Citrus Sinensis ID: 044617

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-----
Protein Sequence
MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIKEDVDSTVSSQPNSSECRSQTMPVYS
Secondary Structure (PSIPRED)
cccEEEEEEccccccccccHHHHHHHHccccHHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHcccccHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHccccccccEEEEcccEEcccccEEEEEccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEccccccHHHHcccccccEEEEcccccHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccccEEcccccHHHHHHccccHcHHHHHccccHHHHHHHHHHHHHHccccHHHHHHHHHcccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHcccHHHHHEEEccccccccccEEEEEccccccccccccccccccccHHHHHHHHHHHccccccEEEEEEcccccccccHHcccccEEEccccccHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEccc
Coil and Loop (DISEMBL)
MADVVVVFDfdrtlidddsdnwVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHgllgcfseiytnptyvdeqgrlrilpyhdstlshhgcnlcpsnlckgfvldhvctsfgcgkqrfiylgdgrgdfcptlklrdcdfvmprknyplwdricsnpmLIKAKVHEWSSAEELKKILLHLIGAISikedvdstvssqpnssecrsqtmpvys
Flexible Loop (DISEMBL)
MADVVVVFDfdrtlidddsdnWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIKEdvdstvssqpnssecrsqtmpvys
Low Complexity Region (SEG)
MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIKEDVDSTVSSQPNSSECRSQTMPVYS
Disordered region (IsUnstruct)
***VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIK*************************
Disordered Region (DISOPRED)
MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIG*******************ECRSQTMP***
Disordered Region (DISEMBL)
MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIKEDV**********************
Disordered Region (DISPRO)
*ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISI********SSQPNSSECRSQTMP*Y*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIKEDVDSTVSSQPNSSECRSQTMPVYS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	265	2.2.26 [Sep-21-2011]
Q9SU92	245	Inorganic pyrophosphatase	yes	no	0.913	0.987	0.680	1e-98
Q9FZ62	279	Inorganic pyrophosphatase	no	no	0.905	0.860	0.570	2e-81
Q67YC0	295	Inorganic pyrophosphatase	no	no	0.973	0.874	0.547	7e-81
Q6DBV4	279	Probable phosphatase phos	yes	no	0.833	0.792	0.330	7e-28
Q66KD6	238	Probable phosphatase phos	yes	no	0.822	0.915	0.320	4e-27
Q9D9M5	241	Pyridoxal phosphate phosp	yes	no	0.852	0.937	0.309	2e-26
Q66HC4	241	Pyridoxal phosphate phosp	yes	no	0.852	0.937	0.309	5e-26
Q8R2H9	267	Phosphoethanolamine/phosp	no	no	0.849	0.842	0.297	1e-25
Q8TCT1	267	Phosphoethanolamine/phosp	yes	no	0.833	0.827	0.307	2e-25
O73884	268	Phosphoethanolamine/phosp	yes	no	0.845	0.835	0.296	2e-25

>sp|Q9SU92|PPSP3_ARATH Inorganic pyrophosphatase 3 OS=Arabidopsis thaliana GN=At4g29530 PE=2 SV=1

 Score =  359 bits (922), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 166/244 (68%), Positives = 199/244 (81%), Gaps = 2/244 (0%)

Query: 1   MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
           MA +V++FDFDRTLID DSDNWVVT+MGLT +F+QLR TLPWN LMDRMM EL SQG+++
Sbjct: 1   MAKIVILFDFDRTLIDGDSDNWVVTEMGLTEIFHQLRFTLPWNRLMDRMMMELQSQGRSI 60

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           +DI +CL++ P+DSH+  AIKSA S GCDLKIVSDANQF+IE I+EHH L+ CFSEIYTN
Sbjct: 61  DDIKSCLKKMPIDSHIIEAIKSAKSSGCDLKIVSDANQFFIEKILEHHDLVDCFSEIYTN 120

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGK--QRFIYLGDG 178
           PT +D+ G LRILPYH   L  H CNLCPSNLCKG V+DH+  S    +  +RFIYLGDG
Sbjct: 121 PTSLDDNGNLRILPYHSDALPPHSCNLCPSNLCKGLVMDHLRASSSNDQIPRRFIYLGDG 180

Query: 179 RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAIS 238
            GDFCPTLKLR+CDFVMPR NYPLW +I  NP+LIKA+V EWSSAEE ++ILL L+  I+
Sbjct: 181 GGDFCPTLKLRECDFVMPRTNYPLWKKISDNPLLIKAEVKEWSSAEEQQRILLQLVSTIT 240

Query: 239 IKED 242
            +ED
Sbjct: 241 KEED 244

Catalyzes the specific cleavage of pyrophosphate.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 6EC: .EC: 1EC: .EC: 1

>sp|Q9FZ62|PPSP2_ARATH Inorganic pyrophosphatase 2 OS=Arabidopsis thaliana GN=At1g17710 PE=2 SV=1

 Score =  302 bits (773), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 138/242 (57%), Positives = 181/242 (74%), Gaps = 2/242 (0%)

Query: 3   DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVED 62
           ++V+VFDFD+T+ID DSDNWVV ++G T LFNQL  T+PWNSLM+RMMKELH  GKT+E+
Sbjct: 6   NIVIVFDFDKTIIDVDSDNWVVDELGFTDLFNQLLPTMPWNSLMNRMMKELHDHGKTIEE 65

Query: 63  IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPT 122
           I   LR+ P+   V  AIKSAH+LGC+L+IVSDAN  +IETI+EH G+   FSEI TNP 
Sbjct: 66  IKQVLRRIPIHPRVIPAIKSAHALGCELRIVSDANTLFIETIIEHLGIGEFFSEINTNPG 125

Query: 123 YVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGC-GK-QRFIYLGDGRG 180
            VDEQGRL + PYHD T S HGC+ CP N+CKG ++D +  S    GK  + IYLGDG G
Sbjct: 126 LVDEQGRLIVSPYHDFTKSSHGCSRCPPNMCKGLIIDRIQASLTKEGKTSKMIYLGDGAG 185

Query: 181 DFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIK 240
           D+CP+L L+  D++MPRKN+P+WD I  NPML+KA V +W+  E++++IL+ +I  I   
Sbjct: 186 DYCPSLGLKAEDYMMPRKNFPVWDLISQNPMLVKATVRDWTDGEDMERILMEIINEIMSS 245

Query: 241 ED 242
           E+
Sbjct: 246 EE 247

Catalyzes the specific cleavage of pyrophosphate.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q67YC0|PPSP1_ARATH Inorganic pyrophosphatase 1 OS=Arabidopsis thaliana GN=PS2 PE=1 SV=1

 Score =  300 bits (768), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 144/263 (54%), Positives = 192/263 (73%), Gaps = 5/263 (1%)

Query: 4   VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDI 63
           +VVVFDFD+T+ID DSDNWV+ ++G T LFNQL  T+PWN+LMDRMMKELH QGKT+E+I
Sbjct: 14  IVVVFDFDKTIIDVDSDNWVIDELGFTDLFNQLLPTMPWNTLMDRMMKELHDQGKTIEEI 73

Query: 64  ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTY 123
              LR  P+   V  AIKSAH LGC+L+IVSDAN F+IETI+EH G+   FSEI +NP Y
Sbjct: 74  KQVLRTIPIHPRVVPAIKSAHDLGCELRIVSDANMFFIETIVEHLGISELFSEINSNPGY 133

Query: 124 VDEQGRLRILPYHDSTLSHHGCN--LCPSNLCKGFVLDHVCTSFGC-GKQRFIYLGDGRG 180
           VDE+G L+I PYHD T S H C+   CP N+CKG +++ +  S    GK++ IYLGDG G
Sbjct: 134 VDERGTLKISPYHDFTKSPHSCSCGTCPPNMCKGLIIERIQQSLAKEGKKKMIYLGDGAG 193

Query: 181 DFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIK 240
           D+CP+LKL   D+VMPRKN+P+WD I  NPMLIKA + EW+  + ++ IL+  I  I ++
Sbjct: 194 DYCPSLKLNTEDYVMPRKNFPVWDLISQNPMLIKAAIREWTDGQSMEMILIGTIEEIRLE 253

Query: 241 EDVDSTVSSQPNSSECRSQTMPV 263
           E+ +  ++S  N+  C+ QT+ +
Sbjct: 254 EEKEKMLTSAENN--CKMQTISI 274

Catalyzes the specific cleavage of pyrophosphate.

Arabidopsis thaliana (taxid: 3702)

EC: 3

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: 1

>sp|Q6DBV4|PHOP1_DANRE Probable phosphatase phospho1 OS=Danio rerio GN=phospho1 PE=2 SV=1

 Score =  124 bits (311), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 122/245 (49%), Gaps = 24/245 (9%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVE 61
           ++ FDFD TL+D+ SD+ +V+      L   L+ T     +N  M R++  L  QG T  
Sbjct: 37  LMFFDFDETLVDECSDDSMVSAAPGGVLPGWLKDTYRPGRYNEYMQRVLAYLSEQGVTPA 96

Query: 62  DIANCLRQCPLDSHVAAAIK---SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
            I   + + P    + A +    S  S   ++  VSDAN  +IET ++H G    F  I+
Sbjct: 97  AIRATVEKLPPCPGIPALMHFLLSQPSRDFEVVCVSDANTVFIETWLQHMGFQPLFLRIF 156

Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKG-----FVLDHVCTSFGCGKQRFI 173
           TNP + D+ G L++ P+H      H C  CP+N+CK      +V   +    G   Q+ +
Sbjct: 157 TNPAHFDDNGVLQLRPFHS-----HECLRCPANMCKAVVVRQYVAQRIRERGGRPYQKVL 211

Query: 174 YLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRIC----SNPMLIKAKVHEWSSAEE---- 225
           Y+GDG  DFCP+L L   D   PR+++P+   I     + P   KA V  W S E+    
Sbjct: 212 YMGDGANDFCPSLTLSPGDVAFPRRDFPMHKLIQEMGEAKPGEFKASVVPWKSGEDVVNT 271

Query: 226 LKKIL 230
           L+KIL
Sbjct: 272 LRKIL 276

Probable phosphatase, involved in bone mineralization.

Danio rerio (taxid: 7955)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q66KD6|PHOP2_XENTR Probable phosphatase phospho2 OS=Xenopus tropicalis GN=phospho2 PE=2 SV=1

 Score =  122 bits (305), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 115/240 (47%), Gaps = 22/240 (9%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTL---PWNSLMDRMMKELHSQGKTVE 61
           ++VFDFD T+I+D+SD W+V  +    L N L+++     W   M R+   L  QG   E
Sbjct: 4   LLVFDFDHTIINDNSDTWIVQCVPGKKLPNGLQNSYEKGKWTEYMGRVFSYLGEQGIREE 63

Query: 62  DIANCLRQCPLDSHVAAAIKSAHSLG-----CDLKIVSDANQFYIETIMEHHGLLGCFSE 116
           D+   +   P   +        H +G      D  I+SD+N  +I+ I+ H  +   F +
Sbjct: 64  DMKRIMIAIP---YTPGMTDLLHFIGQNKDSFDCIIISDSNTIFIDWILTHANVHNVFDK 120

Query: 117 IYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC---TSFGCGKQRFI 173
           ++TNP   D  G L +  +H     HH C  CP+NLCK  VL+      +S      + +
Sbjct: 121 VFTNPAAFDSVGNLTVQNFH----VHH-CTTCPTNLCKKKVLEEFVAKQSSNSAHYSKIV 175

Query: 174 YLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHL 233
           Y+GDG  D CP   L+  D  MPR  Y L   I  +  L+ + +  WS+  E   IL HL
Sbjct: 176 YVGDGGNDLCPVTFLKKGDIAMPRAGYTLDKHIAKDVTLVDSTISVWSTGAE---ILSHL 232

Probable phosphatase.

Xenopus tropicalis (taxid: 8364)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: -

>sp|Q9D9M5|PHOP2_MOUSE Pyridoxal phosphate phosphatase PHOSPHO2 OS=Mus musculus GN=Phospho2 PE=2 SV=1

 Score =  119 bits (299), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 112/242 (46%), Gaps = 16/242 (6%)

Query: 4   VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
           V++VFDFD T+IDD+SD W+V       L  +L+ +     W   M R+ K L  +G   
Sbjct: 3   VLLVFDFDNTIIDDNSDTWIVQCAPDKKLPIELQDSYQKGLWTEFMGRVFKYLRDEGVKA 62

Query: 61  EDIANCLRQCPLDSHVAAAIK--SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
           +++   +   P  S +   +     +    D  I+SD+N  +I+ ++E       F  ++
Sbjct: 63  DELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLEAAAFHDVFDHVF 122

Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC---TSFGCGKQRFIYL 175
           TNP   D  GRL +  YH      H C  CP NLCK  VL          G    R +Y+
Sbjct: 123 TNPASFDSSGRLTVKNYH-----AHSCTRCPKNLCKNTVLGEFIDKQLQKGVRYTRIVYI 177

Query: 176 GDGRGDFCPTLKLRDCDFVMPRKNYPL---WDRICSNPMLIKAKVHEWSSAEELKKILLH 232
           GDG  D CP   L+  D  MPR+ Y L     ++  N   +++ +  WSS  E+   L  
Sbjct: 178 GDGGNDVCPVTFLKKNDVAMPREGYTLHRTLAKMSQNLEPMESSIVVWSSGVEIISHLQF 237

Query: 233 LI 234
           LI
Sbjct: 238 LI 239

Phosphatase that has high activity toward pyridoxal 5'-phosphate (PLP). Also active at much lower level toward pyrophosphate, phosphoethanolamine (PEA), phosphocholine (PCho), phospho-l-tyrosine, fructose-6-phosphate, p-nitrophenyl phosphate, and h-glycerophosphate.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 4

>sp|Q66HC4|PHOP2_RAT Pyridoxal phosphate phosphatase PHOSPHO2 OS=Rattus norvegicus GN=Phospho2 PE=2 SV=1

 Score =  118 bits (295), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 111/242 (45%), Gaps = 16/242 (6%)

Query: 4   VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
           V++VFDFD T+IDD+SD W++       L  +L+ +     W   M R+ K L  +G   
Sbjct: 3   VLLVFDFDNTIIDDNSDTWIIQCAPDKKLPIELQDSYQKGLWTEFMGRVFKYLRDEGVKE 62

Query: 61  EDIANCLRQCPLDSHVAAAIK--SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
           E++   +   P  S +   +     +    D  I+SD+N  +I+ ++E       F  ++
Sbjct: 63  EELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLEAAAFHDVFDTVF 122

Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC---TSFGCGKQRFIYL 175
           TNP   D  GRL +   H      H C  CP NLCK  VL          G    R +Y+
Sbjct: 123 TNPASFDSTGRLTVRNCH-----THACTRCPKNLCKNTVLGEFIDKQLQKGVRYTRIVYI 177

Query: 176 GDGRGDFCPTLKLRDCDFVMPRKNYPL---WDRICSNPMLIKAKVHEWSSAEELKKILLH 232
           GDG  D CP   L+  D  MPR+ Y L    D++  N   + + +  WSS  E+   L  
Sbjct: 178 GDGGNDVCPVTFLKKNDVAMPREGYTLHRTLDKMSQNLEPMASSIVVWSSGMEIISHLQF 237

Query: 233 LI 234
           LI
Sbjct: 238 LI 239

Phosphatase that has high activity toward pyridoxal 5'-phosphate (PLP). Also active at much lower level toward pyrophosphate, phosphoethanolamine (PEA), phosphocholine (PCho), phospho-l-tyrosine, fructose-6-phosphate, p-nitrophenyl phosphate, and h-glycerophosphate.

Rattus norvegicus (taxid: 10116)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 4

>sp|Q8R2H9|PHOP1_MOUSE Phosphoethanolamine/phosphocholine phosphatase OS=Mus musculus GN=Phospho1 PE=2 SV=1

 Score =  117 bits (292), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 17/242 (7%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVE 61
           ++ FDFD T++D++SD+ +V       L   LR+T     +N  M R+ K L  QG    
Sbjct: 28  LLTFDFDETIVDENSDDSIVRAAPGQQLPESLRATYREGYYNEYMQRVFKYLGEQGVRPR 87

Query: 62  DIANCLRQCPLDSHVAAAIKSAHSLGC--DLKIVSDANQFYIETIMEHHGLLGCFSEIYT 119
           D+       PL   +   ++     G   ++ ++SDAN F +E+ +   G    F  I +
Sbjct: 88  DLRAVYETIPLSPGMGDLLQFIAKQGSCFEVILISDANTFGVESALRAAGHHSLFRRILS 147

Query: 120 NPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSF---GCGKQRFIYLG 176
           NP+  D +G L + P+H      H C+ CP+N+CK  VL          G   +R  Y+G
Sbjct: 148 NPSGPDARGLLTLRPFHT-----HSCSRCPANMCKHKVLSEYLRERARDGVHFERLFYVG 202

Query: 177 DGRGDFCPTLKLRDCDFVMPRKNYPLWDRIC----SNPMLIKAKVHEWSSAEELKKILLH 232
           DG  DFCP   L   D   PR+ YP+   I     + P   +A V  W +A ++++ L  
Sbjct: 203 DGANDFCPMGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRAHVVPWETAADVRQHLQQ 262

Query: 233 LI 234
           ++
Sbjct: 263 VL 264

Phosphatase that has a high activity toward phosphoethanolamine (PEA) and phosphocholine (PCho). Involved in the generation of inorganic phosphate for bone mineralization.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 5

>sp|Q8TCT1|PHOP1_HUMAN Phosphoethanolamine/phosphocholine phosphatase OS=Homo sapiens GN=PHOSPHO1 PE=1 SV=1

 Score =  116 bits (290), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 115/241 (47%), Gaps = 20/241 (8%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVE 61
           ++ FDFD T++D++SD+ +V       L   LR+T     +N  M R+ K L  QG    
Sbjct: 28  LLTFDFDETIVDENSDDSIVRAAPGQRLPESLRATYREGFYNEYMQRVFKYLGEQGVRPR 87

Query: 62  DIANCLRQCPLDSHVAAAIKSAHSLGC--DLKIVSDANQFYIETIMEHHGLLGCFSEIYT 119
           D++      PL   ++  ++     G   ++ ++SDAN F +E+ +   G    F  I +
Sbjct: 88  DLSAIYEAIPLSPGMSDLLQFVAKQGACFEVILISDANTFGVESSLRAAGHHSLFRRILS 147

Query: 120 NPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSF---GCGKQRFIYLG 176
           NP+  D +G L + P+H      H C  CP+N+CK  VL          G   +R  Y+G
Sbjct: 148 NPSGPDARGLLALRPFHT-----HSCARCPANMCKHKVLSDYLRERAHDGVHFERLFYVG 202

Query: 177 DGRGDFCPTLKLRDCDFVMPRKNYPLWDRIC----SNPMLIKAKVHEWSSAEELKKILLH 232
           DG  DFCP   L   D   PR+ YP+   I     + P   +A V  W +A +++   LH
Sbjct: 203 DGANDFCPMGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRASVVPWETAADVR---LH 259

Query: 233 L 233
           L
Sbjct: 260 L 260

Phosphatase that has a high activity toward phosphoethanolamine (PEA) and phosphocholine (PCho). Involved in the generation of inorganic phosphate for bone mineralization.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 5

>sp|O73884|PHOP1_CHICK Phosphoethanolamine/phosphocholine phosphatase OS=Gallus gallus GN=PHOSPHO1 PE=2 SV=1

 Score =  115 bits (289), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 113/243 (46%), Gaps = 19/243 (7%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVE 61
           ++VFDFD T+I++ SD+ +V       L   +R +     +N  M R++  +  QG  + 
Sbjct: 28  LLVFDFDGTIINESSDDSIVRAAPGQALPEHIRQSFREGFYNEYMQRVLAYMGDQGVKMG 87

Query: 62  DIANCLRQCPLDSHVA---AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
           D        PL   +      +   H L  ++ ++SDAN F IE  +   G    F +I+
Sbjct: 88  DFKAVYENIPLSPGMPDLFQFLSKNHEL-FEIILISDANMFGIECKLRAAGFYSLFRKIF 146

Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGK---QRFIYL 175
           +NP+  D++G   + PYH      H C  CP+N CK  +L          +   +R  Y+
Sbjct: 147 SNPSSFDKRGYFTLGPYHS-----HKCLDCPANTCKRKILTEYLAERAQEEVEFERVFYV 201

Query: 176 GDGRGDFCPTLKLRDCDFVMPRKNYPL----WDRICSNPMLIKAKVHEWSSAEELKKILL 231
           GDG  DFCP++ L   D   PRK YP+     +     P   +A V  W SA E+ + L 
Sbjct: 202 GDGANDFCPSVTLTSADVAFPRKGYPMHQMTQEMEKKQPGTFQATVVPWESATEVARYLQ 261

Query: 232 HLI 234
            L+
Sbjct: 262 ELL 264

Phosphatase that has a high activity toward phosphoethanolamine (PEA) and phosphocholine (PCho). Involved in the generation of inorganic phosphate for bone mineralization.

Gallus gallus (taxid: 9031)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 7

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
255546187	253	Pyridoxal phosphate phosphatase PHOSPHO2	0.950	0.996	0.679	1e-101
15233610	245	Pyridoxal phosphate phosphatase-related	0.913	0.987	0.680	6e-97
297803088	242	2,3-diketo-5-methylthio-1-phosphopentane	0.898	0.983	0.679	2e-95
225444975	267	PREDICTED: inorganic pyrophosphatase 3 [	0.924	0.917	0.650	1e-94
225429472	269	PREDICTED: inorganic pyrophosphatase 2 [	0.950	0.936	0.629	6e-93
225442333	273	PREDICTED: inorganic pyrophosphatase 2 [	0.977	0.948	0.625	2e-91
449447842	273	PREDICTED: inorganic pyrophosphatase 2-l	0.916	0.890	0.620	7e-90
359807590	272	uncharacterized protein LOC100785878 [Gl	0.969	0.944	0.579	7e-90
357520709	238	Pyridoxal phosphate phosphatase PHOSPHO2	0.871	0.970	0.669	1e-89
255637717	272	unknown [Glycine max]	0.969	0.944	0.575	7e-89

>gi|255546187|ref|XP_002514153.1| Pyridoxal phosphate phosphatase PHOSPHO2, putative [Ricinus communis] gi|223546609|gb|EEF48107.1| Pyridoxal phosphate phosphatase PHOSPHO2, putative [Ricinus communis]

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 172/253 (67%), Positives = 209/253 (82%), Gaps = 1/253 (0%)

Query: 1   MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
           MA +VVVFDFDRTLID DSD WVVTQMGL+ LFNQLRSTLPWNSLMDRMM+ELHSQGKTV
Sbjct: 1   MAQIVVVFDFDRTLIDGDSDRWVVTQMGLSSLFNQLRSTLPWNSLMDRMMRELHSQGKTV 60

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           +DI  CL + PL   V AAI+SAH+LGC+L+I+SDANQF+IE I++HHGLLGCFS+I TN
Sbjct: 61  DDITECLSRSPLHPQVIAAIQSAHALGCELRIISDANQFFIEKILDHHGLLGCFSQITTN 120

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFG-CGKQRFIYLGDGR 179
           P+ VD++GR+RI PYH      HGC+LCP NLCKG V++ +C S     K+RFIYLGDG 
Sbjct: 121 PSLVDDEGRVRIFPYHALGTPPHGCHLCPPNLCKGLVINQICASTAEIEKRRFIYLGDGS 180

Query: 180 GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISI 239
           GDFCPTLKLR+ D+VMPR++YPLW+RICSNP L+KA+VH+WSS EEL +ILLHLI  I  
Sbjct: 181 GDFCPTLKLREGDYVMPRRDYPLWNRICSNPTLVKAEVHDWSSGEELGEILLHLINTIFT 240

Query: 240 KEDVDSTVSSQPN 252
            +++ S+ S+Q N
Sbjct: 241 AKNIQSSNSNQLN 253

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15233610|ref|NP_194682.1| Pyridoxal phosphate phosphatase-related protein [Arabidopsis thaliana] gi|75208018|sp|Q9SU92.1|PPSP3_ARATH RecName: Full=Inorganic pyrophosphatase 3; Short=AtPPsPase3; Short=PPi phosphatase 3; Short=Pyrophosphate-specific phosphatase 3 gi|5123547|emb|CAB45313.1| putative protein [Arabidopsis thaliana] gi|7269852|emb|CAB79711.1| putative protein [Arabidopsis thaliana] gi|29824359|gb|AAP04140.1| unknown protein [Arabidopsis thaliana] gi|30793795|gb|AAP40350.1| unknown protein [Arabidopsis thaliana] gi|110738905|dbj|BAF01374.1| hypothetical protein [Arabidopsis thaliana] gi|332660240|gb|AEE85640.1| Pyridoxal phosphate phosphatase-related protein [Arabidopsis thaliana]

 Score =  359 bits (922), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 166/244 (68%), Positives = 199/244 (81%), Gaps = 2/244 (0%)

Query: 1   MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
           MA +V++FDFDRTLID DSDNWVVT+MGLT +F+QLR TLPWN LMDRMM EL SQG+++
Sbjct: 1   MAKIVILFDFDRTLIDGDSDNWVVTEMGLTEIFHQLRFTLPWNRLMDRMMMELQSQGRSI 60

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           +DI +CL++ P+DSH+  AIKSA S GCDLKIVSDANQF+IE I+EHH L+ CFSEIYTN
Sbjct: 61  DDIKSCLKKMPIDSHIIEAIKSAKSSGCDLKIVSDANQFFIEKILEHHDLVDCFSEIYTN 120

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGK--QRFIYLGDG 178
           PT +D+ G LRILPYH   L  H CNLCPSNLCKG V+DH+  S    +  +RFIYLGDG
Sbjct: 121 PTSLDDNGNLRILPYHSDALPPHSCNLCPSNLCKGLVMDHLRASSSNDQIPRRFIYLGDG 180

Query: 179 RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAIS 238
            GDFCPTLKLR+CDFVMPR NYPLW +I  NP+LIKA+V EWSSAEE ++ILL L+  I+
Sbjct: 181 GGDFCPTLKLRECDFVMPRTNYPLWKKISDNPLLIKAEVKEWSSAEEQQRILLQLVSTIT 240

Query: 239 IKED 242
            +ED
Sbjct: 241 KEED 244

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297803088|ref|XP_002869428.1| 2,3-diketo-5-methylthio-1-phosphopentane phosphatase family [Arabidopsis lyrata subsp. lyrata] gi|297315264|gb|EFH45687.1| 2,3-diketo-5-methylthio-1-phosphopentane phosphatase family [Arabidopsis lyrata subsp. lyrata]

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 163/240 (67%), Positives = 193/240 (80%), Gaps = 2/240 (0%)

Query: 1   MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
           M  +V++FDFDRTLID DSD WVVT+MGLT +F+QLR TLPWN LMDRMM E+ SQG+++
Sbjct: 1   MERIVIIFDFDRTLIDGDSDRWVVTEMGLTEIFHQLRFTLPWNRLMDRMMMEIQSQGRSI 60

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           +DI +CL++ P+DSH+  AIKS  SLGCDLKIVSDANQFYIE I+E H LL CFSEIYTN
Sbjct: 61  DDIESCLKKMPIDSHIIEAIKSTKSLGCDLKIVSDANQFYIEKILEQHDLLDCFSEIYTN 120

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGK--QRFIYLGDG 178
           PT +DE G LRILPYH   L  H CNLCPSNLCKG V+DH+  S    +  +RFIYLGDG
Sbjct: 121 PTSLDENGNLRILPYHSDALPPHSCNLCPSNLCKGLVMDHIRASSSNDQIPRRFIYLGDG 180

Query: 179 RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAIS 238
            GDFCPTLKLR+CDFVMPR NYPLW +I  N +LIKA+V EWSSAEEL++ILL L+  I+
Sbjct: 181 GGDFCPTLKLRECDFVMPRTNYPLWKKISDNALLIKAEVKEWSSAEELQRILLQLVSTIT 240

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225444975|ref|XP_002282651.1| PREDICTED: inorganic pyrophosphatase 3 [Vitis vinifera] gi|297738692|emb|CBI27937.3| unnamed protein product [Vitis vinifera]

 Score =  352 bits (903), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 160/246 (65%), Positives = 199/246 (80%), Gaps = 1/246 (0%)

Query: 1   MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
           M  +VV+FDFDRT+ID DSD WVV +MGLT  F QLRS LPWN+LMDRM+ ELHSQG+T+
Sbjct: 1   MTGIVVLFDFDRTIIDGDSDKWVVVEMGLTQSFQQLRSILPWNTLMDRMLHELHSQGRTI 60

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           E+I  CL++ P++  +AAAIK+AH  GCDLK+VSDAN FYIETI++HHGLLG FSEIYTN
Sbjct: 61  EEIEKCLKRVPMNPRIAAAIKAAHDFGCDLKVVSDANNFYIETILKHHGLLGFFSEIYTN 120

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHV-CTSFGCGKQRFIYLGDGR 179
           PT VDE GRLRI PY D TL+ HGC+LC  N+CKG V++ +   +   GK+RFIY+GDG+
Sbjct: 121 PTSVDEVGRLRIFPYRDFTLAPHGCSLCSYNMCKGLVIEQIRAAASENGKKRFIYVGDGK 180

Query: 180 GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISI 239
           GDFCP+LKL   D+VMPRKNYPLW+ IC +PM IKA+V EWS  EEL+K+LLHLI  ISI
Sbjct: 181 GDFCPSLKLGHGDYVMPRKNYPLWNLICGDPMHIKAQVLEWSDGEELEKVLLHLIDTISI 240

