~~~~~~-~g~~~----~~~~~~-~~l~l~   70 (117)
                      ..|.|.  |+++|++||+++||.+.                  ..++..+.+..... .+.+.    ...+.+ .+|+|.
T Consensus        15 i~i~V~--Dl~~a~~fY~~~lGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~g~G~~hiaf~   92 (149)
T d1sqia1          15 VTFWVG--NAKQAASFYCNKMGFEPLAYKGLETGSREVVSHVIKQGKIVFVLCSALNPWNKEMGDHLVKHGDGVKDIAFE   92 (149)
T ss_dssp             EEEECS--CHHHHHHHHHHHHCCEEEEEESGGGTCCSEEEEEEEETTEEEEEEEESSTTCHHHHHHHHHHCSEEEEEEEE
T ss_pred             EEEEcC--CHHHHHHHHhhccceEEEEEecccCCceEEEEEEecCCcEEEEEEeccCCCCchhhhhhhhCCCeEEEEEEE
Confidence            344566  99999999999999332                  12233444432211 11110    111245 489999


Q ss_pred             eCCHHHHHHHHHhCCCee-----------e-ceEEEEECCCCCeEEEecccC
Q 044588           71 IDDVEAALAKAMSGGVWA-----------T-GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        71 v~dvd~~~~~~~~~G~~v-----------g-~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      |+|+++++++++++|+++           | .+++.++.|.|+...|++...
T Consensus        93 V~di~~~~~~l~~~G~~~~~~P~~~~d~~G~v~~a~i~~~g~~~~~lier~~  144 (149)
T d1sqia1          93 VEDCEHIVQKARERGAKIVREPWVEEDKFGKVKFAVLQTYGDTTHTLVEKIN  144 (149)
T ss_dssp             EECHHHHHHHHHHHTCCEEEEEEEEEETTEEEEEEEEECSTTCEEEEEEEES
T ss_pred             eccHHHHHHHHHHCCCEEccCCeEEECCCCeEEEEEEECCCCCEEEEEEeCC
Confidence            999999999999999987           2 257888887778889988653

>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.00  E-value=5.6e-09  Score=68.70  Aligned_cols=50  Identities=16%  Similarity=0.188  Sum_probs=41.6

Q ss_pred             eEEEEEeCCHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecccCCCCc
Q 044588           65 CVLCLEIDDVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVKKCAD  114 (117)
Q Consensus        65 ~~l~l~v~dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~~~~~  114 (117)
                      .+|+|.|+|+++++++|.++|+++         |.|+++++.+.+.+..|.++....++
T Consensus       106 ~Hiaf~VdDi~aa~~~l~~~G~~~~~~P~~~~~~~~~a~I~~~gd~~~~~v~r~~~~~~  164 (167)
T d1sqda1         106 RAVAIEVEDAESAFSISVANGAIPSSPPIVLNEAVTIAEVKLYGDVVLRYVSYKAEDTE  164 (167)
T ss_dssp             EEEEEEESCHHHHHHHHHHTTCCEEEEEEEETTTEEEEEEEEETTEEEEEEEECCC---
T ss_pred             eEEEEEeCCHHHHHHHHHHCCCEEecCCeecCCCEEEEEEEccCCcEEEEEecCCCccc
Confidence            589999999999999999999987         57889999987778889888655443

>d1sp8a1 d.32.1.3 (A:36-207) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=98.98  E-value=4.6e-09  Score=69.79  Aligned_cols=48  Identities=17%  Similarity=0.159  Sum_probs=40.9

Q ss_pred             cc-eEEEEEeCCHHHHHHHHHhCCCee---------eceEEEEECCCCCeEEEecccC
Q 044588           63 IG-CVLCLEIDDVEAALAKAMSGGVWA---------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        63 ~~-~~l~l~v~dvd~~~~~~~~~G~~v---------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      .| .+|+|.|+|+++++++++++|+++         |.|++.++-+.+.+..|++...