Query: 240 KEDVDS 245
           +E++ +
Sbjct: 241 EENISN 246

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429472|ref|XP_002277629.1| PREDICTED: inorganic pyrophosphatase 2 [Vitis vinifera] gi|296081623|emb|CBI20628.3| unnamed protein product [Vitis vinifera]

 Score =  346 bits (888), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 163/259 (62%), Positives = 204/259 (78%), Gaps = 7/259 (2%)

Query: 4   VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDI 63
           VVVVFDFD+T+ID DSDNWVV ++GLT LF QL  T+PWNSLMDRM  ELHSQGKT+E+I
Sbjct: 3   VVVVFDFDKTIIDCDSDNWVVDELGLTPLFTQLLPTMPWNSLMDRMFMELHSQGKTMEEI 62

Query: 64  ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTY 123
           A CL++ PL   + +AIKSAH+ GCDL+IVSDAN F+IET+++HHGL+ CFSEI TNP++
Sbjct: 63  AECLKRAPLHPRIISAIKSAHASGCDLRIVSDANAFFIETVLKHHGLMDCFSEIKTNPSF 122

Query: 124 VDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGC-GKQRFIYLGDGRGDF 182
           VD +GRLRILPYHD   S HGCN CP N+CKG V++ V TS    GK+RFIYLGDG  DF
Sbjct: 123 VDGEGRLRILPYHDLKSSSHGCNFCPPNMCKGLVMERVRTSVSAEGKKRFIYLGDGSADF 182

Query: 183 CPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIKED 242
           C  LKL + D++MPRKNYP+W+ ICSNP LIK+K++EWS+ EEL+KILLHLI  ISI+E 
Sbjct: 183 CSGLKLGEGDYLMPRKNYPIWEIICSNPKLIKSKINEWSNGEELEKILLHLITTISIEEK 242

Query: 243 VDSTVSSQPNSSECRSQTM 261
            +        S +C++ +M
Sbjct: 243 CNM------RSDKCQASSM 255

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225442333|ref|XP_002280889.1| PREDICTED: inorganic pyrophosphatase 2 [Vitis vinifera] gi|297743107|emb|CBI35974.3| unnamed protein product [Vitis vinifera]

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 164/262 (62%), Positives = 204/262 (77%), Gaps = 3/262 (1%)

Query: 1   MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
           MA +VVVFDFD+T+ID DSDNWVV ++G T LFNQL  T+PWNSLMDRMMKELHSQGKT+
Sbjct: 1   MAGIVVVFDFDKTIIDVDSDNWVVDELGATDLFNQLLPTMPWNSLMDRMMKELHSQGKTI 60

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           +DIA  L++ P+   V  AIKSAH+LGCDLKIVSDAN F+IETI++H G++ CFSEI TN
Sbjct: 61  DDIAEVLKRIPIHPRVVPAIKSAHALGCDLKIVSDANLFFIETILKHLGVMDCFSEINTN 120

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRG 180
           P++VDE+GRLRI P+HD T S HGC+LCP N+CKG V+  +  S     ++FIYLGDG G
Sbjct: 121 PSFVDEEGRLRIFPHHDFTSSSHGCSLCPPNMCKGMVIKRIQASIST--EKFIYLGDGSG 178

Query: 181 DFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAI-SI 239
           DFCP+LKL D D+VMPRKN+PLWD IC NP LIKA+VHEWS  EEL+  LLHLI  I   
Sbjct: 179 DFCPSLKLGDGDYVMPRKNFPLWDLICRNPNLIKAEVHEWSDGEELEHGLLHLIKKISEE 238

Query: 240 KEDVDSTVSSQPNSSECRSQTM 261
               +++ ++Q  S +C+ +TM
Sbjct: 239 NNANNNSAAAQLISVDCKFETM 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447842|ref|XP_004141676.1| PREDICTED: inorganic pyrophosphatase 2-like [Cucumis sativus] gi|449480589|ref|XP_004155938.1| PREDICTED: inorganic pyrophosphatase 2-like [Cucumis sativus]

 Score =  336 bits (861), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 152/245 (62%), Positives = 192/245 (78%), Gaps = 2/245 (0%)

Query: 1   MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
           MA +VVVFDFD+T+ID DSDNWVV ++G T LFNQL  T+PWNSLMDRMM ELH+QGKT+
Sbjct: 1   MAGIVVVFDFDKTIIDLDSDNWVVDELGATDLFNQLLPTMPWNSLMDRMMTELHAQGKTI 60

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           +DI   L++ P+   V  AI++AH+LGCDL+IVSDAN F+IETI++H G+  CFSEI TN
Sbjct: 61  DDIVEVLKRAPIHPDVVPAIRAAHALGCDLRIVSDANMFFIETILDHLGIRECFSEINTN 120

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGC--GKQRFIYLGDG 178
           P YVDE+GRLRI P HD   S HGCNLCP N+CKG V++ +  S      K++FIYLGDG
Sbjct: 121 PGYVDEEGRLRIFPIHDFQKSSHGCNLCPPNMCKGLVMERIQASLMSEGKKKKFIYLGDG 180

Query: 179 RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAIS 238
            GD+CP+LKL + DF+MPRKN+PLWD I  NP++IKA++HEWS  EEL +ILL+LI  IS
Sbjct: 181 SGDYCPSLKLGEGDFLMPRKNFPLWDLISQNPLVIKAEIHEWSDGEELARILLNLIKTIS 240

Query: 239 IKEDV 243
           + E+ 
Sbjct: 241 MAENA 245

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359807590|ref|NP_001241414.1| uncharacterized protein LOC100785878 [Glycine max] gi|255641141|gb|ACU20848.1| unknown [Glycine max]

 Score =  336 bits (861), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 153/264 (57%), Positives = 204/264 (77%), Gaps = 7/264 (2%)

Query: 1   MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
           M+  V+VFDFD+T++D DSDNWV+ ++G T LFNQL  T+PWNSLMDRMM ELHS GKT+
Sbjct: 1   MSGTVIVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNSLMDRMMMELHSNGKTI 60

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           EDI   LR+ PL   V  A+++AH+LGCDL+IVSDAN F+IETI++H G+   FSEI TN
Sbjct: 61  EDIEEVLRRIPLHPRVIPALQAAHALGCDLRIVSDANVFFIETILKHLGIREYFSEINTN 120

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFG-CGKQRFIYLGDGR 179
           P YV+E+GRLRILPYHD   + HGC LCP N+CKG ++D +  S    GK+R IYLGDG 
Sbjct: 121 PGYVNEEGRLRILPYHDFNKASHGCTLCPPNMCKGLIIDRIQDSISEEGKKRMIYLGDGS 180

Query: 180 GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISI 239
           GD+CP+L+L++ DF+MPRKN+P+WD IC +P+L+KA++H WS  EEL+++LLHLI  IS+
Sbjct: 181 GDYCPSLRLKERDFMMPRKNFPVWDLICKDPLLVKAEIHGWSDGEELEQVLLHLINKISM 240

Query: 240 KEDVDSTVSSQPNSSECRSQTMPV 263
           +E+      +Q  SS+C+ QT+ V
Sbjct: 241 EEN------AQFISSDCKLQTLSV 258

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357520709|ref|XP_003630643.1| Pyridoxal phosphate phosphatase PHOSPHO2 [Medicago truncatula] gi|355524665|gb|AET05119.1| Pyridoxal phosphate phosphatase PHOSPHO2 [Medicago truncatula]

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 156/233 (66%), Positives = 191/233 (81%), Gaps = 2/233 (0%)

Query: 4   VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP-WNSLMDRMMKELHSQGKTVED 62
           V+VV DFDRT+IDDDSD WV+ QMGL+ LFNQLR+T+P W SLMDRMM+ELHS+G T + 
Sbjct: 2   VIVVLDFDRTIIDDDSDRWVINQMGLSDLFNQLRATMPSWTSLMDRMMEELHSKGITTDK 61

Query: 63  IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPT 122
           IANCL+   L  ++ +AIKSAHSLGCDL+I+SDAN FYI+TI+EHH +LGCFS+I TNPT
Sbjct: 62  IANCLKTAFLSPNIVSAIKSAHSLGCDLRIISDANLFYIQTILEHHNILGCFSQINTNPT 121

Query: 123 YVDEQGRLRILPYHDS-TLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGD 181
           +VDE+GRL I P+HDS TL  H C LCPSN+CKG V+D +  S    K RFIY+GDG GD
Sbjct: 122 FVDEKGRLCITPFHDSKTLPPHDCQLCPSNMCKGLVIDRIRGSLPESKTRFIYVGDGAGD 181

Query: 182 FCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLI 234
           +CPTLKL   DFVMPRKNYPLW+RICS+P L+ AKVH+WS+ EEL+ ILL+L+
Sbjct: 182 YCPTLKLEGGDFVMPRKNYPLWNRICSDPKLVHAKVHDWSNGEELESILLNLV 234

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637717|gb|ACU19181.1| unknown [Glycine max]

 Score =  332 bits (852), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 152/264 (57%), Positives = 203/264 (76%), Gaps = 7/264 (2%)

Query: 1   MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
           M+  V+VFDFD+T++D DSDNWV+ ++G T LFNQL  T+PWNSLMDRMM ELHS GKT+
Sbjct: 1   MSGTVIVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNSLMDRMMMELHSNGKTI 60

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           EDI   LR+ PL   V  A+++AH+LGCDL+IVSDAN F+IETI++H G+   FSEI TN
Sbjct: 61  EDIEEVLRRIPLHPRVIPALQAAHALGCDLRIVSDANVFFIETILKHLGIREYFSEINTN 120

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFG-CGKQRFIYLGDGR 179
           P YV+E+GRLRILPYHD   + HGC LCP N+CKG ++D +  S    GK+R IYLGDG 
Sbjct: 121 PGYVNEEGRLRILPYHDFNKASHGCTLCPPNMCKGLIIDRIQDSISEEGKKRMIYLGDGS 180

Query: 180 GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISI 239
           GD+CP+L+L++ DF+M RKN+P+WD IC +P+L+KA++H WS  EEL+++LLHLI  IS+
Sbjct: 181 GDYCPSLRLKERDFMMSRKNFPVWDLICKDPLLVKAEIHGWSDGEELEQVLLHLINKISM 240

Query: 240 KEDVDSTVSSQPNSSECRSQTMPV 263
           +E+      +Q  SS+C+ QT+ V
Sbjct: 241 EEN------AQFISSDCKLQTLSV 258

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	265
TAIR|locus:2134353	245	AT4G29530 "AT4G29530" [Arabido	0.913	0.987	0.680	5e-92
TAIR|locus:2032748	295	PS2 "phosphate starvation-indu	0.977	0.877	0.545	1.4e-78
TAIR|locus:2007958	279	PEPC1 "phosphoethanolamine/pho	0.958	0.910	0.544	8.1e-76
UNIPROTKB|Q2KI06	241	PHOSPHO2 "Pyridoxal phosphate	0.845	0.929	0.315	3.9e-28
UNIPROTKB|F1PVK9	241	PHOSPHO2 "Uncharacterized prot	0.852	0.937	0.314	3.5e-27
UNIPROTKB|F1S1V3	241	PHOSPHO2 "Uncharacterized prot	0.845	0.929	0.315	3.5e-27
MGI|MGI:1920623	241	Phospho2 "phosphatase, orphan	0.852	0.937	0.309	9.4e-27
ZFIN|ZDB-GENE-040801-198	279	phospho1 "phosphatase, orphan	0.833	0.792	0.338	1.2e-26
RGD|1359274	241	Phospho2 "phosphatase, orphan	0.852	0.937	0.309	2.5e-26
UNIPROTKB|E1BCN8	267	PHOSPHO1 "Uncharacterized prot	0.833	0.827	0.319	8.4e-26

TAIR|locus:2134353 AT4G29530 "AT4G29530" [Arabidopsis thaliana (taxid:3702)]

 Score = 917 (327.9 bits), Expect = 5.0e-92, P = 5.0e-92
 Identities = 166/244 (68%), Positives = 199/244 (81%)

Query:     1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
             MA +V++FDFDRTLID DSDNWVVT+MGLT +F+QLR TLPWN LMDRMM EL SQG+++
Sbjct:     1 MAKIVILFDFDRTLIDGDSDNWVVTEMGLTEIFHQLRFTLPWNRLMDRMMMELQSQGRSI 60

Query:    61 EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
             +DI +CL++ P+DSH+  AIKSA S GCDLKIVSDANQF+IE I+EHH L+ CFSEIYTN
Sbjct:    61 DDIKSCLKKMPIDSHIIEAIKSAKSSGCDLKIVSDANQFFIEKILEHHDLVDCFSEIYTN 120

Query:   121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGK--QRFIYLGDG 178
             PT +D+ G LRILPYH   L  H CNLCPSNLCKG V+DH+  S    +  +RFIYLGDG
Sbjct:   121 PTSLDDNGNLRILPYHSDALPPHSCNLCPSNLCKGLVMDHLRASSSNDQIPRRFIYLGDG 180

Query:   179 RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAIS 238
              GDFCPTLKLR+CDFVMPR NYPLW +I  NP+LIKA+V EWSSAEE ++ILL L+  I+
Sbjct:   181 GGDFCPTLKLRECDFVMPRTNYPLWKKISDNPLLIKAEVKEWSSAEEQQRILLQLVSTIT 240

Query:   239 IKED 242
              +ED
Sbjct:   241 KEED 244

GO:0003824 "catalytic activity" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

TAIR|locus:2032748 PS2 "phosphate starvation-induced gene 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 144/264 (54%), Positives = 193/264 (73%)

Query:     3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVED 62
             ++VVVFDFD+T+ID DSDNWV+ ++G T LFNQL  T+PWN+LMDRMMKELH QGKT+E+
Sbjct:    13 NIVVVFDFDKTIIDVDSDNWVIDELGFTDLFNQLLPTMPWNTLMDRMMKELHDQGKTIEE 72

Query:    63 IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPT 122
             I   LR  P+   V  AIKSAH LGC+L+IVSDAN F+IETI+EH G+   FSEI +NP 
Sbjct:    73 IKQVLRTIPIHPRVVPAIKSAHDLGCELRIVSDANMFFIETIVEHLGISELFSEINSNPG 132

Query:   123 YVDEQGRLRILPYHDSTLSHHGCNL--CPSNLCKGFVLDHVCTSFGC-GKQRFIYLGDGR 179
             YVDE+G L+I PYHD T S H C+   CP N+CKG +++ +  S    GK++ IYLGDG 
Sbjct:   133 YVDERGTLKISPYHDFTKSPHSCSCGTCPPNMCKGLIIERIQQSLAKEGKKKMIYLGDGA 192

Query:   180 GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISI 239
             GD+CP+LKL   D+VMPRKN+P+WD I  NPMLIKA + EW+  + ++ IL+  I  I +
Sbjct:   193 GDYCPSLKLNTEDYVMPRKNFPVWDLISQNPMLIKAAIREWTDGQSMEMILIGTIEEIRL 252

Query:   240 KEDVDSTVSSQPNSSECRSQTMPV 263
             +E+ +  ++S  N+  C+ QT+ +
Sbjct:   253 EEEKEKMLTSAENN--CKMQTISI 274

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0004427 "inorganic diphosphatase activity" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=IEP;RCA

GO:0016462 "pyrophosphatase activity" evidence=IDA

GO:0051262 "protein tetramerization" evidence=IDA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

TAIR|locus:2007958 PEPC1 "phosphoethanolamine/phosphocholine phosphatase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
 Identities = 140/257 (54%), Positives = 186/257 (72%)

Query:     3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVED 62
             ++V+VFDFD+T+ID DSDNWVV ++G T LFNQL  T+PWNSLM+RMMKELH  GKT+E+
Sbjct:     6 NIVIVFDFDKTIIDVDSDNWVVDELGFTDLFNQLLPTMPWNSLMNRMMKELHDHGKTIEE 65

Query:    63 IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPT 122
             I   LR+ P+   V  AIKSAH+LGC+L+IVSDAN  +IETI+EH G+   FSEI TNP 
Sbjct:    66 IKQVLRRIPIHPRVIPAIKSAHALGCELRIVSDANTLFIETIIEHLGIGEFFSEINTNPG 125

Query:   123 YVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGC-GK-QRFIYLGDGRG 180
              VDEQGRL + PYHD T S HGC+ CP N+CKG ++D +  S    GK  + IYLGDG G
Sbjct:   126 LVDEQGRLIVSPYHDFTKSSHGCSRCPPNMCKGLIIDRIQASLTKEGKTSKMIYLGDGAG 185

Query:   181 DFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAISIK 240
             D+CP+L L+  D++MPRKN+P+WD I  NPML+KA V +W+  E++++IL+ +I  I   
Sbjct:   186 DYCPSLGLKAEDYMMPRKNFPVWDLISQNPMLVKATVRDWTDGEDMERILMEIINEIMSS 245

Query:   241 EDVDSTVSSQPNSSECR 257
             E+ +       +S  C+
Sbjct:   246 EEGEEN-DKMLSSENCK 261

GO:0005634 "nucleus" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0052731 "phosphocholine phosphatase activity" evidence=IDA

GO:0052732 "phosphoethanolamine phosphatase activity" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA

UNIPROTKB|Q2KI06 PHOSPHO2 "Pyridoxal phosphate phosphatase PHOSPHO2" [Bos taurus (taxid:9913)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 77/244 (31%), Positives = 116/244 (47%)

Query:     4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
             +++VFDFD T+IDD+SD W+V       L  +L+ +     W   M R+ K L  +G   
Sbjct:     3 ILLVFDFDNTIIDDNSDTWIVQCAPEKKLPLELKDSYKKGFWTEFMGRVFKYLGDEGVRE 62

Query:    61 EDIANCLRQCPLDSHVAAAI----KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE 116
             +++   +   P    +   +    K+ +   C   I+SD+N  +I+ ++E       F +
Sbjct:    63 DEMKRAMISMPFTPGMVELLNFIRKNKNKFDCI--IISDSNSVFIDWVLEATNFHDVFDK 120

Query:   117 IYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL-DHVCTSF--GCGKQRFI 173
             ++TNP   D  G L +  +H      H C  CP NLCK  VL + V      G    R +
Sbjct:   121 VFTNPAAFDSNGHLTVEKHHT-----HSCTRCPQNLCKNVVLVEFVGEQLQQGVNYTRIV 175

Query:   174 YLGDGRGDFCPTLKLRDCDFVMPRKNYPLWD---RICSNPMLIKAKVHEWSSAEELKKIL 230
             Y+GDG  D CP   L+  D  MPRK Y L     R+C N   +++ V  WSS  E+   L
Sbjct:   176 YIGDGGNDVCPVTFLKKNDIAMPRKGYALQKTLYRMCQNLEPMESSVVSWSSGVEIISYL 235

Query:   231 LHLI 234
               LI
Sbjct:   236 QFLI 239

GO:0033883 "pyridoxal phosphatase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1PVK9 PHOSPHO2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 76/242 (31%), Positives = 115/242 (47%)

Query:     4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
             +++VFDFD T+IDD+SD W++       L  +L+++     W   M R+ K L  +G   
Sbjct:     3 ILLVFDFDNTIIDDNSDTWIIQCAPEKKLPIELQNSYKKGFWTEFMGRVFKYLGDRGVRE 62

Query:    61 EDIANCLRQCPLDSHVAAAIK--SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
             +++   +   P    +   +     +    D  I+SD+N  +I+ ++E       F +++
Sbjct:    63 DEMKRAVTSMPFTLGMVELLNFIRRNKDKFDCIIISDSNSVFIDWVLEATSFHDVFDKVF 122

Query:   119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL-DHVCTSF--GCGKQRFIYL 175
             TNP   D  G L +  YH      H CN CP NLCK  VL + V      G    R +Y+
Sbjct:   123 TNPAAFDSNGHLTVENYHA-----HSCNRCPKNLCKNVVLVEFVDKQLQQGIDYTRIVYI 177

Query:   176 GDGRGDFCPTLKLRDCDFVMPRKNYPLW---DRICSNPMLIKAKVHEWSSAEELKKILLH 232
             GDG  D CP   L+  D  MPRK Y L     R+  N   +++ V  WSS  E+   L  
Sbjct:   178 GDGGNDVCPVTFLKKNDVAMPRKGYTLQKTLSRMSQNLEPMESSVIVWSSGVEIISYLQF 237

Query:   233 LI 234
             LI
Sbjct:   238 LI 239

GO:0016791 "phosphatase activity" evidence=IEA

UNIPROTKB|F1S1V3 PHOSPHO2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 77/244 (31%), Positives = 114/244 (46%)

Query:     4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
             +++VFDFD T+IDD+SD W++       L  +LR +     W   M R+ K L  +G   
Sbjct:     3 ILLVFDFDNTIIDDNSDTWIIQCAPEKKLPIELRDSYKKGFWTEFMGRVFKYLGDEGVRE 62

Query:    61 EDIANCLRQCPLDSHVAAAI----KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE 116
             +++   +   P    +   +    K+     C   I+SD+N  +IE ++E       F E
Sbjct:    63 DEMKRAMMSMPFTPGMLELLNFIRKNKDKFDCI--IISDSNSVFIEWVLEATSFYDVFDE 120

Query:   117 IYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL-DHVCTSF--GCGKQRFI 173
             ++TNP   +  G L +  YH      H C+ CP NLCK  VL + V      G      +
Sbjct:   121 VFTNPAAFNSSGHLTVENYHA-----HSCSRCPQNLCKNVVLVEFVGKQLKQGVNYAHIV 175

Query:   174 YLGDGRGDFCPTLKLRDCDFVMPRKNYPLW---DRICSNPMLIKAKVHEWSSAEELKKIL 230
             Y+GDG  D CP   L+  D  MPRK Y L     R+  N   +++ V  WSS  E+   L
Sbjct:   176 YIGDGGNDVCPVTFLKKNDVAMPRKGYTLQKTLSRMSQNLEPMESSVVSWSSGIEIISHL 235

Query:   231 LHLI 234
               LI
Sbjct:   236 QFLI 239

GO:0016791 "phosphatase activity" evidence=IEA

MGI|MGI:1920623 Phospho2 "phosphatase, orphan 2" [Mus musculus (taxid:10090)]

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 75/242 (30%), Positives = 112/242 (46%)

Query:     4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
             V++VFDFD T+IDD+SD W+V       L  +L+ +     W   M R+ K L  +G   
Sbjct:     3 VLLVFDFDNTIIDDNSDTWIVQCAPDKKLPIELQDSYQKGLWTEFMGRVFKYLRDEGVKA 62

Query:    61 EDIANCLRQCPLDSHVAAAIK--SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
             +++   +   P  S +   +     +    D  I+SD+N  +I+ ++E       F  ++
Sbjct:    63 DELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLEAAAFHDVFDHVF 122

Query:   119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSF---GCGKQRFIYL 175
             TNP   D  GRL +  YH      H C  CP NLCK  VL          G    R +Y+
Sbjct:   123 TNPASFDSSGRLTVKNYHA-----HSCTRCPKNLCKNTVLGEFIDKQLQKGVRYTRIVYI 177

Query:   176 GDGRGDFCPTLKLRDCDFVMPRKNYPLWD---RICSNPMLIKAKVHEWSSAEELKKILLH 232
             GDG  D CP   L+  D  MPR+ Y L     ++  N   +++ +  WSS  E+   L  
Sbjct:   178 GDGGNDVCPVTFLKKNDVAMPREGYTLHRTLAKMSQNLEPMESSIVVWSSGVEIISHLQF 237

Query:   233 LI 234
             LI
Sbjct:   238 LI 239

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

GO:0033883 "pyridoxal phosphatase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-040801-198 phospho1 "phosphatase, orphan 1" [Danio rerio (taxid:7955)]

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 83/245 (33%), Positives = 123/245 (50%)

Query:     5 VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTL-P--WNSLMDRMMKELHSQGKT-- 59
             ++ FDFD TL+D+ SD+ +V+      L   L+ T  P  +N  M R++  L  QG T  
Sbjct:    37 LMFFDFDETLVDECSDDSMVSAAPGGVLPGWLKDTYRPGRYNEYMQRVLAYLSEQGVTPA 96

Query:    60 -VEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
              +      L  CP    +   + S  S   ++  VSDAN  +IET ++H G    F  I+
Sbjct:    97 AIRATVEKLPPCPGIPALMHFLLSQPSRDFEVVCVSDANTVFIETWLQHMGFQPLFLRIF 156

Query:   119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL-DHVCTSF----GCGKQRFI 173
             TNP + D+ G L++ P+H      H C  CP+N+CK  V+  +V        G   Q+ +
Sbjct:   157 TNPAHFDDNGVLQLRPFHS-----HECLRCPANMCKAVVVRQYVAQRIRERGGRPYQKVL 211

Query:   174 YLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRIC----SNPMLIKAKVHEWSSAEE---- 225
             Y+GDG  DFCP+L L   D   PR+++P+   I     + P   KA V  W S E+    
Sbjct:   212 YMGDGANDFCPSLTLSPGDVAFPRRDFPMHKLIQEMGEAKPGEFKASVVPWKSGEDVVNT 271

Query:   226 LKKIL 230
             L+KIL
Sbjct:   272 LRKIL 276

GO:0016791 "phosphatase activity" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016787 "hydrolase activity" evidence=IEA

GO:0030500 "regulation of bone mineralization" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1359274 Phospho2 "phosphatase, orphan 2" [Rattus norvegicus (taxid:10116)]

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 75/242 (30%), Positives = 111/242 (45%)

Query:     4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
             V++VFDFD T+IDD+SD W++       L  +L+ +     W   M R+ K L  +G   
Sbjct:     3 VLLVFDFDNTIIDDNSDTWIIQCAPDKKLPIELQDSYQKGLWTEFMGRVFKYLRDEGVKE 62

Query:    61 EDIANCLRQCPLDSHVAAAIK--SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
             E++   +   P  S +   +     +    D  I+SD+N  +I+ ++E       F  ++
Sbjct:    63 EELKRAVTSLPFTSGMIELLSFLRMNKDRFDCIIISDSNSIFIDWVLEAAAFHDVFDTVF 122

Query:   119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSF---GCGKQRFIYL 175
             TNP   D  GRL +   H      H C  CP NLCK  VL          G    R +Y+
Sbjct:   123 TNPASFDSTGRLTVRNCHT-----HACTRCPKNLCKNTVLGEFIDKQLQKGVRYTRIVYI 177

Query:   176 GDGRGDFCPTLKLRDCDFVMPRKNYPLW---DRICSNPMLIKAKVHEWSSAEELKKILLH 232
             GDG  D CP   L+  D  MPR+ Y L    D++  N   + + +  WSS  E+   L  
Sbjct:   178 GDGGNDVCPVTFLKKNDVAMPREGYTLHRTLDKMSQNLEPMASSIVVWSSGMEIISHLQF 237

Query:   233 LI 234
             LI
Sbjct:   238 LI 239

GO:0033883 "pyridoxal phosphatase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E1BCN8 PHOSPHO1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 77/241 (31%), Positives = 119/241 (49%)

Query:     5 VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVE 61
             ++ FDFD T++D++SD+ +V       L   LR+T     +N  M R+ + L  QG    
Sbjct:    28 LLTFDFDETIVDENSDDSIVRAAPGQRLPESLRATYREGFYNEYMQRVFQYLGDQGVRPR 87

Query:    62 DIANCLRQCPLDSHVAAAIKSAHSLG-C-DLKIVSDANQFYIETIMEHHGLLGCFSEIYT 119
             D+       PL   +   ++     G C ++ ++SDAN F +E+ +   G  G F  I++
Sbjct:    88 DLRAVYESIPLSPGMGELLQFVAKQGSCFEVILISDANTFGVESALRAAGHQGLFRRIFS 147

Query:   120 NPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL-DHVCTSF--GCGKQRFIYLG 176
             NP+  D +G L + P+H      H C  CP+N+CK  VL D++      G   +R  Y+G
Sbjct:   148 NPSGPDARGLLALRPFHS-----HSCARCPANMCKHKVLSDYLRERAHDGVHFERLFYVG 202

Query:   177 DGRGDFCPTLKLRDCDFVMPRKNYPLWDRIC----SNPMLIKAKVHEWSSAEELKKILLH 232
             DG  DFCP   L   D   PR+ YP+   I     + P   +A V  W +A E++   LH
Sbjct:   203 DGANDFCPVGLLAGGDVAFPRRGYPMHRLIQEAQKAEPSSFRASVVPWENAIEVR---LH 259

Query:   233 L 233
             L
Sbjct:   260 L 260

GO:0035630 "bone mineralization involved in bone maturation" evidence=IEA

GO:0001958 "endochondral ossification" evidence=IEA

GO:0016791 "phosphatase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9D9M5	PHOP2_MOUSE	3, ., 1, ., 3, ., 7, 4	0.3099	0.8528	0.9377	yes	no
Q66HC4	PHOP2_RAT	3, ., 1, ., 3, ., 7, 4	0.3099	0.8528	0.9377	yes	no
Q8TCT1	PHOP1_HUMAN	3, ., 1, ., 3, ., 7, 5	0.3070	0.8339	0.8277	yes	no
Q9SU92	PPSP3_ARATH	3, ., 6, ., 1, ., 1	0.6803	0.9132	0.9877	yes	no
Q66KD6	PHOP2_XENTR	3, ., 1, ., 3, ., -	0.3208	0.8226	0.9159	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.1.3	LOW CONFIDENCE prediction!
3rd Layer	3.1.3.75	LOW CONFIDENCE prediction!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	265
pfam06888	234	pfam06888, Put_Phosphatase, Putative Phosphatase	1e-117
TIGR01489	188	TIGR01489, DKMTPPase-SF, 2,3-diketo-5-methylthio-1	7e-59
TIGR01488	177	TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superf	4e-28
COG0546	220	COG0546, Gph, Predicted phosphatases [General func	6e-05
pfam13419	176	pfam13419, HAD_2, Haloacid dehalogenase-like hydro	6e-05
COG0560	212	COG0560, SerB, Phosphoserine phosphatase [Amino ac	1e-04
COG1011	229	COG1011, COG1011, Predicted hydrolase (HAD superfa	0.002
pfam00702	187	pfam00702, Hydrolase, haloacid dehalogenase-like h	0.003