T Consensus        98 ~Gi~Hiaf~VdDi~aa~~~l~~~Ga~~~~~P~~~~~g~~~a~v~~~g~~~~~lve~~~  155 (172)
T d1sp8a1          98 LAVRAVALRVADAEDAFRASVAAGARPAFGPVDLGRGFRLAEVELYGDVVLRYVSYPD  155 (172)
T ss_dssp             SEEEEEEEEESCHHHHHHHHHTTTCCEEEEEEEEETTEEEEEEEEETTEEEEEEECCT
T ss_pred             CceEEEEEeeCcHHHHHHHHHHCcCEeccCCccCCCCEEEEEEECCCCcEEEEEecCC
Confidence            35 489999999999999999999988         5678899888777779988764

>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme)
species: Pseudomonas sp. [TaxId: 306]

Probab=98.96  E-value=5.1e-09  Score=68.71  Aligned_cols=92  Identities=13%  Similarity=0.038  Sum_probs=58.3

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEEE------c-CeE--EEEecCCC--CCcc--ccCCCcc-eEEEEEeCC---HHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLEI------A-GST--FLVSNFSN--DSAA--AKNMGIG-CVLCLEIDD---VEAAL   78 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~~------~-~~~--l~~~~~~~--~g~~--~~~~~~~-~~l~l~v~d---vd~~~   78 (117)
                      .|.+.  |++++.+||+++||.++.-      . +..  +.+.....  +...  ..+...+ .++.|.|++   +++++
T Consensus        15 ~l~v~--D~e~t~~FY~~vLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~a~~~~~~~~gl~Hiaf~v~~~ddv~~~~   92 (156)
T d1kw3b2          15 VRCVP--DTAKAMAFYTEVLGFVLSDIIDIQMGPETSVPAHFLHCNGRHHTIALAAFPIPKRIHHFMLQANTIDDVGYAF   92 (156)
T ss_dssp             EEECS--CHHHHHHHHHHTTCCEEEEEEEEEEETTEEEEEEEEESSSBSCSEEEECCSCSSSEEEEEEEBSSHHHHHHHH
T ss_pred             EEecC--CHHHHHHHHHHhcCceeeeEEeeccCCCCcceeEEEeeccccceeeeccCCCCCceeEEEEECCCHHHHHHHH
Confidence            35566  9999999999999965431      1 111  22222111  1111  1111134 589999974   55679


Q ss_pred             HHHHhCCCee--------e-ceEEEEECCCCC-eEEEeccc
Q 044588           79 AKAMSGGVWA--------T-GRVGKVKDPCGF-TWLIYSPV  109 (117)
Q Consensus        79 ~~~~~~G~~v--------g-~r~~~v~DP~G~-~w~l~~~~  109 (117)
                      +++.++|..+        + ....+++||+|+ .+++....
T Consensus        93 d~l~~~G~~~~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~  133 (156)
T d1kw3b2          93 DRLDAAGRITSLLGRHTNDQTLSFYADTPSPMIEVEFGWGP  133 (156)
T ss_dssp             HHHHHTTCBCBCSEEESSSCCEEEEEECSSTTCEEEEEECC
T ss_pred             HHHHhcCCceecCcccCCCCeEEEEEECCCCCeEEEEecCC
Confidence            9999999766        2 357899999998 58886643

>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: Homoprotocatechuate 2,3-dioxygenase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=98.89  E-value=1.7e-08  Score=67.33  Aligned_cols=92  Identities=13%  Similarity=0.061  Sum_probs=57.3

Q ss_pred             EEEecCCCHHHHHHHHHhhhCeEEE--E--c-CeEE-EEecCCC--CCcc--ccCCCcceEEEEEeCCH---HHHHHHHH
Q 044588           16 QLLVEESKATNVVQFYKTTSGAQLE--I--A-GSTF-LVSNFSN--DSAA--AKNMGIGCVLCLEIDDV---EAALAKAM   82 (117)
Q Consensus        16 ~L~v~~~D~~~a~~FY~~~fG~~l~--~--~-~~~l-~~~~~~~--~g~~--~~~~~~~~~l~l~v~dv---d~~~~~~~   82 (117)
                      .|.|.  |++++++|| ++||.++.  +  . +..+ .+.....  ....  ..+.+.--++.+.+.++   ++..+++.
T Consensus        10 ~l~v~--Dle~s~~FY-e~LGf~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~~f~~~~~~~v~~~~~~l~   86 (176)
T d1f1ua2          10 NQVTP--DVPRGRAYL-EDLGFRVSEDIKDSDGVTYAAWMHRKQTVHDTALTGGNGPRMHHVAFATHEKHNIIQICDKMG   86 (176)
T ss_dssp             EEEES--CHHHHHHHH-HHTTCEEEEEEECTTCCEEEEEEESSSSSCSEEEEESSBSEEEEEEEECSSHHHHHHHHHHHH
T ss_pred             EEEcC--CHHHHHHHH-HHCCCEEEEEEecCCcceeeeeeccCccccceecccccCCCccceeEEeccchhHHHHHHHHH
Confidence            45666  999999999 68996553  1  2 2222 2222111  1111  11111335788887754   56678888


Q ss_pred             hCCCee-----------e-ceEEEEECCCCCeEEEecccC
Q 044588           83 SGGVWA-----------T-GRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        83 ~~G~~v-----------g-~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      ++|...           | ..+.+++||+||.++|++...