>gnl|CDD|219218 pfam06888, Put_Phosphatase, Putative Phosphatase

 Score =  335 bits (862), Expect = e-117
 Identities = 135/239 (56%), Positives = 165/239 (69%), Gaps = 13/239 (5%)

Query: 4   VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTV 60
           ++VVFDFD+T+ID DSDNWVV ++  T LF QLR T+P   WN LMDR+MKELH QG ++
Sbjct: 1   ILVVFDFDKTIIDVDSDNWVVDELPTTQLFEQLRPTMPKGFWNELMDRVMKELHDQGVSI 60

Query: 61  EDIANCLRQCPLDSHVAAAIKSA--HSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
            DI   LR  PL   +   IK    + LGCDL I+SDAN F+IETI+   GL   FSEI+
Sbjct: 61  ADIKAVLRSIPLVPGMVRLIKFLAKNGLGCDLIIISDANSFFIETILRAAGLHDLFSEIF 120

Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDH-VCTSFGCGK--QRFIYL 175
           TNP  VD +GRL +LPYHD     H CNLCPSN+CKG VLD  V +    G   +R IY+
Sbjct: 121 TNPASVDARGRLTVLPYHD-----HSCNLCPSNMCKGKVLDEIVASQAREGVRYERVIYV 175

Query: 176 GDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLI 234
           GDG  DFCP+L+LR+CD  MPRK +PLW  I  NP+L+KA V EWSS  EL++ILL LI
Sbjct: 176 GDGANDFCPSLRLRECDVAMPRKGFPLWKLISENPLLLKASVVEWSSGAELEEILLQLI 234

This family contains a number of putative eukaryotic acid phosphatases. Some family members represent the products of the PSI14 phosphatase family in Lycopersicon esculentum (Tomato). Length = 234

>gnl|CDD|213629 TIGR01489, DKMTPPase-SF, 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

 Score =  184 bits (470), Expect = 7e-59
 Identities = 67/198 (33%), Positives = 90/198 (45%), Gaps = 14/198 (7%)

Query: 4   VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTL---PWNSLMDRMMKELHSQGKTV 60
           VVVV DFD T+  +DSD+W+  + G       L   L        MDR MK L   G   
Sbjct: 2   VVVVSDFDGTITLNDSDDWITDKFGPPEANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKE 61

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           ++I   L+  P+D      I      G D  ++SD N F+I+ ++E  G    F EIY+N
Sbjct: 62  DEILEVLKSAPIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSN 121

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRG 180
           P   D  GR  + P+H      HGC  CP   CKG V+  +        Q  IY+GDG  
Sbjct: 122 PASFDNDGRHIVWPHHC-----HGCCSCPCGCCKGKVIHKLSEP---KYQHIIYIGDGVT 173

Query: 181 DFCPTLKLRDCDFVMPRK 198
           D CP       D V  ++
Sbjct: 174 DVCPAKLS---DVVFAKE 188

This phosphatase is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. With the exception of OMNI|NTL01BS01361 from B. subtilis and GP|15024582 from Clostridium acetabutylicum, the members of this group are all eukaryotic, spanning metazoa, plants and fungi. The B. subtilus gene (YkrX, renamed MtnX) is part of an operon for the conversion of methylthioribose (MTR) to methionine. It works with the enolase MtnW, a RuBisCO homolog. The combination of MtnW and MtnX achieves the same overall reaction as the enolase-phosphatase MtnC. The function of MtnX was shown by Ashida, et al. (2003) to be 2,3-diketo-5-methylthio-1-phosphopentane phosphatase, rather than 2,3-diketo-5-methylthio-1-phosphopentane phosphatase as proposed earlier. See the Genome Property for methionine salvage for more details. In eukaryotes, methionine salvage from methylthioadenosine also occurs. It seems reasonable that members of this family in eukaryotes fulfill a similar role as in Bacillus. A more specific, equivalog-level model is TIGR03333. Note that a member of this family from S. cerevisiae is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact [Central intermediary metabolism, Other]. Length = 188

>gnl|CDD|233435 TIGR01488, HAD-SF-IB, Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

 Score =  105 bits (264), Expect = 4e-28
 Identities = 41/190 (21%), Positives = 66/190 (34%), Gaps = 19/190 (10%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQ--LRSTLP-WNSLMDRMMKELHSQGK--T 59
           + +FDFD TL   DS   ++ ++  T+       R       S  D + + L    +  +
Sbjct: 1   LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRS 60

Query: 60  VEDIANCLRQCPLDSHVAAAIKSAH-SLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
            E     L +       A  + S     G D  IVS    F++E + E  G      +++
Sbjct: 61  EEVAKEFLARQVALRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLG----IDDVF 116

Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG 178
            N    D+ G L   P            + P   CKG VL  +        ++ I +GD 
Sbjct: 117 ANRLEFDDNGLL-TGPIE--------GQVNPEGECKGKVLKELLEESKITLKKIIAVGDS 167

Query: 179 RGDFCPTLKL 188
             D       
Sbjct: 168 VNDLPMLKLA 177

This model represents a subfamily of the Haloacid Dehalogenase superfamily of aspartate-nucleophile hydrolases. Subfamily IA, B, C and D are distinguished from the rest of the superfamily by the presence of a variable domain between the first and second conserved catalytic motifs. In subfamilies IA and IB, this domain consists of an alpha-helical bundle. It was necessary to model these two subfamilies separately, breaking them at a an apparent phylogenetic bifurcation, so that the resulting model(s) are not so broadly defined that members of subfamily III (which lack the variable domain) are included. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences [Unknown function, Enzymes of unknown specificity]. Length = 177

>gnl|CDD|223620 COG0546, Gph, Predicted phosphatases [General function prediction only]

 Score = 42.8 bits (101), Expect = 6e-05
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 17/132 (12%)

Query: 5   VVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQG-- 57
            ++FD D TL+D   D     N  + ++GL  L  +    L    L + + + L      
Sbjct: 6   AILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEE 65

Query: 58  KTVEDIANC----------LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH 107
              E +             L +  L   V   + +  S G  L IV++  +  ++ +++ 
Sbjct: 66  AAAELVERLREEFLTAYAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKA 125

Query: 108 HGLLGCFSEIYT 119
            GL   F  I  
Sbjct: 126 LGLADYFDVIVG 137

Length = 220

>gnl|CDD|222115 pfam13419, HAD_2, Haloacid dehalogenase-like hydrolase

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 13/126 (10%)

Query: 6   VVFDFDRTLID------DDSDNWVVTQMGLTHLFNQLRSTLP------WNSLMDRMMKEL 53
           ++FD D TLID      +   +    ++GL     +LR             L+     + 
Sbjct: 1   IIFDLDGTLIDFDPVIFEALRDLAAERLGLDISAEELREAGGLPFDEALADLLREHPIDP 60

Query: 54  HSQGKTVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGC 113
               + + +     R       V   ++   + G  L I+S+ ++  +E ++E  GLL  
Sbjct: 61  DEILEALLEYNLESR-LEPFPDVVELLRRLKAKGVKLVILSNGSREAVERLLEKLGLLDL 119

Query: 114 FSEIYT 119
           F  ++T
Sbjct: 120 FDAVFT 125

Length = 176

>gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism]

 Score = 41.5 bits (98), Expect = 1e-04
 Identities = 36/184 (19%), Positives = 60/184 (32%), Gaps = 27/184 (14%)

Query: 6   VVFDFDRTLIDDDS-----DNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV 60
            VFD D TLI+ +          V +  L      +R  L +   +   +  L   G  V
Sbjct: 8   AVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVALLK--GLPV 65

Query: 61  EDIANCLRQCPLDSHVA-AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYT 119
           E +     +    +  A   + +  + G  + I+S    F +E I E    LG    +  
Sbjct: 66  EVLEEVREEFLRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAE---RLG-IDYVVA 121

Query: 120 NPTYVDEQGRL--RILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGD 177
           N     + G+L  R++              C     K   L  +    G   +  +  GD
Sbjct: 122 N-ELEIDDGKLTGRVVGPI-----------CDGE-GKAKALRELAAELGIPLEETVAYGD 168

Query: 178 GRGD 181
              D
Sbjct: 169 SAND 172

Length = 212

>gnl|CDD|223943 COG1011, COG1011, Predicted hydrolase (HAD superfamily) [General function prediction only]

 Score = 38.3 bits (89), Expect = 0.002
 Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 51/199 (25%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMGLTHL-----FNQLRSTLPWNSLMDR--MMKELHSQG 57
            ++FD D TL+D DS  +         +       +L        L  R    +     G
Sbjct: 6   AILFDLDGTLLDFDSAEFRAVLAEFAEIGVPETLEELALLKLIEKLEARFLRGEYTGEYG 65

Query: 58  KTVEDIANCLRQCPLDS-----------------HVAAAIKSAHSLGCDLK--IVSDANQ 98
            T+E +   L +   D                      A+++   LG   K  I+++  +
Sbjct: 66  LTLERLLELLERLLGDEDAELVEELLAALAKLLPDYPEALEALKELGKKYKLGILTNGAR 125

Query: 99  FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL 158
            + E  +   GLL  F  ++      ++ G  +  P                      + 
Sbjct: 126 PHQERKLRQLGLLDYFDAVFI----SEDVGVAKPDPE---------------------IF 160

Query: 159 DHVCTSFGCGKQRFIYLGD 177
           ++     G   +  +++GD
Sbjct: 161 EYALEKLGVPPEEALFVGD 179

Length = 229

>gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 24/133 (18%), Positives = 38/133 (28%), Gaps = 29/133 (21%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPW---NSLM----DRMMKELHSQG 57
            VVFD D TL D +    V     L      L   +      +L     + +++ L  + 
Sbjct: 3   AVVFDLDGTLTDGEPV--VPEAEALLEAAAALGVAIVIAAGENLTKEGREELVRRLLLRA 60

Query: 58  K--------------------TVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDAN 97
                                 +  +       PL      A+K     G  L I++  N
Sbjct: 61  LAGEELLEELLRAGATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDN 120

Query: 98  QFYIETIMEHHGL 110
           +     I    GL
Sbjct: 121 RLTANAIARLLGL 133

This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	265
KOG3120	256	consensus Predicted haloacid dehalogenase-like hyd	100.0
PF06888	234	Put_Phosphatase: Putative Phosphatase; InterPro: I	100.0
COG0546	220	Gph Predicted phosphatases [General function predi	99.93
TIGR01489	188	DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent	99.93
PRK13288	214	pyrophosphatase PpaX; Provisional	99.92
PLN03243	260	haloacid dehalogenase-like hydrolase; Provisional	99.92
TIGR03351	220	PhnX-like phosphonatase-like hydrolase. This clade	99.92
PLN02954	224	phosphoserine phosphatase	99.92
PRK13226	229	phosphoglycolate phosphatase; Provisional	99.92
PRK13478	267	phosphonoacetaldehyde hydrolase; Provisional	99.91
PRK13225	273	phosphoglycolate phosphatase; Provisional	99.91
PLN02770	248	haloacid dehalogenase-like hydrolase family protei	99.91
PRK10826	222	2-deoxyglucose-6-phosphatase; Provisional	99.9
TIGR01422	253	phosphonatase phosphonoacetaldehyde hydrolase. Thi	99.9
PRK09449	224	dUMP phosphatase; Provisional	99.9
PRK11587	218	putative phosphatase; Provisional	99.9
TIGR01454	205	AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes	99.9
PRK13222	226	phosphoglycolate phosphatase; Provisional	99.9
TIGR01449	213	PGP_bact 2-phosphoglycolate phosphatase, prokaryot	99.9
PRK09552	219	mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp	99.89
TIGR00338	219	serB phosphoserine phosphatase SerB. Phosphoserine	99.89
PLN02575	381	haloacid dehalogenase-like hydrolase	99.89
PRK14988	224	GMP/IMP nucleotidase; Provisional	99.89
PRK13223	272	phosphoglycolate phosphatase; Provisional	99.89
TIGR02253	221	CTE7 HAD superfamily (subfamily IA) hydrolase, TIG	99.89
COG0637	221	Predicted phosphatase/phosphohexomutase [General f	99.88
TIGR01491	201	HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa	99.88
TIGR01428	198	HAD_type_II 2-haloalkanoic acid dehalogenase, type	99.88
PRK13582	205	thrH phosphoserine phosphatase; Provisional	99.87
PRK10563	221	6-phosphogluconate phosphatase; Provisional	99.87
TIGR02009	185	PGMB-YQAB-SF beta-phosphoglucomutase family hydrol	99.87
TIGR02254	224	YjjG/YfnB HAD superfamily (subfamily IA) hydrolase	99.86
TIGR03333	214	salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl	99.86
PRK11133	322	serB phosphoserine phosphatase; Provisional	99.85
TIGR01990	185	bPGM beta-phosphoglucomutase. The enzyme from L. l	99.85
PRK10725	188	fructose-1-P/6-phosphogluconate phosphatase; Provi	99.85
PLN02940	382	riboflavin kinase	99.85
PRK10748	238	flavin mononucleotide phosphatase; Provisional	99.85
PRK06698	459	bifunctional 5'-methylthioadenosine/S-adenosylhomo	99.84
COG4359	220	Uncharacterized conserved protein [Function unknow	99.84
COG0560	212	SerB Phosphoserine phosphatase [Amino acid transpo	99.84
TIGR02252	203	DREG-2 REG-2-like, HAD superfamily (subfamily IA)	99.84
TIGR02137	203	HSK-PSP phosphoserine phosphatase/homoserine phosp	99.83
TIGR01993	184	Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These	99.83
TIGR01488	177	HAD-SF-IB Haloacid Dehalogenase superfamily, subfa	99.83
COG1011	229	Predicted hydrolase (HAD superfamily) [General fun	99.83
PLN02779	286	haloacid dehalogenase-like hydrolase family protei	99.82
TIGR01548	197	HAD-SF-IA-hyp1 haloacid dehalogenase superfamily,	99.82
PF13419	176	HAD_2: Haloacid dehalogenase-like hydrolase; PDB:	99.81
PRK09456	199	?-D-glucose-1-phosphatase; Provisional	99.8
PRK08942	181	D,D-heptose 1,7-bisphosphate phosphatase; Validate	99.8
TIGR01509	183	HAD-SF-IA-v3 haloacid dehalogenase superfamily, su	99.8
TIGR02247	211	HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li	99.8
PLN02919	1057	haloacid dehalogenase-like hydrolase family protei	99.79
TIGR01549	154	HAD-SF-IA-v1 haloacid dehalogenase superfamily, su	99.79
TIGR00213	176	GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase	99.79
KOG1615	227	consensus Phosphoserine phosphatase [Amino acid tr	99.78
TIGR01656	147	Histidinol-ppas histidinol-phosphate phosphatase f	99.77
PHA02597	197	30.2 hypothetical protein; Provisional	99.76
PRK06769	173	hypothetical protein; Validated	99.75
TIGR01662	132	HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I	99.75
TIGR01490	202	HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol	99.75
PLN02811	220	hydrolase	99.74
TIGR01261	161	hisB_Nterm histidinol-phosphatase. This model desc	99.73
TIGR01664	166	DNA-3'-Pase DNA 3'-phosphatase. The central phosph	99.73
TIGR01493	175	HAD-SF-IA-v2 Haloacid dehalogenase superfamily, su	99.73
TIGR01672	237	AphA HAD superfamily (subfamily IIIB) phosphatase,	99.71
TIGR01685	174	MDP-1 magnesium-dependent phosphatase-1. This mode	99.71
TIGR01670	154	YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho	99.69
TIGR01544	277	HAD-SF-IE haloacid dehalogenase superfamily, subfa	99.68
COG0561	264	Cof Predicted hydrolases of the HAD superfamily [G	99.67
PRK01158	230	phosphoglycolate phosphatase; Provisional	99.67
TIGR01681	128	HAD-SF-IIIC HAD-superfamily phosphatase, subfamily	99.67
PRK15126	272	thiamin pyrimidine pyrophosphate hydrolase; Provis	99.65
cd01427	139	HAD_like Haloacid dehalogenase-like hydrolases. Th	99.65
PRK10513	270	sugar phosphate phosphatase; Provisional	99.65
PRK11590	211	hypothetical protein; Provisional	99.64
PRK10976	266	putative hydrolase; Provisional	99.63
TIGR01545	210	YfhB_g-proteo haloacid dehalogenase superfamily, s	99.62
PRK05446	354	imidazole glycerol-phosphate dehydratase/histidino	99.62
TIGR01691	220	enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen	99.6
KOG3085	237	consensus Predicted hydrolase (HAD superfamily) [G	99.6
PRK10530	272	pyridoxal phosphate (PLP) phosphatase; Provisional	99.6
PRK09484	183	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.59
TIGR01668	170	YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph	99.59
PRK00192	273	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.56
TIGR01487	215	SPP-like sucrose-phosphate phosphatase-like hydrol	99.56
TIGR02726	169	phenyl_P_delta phenylphosphate carboxylase, delta	99.55
PLN02887	580	hydrolase family protein	99.55
TIGR01482	225	SPP-subfamily Sucrose-phosphate phosphatase subfam	99.52
COG2179	175	Predicted hydrolase of the HAD superfamily [Genera	99.51
smart00577	148	CPDc catalytic domain of ctd-like phosphatases.	99.51
KOG3109	244	consensus Haloacid dehalogenase-like hydrolase [Ge	99.51
PF08282	254	Hydrolase_3: haloacid dehalogenase-like hydrolase;	99.51
KOG2914	222	consensus Predicted haloacid-halidohydrolase and r	99.51
COG0241	181	HisB Histidinol phosphatase and related phosphatas	99.51
PRK11009	237	aphA acid phosphatase/phosphotransferase; Provisio	99.48
PRK03669	271	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.48
PF12710	192	HAD: haloacid dehalogenase-like hydrolase; PDB: 3P	99.46
PHA02530	300	pseT polynucleotide kinase; Provisional	99.46
TIGR02463	221	MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r	99.45
TIGR01663	526	PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase	99.45
TIGR00099	256	Cof-subfamily Cof subfamily of IIB subfamily of ha	99.44
PF00702	215	Hydrolase: haloacid dehalogenase-like hydrolase; I	99.44
TIGR01686	320	FkbH FkbH-like domain. The C-terminal portion of t	99.43
PLN02645	311	phosphoglycolate phosphatase	99.42
TIGR01457	249	HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr	99.42
PRK10444	248	UMP phosphatase; Provisional	99.41
PRK10187	266	trehalose-6-phosphate phosphatase; Provisional	99.39
PRK08238	479	hypothetical protein; Validated	99.37
PTZ00174	247	phosphomannomutase; Provisional	99.36
TIGR01485	249	SPP_plant-cyano sucrose-6F-phosphate phosphohydrol	99.35
TIGR01486	256	HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph	99.33
TIGR01484	204	HAD-SF-IIB HAD-superfamily hydrolase, subfamily II	99.32
COG1778	170	Low specificity phosphatase (HAD superfamily) [Gen	99.31
TIGR01684	301	viral_ppase viral phosphatase. These proteins also	99.3
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	99.29
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	99.28
PHA03398	303	viral phosphatase superfamily protein; Provisional	99.26
COG0647	269	NagD Predicted sugar phosphatases of the HAD super	99.25
TIGR02471	236	sucr_syn_bact_C sucrose phosphate synthase, sucros	99.2
TIGR02251	162	HIF-SF_euk Dullard-like phosphatase domain. This d	99.2
TIGR01533	266	lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil	99.18
TIGR02461	225	osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat	99.18
PRK12702	302	mannosyl-3-phosphoglycerate phosphatase; Reviewed	99.15
PRK14502	694	bifunctional mannosyl-3-phosphoglycerate synthase/	99.13
PF12689	169	Acid_PPase: Acid Phosphatase; InterPro: IPR010036	99.13
PF08645	159	PNK3P: Polynucleotide kinase 3 phosphatase; InterP	99.05
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	99.04
PLN02382	413	probable sucrose-phosphatase	99.03
PLN02423	245	phosphomannomutase	99.03
PF09419	168	PGP_phosphatase: Mitochondrial PGP phosphatase; In	99.0
PRK14501	726	putative bifunctional trehalose-6-phosphate syntha	98.99
TIGR00685	244	T6PP trehalose-phosphatase. At least 18 distinct s	98.97
PTZ00445	219	p36-lilke protein; Provisional	98.96
COG4996	164	Predicted phosphatase [General function prediction	98.96
TIGR02244	343	HAD-IG-Ncltidse HAD superfamily (subfamily IG) hyd	98.9
PLN02177	497	glycerol-3-phosphate acyltransferase	98.8
PLN02205	854	alpha,alpha-trehalose-phosphate synthase [UDP-form	98.8
TIGR01512	536	ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo	98.8
TIGR01525	556	ATPase-IB_hvy heavy metal translocating P-type ATP	98.8
smart00775	157	LNS2 LNS2 domain. This domain is found in Saccharo	98.79
PF05116	247	S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter	98.78
PLN02580	384	trehalose-phosphatase	98.77
PF13344	101	Hydrolase_6: Haloacid dehalogenase-like hydrolase;	98.76
PF13242	75	Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OY	98.74
TIGR01460	236	HAD-SF-IIA Haloacid Dehalogenase Superfamily Class	98.73
TIGR01459	242	HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas	98.64
TIGR01511	562	ATPase-IB1_Cu copper-(or silver)-translocating P-t	98.63
COG4229	229	Predicted enolase-phosphatase [Energy production a	98.59
COG4087	152	Soluble P-type ATPase [General function prediction	98.58
TIGR02250	156	FCP1_euk FCP1-like phosphatase, phosphatase domain	98.53
KOG2882	306	consensus p-Nitrophenyl phosphatase [Inorganic ion	98.53
COG4030	315	Uncharacterized protein conserved in archaea [Func	98.53
PRK10671	834	copA copper exporting ATPase; Provisional	98.52
COG2217	713	ZntA Cation transport ATPase [Inorganic ion transp	98.52
PF05822	246	UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); Inter	98.48
PLN03017	366	trehalose-phosphatase	98.47
KOG3040	262	consensus Predicted sugar phosphatase (HAD superfa	98.44
TIGR01675	229	plant-AP plant acid phosphatase. This model explic	98.44
TIGR01689	126	EcbF-BcbF capsule biosynthesis phosphatase. Due to	98.39
PF03767	229	Acid_phosphat_B: HAD superfamily, subfamily IIIB (	98.37
TIGR01458	257	HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr	98.37
TIGR01522	884	ATPase-IIA2_Ca golgi membrane calcium-translocatin	98.34
TIGR01497	675	kdpB K+-transporting ATPase, B subunit. One sequen	98.34
PRK01122	679	potassium-transporting ATPase subunit B; Provision	98.33
PLN02151	354	trehalose-phosphatase	98.33
PRK14010	673	potassium-transporting ATPase subunit B; Provision	98.33
PRK11033	741	zntA zinc/cadmium/mercury/lead-transporting ATPase	98.29
PF05152	297	DUF705: Protein of unknown function (DUF705); Inte	98.26
PF03031	159	NIF: NLI interacting factor-like phosphatase; Inte	98.18
TIGR01680	275	Veg_Stor_Prot vegetative storage protein. The prot	98.17
KOG0207	951	consensus Cation transport ATPase [Inorganic ion t	98.1
PRK15122	903	magnesium-transporting ATPase; Provisional	98.09
TIGR01524	867	ATPase-IIIB_Mg magnesium-translocating P-type ATPa	98.09
PRK10517	902	magnesium-transporting ATPase MgtA; Provisional	98.06
COG3769	274	Predicted hydrolase (HAD superfamily) [General fun	98.05
TIGR01116	917	ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium	98.04
TIGR01647	755	ATPase-IIIA_H plasma-membrane proton-efflux P-type	98.03
PF11019	252	DUF2608: Protein of unknown function (DUF2608); In	98.03
COG2503	274	Predicted secreted acid phosphatase [General funct	97.99
TIGR01517	941	ATPase-IIB_Ca plasma-membrane calcium-translocatin	97.97
PF08235	157	LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209	97.93
TIGR01523	1053	ATPase-IID_K-Na potassium and/or sodium efflux P-t	97.88
COG3700	237	AphA Acid phosphatase (class B) [General function	97.87
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.82
PLN02499	498	glycerol-3-phosphate acyltransferase	97.72
TIGR01106	997	ATPase-IIC_X-K sodium or proton efflux -- potassiu	97.72
KOG0202	972	consensus Ca2+ transporting ATPase [Inorganic ion	97.72
COG0474	917	MgtA Cation transport ATPase [Inorganic ion transp	97.71
KOG3128	298	consensus Uncharacterized conserved protein [Funct	97.6
TIGR02245	195	HAD_IIID1 HAD-superfamily subfamily IIID hydrolase	97.59
PF06941	191	NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosol	97.56
COG3882	574	FkbH Predicted enzyme involved in methoxymalonyl-A	97.46
PLN03063	797	alpha,alpha-trehalose-phosphate synthase (UDP-form	97.44
COG1877	266	OtsB Trehalose-6-phosphatase [Carbohydrate transpo	97.35
TIGR01456	321	CECR5 HAD-superfamily class IIA hydrolase, TIGR014	97.32
PF05761	448	5_nucleotid: 5' nucleotidase family; InterPro: IPR	97.29
PF02358	235	Trehalose_PPase: Trehalose-phosphatase; InterPro:	97.23
TIGR01652	1057	ATPase-Plipid phospholipid-translocating P-type AT	97.11
TIGR01494	499	ATPase_P-type ATPase, P-type (transporting), HAD s	97.09
TIGR01657	1054	P-ATPase-V P-type ATPase of unknown pump specifici	97.06
COG2216	681	KdpB High-affinity K+ transport system, ATPase cha	96.87
KOG2134	422	consensus Polynucleotide kinase 3' phosphatase [Re	96.82
PLN03190	1178	aminophospholipid translocase; Provisional	96.81
TIGR01452	279	PGP_euk phosphoglycolate/pyridoxal phosphate phosp	96.67
KOG2116	738	consensus Protein involved in plasmid maintenance/	96.54
TIGR02468	1050	sucrsPsyn_pln sucrose phosphate synthase/possible	96.13
KOG2961	190	consensus Predicted hydrolase (HAD superfamily) [G	95.89
COG4502	180	5'(3')-deoxyribonucleotidase [Nucleotide transport	95.55
KOG0204	1034	consensus Calcium transporting ATPase [Inorganic i	95.14
PLN03064	934	alpha,alpha-trehalose-phosphate synthase (UDP-form	95.02
KOG3189	252	consensus Phosphomannomutase [Lipid transport and	95.0
KOG2630	254	consensus Enolase-phosphatase E-1 [Amino acid tran	94.92
KOG2470	510	consensus Similar to IMP-GMP specific 5'-nucleotid	94.71
KOG1618	389	consensus Predicted phosphatase [General function	94.69
KOG1605	262	consensus TFIIF-interacting CTD phosphatase, inclu	94.5
KOG0206	1151	consensus P-type ATPase [General function predicti	94.25
COG4850	373	Uncharacterized conserved protein [Function unknow	93.98
COG5610	635	Predicted hydrolase (HAD superfamily) [General fun	93.73
KOG0210	1051	consensus P-type ATPase [Inorganic ion transport a	93.73
TIGR01658	274	EYA-cons_domain eyes absent protein conserved doma	91.4
COG5083	580	SMP2 Uncharacterized protein involved in plasmid m	91.06
COG5663	194	Uncharacterized conserved protein [Function unknow	88.11
KOG0209	1160	consensus P-type ATPase [Inorganic ion transport a	87.31
KOG0203	1019	consensus Na+/K+ ATPase, alpha subunit [Inorganic	84.16
PF06437	408	ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0	83.05
KOG4549	144	consensus Magnesium-dependent phosphatase [General	80.58
PF06189	264	5-nucleotidase: 5'-nucleotidase; InterPro: IPR0103	80.08

>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=100.00  E-value=9.4e-36  Score=230.91  Aligned_cols=237  Identities=57%  Similarity=1.043  Sum_probs=222.6

Q ss_pred             CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCC---hhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHH
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAA   78 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e   78 (265)
                      +..+++||||-||+|.+++.++...++....+.++..+..   |..++++.++++++.|.+.+++...+..+++.||+.+
T Consensus        12 ~ril~~FDFD~TIid~dSD~wVv~~lp~~~l~~qL~~t~p~~~Wne~M~rv~k~Lheqgv~~~~ik~~~r~iP~~Pgmv~   91 (256)
T KOG3120|consen   12 PRILLVFDFDRTIIDQDSDNWVVDELPTTDLFNQLRDTYPKGFWNELMDRVFKELHEQGVRIAEIKQVLRSIPIVPGMVR   91 (256)
T ss_pred             CcEEEEEecCceeecCCcchHHHHhcccchhHHHHHHhcccchHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCCCccHHH
Confidence            4578999999999999999999999999998888877765   9999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCC-cEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHH
Q 044617           79 AIKSAHSLGC-DLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFV  157 (265)
Q Consensus        79 ~l~~l~~~g~-~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~  157 (265)
                      +|+.+++.|. .+.|+|.+...+++.+++++|+.+.|..|++|...+|++|.+.+.||+.    +++|..||.+.||+.+
T Consensus        92 lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~IfTNPa~~da~G~L~v~pyH~----~hsC~~CPsNmCKg~V  167 (256)
T KOG3120|consen   92 LIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSEIFTNPACVDASGRLLVRPYHT----QHSCNLCPSNMCKGLV  167 (256)
T ss_pred             HHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHHHhcCCcccCCCCcEEeecCCC----CCccCcCchhhhhhHH
Confidence            9999999985 9999999999999999999999999999999999999999999999994    7999999999999999


Q ss_pred             HHHHHHhc---CCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHH
Q 044617          158 LDHVCTSF---GCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLI  234 (265)
Q Consensus       158 i~~~~~~~---gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~  234 (265)
                      +.++....   |+..++++|+|||.||+++..+++..++++.+-||+++++...+|....+.+..|.+-.|+..+|.+++
T Consensus       168 l~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl~k~~~~~p~~~kasV~~W~sg~d~~~~L~~li  247 (256)
T KOG3120|consen  168 LDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPLWKLISANPMLLKASVLEWSSGEDLERILQQLI  247 (256)
T ss_pred             HHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCchHhhhhcCcceeeeeEEecccHHHHHHHHHHHH
Confidence            99887664   688899999999999999999999999999999999999888888888899999999999999999999


Q ss_pred             Hhhccccc
Q 044617          235 GAISIKED  242 (265)
Q Consensus       235 ~~~~~~~~  242 (265)
                      +.+..+|+
T Consensus       248 k~~~~~~d  255 (256)
T KOG3120|consen  248 KTIQVEED  255 (256)
T ss_pred             HHhhhccC
Confidence            99888775

>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []

Probab=100.00  E-value=3.4e-35  Score=237.75  Aligned_cols=225  Identities=52%  Similarity=0.940  Sum_probs=207.0

Q ss_pred             EEEEecCCCCCCCCchHHHHHHhCchHHHHHHH---ccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHH
Q 044617            5 VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLR---STLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIK   81 (265)
Q Consensus         5 ~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~   81 (265)
                      +|+||||+||+|.+++.++.+.++.+....++.   ....|..+++..++.++..|.+.+++.+.+..+++.||+.++++
T Consensus         2 LvvfDFD~TIvd~dsd~~v~~~l~~~~~~~~l~~~~~~~~wt~~m~~vl~~L~~~gvt~~~I~~~l~~ip~~pgm~~~l~   81 (234)
T PF06888_consen    2 LVVFDFDHTIVDQDSDDWVIELLPPEELPEELRESYPKGGWTEYMDRVLQLLHEQGVTPEDIRDALRSIPIDPGMKELLR   81 (234)
T ss_pred             EEEEeCCCCccCCccHHHHHHhcCCcccHHHHHHhccccchHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCccHHHHHH
Confidence            689999999999999999999998775544433   44579999999999999999999999999999999999999999


Q ss_pred             HH--HHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHH
Q 044617           82 SA--HSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLD  159 (265)
Q Consensus        82 ~l--~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~  159 (265)
                      .+  ++.|+.++|+|++...+++.++++.|+...|+.|++|...++++|.+.+.||+.     ++|..|+.|.||..+++
T Consensus        82 ~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~I~TNpa~~~~~G~l~v~pyh~-----h~C~~C~~NmCK~~il~  156 (234)
T PF06888_consen   82 FLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSEIFTNPACFDADGRLRVRPYHS-----HGCSLCPPNMCKGKILE  156 (234)
T ss_pred             HHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccceEEeCCceecCCceEEEeCccC-----CCCCcCCCccchHHHHH
Confidence            99  557999999999999999999999999999999999999999999999888884     77899999999999999


Q ss_pred             HHHHhc---CCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHH
Q 044617          160 HVCTSF---GCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLI  234 (265)
Q Consensus       160 ~~~~~~---gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~  234 (265)
                      ++++..   |+..++++|||||.||+.++++++..++++++.||+.++++.+++....+.+..|++..||.+.|++++
T Consensus       157 ~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W~~g~~i~~~l~~~i  234 (234)
T PF06888_consen  157 RLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPWSSGEEILEILLQLI  234 (234)
T ss_pred             HHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEecCCHHHHHHHHHhhC
Confidence            999884   678899999999999999999999999999999999999999887778899999999999999998874

It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity

>COG0546 Gph Predicted phosphatases [General function prediction only]

Probab=99.93  E-value=6e-25  Score=179.50  Aligned_cols=201  Identities=20%  Similarity=0.269  Sum_probs=135.4

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH-HHHHHc--cCChhHHHHHHHHHHH-hCC-----CCHHHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL-FNQLRS--TLPWNSLMDRMMKELH-SQG-----KTVEDIANC   66 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~   66 (265)
                      |+++.|+||+||||+|+...     ..+++.++.+.. ...+..  ..+............. ...     ...+.+...
T Consensus         2 ~~~~~iiFDlDGTL~Ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (220)
T COG0546           2 MMIKAILFDLDGTLVDSAEDILRAFNAALAELGLPPLDEEEIRQLIGLGLDELIERLLGEADEEAAAELVERLREEFLTA   81 (220)
T ss_pred             CCCCEEEEeCCCccccChHHHHHHHHHHHHHcCCCCCCHHHHHHHhcCCHHHHHHHHhccccchhHHHHHHHHHHHHHHH
Confidence            56899999999999999753     566777777632 111111  0111111111100000 000     000111111


Q ss_pred             h-c--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617           67 L-R--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        67 ~-~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      . .  ...++||++++|..|+++|++++|+||+....++..++++|+..+|+.+++..              .....|| 
T Consensus        82 ~~~~~~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g~~--------------~~~~~KP-  146 (220)
T COG0546          82 YAELLESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVGGD--------------DVPPPKP-  146 (220)
T ss_pred             HHhhccCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEcCC--------------CCCCCCc-
Confidence            1 1  24789999999999999999999999999999999999999999999999831              1112356 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCH
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSA  223 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (265)
                                +|..+..+++++|++|++++||||+.+|+.+|+++| ...+.+.+|+.....+.  ...++..+   +++
T Consensus       147 ----------~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag-~~~v~v~~g~~~~~~l~--~~~~d~vi---~~~  210 (220)
T COG0546         147 ----------DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAG-VPAVGVTWGYNSREELA--QAGADVVI---DSL  210 (220)
T ss_pred             ----------CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcC-CCEEEEECCCCCCcchh--hcCCCEEE---CCH
Confidence                      899999999999999889999999999999999988 44444456553222222  12345666   999


Q ss_pred             HHHHHHHHH
Q 044617          224 EELKKILLH  232 (265)
Q Consensus       224 ~el~~~l~~  232 (265)
                      .||...+..
T Consensus       211 ~el~~~l~~  219 (220)
T COG0546         211 AELLALLAE  219 (220)
T ss_pred             HHHHHHHhc
Confidence            999887753

>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.93  E-value=9.9e-24  Score=168.08  Aligned_cols=183  Identities=37%  Similarity=0.655  Sum_probs=143.5

Q ss_pred             eEEEEecCCCCCCCCchHHHHHHhCchH---HHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617            4 VVVVFDFDRTLIDDDSDNWVVTQMGLTH---LFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI   80 (265)
Q Consensus         4 k~iifD~DGTL~ds~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l   80 (265)
                      -+|+|||||||++.+....+.+.++.+.   ..........|......+...+...+...+.+...+...+++||+.++|
T Consensus         2 ~~iiFD~dgTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ll   81 (188)
T TIGR01489         2 VVVVSDFDGTITLNDSDDWITDKFGPPEANRLLDGVLSKTLSIKFMDRRMKGLLPSGLKEDEILEVLKSAPIDPGFKEFI   81 (188)
T ss_pred             eEEEEeCCCcccCCCchHHHHHhcCcchhhHHHHHHhhcCCchHHHHHHHHHHhhcCCCHHHHHHHHHhCCCCccHHHHH
Confidence            4789999999999998877777776332   2222333334555555554445555667777877777889999999999


Q ss_pred             HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHH
Q 044617           81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDH  160 (265)
Q Consensus        81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~  160 (265)
                      +.|+++|++++|+||+....++..++++++..+|+.+++++..++++|...+.+..     ++.|..++.|.+|+..+++
T Consensus        82 ~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~~~~~~~g~~~~~~~~-----~~~~~~~~~g~~K~~~~~~  156 (188)
T TIGR01489        82 AFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEIYSNPASFDNDGRHIVWPHH-----CHGCCSCPCGCCKGKVIHK  156 (188)
T ss_pred             HHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEEeccCceECCCCcEEEecCC-----CCccCcCCCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999998888877776654433     2233334567789999999


Q ss_pred             HHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          161 VCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       161 ~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      +.+++   +++++||||+.+|+++|+   .++++|++
T Consensus       157 ~~~~~---~~~~i~iGD~~~D~~aa~---~~d~~~ar  187 (188)
T TIGR01489       157 LSEPK---YQHIIYIGDGVTDVCPAK---LSDVVFAK  187 (188)
T ss_pred             HHhhc---CceEEEECCCcchhchHh---cCCccccC
Confidence            98875   689999999999999995   46888876

Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.

>PRK13288 pyrophosphatase PpaX; Provisional

Probab=99.92  E-value=1.1e-24  Score=177.40  Aligned_cols=200  Identities=13%  Similarity=0.047  Sum_probs=131.6

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchH-HHHHHHccC--ChhHHHHHHHHHHHhC--CCCHHHHHH-HhcC
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTH-LFNQLRSTL--PWNSLMDRMMKELHSQ--GKTVEDIAN-CLRQ   69 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~   69 (265)
                      |++++|+||+||||+|+...     ..++++++... ....+....  ........+.......  ......... ....
T Consensus         1 m~~~~viFD~DGTL~ds~~~~~~a~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (214)
T PRK13288          1 MKINTVLFDLDGTLINTNELIISSFLHTLKTYYPNQYKREDVLPFIGPSLHDTFSKIDESKVEEMITTYREFNHEHHDEL   80 (214)
T ss_pred             CCccEEEEeCCCcCccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCcCHHHHHHhcCHHHHHHHHHHHHHHHHHhhhhh
Confidence            78899999999999999652     44555555431 111111111  1111111100000000  000000011 1124


Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      ..++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++.+              .....||       
T Consensus        81 ~~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i~~~~--------------~~~~~Kp-------  139 (214)
T PRK13288         81 VTEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVVITLD--------------DVEHAKP-------  139 (214)
T ss_pred             cccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEEEecC--------------cCCCCCC-------
Confidence            5789999999999999999999999999999999999999999999998852              1112355       


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI  229 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  229 (265)
                          ++..+.+++++++++++++++|||+.+|+.+|+++|...+++ .+++.....+.+  ..++..+   +++.||.++
T Consensus       140 ----~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v-~~g~~~~~~l~~--~~~~~~i---~~~~~l~~~  209 (214)
T PRK13288        140 ----DPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGV-AWTIKGREYLEQ--YKPDFML---DKMSDLLAI  209 (214)
T ss_pred             ----CcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEE-cCCCCCHHHHhh--cCcCEEE---CCHHHHHHH
Confidence                899999999999999999999999999999999988765554 444432222221  1234445   899998876


Q ss_pred             HH
Q 044617          230 LL  231 (265)
Q Consensus       230 l~  231 (265)
                      +.
T Consensus       210 i~  211 (214)
T PRK13288        210 VG  211 (214)
T ss_pred             Hh
Confidence            64

>PLN03243 haloacid dehalogenase-like hydrolase; Provisional

Probab=99.92  E-value=5.7e-24  Score=177.31  Aligned_cols=203  Identities=12%  Similarity=0.071  Sum_probs=143.6

Q ss_pred             ceEEEEecCCCCCCCCc-h-----HHHHHHhCchHHHHHHHc---cCChhHHHHHHHHHHHhCCCCHH---H----HHHH
Q 044617            3 DVVVVFDFDRTLIDDDS-D-----NWVVTQMGLTHLFNQLRS---TLPWNSLMDRMMKELHSQGKTVE---D----IANC   66 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~-~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~   66 (265)
                      .++|+|||||||+||.. .     ..+++++|++....+...   ..........+..    .....+   .    ....
T Consensus        24 ~k~vIFDlDGTLvDS~~~~~~~a~~~~~~~~G~~~~~~e~~~~~~G~~~~~~~~~l~~----~~~~~~~~~~l~~~~~~~   99 (260)
T PLN03243         24 WLGVVLEWEGVIVEDDSELERKAWRALAEEEGKRPPPAFLLKRAEGMKNEQAISEVLC----WSRDFLQMKRLAIRKEDL   99 (260)
T ss_pred             ceEEEEeCCCceeCCchHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhc----cCCCHHHHHHHHHHHHHH
Confidence            68999999999999953 2     455666676532222221   1122222211110    001110   0    1111


Q ss_pred             ----h-cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccC
Q 044617           67 ----L-RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLS  141 (265)
Q Consensus        67 ----~-~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~k  141 (265)
                          . ....++||+.++|+.|+++|++++|+||+....+...++++|+..+|+.+++.+              .....|
T Consensus       100 ~~~~~~~~~~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~ii~~~--------------d~~~~K  165 (260)
T PLN03243        100 YEYMQGGLYRLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVVLAAE--------------DVYRGK  165 (260)
T ss_pred             HHHHHccCcccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEEEecc--------------cCCCCC
Confidence                1 246789999999999999999999999999999999999999999999999852              111235


Q ss_pred             CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCC
Q 044617          142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWS  221 (265)
Q Consensus       142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
                      |           +|.++..+++++|+.+++++||||+.+|+.+|+++|+..+++.+  +.....+.    .++..+   +
T Consensus       166 P-----------~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g--~~~~~~l~----~ad~vi---~  225 (260)
T PLN03243        166 P-----------DPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG--KHPVYELS----AGDLVV---R  225 (260)
T ss_pred             C-----------CHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEec--CCchhhhc----cCCEEe---C
Confidence            6           89999999999999999999999999999999998887666652  22222121    234445   9


Q ss_pred             CHHHHHHHHHHHHHhhcccccc
Q 044617          222 SAEELKKILLHLIGAISIKEDV  243 (265)
Q Consensus       222 ~~~el~~~l~~~~~~~~~~~~~  243 (265)
                      ++.||......-+.++..+|-+
T Consensus       226 ~~~el~~~~~~~~~~~~~~~~~  247 (260)
T PLN03243        226 RLDDLSVVDLKNLSDLDSPEFQ  247 (260)
T ss_pred             CHHHHHHHHHhhhhccCCcccc
Confidence            9999999888888888877765

>TIGR03351 PhnX-like phosphonatase-like hydrolase

Probab=99.92  E-value=8e-24  Score=172.97  Aligned_cols=194  Identities=14%  Similarity=0.109  Sum_probs=132.1

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHc---cCChhHHHHHHHHHHHhCCCCHHH-------HH---
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRS---TLPWNSLMDRMMKELHSQGKTVED-------IA---   64 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-------~~---   64 (265)
                      +++|+|||||||+|+...     ..+++++|.+....+...   ..........+.   ...+...+.       +.   
T Consensus         1 ~k~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   77 (220)
T TIGR03351         1 ISLVVLDMAGTTVDEDGLVYRALRQAVTAAGLSPTPEEVQSAWMGQSKIEAIRALL---ALDGADEAEAQAAFADFEERL   77 (220)
T ss_pred             CcEEEEecCCCeeccCchHHHHHHHHHHHcCCCCCHHHHHHhhcCCCHHHHHHHHH---hccCCCHHHHHHHHHHHHHHH
Confidence            478999999999999763     445666666532222222   111222222211   111222111       11   


Q ss_pred             -HHh--cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc--cccceEEecCceecCCCceEEeeccccc
Q 044617           65 -NCL--RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL--GCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        65 -~~~--~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~--~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                       ..+  ....++||+.++|++|+++|++++|+||+....+...++.+|+.  .+|+.+++..              ....
T Consensus        78 ~~~~~~~~~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~~i~~~~--------------~~~~  143 (220)
T TIGR03351        78 AEAYDDGPPVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVDAVVCPS--------------DVAA  143 (220)
T ss_pred             HHHhcccCCccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCCEEEcCC--------------cCCC
Confidence             111  13579999999999999999999999999999999999999998  8999988852              1112


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcCCC-CceEEEEcCCCCCcccccCCCCCC-eeeecCCCchhhhhhcCCCeeeEEE
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGRGDFCPTLKLRDCD-FVMPRKNYPLWDRICSNPMLIKAKV  217 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~~Di~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~  217 (265)
                      .||           +|.++.++++++|+. |+++++|||+.+|+.+|+++|+.. +++. +|+.....+...  .++..+
T Consensus       144 ~KP-----------~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~--~~~~~i  209 (220)
T TIGR03351       144 GRP-----------APDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRH--PHTHVL  209 (220)
T ss_pred             CCC-----------CHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhc--CCceee
Confidence            356           899999999999997 799999999999999999988877 4444 444333323211  233445


Q ss_pred             EeCCCHHHHHHHH
Q 044617          218 HEWSSAEELKKIL  230 (265)
Q Consensus       218 ~~~~~~~el~~~l  230 (265)
                         +++.||..++
T Consensus       210 ---~~~~~l~~~~  219 (220)
T TIGR03351       210 ---DSVADLPALL  219 (220)
T ss_pred             ---cCHHHHHHhh
Confidence               8888887653

This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the

>PLN02954 phosphoserine phosphatase

Probab=99.92  E-value=2.5e-23  Score=170.47  Aligned_cols=207  Identities=15%  Similarity=0.237  Sum_probs=137.0

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHcc-----CChhHHHHHHHHHHHhCCCCHHHHHHHhcC--CCCC
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRST-----LPWNSLMDRMMKELHSQGKTVEDIANCLRQ--CPLD   73 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~   73 (265)
                      |++|+|+|||||||++++....+++.+|.+....+....     ..+...+...   +.......+.+...+..  ..++
T Consensus        10 ~~~k~viFDfDGTL~~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~   86 (224)
T PLN02954         10 RSADAVCFDVDSTVCVDEGIDELAEFCGAGEAVAEWTAKAMGGSVPFEEALAAR---LSLFKPSLSQVEEFLEKRPPRLS   86 (224)
T ss_pred             ccCCEEEEeCCCcccchHHHHHHHHHcCChHHHHHHHHHHHCCCCCHHHHHHHH---HHHcCCCHHHHHHHHHHccCCCC
Confidence            467999999999999999989999999986544433321     2333322222   22222334444444433  5689


Q ss_pred             hhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCc
Q 044617           74 SHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLC  153 (265)
Q Consensus        74 ~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~  153 (265)
                      ||+.++|+.|+++|++++|+|++....+..+++.+|+...  .++++...++.+|.+.......    +     ...+.+
T Consensus        87 pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~--~~~~~~~~~~~~g~~~g~~~~~----~-----~~~~~~  155 (224)
T PLN02954         87 PGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPE--NIFANQILFGDSGEYAGFDENE----P-----TSRSGG  155 (224)
T ss_pred             ccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChh--hEEEeEEEEcCCCcEECccCCC----c-----ccCCcc
Confidence            9999999999999999999999999999999999998631  2344333344334333211100    0     011334


Q ss_pred             hHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHH
Q 044617          154 KGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKIL  230 (265)
Q Consensus       154 K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l  230 (265)
                      |+..++.+++++|.  ++++||||+.+|+.+|++ ++.+++++.+++........   .++..+   +++.||.+++
T Consensus       156 K~~~i~~~~~~~~~--~~~i~iGDs~~Di~aa~~-~~~~~~~~~~~~~~~~~~~~---~~~~~i---~~~~el~~~~  223 (224)
T PLN02954        156 KAEAVQHIKKKHGY--KTMVMIGDGATDLEARKP-GGADLFIGYGGVQVREAVAA---KADWFV---TDFQDLIEVL  223 (224)
T ss_pred             HHHHHHHHHHHcCC--CceEEEeCCHHHHHhhhc-CCCCEEEecCCCccCHHHHh---cCCEEE---CCHHHHHHhh
Confidence            99999999998875  689999999999999766 55666666544332222221   234555   8898887754

>PRK13226 phosphoglycolate phosphatase; Provisional

Probab=99.92  E-value=3.9e-24  Score=175.81  Aligned_cols=195  Identities=15%  Similarity=0.150  Sum_probs=130.8

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccC---ChhHHHHHHHHHHHhCCC-CH----HHHH----
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTL---PWNSLMDRMMKELHSQGK-TV----EDIA----   64 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~----~~~~----   64 (265)
                      |+++|+|||||||+|+...     ..++.++|.+....+.+...   +.........   ..... ..    +.+.    
T Consensus        11 ~~k~viFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   87 (229)
T PRK13226         11 FPRAVLFDLDGTLLDSAPDMLATVNAMLAARGRAPITLAQLRPVVSKGARAMLAVAF---PELDAAARDALIPEFLQRYE   87 (229)
T ss_pred             cCCEEEEcCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhhhHHHHHHHHHh---ccCChHHHHHHHHHHHHHHH
Confidence            3589999999999999642     55666666642211111111   1111111100   00000 00    1111    


Q ss_pred             HH-hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617           65 NC-LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        65 ~~-~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      .. .....++||+.++|++|+++|++++|+||+....+...++.+|+..+|+.+++.+              .....|| 
T Consensus        88 ~~~~~~~~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~--------------~~~~~KP-  152 (229)
T PRK13226         88 ALIGTQSQLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCAVLIGGD--------------TLAERKP-  152 (229)
T ss_pred             HhhhhcCeeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcccEEEecC--------------cCCCCCC-
Confidence            11 1246789999999999999999999999999999999999999999998877741              1112356 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchh-hhhhcCCCeeeEEEEeCCC
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLW-DRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  222 (265)
                                +|..+.++++++|++|+++++|||+.+|+.+|+++|...+++. +|+... .....  ..++..+   ++
T Consensus       153 ----------~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~-~g~~~~~~~~~~--~~~~~~i---~~  216 (229)
T PRK13226        153 ----------HPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAAL-WGYRLHDDDPLA--WQADVLV---EQ  216 (229)
T ss_pred             ----------CHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEe-ecCCCCCcChhh--cCCCeee---CC
Confidence                      8999999999999999999999999999999999888766654 444321 11111  1234555   99


Q ss_pred             HHHHHHHH
Q 044617          223 AEELKKIL  230 (265)
Q Consensus       223 ~~el~~~l  230 (265)
                      +.||.+.+
T Consensus       217 ~~el~~~~  224 (229)
T PRK13226        217 PQLLWNPA  224 (229)
T ss_pred             HHHHHHHh
Confidence            99998765

>PRK13478 phosphonoacetaldehyde hydrolase; Provisional

Probab=99.91  E-value=5.5e-23  Score=172.84  Aligned_cols=139  Identities=7%  Similarity=0.005  Sum_probs=107.1

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc-ceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF-SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f-~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++|+.|+++|++++|+||+....+..+++.+++..+| +.+++.+              .....||     
T Consensus        99 ~~~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i~~~~--------------~~~~~KP-----  159 (267)
T PRK13478         99 YATPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHVVTTD--------------DVPAGRP-----  159 (267)
T ss_pred             cCCCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEEEcCC--------------cCCCCCC-----
Confidence            4678999999999999999999999999999999999998887774 6777641              1122356     


Q ss_pred             cCCCCchHHHHHHHHHhcCCC-CceEEEEcCCCCCcccccCCCCCCeeeecCCCch-----------------------h
Q 044617          148 CPSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPL-----------------------W  203 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~-----------------------~  203 (265)
                            +|..+..+++++|+. +++++||||+.+|+.+|+++|...+++.. |+..                       .
T Consensus       160 ------~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (267)
T PRK13478        160 ------YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVIL-SGNELGLSEEEYQALSAAELAARRERAR  232 (267)
T ss_pred             ------ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEcc-CcccccCCHHHHHhcCHHHHHHHHHHHH
Confidence                  899999999999986 69999999999999999998887666654 4431                       1


Q ss_pred             hhhhcCCCeeeEEEEeCCCHHHHHHHHHHHHHhhc
Q 044617          204 DRICSNPMLIKAKVHEWSSAEELKKILLHLIGAIS  238 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~  238 (265)
                      ..+.+.  .++..+   +++.||.++|..+..+..
T Consensus       233 ~~l~~~--~a~~vi---~~~~~l~~~l~~~~~~~~  262 (267)
T PRK13478        233 ARLRAA--GAHYVI---DTIADLPAVIADIEARLA  262 (267)
T ss_pred             HHHHHc--CCCeeh---hhHHHHHHHHHHHHHHHh
Confidence            222221  234445   899999988876665543

>PRK13225 phosphoglycolate phosphatase; Provisional

Probab=99.91  E-value=9.9e-24  Score=176.99  Aligned_cols=195  Identities=19%  Similarity=0.285  Sum_probs=134.1

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHcc-CChhHHHHHHHHHHHhCCCC-----------HHHHH
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRST-LPWNSLMDRMMKELHSQGKT-----------VEDIA   64 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~   64 (265)
                      ++++|+|||||||+||...     ..+++.+|.+....+.+.. .++.  .......+   +..           .+.+.
T Consensus        61 ~~k~vIFDlDGTLiDS~~~~~~a~~~~~~~~G~~~~~~~~~~~~~g~~--~~~i~~~~---~~~~~~~~~~~~~~~~~~~  135 (273)
T PRK13225         61 TLQAIIFDFDGTLVDSLPTVVAIANAHAPDFGYDPIDERDYAQLRQWS--SRTIVRRA---GLSPWQQARLLQRVQRQLG  135 (273)
T ss_pred             hcCEEEECCcCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCcc--HHHHHHHc---CCCHHHHHHHHHHHHHHHH
Confidence            3689999999999999642     5566666664221111111 1110  00000100   111           01112


Q ss_pred             HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           65 NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        65 ~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      .......++||+.++|+.|+++|++++|+||+....+...++++|+.++|+.+++..            +.         
T Consensus       136 ~~~~~~~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~vi~~~------------~~---------  194 (273)
T PRK13225        136 DCLPALQLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSVVQAGT------------PI---------  194 (273)
T ss_pred             hhcccCCcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEEEEecC------------CC---------
Confidence            223456889999999999999999999999999999999999999999998877631            01         


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                             ..|+..+..++++++++|+++++|||+.+|+.+|+++|...+++. +|+.....+...  .++..+   +++.
T Consensus       195 -------~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~-~g~~~~~~l~~~--~ad~~i---~~~~  261 (273)
T PRK13225        195 -------LSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVT-WGFNDRQSLVAA--CPDWLL---ETPS  261 (273)
T ss_pred             -------CCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEe-cCCCCHHHHHHC--CCCEEE---CCHH
Confidence                   126788999999999999999999999999999999887665554 444433222211  234555   9999


Q ss_pred             HHHHHHHHHHH
Q 044617          225 ELKKILLHLIG  235 (265)
Q Consensus       225 el~~~l~~~~~  235 (265)
                      ||..++.+++.
T Consensus       262 eL~~~~~~~~~  272 (273)
T PRK13225        262 DLLQAVTQLMR  272 (273)
T ss_pred             HHHHHHHHHhc
Confidence            99998887753

>PLN02770 haloacid dehalogenase-like hydrolase family protein

Probab=99.91  E-value=2.4e-23  Score=173.12  Aligned_cols=192  Identities=11%  Similarity=0.006  Sum_probs=129.0

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCch----HHHHHHH---ccCChhHHHHHHHHHHHhCCCC-----HHHHH
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLT----HLFNQLR---STLPWNSLMDRMMKELHSQGKT-----VEDIA   64 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-----~~~~~   64 (265)
                      ++++|+|||||||+|+...     ..++++++.+    .......   ....+......+..........     ...+.
T Consensus        21 ~~k~viFDlDGTLiDs~~~~~~a~~~~~~~~g~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~  100 (248)
T PLN02770         21 PLEAVLFDVDGTLCDSDPLHYYAFREMLQEINFNGGVPITEEFFVENIAGKHNEDIALGLFPDDLERGLKFTDDKEALFR  100 (248)
T ss_pred             ccCEEEEcCCCccCcCHHHHHHHHHHHHHHhccccCCCCCHHHHHHHcCCCCHHHHHHHHcCcchhhHHHHHHHHHHHHH
Confidence            3689999999999999752     5556666432    1111111   1112222222111100000000     01111


Q ss_pred             HHh-cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617           65 NCL-RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        65 ~~~-~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      ... ....++||+.++|++|+++|++++|+||+....+...++++|+.++|+.+++.+              .....|| 
T Consensus       101 ~~~~~~~~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~iv~~~--------------~~~~~KP-  165 (248)
T PLN02770        101 KLASEQLKPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQAVIIGS--------------ECEHAKP-  165 (248)
T ss_pred             HHHHhcCCcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcEEEecC--------------cCCCCCC-
Confidence            211 357889999999999999999999999999999999999999999999988852              1112356 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCH
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSA  223 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (265)
                                +|+.+..+++++|++|+++++|||+.+|+++|+++|...+++. +++....+...   .++..+   +++
T Consensus       166 ----------~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~-~g~~~~~l~~~---~a~~vi---~~~  228 (248)
T PLN02770        166 ----------HPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLT-TRNPESLLMEA---KPTFLI---KDY  228 (248)
T ss_pred             ----------ChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEe-CCCCHHHHhhc---CCCEEe---ccc
Confidence                      8999999999999999999999999999999999887766554 44443332221   234555   777


Q ss_pred             HH
Q 044617          224 EE  225 (265)
Q Consensus       224 ~e  225 (265)
                      .|
T Consensus       229 ~e  230 (248)
T PLN02770        229 ED  230 (248)
T ss_pred             hh
Confidence            77

>PRK10826 2-deoxyglucose-6-phosphatase; Provisional

Probab=99.90  E-value=7.5e-23  Score=167.48  Aligned_cols=195  Identities=18%  Similarity=0.197  Sum_probs=129.9

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchHHH-HHHHccCC--hhHHHHHHHHHHHhCCCCHHH--------HH-
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLF-NQLRSTLP--WNSLMDRMMKELHSQGKTVED--------IA-   64 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--------~~-   64 (265)
                      ++++|+||+||||+|+...     ..++...|.+... ..+....+  .......+.......+...+.        +. 
T Consensus         6 ~~k~iiFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (222)
T PRK10826          6 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRREELPDTLGLRIDQVVDLWYARQPWNGPSRQEVVQRIIARVIS   85 (222)
T ss_pred             cCcEEEEcCCCCCCcCHHHHHHHHHHHHHHCCCCCCHHHHHHHhhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence            4789999999999999653     3455666654222 11111111  111111111111101111111        11 


Q ss_pred             HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           65 NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        65 ~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      .......++||+.++|+.|+++|++++|+||+....+...++.+++..+|+.+++.+              .....||  
T Consensus        86 ~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp--  149 (222)
T PRK10826         86 LIEETRPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDALASAE--------------KLPYSKP--  149 (222)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEEEEcc--------------cCCCCCC--
Confidence            112356899999999999999999999999999999999999999999999988852              1122355  


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                               ++..++.+++++|++|+++++|||+.+|+.+|+++|...+++...... .....  . .++..+   +++.
T Consensus       150 ---------~~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~-~~~~~--~-~~~~~~---~~~~  213 (222)
T PRK10826        150 ---------HPEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQ-NDPRW--A-LADVKL---ESLT  213 (222)
T ss_pred             ---------CHHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccC-chhhh--h-hhheec---cCHH
Confidence                     889999999999999999999999999999999988866666544211 11111  1 123444   8888


Q ss_pred             HHHH
Q 044617          225 ELKK  228 (265)
Q Consensus       225 el~~  228 (265)
                      ||..
T Consensus       214 dl~~  217 (222)
T PRK10826        214 ELTA  217 (222)
T ss_pred             HHhh
Confidence            8754

>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase

Probab=99.90  E-value=1.4e-22  Score=169.06  Aligned_cols=106  Identities=9%  Similarity=-0.017  Sum_probs=90.9

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc-ceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF-SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f-~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++|++|+++|++++|+||+....++.+++++|+..+| +.+++.+              .....||     
T Consensus        97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~ii~~~--------------~~~~~KP-----  157 (253)
T TIGR01422        97 YSSPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYNVTTD--------------DVPAGRP-----  157 (253)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceEEccc--------------cCCCCCC-----
Confidence            4688999999999999999999999999999999999999999886 7777742              1122356     


Q ss_pred             cCCCCchHHHHHHHHHhcCCC-CceEEEEcCCCCCcccccCCCCCCeeeecCCC
Q 044617          148 CPSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNY  200 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~  200 (265)
                            +|+.+..+++++|+. |+++++|||+.+|+.+|+++|...+++. +|+
T Consensus       158 ------~p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~i~v~-~g~  204 (253)
T TIGR01422       158 ------APWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWTVGLI-LSS  204 (253)
T ss_pred             ------CHHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeEEEEe-cCC
Confidence                  899999999999995 9999999999999999999888766665 444

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.