T Consensus        87 ~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~  126 (176)
T d1f1ua2          87 ALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDY  126 (176)
T ss_dssp             HTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCC
T ss_pred             HcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCc
Confidence            888753           2 346799999999999988654

>d1cjxa1 d.32.1.3 (A:4-153) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=98.33  E-value=8.8e-07  Score=57.67  Aligned_cols=90  Identities=13%  Similarity=0.205  Sum_probs=61.3

Q ss_pred             EEecCCCHHHHHHHHHhhhCeEE------------EEcCeEEEEecCCCCCccc---cCCCcc-eEEEEEeCCHHHHHHH
Q 044588           17 LLVEESKATNVVQFYKTTSGAQL------------EIAGSTFLVSNFSNDSAAA---KNMGIG-CVLCLEIDDVEAALAK   80 (117)
Q Consensus        17 L~v~~~D~~~a~~FY~~~fG~~l------------~~~~~~l~~~~~~~~g~~~---~~~~~~-~~l~l~v~dvd~~~~~   80 (117)
                      +.|+  |++++.+||++ ||.+.            +-++..+++... +.+...   ...+.+ .+|.|.|+|+++++++
T Consensus        15 fav~--d~~~~~~~~~~-lGF~~~~~~~~~~~~l~~~G~i~ll~~~~-~~s~~~~~~~~hg~gv~hiaf~V~D~~~a~~~   90 (150)
T d1cjxa1          15 FASP--TPGTLEPIFEI-MGFTKVATHRSKNVHLYRQGEINLILNNE-PNSIASYFAAEHGPSVCGMAFRVKDSQKAYNR   90 (150)
T ss_dssp             EECS--STTSSHHHHHH-TTCEEEEEESSSSEEEEEETTEEEEEECC-SSSHHHHHHHHHSSEEEEEEEEESCHHHHHHH
T ss_pred             EecC--CHHHHHHHHHH-hCCEEEecccceEEEEEecCcEEEEecCC-CCCHhHhHHhhCCCceEEEEEEeCCHHHHHHH
Confidence            4455  99999999987 88221            222333333322 212111   111345 5899999999999999


Q ss_pred             HHhCCCee--------eceEEEEECCCCCeEEEecccC
Q 044588           81 AMSGGVWA--------TGRVGKVKDPCGFTWLIYSPVK  110 (117)
Q Consensus        81 ~~~~G~~v--------g~r~~~v~DP~G~~w~l~~~~~  110 (117)
                      |.++|+++        ...+..++++.|.++.|+++..
T Consensus        91 a~~~Ga~~i~~~~~~g~~~~~~i~g~gg~~i~Fv~~~~  128 (150)
T d1cjxa1          91 ALELGAQPIHIDTGPMELNLPAIKGIGGAPLYLIDRFG  128 (150)
T ss_dssp             HHHTTCCBCCCCCCTTCBCCCEEECGGGCEEEEECCCS
T ss_pred             HHHCCCEEcccCCCCCceeeeEEEcCCCCEEEEECcCC
Confidence            99999987        2357789999999999988654

>d1t47a2 d.32.1.3 (A:179-377) 4-hydroxyphenylpyruvate dioxygenase, HppD {Streptomyces avermitilis [TaxId: 33903]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Streptomyces avermitilis [TaxId: 33903]

Probab=97.70  E-value=0.00012  Score=49.52  Aligned_cols=48  Identities=19%  Similarity=0.293  Sum_probs=36.1

Q ss_pred             Ccce-EEEEEeCCHHHHHHHHHhCCCee-----------ece---------------EEEEECCCCCeEEEeccc
Q 044588           62 GIGC-VLCLEIDDVEAALAKAMSGGVWA-----------TGR---------------VGKVKDPCGFTWLIYSPV  109 (117)
Q Consensus        62 ~~~~-~l~l~v~dvd~~~~~~~~~G~~v-----------g~r---------------~~~v~DP~G~~w~l~~~~  109 (117)
                      +.|+ +|+|.|+|+.++.+++.++|.+.           ..|               .-+=+|+.|..++|++..