>PRK09449 dUMP phosphatase; Provisional

Probab=99.90  E-value=2e-22  Score=165.11  Aligned_cols=129  Identities=14%  Similarity=0.149  Sum_probs=102.5

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|++|+ +|++++|+||+....+...++++|+..+|+.+++..              .....||      
T Consensus        93 ~~~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~--------------~~~~~KP------  151 (224)
T PRK09449         93 ICTPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDLLVISE--------------QVGVAKP------  151 (224)
T ss_pred             cCccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCEEEEEC--------------ccCCCCC------
Confidence            4678999999999999 579999999999999999999999999999988751              2223466      


Q ss_pred             CCCCchHHHHHHHHHhcCCC-CceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                           ++.++..+++++|+. ++++++|||+. +|+.+|+++|...+++..++.....     ...++..+   +++.||
T Consensus       152 -----~p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~-----~~~~~~~i---~~~~el  218 (224)
T PRK09449        152 -----DVAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPE-----GIAPTYQV---SSLSEL  218 (224)
T ss_pred             -----CHHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCC-----CCCCeEEE---CCHHHH
Confidence                 899999999999975 58999999998 7999999989887777654432111     11234455   899999


Q ss_pred             HHHHH
Q 044617          227 KKILL  231 (265)
Q Consensus       227 ~~~l~  231 (265)
                      .++|+
T Consensus       219 ~~~l~  223 (224)
T PRK09449        219 EQLLC  223 (224)
T ss_pred             HHHHh
Confidence            88764

>PRK11587 putative phosphatase; Provisional

Probab=99.90  E-value=1.2e-22  Score=165.89  Aligned_cols=165  Identities=13%  Similarity=0.052  Sum_probs=115.8

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH-HHHHHccCChhHHHHHHHHHHHhCCCCH----HHHH------
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL-FNQLRSTLPWNSLMDRMMKELHSQGKTV----EDIA------   64 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~------   64 (265)
                      |++++|+|||||||+|+...     ..+++++|.+.. ....+...........+..     +...    +.+.      
T Consensus         1 M~~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~   75 (218)
T PRK11587          1 MRCKGFLFDLDGTLVDSLPAVERAWSNWADRHGIAPDEVLNFIHGKQAITSLRHFMA-----GASEAEIQAEFTRLEQIE   75 (218)
T ss_pred             CCCCEEEEcCCCCcCcCHHHHHHHHHHHHHHcCCCHHHHHHHHcCCCHHHHHHHHhc-----cCCcHHHHHHHHHHHHHH
Confidence            88999999999999999642     566777777532 1111111112111111110     0110    1111      


Q ss_pred             -HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617           65 -NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        65 -~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                       .......++||+.++|+.|+++|++++|+||+....+...++..++ .+|+.+++.+              .....|| 
T Consensus        76 ~~~~~~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l-~~~~~i~~~~--------------~~~~~KP-  139 (218)
T PRK11587         76 ATDTEGITALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGL-PAPEVFVTAE--------------RVKRGKP-  139 (218)
T ss_pred             HhhhcCceeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCC-CCccEEEEHH--------------HhcCCCC-
Confidence             1123567899999999999999999999999988888888888888 4566666641              1112356 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                                +|..+..+++++|+.|+++++|||+.+|+++|+++|...+++.
T Consensus       140 ----------~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~  182 (218)
T PRK11587        140 ----------EPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN  182 (218)
T ss_pred             ----------CcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC
Confidence                      8999999999999999999999999999999999888666664

>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein

Probab=99.90  E-value=5.8e-23  Score=166.14  Aligned_cols=133  Identities=9%  Similarity=0.046  Sum_probs=106.0

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ....++||+.++|++|+++|++++|+||+....+...++++|+.++|+.+++.+              .....||     
T Consensus        72 ~~~~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~~~~--------------~~~~~KP-----  132 (205)
T TIGR01454        72 GEVEVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVIGSD--------------EVPRPKP-----  132 (205)
T ss_pred             cccccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEEecC--------------cCCCCCC-----
Confidence            457889999999999999999999999999999999999999999999888752              1112356     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                            ++..+..+++++|+++++++||||+.+|+.+|+++|...+.+ .||+.....+...  .++..+   +++.||.
T Consensus       133 ------~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~-~~g~~~~~~l~~~--~~~~~~---~~~~~l~  200 (205)
T TIGR01454       133 ------APDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAA-LWGEGDAGELLAA--RPDFLL---RKPQSLL  200 (205)
T ss_pred             ------ChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEE-EecCCChhhhhhc--CCCeee---CCHHHHH
Confidence                  899999999999999999999999999999999988765544 4555443333211  234445   8999987


Q ss_pred             HHHH
Q 044617          228 KILL  231 (265)
Q Consensus       228 ~~l~  231 (265)
                      .++.
T Consensus       201 ~~~~  204 (205)
T TIGR01454       201 ALCR  204 (205)
T ss_pred             HHhh
Confidence            7653

The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.

>PRK13222 phosphoglycolate phosphatase; Provisional

Probab=99.90  E-value=2.2e-22  Score=164.96  Aligned_cols=201  Identities=18%  Similarity=0.228  Sum_probs=133.5

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH-HHHHH--ccCChhHHHHHHHHHHHhCCCCHHHH-------HH
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL-FNQLR--STLPWNSLMDRMMKELHSQGKTVEDI-------AN   65 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~   65 (265)
                      |++++|+||+||||+|+...     ..+++.++.+.. ...+.  ................ ......+.+       ..
T Consensus         4 ~~~~~iiFD~DGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   82 (226)
T PRK13222          4 MDIRAVAFDLDGTLVDSAPDLAAAVNAALAALGLPPAGEERVRTWVGNGADVLVERALTWA-GREPDEELLEKLRELFDR   82 (226)
T ss_pred             CcCcEEEEcCCcccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHHhCccHHHHHHHHHhhc-cCCccHHHHHHHHHHHHH
Confidence            35899999999999998542     445555665421 11111  1111222222211110 011121111       11


Q ss_pred             Hh-----cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeecccccc
Q 044617           66 CL-----RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTL  140 (265)
Q Consensus        66 ~~-----~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~  140 (265)
                      .+     ....++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++.+              .....
T Consensus        83 ~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~  148 (226)
T PRK13222         83 HYAENVAGGSRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSVVIGGD--------------SLPNK  148 (226)
T ss_pred             HHHHhccccCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccEEEcCC--------------CCCCC
Confidence            11     246789999999999999999999999999999999999999998998877741              11123


Q ss_pred             CCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeC
Q 044617          141 SHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEW  220 (265)
Q Consensus       141 kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (265)
                      ||           ++.+++.++++++++++++++|||+.+|+.+|+++|...+++.. |+........  ..++..+   
T Consensus       149 kp-----------~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~-g~~~~~~~~~--~~~~~~i---  211 (226)
T PRK13222        149 KP-----------DPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTY-GYNYGEPIAL--SEPDVVI---  211 (226)
T ss_pred             Cc-----------ChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECc-CCCCccchhh--cCCCEEE---
Confidence            45           78999999999999999999999999999999998887666653 3332111211  1233455   


Q ss_pred             CCHHHHHHHHHHH
Q 044617          221 SSAEELKKILLHL  233 (265)
Q Consensus       221 ~~~~el~~~l~~~  233 (265)
                      +++.||...|.+-
T Consensus       212 ~~~~~l~~~l~~~  224 (226)
T PRK13222        212 DHFAELLPLLGLA  224 (226)
T ss_pred             CCHHHHHHHHHHh
Confidence            9999998887653

>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic

Probab=99.90  E-value=6.8e-23  Score=166.60  Aligned_cols=130  Identities=18%  Similarity=0.165  Sum_probs=102.9

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|+.|+++|++++|+||+....++..++++|+..+|+.+++.+.              ....||      
T Consensus        83 ~~~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~~~~~~--------------~~~~Kp------  142 (213)
T TIGR01449        83 LTSVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSVLIGGDS--------------LAQRKP------  142 (213)
T ss_pred             cCccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcEEEecCC--------------CCCCCC------
Confidence            367899999999999999999999999999999999999999999998887521              112355      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKK  228 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~  228 (265)
                           +|..+.++++++|++++++++|||+.+|+.+|+++|...+++. +|+.....+...  .++..+   +++.||..
T Consensus       143 -----~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~-~g~~~~~~l~~~--~a~~~i---~~~~~l~~  211 (213)
T TIGR01449       143 -----HPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLT-YGYRYGEAIDLL--PPDVLY---DSLNELPP  211 (213)
T ss_pred             -----ChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEc-cCCCCCcchhhc--CCCeEe---CCHHHHHh
Confidence                 8999999999999999999999999999999999887666554 444322222111  233445   88988876


Q ss_pred             H
Q 044617          229 I  229 (265)
Q Consensus       229 ~  229 (265)
                      +
T Consensus       212 ~  212 (213)
T TIGR01449       212 L  212 (213)
T ss_pred             h
Confidence            4

This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).

>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed

Probab=99.89  E-value=2.2e-22  Score=164.35  Aligned_cols=209  Identities=18%  Similarity=0.276  Sum_probs=135.4

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchH---HHHHHHc-cCChhHHHHHHHHHHHhCCCCHHHHHHH-hcCCCCChh
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTH---LFNQLRS-TLPWNSLMDRMMKELHSQGKTVEDIANC-LRQCPLDSH   75 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g   75 (265)
                      ||.++|+|||||||++++....+++.++...   ....+.. ...|...+......+..  ...+++.+. .....++||
T Consensus         1 ~~~~~vifDfDgTi~~~d~~~~~~~~~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~l~pG   78 (219)
T PRK09552          1 MMSIQIFCDFDGTITNNDNIIAIMKKFAPPEWEELKDDILSQELSIQEGVGQMFQLLPS--NLKEEIIQFLLETAEIREG   78 (219)
T ss_pred             CCCcEEEEcCCCCCCcchhhHHHHHHhCHHHHHHHHHHHHhCCcCHHHHHHHHHHhCCC--CchHHHHHHHHhCCCcCcC
Confidence            7888999999999999998776666665432   1111221 22455555554444322  122444443 356889999


Q ss_pred             HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc-c--CCCC
Q 044617           76 VAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL-C--PSNL  152 (265)
Q Consensus        76 ~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~-~--~~~~  152 (265)
                      +.++|+.|+++|++++|+|++...++..+++++ +..  +.++++...++++ ....       .||+.+.. +  ..+.
T Consensus        79 ~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~-~~~~-------~kp~p~~~~~~~~~~~  147 (219)
T PRK09552         79 FHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGE-YITI-------TWPHPCDEHCQNHCGC  147 (219)
T ss_pred             HHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCC-eeEE-------eccCCccccccccCCC
Confidence            999999999999999999999999999999998 643  3567665545422 2221       12322110 0  1134


Q ss_pred             chHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHH
Q 044617          153 CKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLH  232 (265)
Q Consensus       153 ~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~  232 (265)
                      +|+.    ++++++..+.+++|||||.+|+++|++   +++.+++.  .......+..    ..+..|++|.||.+.|++
T Consensus       148 ~K~~----~l~~~~~~~~~~i~iGDs~~Di~aa~~---Ag~~~a~~--~l~~~~~~~~----~~~~~~~~f~ei~~~l~~  214 (219)
T PRK09552        148 CKPS----LIRKLSDTNDFHIVIGDSITDLEAAKQ---ADKVFARD--FLITKCEELG----IPYTPFETFHDVQTELKH  214 (219)
T ss_pred             chHH----HHHHhccCCCCEEEEeCCHHHHHHHHH---CCcceeHH--HHHHHHHHcC----CCccccCCHHHHHHHHHH
Confidence            5775    445567788899999999999999954   55566643  1112111211    234456999999999887


Q ss_pred             HHH
Q 044617          233 LIG  235 (265)
Q Consensus       233 ~~~  235 (265)
                      +.+
T Consensus       215 ~~~  217 (219)
T PRK09552        215 LLE  217 (219)
T ss_pred             Hhc
Confidence            653

>TIGR00338 serB phosphoserine phosphatase SerB

Probab=99.89  E-value=3e-22  Score=163.59  Aligned_cols=172  Identities=20%  Similarity=0.298  Sum_probs=123.3

Q ss_pred             CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHc-----cCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhH
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRS-----TLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHV   76 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   76 (265)
                      |+++|+|||||||++++....+++.+|.+.....+..     ...+..........+  .+...+.+.......+++||+
T Consensus        13 ~~k~iiFD~DGTL~~~~~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~   90 (219)
T TIGR00338        13 SKKLVVFDMDSTLINAETIDEIAKIAGVEEEVSEITERAMRGELDFKASLRERVALL--KGLPVELLKEVRENLPLTEGA   90 (219)
T ss_pred             cCCEEEEeCcccCCCchHHHHHHHHhCCHHHHHHHHHHHHcCCCCHHHHHHHHHHHh--CCCCHHHHHHHHhcCCcCCCH
Confidence            4789999999999999888888888887644332221     123333333322222  344556666666778899999


Q ss_pred             HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHH
Q 044617           77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGF  156 (265)
Q Consensus        77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~  156 (265)
                      .++|+.|+++|++++|+||+....+..+++.+|+..+|...+.    ++ ++.++......    +      ..+.+|+.
T Consensus        91 ~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~----~~-~~~~~~~~~~~----~------~~~~~k~~  155 (219)
T TIGR00338        91 EELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLE----VE-DGKLTGLVEGP----I------VDASYKGK  155 (219)
T ss_pred             HHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEE----EE-CCEEEEEecCc----c------cCCcccHH
Confidence            9999999999999999999999999999999998765543222    22 22222211110    0      00123899


Q ss_pred             HHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                      .++.+++++++++++++||||+.+|+.+|+++|.
T Consensus       156 ~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~  189 (219)
T TIGR00338       156 TLLILLRKEGISPENTVAVGDGANDLSMIKAAGL  189 (219)
T ss_pred             HHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCC
Confidence            9999999999999999999999999999977554

Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.

>PLN02575 haloacid dehalogenase-like hydrolase

Probab=99.89  E-value=2.2e-22  Score=173.83  Aligned_cols=199  Identities=12%  Similarity=0.083  Sum_probs=133.5

Q ss_pred             ceEEEEecCCCCCCCCc-h-----HHHHHHhCchHHHHHHHcc---CChhHHHHHHHHHHHhCCCC--------HHHHHH
Q 044617            3 DVVVVFDFDRTLIDDDS-D-----NWVVTQMGLTHLFNQLRST---LPWNSLMDRMMKELHSQGKT--------VEDIAN   65 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~-~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--------~~~~~~   65 (265)
                      .++|||||||||+|+.. .     ..+++..|.+....+....   .........+.... .....        .+.+.+
T Consensus       131 ~~~VIFDlDGTLIDS~~~i~~~a~~~l~~e~G~~~~~~e~~~~~~G~~~~~~l~~ll~~~-~~~~~~e~l~~~~~~~y~~  209 (381)
T PLN02575        131 WLGAIFEWEGVIIEDNPDLENQAWLTLAQEEGKSPPPAFILRRVEGMKNEQAISEVLCWS-RDPAELRRMATRKEEIYQA  209 (381)
T ss_pred             CCEEEEcCcCcceeCHHHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHhhcc-CCHHHHHHHHHHHHHHHHH
Confidence            57899999999999864 2     3345566665332222211   11122222211100 00000        011111


Q ss_pred             Hh-cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           66 CL-RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        66 ~~-~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      .. ....++||+.++|+.|+++|++++|+||+....++..++++|+..+|+.+++.+.              ....||  
T Consensus       210 ~~~~~~~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~Iv~sdd--------------v~~~KP--  273 (381)
T PLN02575        210 LQGGIYRLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVIVAAED--------------VYRGKP--  273 (381)
T ss_pred             HhccCCCcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEEEecCc--------------CCCCCC--
Confidence            11 2457899999999999999999999999999999999999999999999998521              112356  


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                               +|+++..+++++|+.|++|++|||+..|+++|+++|+..+++.. ++.... +.    .++..+   +++.
T Consensus       274 ---------~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~-~~~~~~-l~----~Ad~iI---~s~~  335 (381)
T PLN02575        274 ---------DPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVAS-KHPIYE-LG----AADLVV---RRLD  335 (381)
T ss_pred             ---------CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECC-CCChhH-hc----CCCEEE---CCHH
Confidence                     89999999999999999999999999999999998887666653 333222 11    133445   9999


Q ss_pred             HHHHHHHHHHHh
Q 044617          225 ELKKILLHLIGA  236 (265)
Q Consensus       225 el~~~l~~~~~~  236 (265)
                      ||.....+-+.+
T Consensus       336 EL~~~~l~~l~~  347 (381)
T PLN02575        336 ELSIVDLKNLAD  347 (381)
T ss_pred             HHHHHHHhhhhh
Confidence            984443343333

>PRK14988 GMP/IMP nucleotidase; Provisional

Probab=99.89  E-value=2.2e-22  Score=164.67  Aligned_cols=105  Identities=10%  Similarity=0.109  Sum_probs=91.0

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ....++||+.++|+.|+++|++++|+||+....+...++++|+..+|+.+++++              .....||     
T Consensus        90 ~~~~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~iv~s~--------------~~~~~KP-----  150 (224)
T PRK14988         90 PRAVLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTH--------------TFGYPKE-----  150 (224)
T ss_pred             ccCCcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCEEEEee--------------eCCCCCC-----
Confidence            457889999999999999999999999999999999999999999999988852              1122456     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                            +|..+..+++++|++|++|++|||+.+|+++|+++|+..++.+.
T Consensus       151 ------~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~  194 (224)
T PRK14988        151 ------DQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVT  194 (224)
T ss_pred             ------CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence                  89999999999999999999999999999999998886544333

>PRK13223 phosphoglycolate phosphatase; Provisional

Probab=99.89  E-value=3.1e-22  Score=168.37  Aligned_cols=199  Identities=15%  Similarity=0.169  Sum_probs=132.1

Q ss_pred             ceEEEEecCCCCCCCCc-----hHHHHHHhCchHH-HHHHHc--cCChhHHHHHHHH-HHHhCCCCHH-------HHHHH
Q 044617            3 DVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHL-FNQLRS--TLPWNSLMDRMMK-ELHSQGKTVE-------DIANC   66 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~   66 (265)
                      +++|+|||||||+|+..     ...+++++|.+.. ...+..  ..+.......... .+...+...+       .+.+.
T Consensus        13 ~k~viFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~   92 (272)
T PRK13223         13 PRLVMFDLDGTLVDSVPDLAAAVDRMLLELGRPPAGLEAVRHWVGNGAPVLVRRALAGSIDHDGVDDELAEQALALFMEA   92 (272)
T ss_pred             CCEEEEcCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhChhHHHHHHHHhcccccccCCCHHHHHHHHHHHHHH
Confidence            68999999999999954     3556667776521 111111  1111111111110 0000111111       11111


Q ss_pred             h----cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCC
Q 044617           67 L----RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        67 ~----~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                      +    ....++||+.++|+.|+++|++++|+||+....+...++++++..+|+.+++.+.              ....||
T Consensus        93 ~~~~~~~~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~i~~~d~--------------~~~~Kp  158 (272)
T PRK13223         93 YADSHELTVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRWIIGGDT--------------LPQKKP  158 (272)
T ss_pred             HHhcCcCCccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeEEEecCC--------------CCCCCC
Confidence            1    2356899999999999999999999999999999999999999999998887421              112345


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                                 ++..++.+++++|++++++++|||+.+|+.+|+++|...+++. +|+.....+...  .++..+   ++
T Consensus       159 -----------~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~-~G~~~~~~l~~~--~~~~vi---~~  221 (272)
T PRK13223        159 -----------DPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALS-YGYNHGRPIAEE--SPALVI---DD  221 (272)
T ss_pred             -----------CcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEe-cCCCCchhhhhc--CCCEEE---CC
Confidence                       8899999999999999999999999999999999887766655 444333222211  234445   88


Q ss_pred             HHHHHHHHHH
Q 044617          223 AEELKKILLH  232 (265)
Q Consensus       223 ~~el~~~l~~  232 (265)
                      +.||.+.+..
T Consensus       222 l~el~~~~~~  231 (272)
T PRK13223        222 LRALLPGCAD  231 (272)
T ss_pred             HHHHHHHHhc
Confidence            9998866553

>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253

Probab=99.89  E-value=5.4e-22  Score=162.22  Aligned_cols=105  Identities=13%  Similarity=0.128  Sum_probs=91.6

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++..              .....||      
T Consensus        92 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~~~~--------------~~~~~KP------  151 (221)
T TIGR02253        92 YLRVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVITSE--------------EEGVEKP------  151 (221)
T ss_pred             hCCCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEEEec--------------cCCCCCC------
Confidence            46889999999999999999999999999999999999999999999988741              1223456      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~  198 (265)
                           ++..+..+++++|++++++++|||+. +|+.+|+++|...+++...
T Consensus       152 -----~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~~~  197 (221)
T TIGR02253       152 -----HPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWINQG  197 (221)
T ss_pred             -----CHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEECCC
Confidence                 88999999999999999999999998 9999999988877666544

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).

>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]

Probab=99.88  E-value=5.5e-22  Score=161.86  Aligned_cols=172  Identities=16%  Similarity=0.125  Sum_probs=125.2

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCchHH---HHHHHccCChhHHHHHHHHHHHhC-CCCH--------HHHHH
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL---FNQLRSTLPWNSLMDRMMKELHSQ-GKTV--------EDIAN   65 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~   65 (265)
                      ++++||||||||+||...     ..+++++|+...   .........+... .......... +...        .....
T Consensus         2 ~~avIFD~DGvLvDse~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (221)
T COG0637           2 IKAVIFDMDGTLVDSEPLHARAWLEALKEYGIEISDEEIRELHGGGIARII-DLLRKLAAGEDPADLAELERLLYEAEAL   80 (221)
T ss_pred             CcEEEEcCCCCcCcchHHHHHHHHHHHHHcCCCCCHHHHHHHHCCChHHHH-HHHHHHhcCCcccCHHHHHHHHHHHHHh
Confidence            689999999999999764     556667776532   2222222212211 1111111100 0111        11112


Q ss_pred             HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                      ......+.||+.++|++|+++|++++++|++....+...++.+|+.++|+.+++..              .....||   
T Consensus        81 ~~~~~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~~v~~~--------------dv~~~KP---  143 (221)
T COG0637          81 ELEGLKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDVIVTAD--------------DVARGKP---  143 (221)
T ss_pred             hhcCCCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcchhccHH--------------HHhcCCC---
Confidence            33467899999999999999999999999999999999999999999999887752              1222367   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCc
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP  201 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~  201 (265)
                              .|+.+..+++++|++|++|+.|+|+.+++.+|+++|+..+++.. +++
T Consensus       144 --------~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~v~~-~~~  190 (221)
T COG0637         144 --------APDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVGVPA-GHD  190 (221)
T ss_pred             --------CCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEEecC-CCC
Confidence                    89999999999999999999999999999999999988888876 444

>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal

Probab=99.88  E-value=4.4e-21  Score=154.44  Aligned_cols=172  Identities=15%  Similarity=0.117  Sum_probs=117.7

Q ss_pred             ceEEEEecCCCCCCCCc-hHHHHHHhCchHHHHH---HHc--cCChhHHHHHHHHHHHh--CCCCHHHHHHHhcCCCCCh
Q 044617            3 DVVVVFDFDRTLIDDDS-DNWVVTQMGLTHLFNQ---LRS--TLPWNSLMDRMMKELHS--QGKTVEDIANCLRQCPLDS   74 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~-~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~   74 (265)
                      +|+|+|||||||++++. ..++...++.+.....   .+.  ...+.............  .....+.+...+....++|
T Consensus         4 ~k~viFD~DGTLid~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (201)
T TIGR01491         4 IKLIIFDLDGTLTDVMSSWEYLHRRLETCGLAKKNAELFFSGRISYEEWARLDASLWKRRSGRLRREEVEEIFKEISLRD   83 (201)
T ss_pred             ceEEEEeCCCCCcCCccHHHHHHHHhCchHHHHHHHHHHHcCCCCHHHHHHHHHHHHhhcccCCCHHHHHHHHHhCCCCc
Confidence            68999999999999765 3555555666532221   111  22333333222222211  1234555666677789999


Q ss_pred             hHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCch
Q 044617           75 HVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCK  154 (265)
Q Consensus        75 g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K  154 (265)
                      |+.++|+.|+++|++++|+||+....++.+++.+|+..+|...+.    .++.+...+.++..           ....+|
T Consensus        84 g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~----~~~~g~~~p~~~~~-----------~~~~~k  148 (201)
T TIGR01491        84 YAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELV----FDEKGFIQPDGIVR-----------VTFDNK  148 (201)
T ss_pred             cHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEE----EcCCCeEecceeeE-----------EccccH
Confidence            999999999999999999999999999999999998765544333    23334333211110           001238


Q ss_pred             HHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          155 GFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       155 ~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                      +..++++++++|+++++++||||+.+|+.+|+.+|
T Consensus       149 ~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag  183 (201)
T TIGR01491       149 GEAVERLKRELNPSLTETVAVGDSKNDLPMFEVAD  183 (201)
T ss_pred             HHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcC
Confidence            88999999999999999999999999999996644

This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.

>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II

Probab=99.88  E-value=1.9e-21  Score=156.45  Aligned_cols=111  Identities=15%  Similarity=0.224  Sum_probs=96.5

Q ss_pred             HHHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617           64 ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        64 ~~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      .+.+....++||+.++|++|+++|++++|+||+....+...++.+|+..+|+.+++++              .....|| 
T Consensus        85 ~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s~--------------~~~~~KP-  149 (198)
T TIGR01428        85 AEAYLRLPPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAVLSAD--------------AVRAYKP-  149 (198)
T ss_pred             HHHHhcCCCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhheeEehh--------------hcCCCCC-
Confidence            3444567889999999999999999999999999999999999999999999998852              1122356 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN  199 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~  199 (265)
                                ++.++..+++++|++|+++++|||+.+|+.+|+++|+..+++.+.+
T Consensus       150 ----------~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i~v~r~~  195 (198)
T TIGR01428       150 ----------APQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTAWVNRPG  195 (198)
T ss_pred             ----------CHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEEEecCCC
Confidence                      7999999999999999999999999999999999998877777653

Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.

>PRK13582 thrH phosphoserine phosphatase; Provisional

Probab=99.87  E-value=6.1e-21  Score=154.22  Aligned_cols=201  Identities=16%  Similarity=0.151  Sum_probs=134.2

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKS   82 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~   82 (265)
                      +++|+|||||||++. ....+.+++|.+...........|...+..-...+...+.+.+.+........++||+.++|+.
T Consensus         1 ~~~v~FD~DGTL~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~~pg~~e~L~~   79 (205)
T PRK13582          1 MEIVCLDLEGVLVPE-IWIAFAEKTGIPELRATTRDIPDYDVLMKQRLDILDEHGLGLADIQEVIATLDPLPGAVEFLDW   79 (205)
T ss_pred             CeEEEEeCCCCChhh-HHHHHHHHcCChHHHHHhcCCCCHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCCHHHHHHH
Confidence            389999999999964 4456777888776433222234566666665566655567778888888888999999999999


Q ss_pred             HHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHHHH
Q 044617           83 AHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC  162 (265)
Q Consensus        83 l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~  162 (265)
                      |+++ ++++|+||+...+++.+++++|+..+|...+.    +++++.+.....    .+|         ..|...++   
T Consensus        80 L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~----~~~~~~i~~~~~----~~p---------~~k~~~l~---  138 (205)
T PRK13582         80 LRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLE----VDEDGMITGYDL----RQP---------DGKRQAVK---  138 (205)
T ss_pred             HHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEE----ECCCCeEECccc----ccc---------chHHHHHH---
Confidence            9999 99999999999999999999999877654333    222222211000    011         12444444   


Q ss_pred             HhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHHHh
Q 044617          163 TSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGA  236 (265)
Q Consensus       163 ~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~  236 (265)
                       +++..+++++|||||.+|+.++++++. ++.+.   ... ......+   ..  ..++++.||.++|.++..+
T Consensus       139 -~~~~~~~~~v~iGDs~~D~~~~~aa~~-~v~~~---~~~-~~~~~~~---~~--~~~~~~~el~~~l~~~~~~  201 (205)
T PRK13582        139 -ALKSLGYRVIAAGDSYNDTTMLGEADA-GILFR---PPA-NVIAEFP---QF--PAVHTYDELLAAIDKASAR  201 (205)
T ss_pred             -HHHHhCCeEEEEeCCHHHHHHHHhCCC-CEEEC---CCH-HHHHhCC---cc--cccCCHHHHHHHHHHHHhh
Confidence             334456899999999999999977553 45432   221 2122122   11  1249999999888877543

>PRK10563 6-phosphogluconate phosphatase; Provisional

Probab=99.87  E-value=7.2e-22  Score=161.57  Aligned_cols=168  Identities=14%  Similarity=0.175  Sum_probs=116.6

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHcc---CChhHHHHHHHHHHHhCCCCHHHHHH--------
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRST---LPWNSLMDRMMKELHSQGKTVEDIAN--------   65 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--------   65 (265)
                      ++++|+||+||||+|+...     ..++..+|.+....+.+..   .........+..... .....+.+..        
T Consensus         3 ~~~~viFD~DGTL~d~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   81 (221)
T PRK10563          3 QIEAVFFDCDGTLVDSEVICSRAYVTMFAEFGITLSLEEVFKRFKGVKLYEIIDIISKEHG-VTLAKAELEPVYRAEVAR   81 (221)
T ss_pred             CCCEEEECCCCCCCCChHHHHHHHHHHHHHcCCCCCHHHHHHHhcCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHH
Confidence            4799999999999999653     4455566654322222222   122222222222211 1122222221        


Q ss_pred             H-hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccc-eEEecCceecCCCceEEeeccccccCCC
Q 044617           66 C-LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFS-EIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        66 ~-~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~-~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      . .....++||+.++|+.|   +++++|+||+....+...++.+|+..+|+ .+++.              ......|| 
T Consensus        82 ~~~~~~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~~v~~~--------------~~~~~~KP-  143 (221)
T PRK10563         82 LFDSELEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPDKLFSG--------------YDIQRWKP-  143 (221)
T ss_pred             HHHccCCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcceEeeH--------------HhcCCCCC-
Confidence            1 13468899999999998   38999999999999999999999999996 45553              11123456 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                                +++.+..+++++|++|++|++|||+.+|+++|+++|...+.++.+
T Consensus       144 ----------~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~~~~~  188 (221)
T PRK10563        144 ----------DPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFYFCAD  188 (221)
T ss_pred             ----------ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEEECCC
Confidence                      899999999999999999999999999999999988766655443

>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase

Probab=99.87  E-value=2.1e-21  Score=154.34  Aligned_cols=163  Identities=14%  Similarity=0.176  Sum_probs=112.4

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCchHH--HHHHHccCChhHHHHHHHHHHHhCCCCHHHH-----------H
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL--FNQLRSTLPWNSLMDRMMKELHSQGKTVEDI-----------A   64 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~   64 (265)
                      +++|+||+||||+|+...     ..+++++|.+..  ................+.... ..+.+.+.+           .
T Consensus         1 ~~~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   79 (185)
T TIGR02009         1 YKAVIFDMDGVIVDTAPLHAQAWKHLADKYGIEFDKQYNTSLGGLSREDILRAILKLR-KPGLSLETIHQLAERKNELYR   79 (185)
T ss_pred             CCeEEEcCCCcccCChHHHHHHHHHHHHHcCCCCCHHHHHHcCCCCHHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHH
Confidence            478999999999999753     445666665421  111111111122222221111 002222211           1


Q ss_pred             HHh--cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCC
Q 044617           65 NCL--RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        65 ~~~--~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                      +.+  ....++||+.++|+.|+++|++++++||+  ..++..++.+|+..+|+.+++..              .....||
T Consensus        80 ~~~~~~~~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v~~~~--------------~~~~~kp  143 (185)
T TIGR02009        80 ELLRLTGAEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAIVDAD--------------EVKEGKP  143 (185)
T ss_pred             HHHhccCCCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEeeehh--------------hCCCCCC
Confidence            222  23688999999999999999999999998  66888999999999999988751              1112355


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCe
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDF  193 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~  193 (265)
                                 ++..+.+++++++++++++++|||+.+|+++|+++|...+
T Consensus       144 -----------~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~i  183 (185)
T TIGR02009       144 -----------HPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFAV  183 (185)
T ss_pred             -----------ChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeEe
Confidence                       7899999999999999999999999999999988776443

All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).

>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254

Probab=99.86  E-value=1.1e-20  Score=154.78  Aligned_cols=128  Identities=16%  Similarity=0.125  Sum_probs=102.2

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|++|+++ ++++|+||+....+...++.+++..+|+.+++..              .....||      
T Consensus        95 ~~~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~~~--------------~~~~~KP------  153 (224)
T TIGR02254        95 GHQLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFVSE--------------DAGIQKP------  153 (224)
T ss_pred             cCeeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEEcC--------------ccCCCCC------
Confidence            467899999999999999 9999999999999999999999999999998852              1123456      


Q ss_pred             CCCCchHHHHHHHHHhc-CCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          149 PSNLCKGFVLDHVCTSF-GCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~-gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                           ++.++..+++++ |++|+++++|||+. +|+.+|+++|...+++..++.+..  ..   ..++..+   +++.||
T Consensus       154 -----~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~--~~---~~~~~~~---~~~~el  220 (224)
T TIGR02254       154 -----DKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNP--DD---IIPTYEI---RSLEEL  220 (224)
T ss_pred             -----CHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCC--CC---CCCceEE---CCHHHH
Confidence                 899999999999 99999999999998 899999998887776654322211  11   1233445   889998


Q ss_pred             HHHH
Q 044617          227 KKIL  230 (265)
Q Consensus       227 ~~~l  230 (265)
                      .++|
T Consensus       221 ~~~~  224 (224)
T TIGR02254       221 YEIL  224 (224)
T ss_pred             HhhC
Confidence            8753

This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.

>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase

Probab=99.86  E-value=2.4e-20  Score=151.77  Aligned_cols=205  Identities=18%  Similarity=0.261  Sum_probs=136.4

Q ss_pred             EEEecCCCCCCCCchHHHHHHhCchHH---HHHHHcc-CChhHHHHHHHHHHHhCCCCHHHHHHHh-cCCCCChhHHHHH
Q 044617            6 VVFDFDRTLIDDDSDNWVVTQMGLTHL---FNQLRST-LPWNSLMDRMMKELHSQGKTVEDIANCL-RQCPLDSHVAAAI   80 (265)
Q Consensus         6 iifD~DGTL~ds~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~e~l   80 (265)
                      |+|||||||++.++...+++.++.+..   ...+... ..|...+......+....  .+++.+++ ....++||+.+++
T Consensus         2 ~~fDFDgTit~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~e~~~~~~~~~~~~~--~~~~~~~~~~~~~l~pg~~e~l   79 (214)
T TIGR03333         2 IICDFDGTITNNDNIISIMKQFAPPEWEALKDGVLSKTLSIQEGVGRMFGLLPSSL--KEEITSFVLETAEIREGFREFV   79 (214)
T ss_pred             EEeccCCCCCcchhHHHHHHHhCcHHHHHHHHHHHcCCccHHHHHHHHHhhCCCch--HHHHHHHHHhcCcccccHHHHH
Confidence            799999999999998888877765432   2233332 346666655444332221  23454433 4578999999999


Q ss_pred             HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEE-eeccccccCCCcccccCCCCchHHHHH
Q 044617           81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRI-LPYHDSTLSHHGCNLCPSNLCKGFVLD  159 (265)
Q Consensus        81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~-~~~~~~~~kp~~~~~~~~~~~K~~~i~  159 (265)
                      +.|+++|++++|+|++...+++.+++.++.   .+.+++++..+++ +.+.. .|++....++.     ..|.+|..+++
T Consensus        80 ~~l~~~g~~~~IvS~~~~~~i~~il~~~~~---~~~i~~n~~~~~~-~~~~~~~p~~~~~~~~~-----~cg~~K~~~l~  150 (214)
T TIGR03333        80 AFINEHGIPFYVISGGMDFFVYPLLEGIVE---KDRIYCNEADFSN-EYIHIDWPHPCDGTCQN-----QCGCCKPSLIR  150 (214)
T ss_pred             HHHHHCCCeEEEECCCcHHHHHHHHHhhCC---cccEEeceeEeeC-CeeEEeCCCCCcccccc-----CCCCCHHHHHH
Confidence            999999999999999999999999998754   2457777666653 33332 12221111111     12667998887


Q ss_pred             HHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHH
Q 044617          160 HVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLI  234 (265)
Q Consensus       160 ~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~  234 (265)
                      .+..    .+++++|||||.+|+++|+   .+++++++. ... .. ++...   ..+..|++|.|+.+.|+++.
T Consensus       151 ~~~~----~~~~~i~iGDg~~D~~~a~---~Ad~~~ar~-~l~-~~-~~~~~---~~~~~~~~f~di~~~l~~~~  212 (214)
T TIGR03333       151 KLSE----PNDYHIVIGDSVTDVEAAK---QSDLCFARD-YLL-NE-CEELG---LNHAPFQDFYDVRKELENVK  212 (214)
T ss_pred             HHhh----cCCcEEEEeCCHHHHHHHH---hCCeeEehH-HHH-HH-HHHcC---CCccCcCCHHHHHHHHHHHh
Confidence            6653    5678999999999999994   567788875 211 11 12121   23455799999999998664

Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.

>PRK11133 serB phosphoserine phosphatase; Provisional

Probab=99.85  E-value=3.5e-20  Score=158.40  Aligned_cols=201  Identities=13%  Similarity=0.155  Sum_probs=133.7

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHc---c--CChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRS---T--LPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVA   77 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   77 (265)
                      +++|+|||||||+..+....+++.+|.......+..   .  ..+.........  ...+...+.+.......+++||+.
T Consensus       110 ~~LvvfDmDGTLI~~e~i~eia~~~g~~~~v~~it~~~m~Geldf~esl~~rv~--~l~g~~~~il~~v~~~l~l~pGa~  187 (322)
T PRK11133        110 PGLLVMDMDSTAIQIECIDEIAKLAGTGEEVAEVTERAMRGELDFEASLRQRVA--TLKGADANILQQVRENLPLMPGLT  187 (322)
T ss_pred             CCEEEEECCCCCcchHHHHHHHHHhCCchHHHHHHHHHHcCCcCHHHHHHHHHH--HhCCCCHHHHHHHHHhCCCChhHH
Confidence            589999999999988877888888887655433322   1  233332222111  123445455555566789999999


Q ss_pred             HHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeecc-ccccCCCcccccCCCCchHH
Q 044617           78 AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYH-DSTLSHHGCNLCPSNLCKGF  156 (265)
Q Consensus        78 e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~-~~~~kp~~~~~~~~~~~K~~  156 (265)
                      ++|+.|+++|++++|+|++...+++.+++++|+.    .++++...+. +|.++..... ...           +.+|++
T Consensus       188 elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld----~~~an~lei~-dg~ltg~v~g~iv~-----------~k~K~~  251 (322)
T PRK11133        188 ELVLKLQALGWKVAIASGGFTYFADYLRDKLRLD----AAVANELEIM-DGKLTGNVLGDIVD-----------AQYKAD  251 (322)
T ss_pred             HHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCC----eEEEeEEEEE-CCEEEeEecCccCC-----------cccHHH
Confidence            9999999999999999999999999999999975    3444433332 3433321111 011           234999


Q ss_pred             HHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHH
Q 044617          157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILL  231 (265)
Q Consensus       157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~  231 (265)
                      .++++++++|++++++++|||+.||+.|++.+|   +.++....   ..+++   .++..+ .+.+...++-+|.
T Consensus       252 ~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AG---lgiA~nAk---p~Vk~---~Ad~~i-~~~~l~~~l~~~~  316 (322)
T PRK11133        252 TLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAG---LGIAYHAK---PKVNE---QAQVTI-RHADLMGVLCILS  316 (322)
T ss_pred             HHHHHHHHcCCChhhEEEEECCHHHHHHHHHCC---CeEEeCCC---HHHHh---hCCEEe-cCcCHHHHHHHhc
Confidence            999999999999999999999999999996544   44443221   22332   233433 2355666665553

>TIGR01990 bPGM beta-phosphoglucomutase

Probab=99.85  E-value=4.4e-21  Score=152.49  Aligned_cols=163  Identities=12%  Similarity=0.162  Sum_probs=110.4

Q ss_pred             EEEEecCCCCCCCCch-----HHHHHHhCchHHHH--HHHccCChhHHHHHHHHHHHhCCCCHHH-----------HHHH
Q 044617            5 VVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFN--QLRSTLPWNSLMDRMMKELHSQGKTVED-----------IANC   66 (265)
Q Consensus         5 ~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~   66 (265)
                      +|+||+||||+|+...     ..+++.+|.+....  ..+...........+.... ....+.+.           +.+.
T Consensus         1 ~iiFD~DGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~   79 (185)
T TIGR01990         1 AVIFDLDGVITDTAEYHYLAWKALADELGIPFDEEFNESLKGVSREDSLERILDLG-GKKYSEEEKEELAERKNDYYVEL   79 (185)
T ss_pred             CeEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHhcCCChHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHH
Confidence            4899999999999753     44556666552111  1111122222222222111 00111111           1111


Q ss_pred             h---cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617           67 L---RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        67 ~---~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      +   ....++||+.++|+.|+++|++++|+||+..  ....++.+|+..+|+.+++..              .....|| 
T Consensus        80 ~~~~~~~~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp-  142 (185)
T TIGR01990        80 LKELTPADVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDAIVDPA--------------EIKKGKP-  142 (185)
T ss_pred             HHhcCCcccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcEEEehh--------------hcCCCCC-
Confidence            1   2347899999999999999999999998743  467889999999999988752              1122356 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeee
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVM  195 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~  195 (265)
                                +++.++.++++++++++++++|||+.+|+.+|+++|+..+++
T Consensus       143 ----------~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~i~v  184 (185)
T TIGR01990       143 ----------DPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFAVGV  184 (185)
T ss_pred             ----------ChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEEEec
Confidence                      899999999999999999999999999999999888765543

The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.

>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional

Probab=99.85  E-value=1.4e-20  Score=150.02  Aligned_cols=164  Identities=12%  Similarity=0.133  Sum_probs=113.4

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccC---ChhHHHHHHHHHHHhCCCCHHHH--------HHH
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTL---PWNSLMDRMMKELHSQGKTVEDI--------ANC   66 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--------~~~   66 (265)
                      +++|+|||||||+||...     ..++.+.|.+..........   .|. ....+.... ......+.+        ...
T Consensus         5 ~~~viFD~DGTLiDs~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   82 (188)
T PRK10725          5 YAGLIFDMDGTILDTEPTHRKAWREVLGRYGLQFDEQAMVALNGSPTWR-IAQAIIELN-QADLDPHALAREKTEAVKSM   82 (188)
T ss_pred             ceEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHH-HHHHHHHHh-CCCCCHHHHHHHHHHHHHHH
Confidence            689999999999999642     55666666642211111111   111 112221111 111121111        111


Q ss_pred             -hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           67 -LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        67 -~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                       .....++|+ .++|..|++. ++++|+||+....+...++++|+..+|+.+++.+              .....||   
T Consensus        83 ~~~~~~~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~i~~~~--------------~~~~~KP---  143 (188)
T PRK10725         83 LLDSVEPLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDAVVAAD--------------DVQHHKP---  143 (188)
T ss_pred             HhccCCCccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceEEEehh--------------hccCCCC---
Confidence             234567786 5899999875 8999999999999999999999999999988852              1122356   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeee
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVM  195 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~  195 (265)
                              +|..+.++++++|++|+++++|||+.+|+++|+++|...+++
T Consensus       144 --------~p~~~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~i~~  185 (188)
T PRK10725        144 --------APDTFLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDAVDV  185 (188)
T ss_pred             --------ChHHHHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEEEee
Confidence                    899999999999999999999999999999998877765544

>PLN02940 riboflavin kinase

Probab=99.85  E-value=1.2e-20  Score=165.59  Aligned_cols=169  Identities=12%  Similarity=0.090  Sum_probs=119.8

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHcc--CChhHHHHHHHHHHHhCCCCHHH--------HHHHh
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRST--LPWNSLMDRMMKELHSQGKTVED--------IANCL   67 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~   67 (265)
                      +++|+||+||||+|+...     ..+++++|.+....+....  .........+..... .....++        +.+..
T Consensus        11 ik~VIFDlDGTLvDt~~~~~~a~~~~~~~~G~~~~~~~~~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   89 (382)
T PLN02940         11 VSHVILDLDGTLLNTDGIVSDVLKAFLVKYGKQWDGREAQKIVGKTPLEAAATVVEDYG-LPCSTDEFNSEITPLLSEQW   89 (382)
T ss_pred             CCEEEECCcCcCCcCHHHHHHHHHHHHHHcCCCCCHHHHHHhcCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHHHH
Confidence            678999999999999653     4455666654222222111  122222222222111 1111111        12233


Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH-hcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIME-HHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~-~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      ....++||+.++|++|+++|++++|+||+....+...++ .+|+.++|+.+++.+              .....||    
T Consensus        90 ~~~~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~ii~~d--------------~v~~~KP----  151 (382)
T PLN02940         90 CNIKALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSVIVGGD--------------EVEKGKP----  151 (382)
T ss_pred             ccCCCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCEEEehh--------------hcCCCCC----
Confidence            467889999999999999999999999999999998887 789999999998852              1122456    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                             +++.+..+++++|++|+++++|||+.+|+.+|+++|...+++..
T Consensus       152 -------~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~  195 (382)
T PLN02940        152 -------SPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPS  195 (382)
T ss_pred             -------CHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECC
Confidence                   89999999999999999999999999999999998876555543

>PRK10748 flavin mononucleotide phosphatase; Provisional

Probab=99.85  E-value=3.1e-20  Score=153.52  Aligned_cols=128  Identities=12%  Similarity=0.100  Sum_probs=96.7

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ....++||+.++|+.|++. ++++|+||+...     ++.+|+..+|+.+++++              .....||     
T Consensus       110 ~~~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~i~~~~--------------~~~~~KP-----  164 (238)
T PRK10748        110 SRIDVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEFVLRAG--------------PHGRSKP-----  164 (238)
T ss_pred             hcCCCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhceeEecc--------------cCCcCCC-----
Confidence            4578899999999999985 999999998765     37789999999998852              1122356     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                            ++.++..+++++|++|+++++|||+ ..|+.+|+++|+..+++.+.+........ ....++..+   .+..||
T Consensus       165 ------~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~-~~~~p~~~i---~~l~el  234 (238)
T PRK10748        165 ------FSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTWD-SRLLPHIEI---SRLASL  234 (238)
T ss_pred             ------cHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEEEcCCCcccccccc-ccCCCCEEE---CCHHHH
Confidence                  8999999999999999999999999 59999999989887777654322111010 112344556   888888


Q ss_pred             HHHH
Q 044617          227 KKIL  230 (265)
Q Consensus       227 ~~~l  230 (265)
                      .++|
T Consensus       235 ~~~~  238 (238)
T PRK10748        235 TSLI  238 (238)
T ss_pred             HhhC
Confidence            7653

>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated

Probab=99.84  E-value=2.2e-20  Score=168.35  Aligned_cols=129  Identities=15%  Similarity=0.148  Sum_probs=101.2

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|++|+++|++++|+||+....+...++++|+..+|+.+++.+.            .   ..+|      
T Consensus       328 ~~~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~~~d~------------v---~~~~------  386 (459)
T PRK06698        328 KGALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETFSIEQ------------I---NSLN------  386 (459)
T ss_pred             CCCcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeEecCC------------C---CCCC------
Confidence            467899999999999999999999999999999999999999999999888521            0   0123      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKK  228 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~  228 (265)
                           ||..+..++++++  +++|++|||+.+|+.+|+++|...+++.. ++......    ..++..+   +++.||.+
T Consensus       387 -----kP~~~~~al~~l~--~~~~v~VGDs~~Di~aAk~AG~~~I~v~~-~~~~~~~~----~~~d~~i---~~l~el~~  451 (459)
T PRK06698        387 -----KSDLVKSILNKYD--IKEAAVVGDRLSDINAAKDNGLIAIGCNF-DFAQEDEL----AQADIVI---DDLLELKG  451 (459)
T ss_pred             -----CcHHHHHHHHhcC--cceEEEEeCCHHHHHHHHHCCCeEEEEeC-CCCccccc----CCCCEEe---CCHHHHHH
Confidence                 7888999998864  68999999999999999998887666654 33322211    1234455   89999988


Q ss_pred             HHHHH
Q 044617          229 ILLHL  233 (265)
Q Consensus       229 ~l~~~  233 (265)
                      ++..+
T Consensus       452 ~l~~~  456 (459)
T PRK06698        452 ILSTV  456 (459)
T ss_pred             HHHHH
Confidence            77554

>COG4359 Uncharacterized conserved protein [Function unknown]

Probab=99.84  E-value=1.1e-19  Score=137.67  Aligned_cols=210  Identities=18%  Similarity=0.253  Sum_probs=150.3

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHHH---HHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHh-cCCCCChhH
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLF---NQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCL-RQCPLDSHV   76 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~   76 (265)
                      |+.-.|+.|+|||++-.++...+...+|.++..   ..++...  ....+.+.+.+...+.+.+++.+.+ ..+.+.||.
T Consensus         1 mkk~vi~sDFDGTITl~Ds~~~itdtf~~~e~k~l~~~vls~t--iS~rd~~g~mf~~i~~s~~Eile~llk~i~Idp~f   78 (220)
T COG4359           1 MKKPVIFSDFDGTITLNDSNDYITDTFGPGEWKALKDGVLSKT--ISFRDGFGRMFGSIHSSLEEILEFLLKDIKIDPGF   78 (220)
T ss_pred             CCceEEEecCCCceEecchhHHHHhccCchHHHHHHHHHhhCc--eeHHHHHHHHHHhcCCCHHHHHHHHHhhcccCccH
Confidence            666678889999999999988999999987643   3333221  1123334444444556666665554 469999999


Q ss_pred             HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc--ceEEecCceecCCCceEEeeccccccCCCcccccCCCCch
Q 044617           77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF--SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCK  154 (265)
Q Consensus        77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f--~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K  154 (265)
                      ++++++.++++++++++|++..+++..+++.++-.+.+  -.++++...++.+|...+....          -.+.|.+|
T Consensus        79 Kef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~h~i~~~~----------ds~fG~dK  148 (220)
T COG4359          79 KEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQHSIKYTD----------DSQFGHDK  148 (220)
T ss_pred             HHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCceeeecCC----------ccccCCCc
Confidence            99999999999999999999999999999987633222  2577777777766654432111          12446679


Q ss_pred             HHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHH
Q 044617          155 GFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLI  234 (265)
Q Consensus       155 ~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~  234 (265)
                      +..+..+.+.    ++.++|.|||.+|+.||   ...+..||+.  ...+. |+..   ...+..|++|.||++.+++.+
T Consensus       149 ~~vI~~l~e~----~e~~fy~GDsvsDlsaa---klsDllFAK~--~L~ny-c~eq---n~~f~~fe~F~eIlk~iekvl  215 (220)
T COG4359         149 SSVIHELSEP----NESIFYCGDSVSDLSAA---KLSDLLFAKD--DLLNY-CREQ---NLNFLEFETFYEILKEIEKVL  215 (220)
T ss_pred             chhHHHhhcC----CceEEEecCCcccccHh---hhhhhHhhHH--HHHHH-HHHc---CCCCcccccHHHHHHHHHHHH
Confidence            9999988875    47799999999999999   6788999975  22222 2221   134556799999999999886


Q ss_pred             H
Q 044617          235 G  235 (265)
Q Consensus       235 ~  235 (265)
                      +
T Consensus       216 ~  216 (220)
T COG4359         216 E  216 (220)
T ss_pred             h
Confidence            5

>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.84  E-value=3.7e-20  Score=149.46  Aligned_cols=169  Identities=18%  Similarity=0.212  Sum_probs=126.7

Q ss_pred             CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHcc-C----ChhHHHHHHHHHHHhCCCCHHHHHHHhcC-CCCChh
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRST-L----PWNSLMDRMMKELHSQGKTVEDIANCLRQ-CPLDSH   75 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g   75 (265)
                      ++++++|||||||++......+....|..........+ +    .+..........  -.|.+.+.+.++... .+++||
T Consensus         4 ~~~L~vFD~D~TLi~~~~~~~~~~~~g~~~~v~~~t~~~~~~~~~~~~~~~~~v~~--l~g~~~~~v~~~~~~~~~l~~g   81 (212)
T COG0560           4 MKKLAVFDLDGTLINAELIDELARGAGVGEEVLAITERAMRGELDFEESLRLRVAL--LKGLPVEVLEEVREEFLRLTPG   81 (212)
T ss_pred             ccceEEEecccchhhHHHHHHHHHHhCCHHHHHHHHHHHhcccccHHHHHHHHHHH--hCCCCHHHHHHHHHhcCcCCcc
Confidence            57899999999999976667777788877654443322 1    233333332222  247777888888877 899999


Q ss_pred             HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchH
Q 044617           76 VAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKG  155 (265)
Q Consensus        76 ~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~  155 (265)
                      +.+++++++++|++++|+|++...+++++.+.+|++.    ++++....++ |.++......      .    ..+.+|.
T Consensus        82 a~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~----~~an~l~~~d-G~ltG~v~g~------~----~~~~~K~  146 (212)
T COG0560          82 AEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDY----VVANELEIDD-GKLTGRVVGP------I----CDGEGKA  146 (212)
T ss_pred             HHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCch----heeeEEEEeC-CEEeceeeee------e----cCcchHH
Confidence            9999999999999999999999999999999999764    4555554554 4444321111      0    1134599


Q ss_pred             HHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          156 FVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       156 ~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                      ..+..+++++|+++++++++|||.||+.|...
T Consensus       147 ~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~  178 (212)
T COG0560         147 KALRELAAELGIPLEETVAYGDSANDLPMLEA  178 (212)
T ss_pred             HHHHHHHHHcCCCHHHeEEEcCchhhHHHHHh
Confidence            99999999999999999999999999999854

>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase

Probab=99.84  E-value=3.5e-20  Score=149.61  Aligned_cols=98  Identities=14%  Similarity=0.161  Sum_probs=83.7

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      ..++||+.++|..|+++|++++|+||+... +...++.+|+..+|+.++++.              .....||       
T Consensus       104 ~~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~s~--------------~~~~~KP-------  161 (203)
T TIGR02252       104 WQVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVTSY--------------EVGAEKP-------  161 (203)
T ss_pred             ceeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEeec--------------ccCCCCC-------
Confidence            467999999999999999999999998765 577889999999999988751              1123456       


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCe
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDF  193 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~  193 (265)
                          ++..+.++++++|++|+++++|||+. +|+.+|+++|...+
T Consensus       162 ----~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~~i  202 (203)
T TIGR02252       162 ----DPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWRAL  202 (203)
T ss_pred             ----CHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCeee
Confidence                78999999999999999999999997 89999988777544

Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.