T Consensus        87 g~GiQHIAl~tdDI~~av~~L~~~G~~fL~~p~~YY~~l~~r~~~~~~~~~~l~~~~IL~D~d~~g~llqift~~  161 (199)
T d1t47a2          87 GAGVQHIALNTGDIVETVRTMRAAGVQFLDTPDSYYDTLGEWVGDTRVPVDTLRELKILADRDEDGYLLQIFTKP  161 (199)
T ss_dssp             SCEEEEEEEECSCHHHHHHHHHHTTCCBCCCCGGGTTSHHHHHCCCSSCHHHHHHHTCEEEECSSCEEEEEEBCC
T ss_pred             CCcceEEEEEcCCHHHHHHHHHHcCCCCCCCChHHHHHHHHHhcccccCHHHHHhcCeEEecCCCCeEEEEEecc
Confidence            3455 89999999999999999999977           111               123357788888887754

>d1sqia2 d.32.1.3 (A:157-366) 4-hydroxyphenylpyruvate dioxygenase, HppD {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=0.00016  Score=49.25  Aligned_cols=27  Identities=19%  Similarity=0.308  Sum_probs=24.2

Q ss_pred             Ccc-eEEEEEeCCHHHHHHHHHhCCCee
Q 044588           62 GIG-CVLCLEIDDVEAALAKAMSGGVWA   88 (117)
Q Consensus        62 ~~~-~~l~l~v~dvd~~~~~~~~~G~~v   88 (117)
                      |.| -+|.|.|+|+.++.++++++|.+.
T Consensus       105 G~GiQHIAf~t~DI~~av~~L~~~Gv~f  132 (210)
T d1sqia2         105 GAGVQHIALRTEDIITTIRHLRERGMEF  132 (210)
T ss_dssp             SSEEEEEEEEESCHHHHHHHHHHHTCCB
T ss_pred             CCCeeEEEEEcCCHHHHHHHHHHcCCCC
Confidence            455 499999999999999999999988

>d1cjxa2 d.32.1.3 (A:154-356) 4-hydroxyphenylpyruvate dioxygenase, HppD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=97.54  E-value=7.1e-05  Score=50.67  Aligned_cols=27  Identities=19%  Similarity=0.171  Sum_probs=24.2

Q ss_pred             Ccce-EEEEEeCCHHHHHHHHHhCCCee
Q 044588           62 GIGC-VLCLEIDDVEAALAKAMSGGVWA   88 (117)
Q Consensus        62 ~~~~-~l~l~v~dvd~~~~~~~~~G~~v   88 (117)
                      +.|+ +|+|.|+|+.++.+++.++|.+.
T Consensus        82 g~GiqHIAf~vdDI~aav~~L~~~Gv~f  109 (203)
T d1cjxa2          82 GEGIQHVAFLTDDLVKTWDALKKIGMRF  109 (203)
T ss_dssp             SSBCCEEEEEESCHHHHHHHHHHTTCCB
T ss_pred             CCCCceEEEEeCCHHHHHHHHHhcCCcc
Confidence            3565 99999999999999999999877

>d1sp8a2 d.32.1.3 (A:208-431) 4-hydroxyphenylpyruvate dioxygenase, HppD {Corn (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Corn (Zea mays) [TaxId: 4577]

Probab=97.49  E-value=0.00011  Score=50.50  Aligned_cols=25  Identities=24%  Similarity=0.268  Sum_probs=21.3

Q ss_pred             cce-EEEEEeCCHHHHHHHHHhCCCe
Q 044588           63 IGC-VLCLEIDDVEAALAKAMSGGVW   87 (117)
Q Consensus        63 ~~~-~l~l~v~dvd~~~~~~~~~G~~   87 (117)
                      .|+ +|+|.|+|++++.++|.++|++
T Consensus        90 ~GiqHIAf~vdDI~~av~~L~arGv~  115 (224)
T d1sp8a2          90 PGVQHMALASDDVLRTLREMQARSAM  115 (224)
T ss_dssp             SEEEEEEEEETTHHHHHHHHHTSGGG
T ss_pred             CCceeEEEEeCCHHHHHHHHHhcccc
Confidence            454 9999999999999999888744

>d1sqda2 d.32.1.3 (A:181-410) 4-hydroxyphenylpyruvate dioxygenase, HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a+b)
fold: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
superfamily: Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
family: Extradiol dioxygenases
domain: 4-hydroxyphenylpyruvate dioxygenase, HppD
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.49  E-value=0.0047  Score=42.21  Aligned_cols=25  Identities=24%  Similarity=0.268  Sum_probs=20.9

Q ss_pred             Ccc-eEEEEEeCCHHHHHHHHHhCCC
Q 044588           62 GIG-CVLCLEIDDVEAALAKAMSGGV   86 (117)
Q Consensus        62 ~~~-~~l~l~v~dvd~~~~~~~~~G~   86 (117)
                      |.| -+|+|.|+|+.++.++++++|.
T Consensus       102 G~GiQHIAf~tdDI~aav~~LrarG~  127 (230)
T d1sqda2         102 GAGLQHLALMSEDIFRTLREMRKRSS  127 (230)
T ss_dssp             SCEEEEEEEEESCHHHHHHHHHHHGG
T ss_pred             CCceeEEEEEeCCHHHHHHHHHHhhc
Confidence            345 4999999999999999988654