>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein

Probab=99.83  E-value=2.4e-19  Score=144.10  Aligned_cols=197  Identities=16%  Similarity=0.136  Sum_probs=130.2

Q ss_pred             eEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHHHH
Q 044617            4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKSA   83 (265)
Q Consensus         4 k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~l   83 (265)
                      ++++|||||||++. ....+....|.............+..+...-...+...|.+.+.+.+.+....++||+.++|+.+
T Consensus         2 ~la~FDlD~TLi~~-~w~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~ll~~~g~~~~~i~~~~~~i~l~pga~ell~~l   80 (203)
T TIGR02137         2 EIACLDLEGVLVPE-IWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDWL   80 (203)
T ss_pred             eEEEEeCCcccHHH-HHHHHHHHcCCcHHHHHhcCCcCHHHHHHHHHHHHHHCCCCHHHHHHHHHhCCCCccHHHHHHHH
Confidence            78999999999976 46667777775433211111123455555444444445888888888888889999999999999


Q ss_pred             HHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHHHHH
Q 044617           84 HSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCT  163 (265)
Q Consensus        84 ~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~  163 (265)
                      +++ ++++|+|++...++.++++++|+..    +++++..+++.|.++.....   .          +.+|...++.+ +
T Consensus        81 k~~-~~~~IVS~~~~~~~~~il~~lgi~~----~~an~l~~~~~g~~tG~~~~---~----------~~~K~~~l~~l-~  141 (203)
T TIGR02137        81 RER-FQVVILSDTFYEFSQPLMRQLGFPT----LLCHKLEIDDSDRVVGYQLR---Q----------KDPKRQSVIAF-K  141 (203)
T ss_pred             HhC-CeEEEEeCChHHHHHHHHHHcCCch----hhceeeEEecCCeeECeeec---C----------cchHHHHHHHH-H
Confidence            997 5999999999999999999999764    45554445432443321110   1          12377777777 4


Q ss_pred             hcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          164 SFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       164 ~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      +.+   .++++||||.||+.+++.   ++..++....+.  ..+..+.     +..+.+..||.+.+...
T Consensus       142 ~~~---~~~v~vGDs~nDl~ml~~---Ag~~ia~~ak~~--~~~~~~~-----~~~~~~~~~~~~~~~~~  198 (203)
T TIGR02137       142 SLY---YRVIAAGDSYNDTTMLSE---AHAGILFHAPEN--VIREFPQ-----FPAVHTYEDLKREFLKA  198 (203)
T ss_pred             hhC---CCEEEEeCCHHHHHHHHh---CCCCEEecCCHH--HHHhCCC-----CCcccCHHHHHHHHHHH
Confidence            554   379999999999999955   444444332222  2222222     12237788888877654

This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).

>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase

Probab=99.83  E-value=7.1e-20  Score=145.54  Aligned_cols=102  Identities=12%  Similarity=0.141  Sum_probs=84.0

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...+++|+.++|+.|+   ++++|+||+....+...++.+|+..+|+.+++.+..    +      ......||      
T Consensus        82 ~~~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~~~----~------~~~~~~KP------  142 (184)
T TIGR01993        82 KLKPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFDTA----N------PDYLLPKP------  142 (184)
T ss_pred             hCCCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEeecc----c------CccCCCCC------
Confidence            3567999999999997   479999999999999999999999999998885210    0      00001256      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCee
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFV  194 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~  194 (265)
                           +|.+++++++++|++|+++++|||+..|+.+|+++|...++
T Consensus       143 -----~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~i~  183 (184)
T TIGR01993       143 -----SPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKTVL  183 (184)
T ss_pred             -----CHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEEee
Confidence                 89999999999999999999999999999999988776543

These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).

>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like

Probab=99.83  E-value=8.9e-20  Score=143.94  Aligned_cols=169  Identities=25%  Similarity=0.308  Sum_probs=114.1

Q ss_pred             EEEEecCCCCCCCCchHHHHHHh-CchHHHHHHHcc--CChhHHHHHHHHHHHhC-CCCHHHHHH-H-hcCCCCChhHHH
Q 044617            5 VVVFDFDRTLIDDDSDNWVVTQM-GLTHLFNQLRST--LPWNSLMDRMMKELHSQ-GKTVEDIAN-C-LRQCPLDSHVAA   78 (265)
Q Consensus         5 ~iifD~DGTL~ds~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~g~~e   78 (265)
                      +++|||||||+..++...+++.+ +.......+...  .++..+.+.+...+... +...+++.+ + .....++||+.+
T Consensus         1 l~~fD~DgTl~~~~s~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~   80 (177)
T TIGR01488         1 LAIFDFDGTLTRQDSLIDLLAKLLGTNDEVIELTRLAPSGRISFEDALGRRLALLHRSRSEEVAKEFLARQVALRPGARE   80 (177)
T ss_pred             CEEecCccccccchhhHHHHHHHhCChHHHHHHHHHHHCCCCCHHHHHHHHHHHhCCCCHHHHHHHHHHhcCCcCcCHHH
Confidence            48999999999998855444443 432322222211  12323333333332222 333234443 3 356778999999


Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                      +++.++++|++++|+|++...+++.+++++|+..    ++++...++++|.++..         ...+.++.+.+|+..+
T Consensus        81 ~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~----~~~~~~~~~~~g~~~g~---------~~~~~~~~~~~K~~~l  147 (177)
T TIGR01488        81 LISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDD----VFANRLEFDDNGLLTGP---------IEGQVNPEGECKGKVL  147 (177)
T ss_pred             HHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCch----heeeeEEECCCCEEeCc---------cCCcccCCcchHHHHH
Confidence            9999999999999999999999999999999764    45554445444543311         0111124466799999


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCccccc
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTL  186 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~  186 (265)
                      +.++++.+++++++++||||.+|+.+++
T Consensus       148 ~~~~~~~~~~~~~~~~iGDs~~D~~~~~  175 (177)
T TIGR01488       148 KELLEESKITLKKIIAVGDSVNDLPMLK  175 (177)
T ss_pred             HHHHHHhCCCHHHEEEEeCCHHHHHHHh
Confidence            9999999999999999999999999984

Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.

>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.83  E-value=5.9e-19  Score=144.88  Aligned_cols=130  Identities=18%  Similarity=0.199  Sum_probs=106.2

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      .+.+|++.+.|+.++++ ++++|+||+........++.+|+.++|+.++.+              ...+..||       
T Consensus        98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s--------------~~~g~~KP-------  155 (229)
T COG1011          98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFIS--------------EDVGVAKP-------  155 (229)
T ss_pred             CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEe--------------cccccCCC-------
Confidence            78899999999999998 999999999999999999999999999999985              22234466       


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKK  228 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~  228 (265)
                          .+.+++.+++++|++|+++++|||+. ||+.+|+++|+.++++...+...    ......++..+   .++.+|.+
T Consensus       156 ----~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~----~~~~~~~~~~i---~~l~~l~~  224 (229)
T COG1011         156 ----DPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMKTVWINRGGKPL----PDALEAPDYEI---SSLAELLD  224 (229)
T ss_pred             ----CcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcEEEEECCCCCCC----CCCccCCceEE---cCHHHHHH
Confidence                78999999999999999999999995 88899999999988877664332    11112234455   88888888


Q ss_pred             HHHH
Q 044617          229 ILLH  232 (265)
Q Consensus       229 ~l~~  232 (265)
                      .+..
T Consensus       225 ~~~~  228 (229)
T COG1011         225 LLER  228 (229)
T ss_pred             HHhh
Confidence            7653

>PLN02779 haloacid dehalogenase-like hydrolase family protein

Probab=99.82  E-value=2e-19  Score=152.27  Aligned_cols=133  Identities=11%  Similarity=0.054  Sum_probs=95.8

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccce--EEecCceecCCCceEEeeccccccCCCcccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE--IYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~--i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ..++||+.++|+.|+++|++++|+||+....+..+++.++...+|+.  +++.              ......||     
T Consensus       143 ~~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~--------------~~~~~~KP-----  203 (286)
T PLN02779        143 LPLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAG--------------DDVPKKKP-----  203 (286)
T ss_pred             CCchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEec--------------cccCCCCC-----
Confidence            57899999999999999999999999999999998887643333331  2232              11122356     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                            +|.++..+++++|++|+++++|||+.+|+.+|+++|+..+++. +|+.....+.    .++..+   +++.|+.
T Consensus       204 ------~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~-~g~~~~~~l~----~ad~vi---~~~~~l~  269 (286)
T PLN02779        204 ------DPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTK-SSYTADEDFS----GADAVF---DCLGDVP  269 (286)
T ss_pred             ------CHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEc-cCCccccccC----CCcEEE---CChhhcc
Confidence                  8999999999999999999999999999999999887656554 4443322221    234445   7887744


Q ss_pred             H-HHHHHHH
Q 044617          228 K-ILLHLIG  235 (265)
Q Consensus       228 ~-~l~~~~~  235 (265)
                      . -++-++.
T Consensus       270 ~~~~~~~~~  278 (286)
T PLN02779        270 LEDFDLLFC  278 (286)
T ss_pred             hhhhHHHHH
Confidence            3 3444443

>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548

Probab=99.82  E-value=1.4e-19  Score=145.50  Aligned_cols=90  Identities=13%  Similarity=0.051  Sum_probs=78.5

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCC
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSN  151 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~  151 (265)
                      +.+++.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++.+              .... ||         
T Consensus       107 ~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~~~--------------~~~~-KP---------  162 (197)
T TIGR01548       107 TLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIWME--------------DCPP-KP---------  162 (197)
T ss_pred             cccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEeec--------------CCCC-Cc---------
Confidence            34456999999999999999999999999999999999999999888841              1112 56         


Q ss_pred             CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                        ++..+..+++++|++++++++|||+.+|+.+|++
T Consensus       163 --~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~  196 (197)
T TIGR01548       163 --NPEPLILAAKALGVEACHAAMVGDTVDDIITGRK  196 (197)
T ss_pred             --CHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHh
Confidence              8999999999999999999999999999999854

All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.

>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A

Probab=99.81  E-value=3.7e-20  Score=145.17  Aligned_cols=164  Identities=19%  Similarity=0.292  Sum_probs=115.1

Q ss_pred             EEEecCCCCCCCCch-----H-HHHHHhCchHHHHHHHccC--ChhHHHHHHHHHHHhC-CCCHHHHHHH--hcCCCCCh
Q 044617            6 VVFDFDRTLIDDDSD-----N-WVVTQMGLTHLFNQLRSTL--PWNSLMDRMMKELHSQ-GKTVEDIANC--LRQCPLDS   74 (265)
Q Consensus         6 iifD~DGTL~ds~~~-----~-~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~   74 (265)
                      |+||+||||+++...     . .+.+.++.+.....+....  ........+....... ....+.+.+.  ....+++|
T Consensus         1 iifD~dgtL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (176)
T PF13419_consen    1 IIFDLDGTLVDTDPAIFRALQRLALEEFGLEISAEELRELFGKSYEEALERLLERFGIDPEEIQELFREYNLESKLQPYP   80 (176)
T ss_dssp             EEEESBTTTEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGEEEST
T ss_pred             cEEECCCCcEeCHHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHhhhccchhHHHHHHHhhhhhhhhccchhh
Confidence            799999999998662     1 1344555543222222221  1112222222211110 0011122222  35678999


Q ss_pred             hHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCch
Q 044617           75 HVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCK  154 (265)
Q Consensus        75 g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K  154 (265)
                      |+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++..              .....||           +
T Consensus        81 ~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~~~~--------------~~~~~Kp-----------~  135 (176)
T PF13419_consen   81 GVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEIISSD--------------DVGSRKP-----------D  135 (176)
T ss_dssp             THHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEEEGG--------------GSSSSTT-----------S
T ss_pred             hhhhhhhhcccccceeEEeecCCcccccccccccccccccccccccc--------------hhhhhhh-----------H
Confidence            99999999999999999999999999999999999999999998852              1222456           7


Q ss_pred             HHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCee
Q 044617          155 GFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFV  194 (265)
Q Consensus       155 ~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~  194 (265)
                      +..++.+++++|++|+++++|||+..|+.+|+++|...+.
T Consensus       136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~i~  175 (176)
T PF13419_consen  136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKTIW  175 (176)
T ss_dssp             HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEEEE
T ss_pred             HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeEEe
Confidence            8999999999999999999999999999999988876554

...

>PRK09456 ?-D-glucose-1-phosphatase; Provisional

Probab=99.80  E-value=8.4e-19  Score=141.13  Aligned_cols=102  Identities=14%  Similarity=0.179  Sum_probs=85.8

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-cCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ..++||+.++|+.|+++|++++|+||+....+...+.. .++..+|+.++++              ......||      
T Consensus        83 ~~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~v~~s--------------~~~~~~KP------  142 (199)
T PRK09456         83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADHIYLS--------------QDLGMRKP------  142 (199)
T ss_pred             hccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCEEEEe--------------cccCCCCC------
Confidence            46899999999999999999999999988877766554 4788889988885              22233467      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                           +|..++.+++++|++|+++++|||+..|+.+|+++|...+.+.
T Consensus       143 -----~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~  185 (199)
T PRK09456        143 -----EARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVT  185 (199)
T ss_pred             -----CHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEec
Confidence                 8999999999999999999999999999999998887665554

>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated

Probab=99.80  E-value=3.4e-19  Score=141.29  Aligned_cols=137  Identities=12%  Similarity=0.017  Sum_probs=95.6

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQ---------------FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~---------------~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...++||+.++|++|+++|++++|+||+..               ..+...++++|+  .|+.++.......        
T Consensus        27 ~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~--~f~~i~~~~~~~~--------   96 (181)
T PRK08942         27 EWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGG--RLDGIYYCPHHPE--------   96 (181)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCC--ccceEEECCCCCC--------
Confidence            456899999999999999999999999862               344556677776  3666665311000        


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCee
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLI  213 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (265)
                       ......||           ++.++..+++++|++++++++|||+.+|+.+|+++|...+ .+.+|+....+....+ ..
T Consensus        97 -~~~~~~KP-----------~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i-~v~~g~~~~~~~~~~~-~~  162 (181)
T PRK08942         97 -DGCDCRKP-----------KPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPV-LVRTGKGVTTLAEGAA-PG  162 (181)
T ss_pred             -CCCcCCCC-----------CHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEE-EEcCCCCchhhhcccC-CC
Confidence             11123466           8999999999999999999999999999999999888544 4455554322221111 00


Q ss_pred             eEEEEeCCCHHHHHHHHHH
Q 044617          214 KAKVHEWSSAEELKKILLH  232 (265)
Q Consensus       214 ~~~~~~~~~~~el~~~l~~  232 (265)
                      +..+   +++.||.++|.+
T Consensus       163 ~~ii---~~l~el~~~l~~  178 (181)
T PRK08942        163 TWVL---DSLADLPQALKK  178 (181)
T ss_pred             ceee---cCHHHHHHHHHh
Confidence            3444   889998887653

>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED

Probab=99.80  E-value=2.7e-19  Score=141.75  Aligned_cols=99  Identities=8%  Similarity=0.070  Sum_probs=84.4

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      ..++||+.++|+.|+++|++++|+||+.... .....++|+..+|+.+++..              .....||       
T Consensus        84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~~~~--------------~~~~~KP-------  141 (183)
T TIGR01509        84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVIFSG--------------DVGRGKP-------  141 (183)
T ss_pred             CccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEEEcC--------------CCCCCCC-------
Confidence            5889999999999999999999999999888 66666699999999988741              1123456       


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCee
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFV  194 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~  194 (265)
                          ++..++.+++++|++|+++++|||+..|+.+|+++|...+.
T Consensus       142 ----~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~~i~  182 (183)
T TIGR01509       142 ----DPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMHTVL  182 (183)
T ss_pred             ----CHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCEEEe
Confidence                78999999999999999999999999999999887775543

HAD subfamilies caused by an overly broad single model.

>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase

Probab=99.80  E-value=1.7e-19  Score=146.54  Aligned_cols=103  Identities=13%  Similarity=0.183  Sum_probs=82.7

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHH--HHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFY--IETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~--i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      ...++||+.++|+.|+++|++++|+||+....  ....+...++..+|+.++++              ......||    
T Consensus        92 ~~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~v~~s--------------~~~~~~KP----  153 (211)
T TIGR02247        92 NTKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDAVVES--------------CLEGLRKP----  153 (211)
T ss_pred             ccccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCEEEEe--------------eecCCCCC----
Confidence            46789999999999999999999999986543  33334456788889988874              12223466    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                             +|..+..+++++|++|+++++|||+..|+.+|+++|...+.+.
T Consensus       154 -------~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~i~v~  196 (211)
T TIGR02247       154 -------DPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITTIKVS  196 (211)
T ss_pred             -------CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEEEEEC
Confidence                   7899999999999999999999999999999988777655544

These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.

>PLN02919 haloacid dehalogenase-like hydrolase family protein

Probab=99.79  E-value=2.3e-18  Score=167.68  Aligned_cols=208  Identities=11%  Similarity=0.046  Sum_probs=135.0

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccC--ChhHHHHHHHHHHHhCCCCHHH----HH----HH
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTL--PWNSLMDRMMKELHSQGKTVED----IA----NC   66 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~----~~   66 (265)
                      ++++|+|||||||+|+...     ..++++.|++.....+....  ........+.......+...+.    +.    +.
T Consensus        74 ~ikaVIFDlDGTLiDS~~~~~~a~~~~~~~~G~~it~e~~~~~~G~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  153 (1057)
T PLN02919         74 KVSAVLFDMDGVLCNSEEPSRRAAVDVFAEMGVEVTVEDFVPFMGTGEANFLGGVASVKGVKGFDPDAAKKRFFEIYLEK  153 (1057)
T ss_pred             CCCEEEECCCCCeEeChHHHHHHHHHHHHHcCCCCCHHHHHHHhCCCHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            4689999999999999753     45566667652222222111  1111111111110000111111    11    11


Q ss_pred             h---cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc-cccceEEecCceecCCCceEEeeccccccCC
Q 044617           67 L---RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL-GCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        67 ~---~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~-~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                      +   ....++||+.++|++|+++|++++|+||+....+...++++|+. .+|+.+++.+              .....||
T Consensus       154 ~~~~~~~~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~iv~~~--------------~~~~~KP  219 (1057)
T PLN02919        154 YAKPNSGIGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAIVSAD--------------AFENLKP  219 (1057)
T ss_pred             hhhcccCccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEEEECc--------------ccccCCC
Confidence            1   11246999999999999999999999999999999999999996 7899988852              1122356


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                                 +|+++.++++++|++|+++++|||+.+|+++|+++|+..+++. +++....+...   .++..+   ++
T Consensus       220 -----------~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~-~~~~~~~L~~~---~a~~vi---~~  281 (1057)
T PLN02919        220 -----------APDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVT-TTLSEEILKDA---GPSLIR---KD  281 (1057)
T ss_pred             -----------CHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCCHHHHhhC---CCCEEE---CC
Confidence                       8999999999999999999999999999999999888666554 44544443322   233455   88


Q ss_pred             HHHHHHHHHHHHHhhcccccc
Q 044617          223 AEELKKILLHLIGAISIKEDV  243 (265)
Q Consensus       223 ~~el~~~l~~~~~~~~~~~~~  243 (265)
                      +.|+.  +..++...+...+|
T Consensus       282 l~el~--~~~~~~~~~~~~~~  300 (1057)
T PLN02919        282 IGNIS--LSDILTGGSDATPN  300 (1057)
T ss_pred             hHHCC--HHHHHhcCCCCCCC
Confidence            88863  33444333333333

>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E

Probab=99.79  E-value=1e-18  Score=134.84  Aligned_cols=93  Identities=16%  Similarity=0.138  Sum_probs=80.0

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ....++|+.++|+.|+++|++++|+||+....+...++.+ +..+|+.+++.+              ... .||      
T Consensus        62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f~~i~~~~--------------~~~-~Kp------  119 (154)
T TIGR01549        62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYFDLILGSD--------------EFG-AKP------  119 (154)
T ss_pred             hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcCcEEEecC--------------CCC-CCc------
Confidence            4456799999999999999999999999999999999987 778888888741              111 456      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                           ++..+.++++++|+++ ++++|||+..|+.+|+++|
T Consensus       120 -----~~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG  154 (154)
T TIGR01549       120 -----EPEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG  154 (154)
T ss_pred             -----CHHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence                 8999999999999999 9999999999999997643

HAD subfamilies caused by an overly broad single model.

>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase

Probab=99.79  E-value=2.9e-19  Score=141.01  Aligned_cols=137  Identities=13%  Similarity=0.118  Sum_probs=95.0

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQ---------------FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~---------------~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...++||+.++|++|+++|++++|+||+..               .++...+.++++.  |+.++.........+.+   
T Consensus        24 ~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~~~~~~~~~~~---   98 (176)
T TIGR00213        24 NFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVD--LDGIYYCPHHPEGVEEF---   98 (176)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCC--ccEEEECCCCCcccccc---
Confidence            457899999999999999999999999874               3445566677765  66665431111100000   


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCee
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLI  213 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (265)
                      ......+||           ++.++..+++++|+++++++||||+.+|+++|+++|...++++.+|+.......   ..+
T Consensus        99 ~~~~~~~KP-----------~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~---~~a  164 (176)
T TIGR00213        99 RQVCDCRKP-----------KPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAE---NIA  164 (176)
T ss_pred             cCCCCCCCC-----------CHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCccccccc---ccC
Confidence            001123456           899999999999999999999999999999999988776455666654322111   124


Q ss_pred             eEEEEeCCCHHHHH
Q 044617          214 KAKVHEWSSAEELK  227 (265)
Q Consensus       214 ~~~~~~~~~~~el~  227 (265)
                      +..+   +++.||.
T Consensus       165 d~~i---~~~~el~  175 (176)
T TIGR00213       165 DWVL---NSLADLP  175 (176)
T ss_pred             CEEe---ccHHHhh
Confidence            4555   8888875

This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).

>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]

Probab=99.78  E-value=6.8e-18  Score=129.23  Aligned_cols=168  Identities=17%  Similarity=0.253  Sum_probs=127.1

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHcc-----CChhHHHHHHHHHHHhCCCCHHHHHHHh--cCCCCChh
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRST-----LPWNSLMDRMMKELHSQGKTVEDIANCL--RQCPLDSH   75 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g   75 (265)
                      .++|+||+|.|++..+.+..+++..|..+...++..+     ..+......-...+   .....+....+  ...++.||
T Consensus        16 ~~aVcFDvDSTvi~eEgIdelA~~~G~~~~Va~~T~rAMng~~~F~eaL~~Rl~ll---qp~~~qv~~~v~~~k~~lT~G   92 (227)
T KOG1615|consen   16 ADAVCFDVDSTVIQEEGIDELAAYCGVGEAVAEVTRRAMNGEADFQEALAARLSLL---QPLQVQVEQFVIKQKPTLTPG   92 (227)
T ss_pred             cCeEEEecCcchhHHhhHHHHHHHhCchHHHHHHHHHHhCCCCcHHHHHHHHHHHh---cccHHHHHHHHhcCCCccCCC
Confidence            4789999999999999999999999998776665533     23444333322222   22233333333  35788999


Q ss_pred             HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchH
Q 044617           76 VAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKG  155 (265)
Q Consensus        76 ~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~  155 (265)
                      ++++...|+++|..++++|++....+.++...+|++  +..+++|...++.+|.+......    .|.     .-+.+|+
T Consensus        93 i~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~--~~n~yAN~l~fd~~Gk~~gfd~~----~pt-----sdsggKa  161 (227)
T KOG1615|consen   93 IRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIP--KSNIYANELLFDKDGKYLGFDTN----EPT-----SDSGGKA  161 (227)
T ss_pred             HHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCc--HhhhhhheeeeccCCcccccccC----Ccc-----ccCCccH
Confidence            999999999999999999999999999999999987  44789999999988876642111    111     2245699


Q ss_pred             HHHHHHHHhcCCCCceEEEEcCCCCCccccc
Q 044617          156 FVLDHVCTSFGCGKQRFIYLGDGRGDFCPTL  186 (265)
Q Consensus       156 ~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~  186 (265)
                      +++..+.+  +.+.+.++||||+.||++|..
T Consensus       162 ~~i~~lrk--~~~~~~~~mvGDGatDlea~~  190 (227)
T KOG1615|consen  162 EVIALLRK--NYNYKTIVMVGDGATDLEAMP  190 (227)
T ss_pred             HHHHHHHh--CCChheeEEecCCccccccCC
Confidence            99999888  677789999999999999883

>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain

Probab=99.77  E-value=4.5e-19  Score=135.76  Aligned_cols=105  Identities=12%  Similarity=0.121  Sum_probs=80.0

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHhcCcccccceEEecCceecCCCceEEee
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQ---------------FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILP  134 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~---------------~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~  134 (265)
                      ..++||+.++|+.|+++|++++|+||+..               ..+...++.+|+..  ...+.......         
T Consensus        26 ~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~---------   94 (147)
T TIGR01656        26 WQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAV--DGVLFCPHHPA---------   94 (147)
T ss_pred             eEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCce--eEEEECCCCCC---------
Confidence            46899999999999999999999999873               46777788888752  11221100000         


Q ss_pred             ccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          135 YHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       135 ~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                      ......||           ++++++++++++++++++++||||+..|+++|+++|...+++.
T Consensus        95 ~~~~~~KP-----------~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v~i~  145 (147)
T TIGR01656        95 DNCSCRKP-----------KPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAVLLV  145 (147)
T ss_pred             CCCCCCCC-----------CHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEEEec
Confidence            01112356           8999999999999999999999999999999999888766654

This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.

>PHA02597 30

Probab=99.76  E-value=1.4e-18  Score=139.58  Aligned_cols=163  Identities=10%  Similarity=0.064  Sum_probs=102.5

Q ss_pred             ceEEEEecCCCCCCCCc-hHHHHHHhCchH-HHHHHHccCChhHHHHHHH---HHHHhCCCCHHHH--HHHhcCCCCChh
Q 044617            3 DVVVVFDFDRTLIDDDS-DNWVVTQMGLTH-LFNQLRSTLPWNSLMDRMM---KELHSQGKTVEDI--ANCLRQCPLDSH   75 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~g   75 (265)
                      +|+|+|||||||+|... ...++++.|++. .+...............+.   .....  . .+.+  ........++||
T Consensus         2 ~k~viFDlDGTLiD~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~pG   78 (197)
T PHA02597          2 KPTILTDVDGVLLSWQSGLPYFAQKYNIPTDHILKMIQDERFRDPGELFGCDQELAKK--L-IEKYNNSDFIRYLSAYDD   78 (197)
T ss_pred             CcEEEEecCCceEchhhccHHHHHhcCCCHHHHHHHHhHhhhcCHHHHhcccHHHHHH--H-hhhhhHHHHHHhccCCCC
Confidence            69999999999999643 245666777652 1111111100000000000   00000  0 0001  112245678999


Q ss_pred             HHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc----ceEEecCceecCCCceEEeeccccccCCCcccccCCC
Q 044617           76 VAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF----SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSN  151 (265)
Q Consensus        76 ~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f----~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~  151 (265)
                      +.++|+.|++. ++++++||+........++.+++..+|    +.+++.+             .    .+|         
T Consensus        79 ~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~-------------~----~~~---------  131 (197)
T PHA02597         79 ALDVINKLKED-YDFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCG-------------H----DES---------  131 (197)
T ss_pred             HHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEec-------------c----Ccc---------
Confidence            99999999997 578888998776666667777776544    4444421             0    123         


Q ss_pred             CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCC--CCCCeeeecCCC
Q 044617          152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKL--RDCDFVMPRKNY  200 (265)
Q Consensus       152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~--~~~~~~~~~~~~  200 (265)
                        |++.+..+++++|  +++++||||+.+|+.+|+++  |...+.+ .+++
T Consensus       132 --kp~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i~~-~~~~  177 (197)
T PHA02597        132 --KEKLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVIHM-LRGE  177 (197)
T ss_pred             --cHHHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEEEe-cchh
Confidence              8899999999999  78899999999999999987  7765555 4543

2 hypothetical protein; Provisional

>PRK06769 hypothetical protein; Validated

Probab=99.75  E-value=3.6e-18  Score=134.21  Aligned_cols=134  Identities=7%  Similarity=-0.018  Sum_probs=90.5

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHH--------HHHHHHHhcCcccccceEEecCceecCCCceEEeecccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQF--------YIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTL  140 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~--------~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~  140 (265)
                      ...++||+.++|++|+++|++++|+||+...        .....++.+|+..+|..+...             .......
T Consensus        26 ~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~-------------~~~~~~~   92 (173)
T PRK06769         26 SFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLCPHKH-------------GDGCECR   92 (173)
T ss_pred             HeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEECcCCC-------------CCCCCCC
Confidence            3567999999999999999999999998642        133336667765432211100             0111234


Q ss_pred             CCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhh--hcC--CCeeeEE
Q 044617          141 SHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRI--CSN--PMLIKAK  216 (265)
Q Consensus       141 kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~  216 (265)
                      ||           ++..+..++++++++|++++||||+.+|+.+|+++|...+.+. +|+....+.  .+.  ...++..
T Consensus        93 KP-----------~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i~v~-~g~~~~~~~~~~~~l~~~~~~~~  160 (173)
T PRK06769         93 KP-----------STGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTILVR-TGAGYDALHTYRDKWAHIEPNYI  160 (173)
T ss_pred             CC-----------CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEe-cCCCchhhhhhhcccccCCCcch
Confidence            66           8999999999999999999999999999999999888766664 443322110  000  1112333


Q ss_pred             EEeCCCHHHHHHHH
Q 044617          217 VHEWSSAEELKKIL  230 (265)
Q Consensus       217 ~~~~~~~~el~~~l  230 (265)
                      +   +++.||.++|
T Consensus       161 ~---~~~~el~~~l  171 (173)
T PRK06769        161 A---ENFEDAVNWI  171 (173)
T ss_pred             h---hCHHHHHHHH
Confidence            4   8888887765

>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA

Probab=99.75  E-value=3.9e-18  Score=128.23  Aligned_cols=98  Identities=15%  Similarity=0.169  Sum_probs=81.3

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCC--------HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDAN--------QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLS  141 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~--------~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~k  141 (265)
                      ..++|++.++|+.|+++|++++|+||+.        ...+...++.+++.  +..++..              .  ...|
T Consensus        24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~--~~~~~~~--------------~--~~~K   85 (132)
T TIGR01662        24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP--IDVLYAC--------------P--HCRK   85 (132)
T ss_pred             heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCC--EEEEEEC--------------C--CCCC
Confidence            4779999999999999999999999998        78899999999985  2233332              1  1235


Q ss_pred             CCcccccCCCCchHHHHHHHHHhc-CCCCceEEEEcC-CCCCcccccCCCCCCeeee
Q 044617          142 HHGCNLCPSNLCKGFVLDHVCTSF-GCGKQRFIYLGD-GRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       142 p~~~~~~~~~~~K~~~i~~~~~~~-gi~~~~~v~vGD-~~~Di~~a~~~~~~~~~~~  196 (265)
                      |           +++.++++++++ ++++++++|||| +.+|+.+|+++|...+++.
T Consensus        86 P-----------~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~  131 (132)
T TIGR01662        86 P-----------KPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA  131 (132)
T ss_pred             C-----------ChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence            6           899999999999 599999999999 7999999998887766553

In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.

>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490

Probab=99.75  E-value=5.9e-17  Score=130.61  Aligned_cols=120  Identities=13%  Similarity=0.045  Sum_probs=89.1

Q ss_pred             CCCCHHHHHHHh----c---CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCC
Q 044617           56 QGKTVEDIANCL----R---QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQG  128 (265)
Q Consensus        56 ~~~~~~~~~~~~----~---~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~  128 (265)
                      .|.+.+++....    .   ...++|++.++|+.++++|++++|+|++...+++.+++++|+..    +++++..++++|
T Consensus        65 ~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~----~~~~~l~~~~~g  140 (202)
T TIGR01490        65 AGLLEEDVRAIVEEFVNQKIESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDN----AIGTRLEESEDG  140 (202)
T ss_pred             cCCCHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcc----eEecceEEcCCC
Confidence            466666554322    1   24689999999999999999999999999999999999999764    444444443344


Q ss_pred             ceEEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          129 RLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       129 ~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                      .++.....     |.     ..+..|...++.++++.+++++++++||||.+|+.+++.++
T Consensus       141 ~~~g~~~~-----~~-----~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~  191 (202)
T TIGR01490       141 IYTGNIDG-----NN-----CKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVG  191 (202)
T ss_pred             EEeCCccC-----CC-----CCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCC
Confidence            44432111     00     12345889999999999999999999999999999996644

A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.

>PLN02811 hydrolase

Probab=99.74  E-value=1.5e-17  Score=135.84  Aligned_cols=107  Identities=9%  Similarity=0.099  Sum_probs=85.6

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH-HHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIET-IMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~-~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      ....++||+.++|+.|+++|++++|+||+....+.. ..+..++.++|+.+++.+.            ......||    
T Consensus        75 ~~~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i~~~~~------------~~~~~~KP----  138 (220)
T PLN02811         75 PTSDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHVVTGDD------------PEVKQGKP----  138 (220)
T ss_pred             hhCCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEEEECCh------------hhccCCCC----
Confidence            456789999999999999999999999998765544 3344577888998888520            01112356    


Q ss_pred             ccCCCCchHHHHHHHHHhcC---CCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          147 LCPSNLCKGFVLDHVCTSFG---CGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~g---i~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                             +|+++..++++++   +.+++++||||+..|+++|+++|+..+.+..
T Consensus       139 -------~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i~v~~  185 (220)
T PLN02811        139 -------APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVVMVPD  185 (220)
T ss_pred             -------CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEEEEeC
Confidence                   8899999999996   9999999999999999999998887666654

>TIGR01261 hisB_Nterm histidinol-phosphatase

Probab=99.73  E-value=3.8e-18  Score=132.04  Aligned_cols=107  Identities=15%  Similarity=0.176  Sum_probs=84.7

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCC---------------CHHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDA---------------NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~---------------~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...++||+.++|++|+++|++++|+||.               ....+..+++.+|+.  |+.++......         
T Consensus        27 ~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~---------   95 (161)
T TIGR01261        27 KLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFP---------   95 (161)
T ss_pred             HeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCC---------
Confidence            4578999999999999999999999996               356788889999996  76554320000         


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      .......||           ++..+..+++++++++++++||||+.+|+.+|+++|...+.+..
T Consensus        96 ~~~~~~~KP-----------~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i~~~~  148 (161)
T TIGR01261        96 DDNCDCRKP-----------KIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGIQYDE  148 (161)
T ss_pred             CCCCCCCCC-----------CHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEEEECh
Confidence            011123466           89999999999999999999999999999999988877666654

This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.

>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase

Probab=99.73  E-value=1.5e-17  Score=129.48  Aligned_cols=93  Identities=14%  Similarity=0.136  Sum_probs=74.4

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHH------------HHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQF------------YIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~------------~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                      ++||+.++|+.|+++|++++|+||+...            .+..+++++|+..  +.+++..              ....
T Consensus        43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~--~~ii~~~--------------~~~~  106 (166)
T TIGR01664        43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI--QVLAATH--------------AGLY  106 (166)
T ss_pred             ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE--EEEEecC--------------CCCC
Confidence            6899999999999999999999998763            5778889999853  3444421              1112


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcC--CCCceEEEEcCCC--------CCcccccCCCCC
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFG--CGKQRFIYLGDGR--------GDFCPTLKLRDC  191 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~g--i~~~~~v~vGD~~--------~Di~~a~~~~~~  191 (265)
                      .||           ++..++.+++++|  +++++++||||+.        +|+++|+++|..
T Consensus       107 ~KP-----------~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~  157 (166)
T TIGR01664       107 RKP-----------MTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLE  157 (166)
T ss_pred             CCC-----------ccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCC
Confidence            356           7899999999999  9999999999996        699999775543

The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.

>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase

Probab=99.73  E-value=1.2e-17  Score=131.69  Aligned_cols=90  Identities=18%  Similarity=0.255  Sum_probs=77.3

Q ss_pred             HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                      .+....++||+.++|+       +++|+||+....+...++++|+..+|+.+++.+              .....||   
T Consensus        85 ~~~~~~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~v~~~~--------------~~~~~KP---  140 (175)
T TIGR01493        85 AYKNLPPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDRAFSVD--------------TVRAYKP---  140 (175)
T ss_pred             HHhcCCCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhhhccHh--------------hcCCCCC---
Confidence            3456789999999998       388999999999999999999999999888752              1123466   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                              +|..+..+++++|++|++|++|||+.+|+.+|++
T Consensus       141 --------~p~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~  174 (175)
T TIGR01493       141 --------DPVVYELVFDTVGLPPDRVLMVAAHQWDLIGARK  174 (175)
T ss_pred             --------CHHHHHHHHHHHCCCHHHeEeEecChhhHHHHhc
Confidence                    8999999999999999999999999999999854

The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o

>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672

Probab=99.71  E-value=6.1e-17  Score=132.36  Aligned_cols=143  Identities=13%  Similarity=0.062  Sum_probs=93.8

Q ss_pred             eEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHh-cCCCCChhHHHHHHH
Q 044617            4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCL-RQCPLDSHVAAAIKS   82 (265)
Q Consensus         4 k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~e~l~~   82 (265)
                      -+|+||+||||+|+....    ..|.+......+........              .+.+.... ....+.+++.++|++
T Consensus        64 ~aViFDlDgTLlDSs~~~----~~G~~~~s~~~~~~l~g~~~--------------w~~~~~~~~~~s~p~~~a~elL~~  125 (237)
T TIGR01672        64 IAVSFDIDDTVLFSSPGF----WRGKKTFSPGSEDYLKNQVF--------------WEKVNNGWDEFSIPKEVARQLIDM  125 (237)
T ss_pred             eEEEEeCCCccccCcHHH----hCCcccCCHHHhhhhcChHH--------------HHHHHHhcccCCcchhHHHHHHHH
Confidence            389999999999997743    13333211100000000000              11111111 234567779999999


Q ss_pred             HHHcCCcEEEEeCC----CHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           83 AHSLGCDLKIVSDA----NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        83 l~~~g~~~~ivS~~----~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                      ++++|++++++||+    ....++.+++++|+..+|+.+++.+.            .  ...             |+...
T Consensus       126 l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~------------~--~~~-------------Kp~~~  178 (237)
T TIGR01672       126 HQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDK------------P--GQY-------------QYTKT  178 (237)
T ss_pred             HHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCC------------C--CCC-------------CCCHH
Confidence            99999999999998    67789999999999999888777411            0  001             22222


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                       .+++++++    ++||||+.+|+.+|+++|...+.+.
T Consensus       179 -~~l~~~~i----~i~vGDs~~DI~aAk~AGi~~I~V~  211 (237)
T TIGR01672       179 -QWIQDKNI----RIHYGDSDNDITAAKEAGARGIRIL  211 (237)
T ss_pred             -HHHHhCCC----eEEEeCCHHHHHHHHHCCCCEEEEE
Confidence             35566665    7999999999999999887766665

Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.

>TIGR01685 MDP-1 magnesium-dependent phosphatase-1

Probab=99.71  E-value=6.6e-18  Score=131.62  Aligned_cols=107  Identities=9%  Similarity=0.042  Sum_probs=83.1

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCC-CHHHHHHHHHhcCcc---------cccceEEecCceecCCCceEEeecccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDA-NQFYIETIMEHHGLL---------GCFSEIYTNPTYVDEQGRLRILPYHDS  138 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~-~~~~i~~~l~~~gl~---------~~f~~i~~~~~~~d~~~~~~~~~~~~~  138 (265)
                      ...++||+.++|+.|+++|++++|+||+ ....++.+++.+++.         ++|+.+++.+.              ..
T Consensus        43 ~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~~~~Fd~iv~~~~--------------~~  108 (174)
T TIGR01685        43 EVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPMHSLFDDRIEIYK--------------PN  108 (174)
T ss_pred             EEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccHHHhceeeeeccC--------------Cc
Confidence            5688999999999999999999999998 889999999999998         89998888521              00


Q ss_pred             ccCCCcccccCCCCchHHHHHHHHHhc--CCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCc
Q 044617          139 TLSHHGCNLCPSNLCKGFVLDHVCTSF--GCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP  201 (265)
Q Consensus       139 ~~kp~~~~~~~~~~~K~~~i~~~~~~~--gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~  201 (265)
                      ..||           -+..++.+.+.+  |++|++++||||+..|+.+|+++|.. ++.+.+|+.
T Consensus       109 ~~kp-----------~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~-~i~v~~g~~  161 (174)
T TIGR01685       109 KAKQ-----------LEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVT-SCYCPSGMD  161 (174)
T ss_pred             hHHH-----------HHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCE-EEEcCCCcc
Confidence            0111           245556666666  79999999999999999999886664 344445433

This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.

>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Probab=99.69  E-value=4.6e-17  Score=125.46  Aligned_cols=84  Identities=15%  Similarity=0.235  Sum_probs=71.7

Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                      .|++|+++|++++|+||+....+...++++|+..+|+.                  .     +|           |+..+
T Consensus        36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~~------------------~-----~~-----------k~~~~   81 (154)
T TIGR01670        36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQG------------------Q-----SN-----------KLIAF   81 (154)
T ss_pred             HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEec------------------c-----cc-----------hHHHH
Confidence            89999999999999999999999999999998755431                  0     12           89999


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      .++++++|+++++++||||+.||+.+++.++. +++++.
T Consensus        82 ~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~-~~~v~~  119 (154)
T TIGR01670        82 SDILEKLALAPENVAYIGDDLIDWPVMEKVGL-SVAVAD  119 (154)
T ss_pred             HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC-eEecCC
Confidence            99999999999999999999999999977665 355543

The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.

>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544

Probab=99.68  E-value=5.5e-15  Score=122.67  Aligned_cols=122  Identities=16%  Similarity=0.139  Sum_probs=99.7

Q ss_pred             hCCCCHHHHHHHhc--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEE
Q 044617           55 SQGKTVEDIANCLR--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRI  132 (265)
Q Consensus        55 ~~~~~~~~~~~~~~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~  132 (265)
                      ..+.+.+.+...+.  ...+.||+.++++.|+++|++++|+|++....++.+++.+|+...+..+++|...++++|..+.
T Consensus       103 ~~~~~~e~i~~~v~~~~l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG  182 (277)
T TIGR01544       103 QQAFPKAKIKEIVAESDVMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKG  182 (277)
T ss_pred             cCCCCHHHHHHHHhhcCCccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeC
Confidence            33567788888775  7899999999999999999999999999999999999999997778899999999987777664


Q ss_pred             eeccccccCCCcccccCCCCchHHHHH-HHHHhcC--CCCceEEEEcCCCCCcccccC
Q 044617          133 LPYHDSTLSHHGCNLCPSNLCKGFVLD-HVCTSFG--CGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       133 ~~~~~~~~kp~~~~~~~~~~~K~~~i~-~~~~~~g--i~~~~~v~vGD~~~Di~~a~~  187 (265)
                      .+.+.           ....+|...+. .+.+.++  .++++++++|||.+|+.||..
T Consensus       183 ~~~P~-----------i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g  229 (277)
T TIGR01544       183 FKGPL-----------IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADG  229 (277)
T ss_pred             CCCCc-----------ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcC
Confidence            32211           01234665554 6888888  889999999999999999953

This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.

>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]

Probab=99.67  E-value=1e-15  Score=128.48  Aligned_cols=172  Identities=17%  Similarity=0.227  Sum_probs=116.7

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI   80 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l   80 (265)
                      |++|+|+|||||||++++.                                                   .+.+.+++.|
T Consensus         1 ~~~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~al   29 (264)
T COG0561           1 MMIKLLAFDLDGTLLDSNK---------------------------------------------------TISPETKEAL   29 (264)
T ss_pred             CCeeEEEEcCCCCccCCCC---------------------------------------------------ccCHHHHHHH
Confidence            7899999999999999943                                                   4788999999


Q ss_pred             HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecC----------------------------------
Q 044617           81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDE----------------------------------  126 (265)
Q Consensus        81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~----------------------------------  126 (265)
                      ++++++|++++|+|++....+..+++.+++..+  .|..|...+-.                                  
T Consensus        30 ~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~--~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~  107 (264)
T COG0561          30 ARLREKGVKVVLATGRPLPDVLSILEELGLDGP--LITFNGALIYNGGELLFQKPLSREDVEELLELLEDFQGIALVLYT  107 (264)
T ss_pred             HHHHHCCCEEEEECCCChHHHHHHHHHcCCCcc--EEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHHhccCceEEEEe
Confidence            999999999999999999999999999988653  11111111000                                  


Q ss_pred             CC-c----------------------------------eEEe--------------------eccccccCCCcccccCCC
Q 044617          127 QG-R----------------------------------LRIL--------------------PYHDSTLSHHGCNLCPSN  151 (265)
Q Consensus       127 ~~-~----------------------------------~~~~--------------------~~~~~~~kp~~~~~~~~~  151 (265)
                      .. .                                  ....                    ......+.+..+++.+.|
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g  187 (264)
T COG0561         108 DDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPKG  187 (264)
T ss_pred             ccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecCC
Confidence            00 0                                  0000                    000001122236778999


Q ss_pred             CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHH
Q 044617          152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILL  231 (265)
Q Consensus       152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~  231 (265)
                      .+|+.+++.+++++|++++++++|||+.||+.|.+   .++..++-.+.  ...+++..   + .+..-++.+-+...|+
T Consensus       188 ~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~---~ag~gvam~Na--~~~~k~~A---~-~vt~~n~~~Gv~~~l~  258 (264)
T COG0561         188 VSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLE---VAGLGVAMGNA--DEELKELA---D-YVTTSNDEDGVAEALE  258 (264)
T ss_pred             CchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHH---hcCeeeeccCC--CHHHHhhC---C-cccCCccchHHHHHHH
Confidence            99999999999999999999999999999999994   45555554432  12232211   1 1222244555888888


Q ss_pred             HHH
Q 044617          232 HLI  234 (265)
Q Consensus       232 ~~~  234 (265)
                      +++
T Consensus       259 ~~~  261 (264)
T COG0561         259 KLL  261 (264)
T ss_pred             HHh
Confidence            775

>PRK01158 phosphoglycolate phosphatase; Provisional

Probab=99.67  E-value=1.1e-15  Score=125.69  Aligned_cols=141  Identities=19%  Similarity=0.225  Sum_probs=98.2

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI   80 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l   80 (265)
                      |++|+|+||+||||++++                                                   ..+.|.+.+.|
T Consensus         1 m~~kli~~DlDGTLl~~~---------------------------------------------------~~i~~~~~~al   29 (230)
T PRK01158          1 MKIKAIAIDIDGTITDKD---------------------------------------------------RRLSLKAVEAI   29 (230)
T ss_pred             CceeEEEEecCCCcCCCC---------------------------------------------------CccCHHHHHHH
Confidence            778999999999999873                                                   24678888999


Q ss_pred             HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCcee-cC-CCc---------------------------eE
Q 044617           81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYV-DE-QGR---------------------------LR  131 (265)
Q Consensus        81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~-d~-~~~---------------------------~~  131 (265)
                      ++++++|++++++|++....+..+++.+++..+  .+..+...+ +. .+.                           +.
T Consensus        30 ~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~--~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (230)
T PRK01158         30 RKAEKLGIPVILATGNVLCFARAAAKLIGTSGP--VIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFPEASTSLT  107 (230)
T ss_pred             HHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCc--EEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhccccceeee
Confidence            999999999999999998888888888887643  222222111 00 000                           00


Q ss_pred             ------------E-eec---------------cccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcc
Q 044617          132 ------------I-LPY---------------HDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFC  183 (265)
Q Consensus       132 ------------~-~~~---------------~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~  183 (265)
                                  + ...               ..........++.+.+.+|+.+++.+++.+|++++++++|||+.||+.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~GD~~NDi~  187 (230)
T PRK01158        108 KLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIGDSENDLE  187 (230)
T ss_pred             cCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHH
Confidence                        0 000               000000111255688999999999999999999999999999999999


Q ss_pred             cccCCCCCCeeeec
Q 044617          184 PTLKLRDCDFVMPR  197 (265)
Q Consensus       184 ~a~~~~~~~~~~~~  197 (265)
                      |++.   +++.++-
T Consensus       188 m~~~---ag~~vam  198 (230)
T PRK01158        188 MFEV---AGFGVAV  198 (230)
T ss_pred             HHHh---cCceEEe
Confidence            9955   4444443

>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC

Probab=99.67  E-value=2.2e-16  Score=117.81  Aligned_cols=86  Identities=9%  Similarity=0.097  Sum_probs=74.4

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCC-CHHHHHHHHHhcC-------cccccceEEecCceecCCCceEEeeccccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDA-NQFYIETIMEHHG-------LLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~-~~~~i~~~l~~~g-------l~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                      .++||+.++|+.|+++|++++|+||+ ...++...++.++       +.++|+.+++.+             .     +|
T Consensus        29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f~~~~~~~-------------~-----~p   90 (128)
T TIGR01681        29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYFDPLTIGY-------------W-----LP   90 (128)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhhhhhhhcC-------------C-----Cc
Confidence            67999999999999999999999999 8888889889888       677777666531             1     13


Q ss_pred             CcccccCCCCchHHHHHHHHHhcC--CCCceEEEEcCCCCCcccc
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFG--CGKQRFIYLGDGRGDFCPT  185 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~g--i~~~~~v~vGD~~~Di~~a  185 (265)
                                 |+..+..+++++|  +.|++++||||+..|+...
T Consensus        91 -----------kp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~  124 (128)
T TIGR01681        91 -----------KSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEV  124 (128)
T ss_pred             -----------HHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHH
Confidence                       8999999999999  9999999999999997655

No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.

>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional

Probab=99.65  E-value=2.3e-15  Score=126.95  Aligned_cols=83  Identities=14%  Similarity=0.148  Sum_probs=57.6

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeE-EEEeCCCH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKA-KVHEWSSA  223 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  223 (265)
                      +++.+.+.+|+.+++.+++.+|++++++++|||+.||+.|.+.   +++.++-.+ +. ..+++.   ++. .+..-++.
T Consensus       180 ~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~---ag~~vAm~N-a~-~~vK~~---A~~~~v~~~n~e  251 (272)
T PRK15126        180 LEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGS---VGRGFIMGN-AM-PQLRAE---LPHLPVIGHCRN  251 (272)
T ss_pred             EEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHH---cCCceeccC-Ch-HHHHHh---CCCCeecCCCcc
Confidence            4677999999999999999999999999999999999999954   444444332 11 223321   111 12222334


Q ss_pred             HHHHHHHHHHHH
Q 044617          224 EELKKILLHLIG  235 (265)
Q Consensus       224 ~el~~~l~~~~~  235 (265)
                      .-+...|++++.
T Consensus       252 dGva~~l~~~~~  263 (272)
T PRK15126        252 QAVSHYLTHWLD  263 (272)
T ss_pred             hHHHHHHHHHhc
Confidence            448888988874

>cd01427 HAD_like Haloacid dehalogenase-like hydrolases

Probab=99.65  E-value=3.2e-16  Score=117.56  Aligned_cols=118  Identities=14%  Similarity=0.094  Sum_probs=88.0

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ....+++++.++|+.|+++|++++++|++....+...++.+++...++.+++............         .+.....
T Consensus        21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---------~~~~~~~   91 (139)
T cd01427          21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEG---------LFLGGGP   91 (139)
T ss_pred             ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhccccc---------ccccccc
Confidence            3578899999999999999999999999999999999999998777777776532211000000         0000111


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCee
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFV  194 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~  194 (265)
                      +..+..|+..+..+++.++..++++++|||+.+|+.++++++..+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~  138 (139)
T cd01427          92 FDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA  138 (139)
T ss_pred             cccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence            12234489999999999999999999999999999999876655443

The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.

>PRK10513 sugar phosphate phosphatase; Provisional

Probab=99.65  E-value=2.2e-15  Score=126.93  Aligned_cols=81  Identities=9%  Similarity=0.111  Sum_probs=55.4

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      +++.+.|.+|+.+++.+++.+|++++++++|||+.||+.|.+.   +++.++-.+ +. ..+++.   ++... .-++..
T Consensus       188 ~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~---ag~~vAm~N-A~-~~vK~~---A~~vt-~~n~~d  258 (270)
T PRK10513        188 LEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEY---AGVGVAMGN-AI-PSVKEV---AQFVT-KSNLED  258 (270)
T ss_pred             EEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHh---CCceEEecC-cc-HHHHHh---cCeec-cCCCcc
Confidence            4677899999999999999999999999999999999999954   444444332 11 223321   12221 113333


Q ss_pred             HHHHHHHHHH
Q 044617          225 ELKKILLHLI  234 (265)
Q Consensus       225 el~~~l~~~~  234 (265)
                      -+...|++++
T Consensus       259 Gva~~i~~~~  268 (270)
T PRK10513        259 GVAFAIEKYV  268 (270)
T ss_pred             hHHHHHHHHh
Confidence            3888887765

>PRK11590 hypothetical protein; Provisional

Probab=99.64  E-value=2.6e-15  Score=121.87  Aligned_cols=100  Identities=12%  Similarity=-0.020  Sum_probs=72.2

Q ss_pred             CCCChhHHHHH-HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           70 CPLDSHVAAAI-KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        70 ~~~~~g~~e~l-~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ..++||+.++| +.++++|++++|+||+...+++.+++.+|+.. .+.+++++..+.-.|.+..          .+    
T Consensus        94 ~~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~l~~~~tg~~~g----------~~----  158 (211)
T PRK11590         94 VTAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQMQRRYGGWVLT----------LR----  158 (211)
T ss_pred             CcCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEEEEEEEccEECC----------cc----
Confidence            56799999999 67888999999999999999999999999632 3466776543321222110          01    


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                      ..|..|...+++++   +.+...++++|||.+|+.+...
T Consensus       159 c~g~~K~~~l~~~~---~~~~~~~~aY~Ds~~D~pmL~~  194 (211)
T PRK11590        159 CLGHEKVAQLERKI---GTPLRLYSGYSDSKQDNPLLYF  194 (211)
T ss_pred             CCChHHHHHHHHHh---CCCcceEEEecCCcccHHHHHh
Confidence            12444666666665   4566788999999999999844

>PRK10976 putative hydrolase; Provisional

Probab=99.63  E-value=8e-15  Score=123.21  Aligned_cols=82  Identities=18%  Similarity=0.227  Sum_probs=56.3

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeE-EEEeCCCH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKA-KVHEWSSA  223 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  223 (265)
                      +++.+.+.+|+.+++.+++.+|++++++++|||+.||+.|.+.+| .++++.+.   . ..+++.   +++ .+..-++.
T Consensus       182 ~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag-~~vAm~NA---~-~~vK~~---A~~~~v~~~n~e  253 (266)
T PRK10976        182 LEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAG-KGCIMGNA---H-QRLKDL---LPELEVIGSNAD  253 (266)
T ss_pred             EEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcC-CCeeecCC---c-HHHHHh---CCCCeecccCch
Confidence            467789999999999999999999999999999999999996533 24444433   1 223321   121 12221333


Q ss_pred             HHHHHHHHHHH
Q 044617          224 EELKKILLHLI  234 (265)
Q Consensus       224 ~el~~~l~~~~  234 (265)
                      .-+...|++++
T Consensus       254 dGVa~~l~~~~  264 (266)
T PRK10976        254 DAVPHYLRKLY  264 (266)
T ss_pred             HHHHHHHHHHh
Confidence            34888888765

>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB

Probab=99.62  E-value=1.2e-14  Score=117.62  Aligned_cols=100  Identities=12%  Similarity=0.022  Sum_probs=72.8

Q ss_pred             CCCChhHHHHHH-HHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           70 CPLDSHVAAAIK-SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        70 ~~~~~g~~e~l~-~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ..++|++.++|+ .++++|++++||||+...+++++++..++.. .+.+++++..+.+.|.+..         + +    
T Consensus        93 ~~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~-~~~~i~t~le~~~gg~~~g---------~-~----  157 (210)
T TIGR01545        93 VTAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIH-RLNLIASQIERGNGGWVLP---------L-R----  157 (210)
T ss_pred             CCCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccc-cCcEEEEEeEEeCCceEcC---------c-c----
Confidence            367999999995 7888999999999999999999998866533 2356787665543333211         0 1    


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                      ..|..|...+++++   +.+.+.++++|||.+|+.+...
T Consensus       158 c~g~~Kv~rl~~~~---~~~~~~~~aYsDS~~D~pmL~~  193 (210)
T TIGR01545       158 CLGHEKVAQLEQKI---GSPLKLYSGYSDSKQDNPLLAF  193 (210)
T ss_pred             CCChHHHHHHHHHh---CCChhheEEecCCcccHHHHHh
Confidence            22445777777666   3466788999999999999843

The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.

>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional

Probab=99.62  E-value=2.1e-15  Score=129.94  Aligned_cols=109  Identities=16%  Similarity=0.191  Sum_probs=83.2

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCC---------------CHHHHHHHHHhcCcccccceEEecCceecCCCceEE
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDA---------------NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRI  132 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~---------------~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~  132 (265)
                      ....++||+.++|++|+++|++++|+||+               ....+..+++.+++.  |+.++.......       
T Consensus        27 ~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~--fd~i~i~~~~~s-------   97 (354)
T PRK05446         27 DKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIK--FDEVLICPHFPE-------   97 (354)
T ss_pred             ccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCc--eeeEEEeCCcCc-------
Confidence            35788999999999999999999999995               244566677888874  655543210000       


Q ss_pred             eeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          133 LPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       133 ~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                        .....+||           ++.++..+++++++++++++||||+.+|+.+|+++|...+++...
T Consensus        98 --d~~~~rKP-----------~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I~v~~~  150 (354)
T PRK05446         98 --DNCSCRKP-----------KTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGIRYARE  150 (354)
T ss_pred             --ccCCCCCC-----------CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEEEEECC
Confidence              01112355           899999999999999999999999999999999988877777544

>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase

Probab=99.60  E-value=1.1e-14  Score=118.11  Aligned_cols=104  Identities=16%  Similarity=0.168  Sum_probs=87.7

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc---CcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH---GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~---gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                      ...++||+.++|++|+++|++++|+||+........+++.   ++..+|+.++..              ..  -.||   
T Consensus        93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~~fd~--------------~~--g~KP---  153 (220)
T TIGR01691        93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSGYFDT--------------TV--GLKT---  153 (220)
T ss_pred             ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcceEEEe--------------Cc--ccCC---
Confidence            4578999999999999999999999999999888888775   566667665532              00  1255   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN  199 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~  199 (265)
                              ++..+.++++++|++|++++||||+..|+.+|+++|+..+.+.+.|
T Consensus       154 --------~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~v~r~g  199 (220)
T TIGR01691       154 --------EAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQLVRPG  199 (220)
T ss_pred             --------CHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEEEECCC
Confidence                    8999999999999999999999999999999999998888777765

This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.

>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=99.60  E-value=2.4e-14  Score=115.72  Aligned_cols=103  Identities=12%  Similarity=0.135  Sum_probs=88.2

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      ..+.+++.++++.||+.|..++++||.... .+.++..+++..+||.++.+              ...+..||       
T Consensus       112 ~~~~~~~~~~lq~lR~~g~~l~iisN~d~r-~~~~l~~~~l~~~fD~vv~S--------------~e~g~~KP-------  169 (237)
T KOG3085|consen  112 WKYLDGMQELLQKLRKKGTILGIISNFDDR-LRLLLLPLGLSAYFDFVVES--------------CEVGLEKP-------  169 (237)
T ss_pred             ceeccHHHHHHHHHHhCCeEEEEecCCcHH-HHHHhhccCHHHhhhhhhhh--------------hhhccCCC-------
Confidence            355678889999999999999999988655 44888899999999988763              44455677       


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecC
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~  198 (265)
                          .|.+++.+++++++.|++|++|||. .||+++|+++|+..+.+.+.
T Consensus       170 ----Dp~If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~  215 (237)
T KOG3085|consen  170 ----DPRIFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNS  215 (237)
T ss_pred             ----ChHHHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccc
Confidence                8999999999999999999999999 59999999999988887754

>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional

Probab=99.60  E-value=2.5e-14  Score=120.55  Aligned_cols=80  Identities=9%  Similarity=0.072  Sum_probs=55.3

Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                      ++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.+|   +.++-. .+... ++..   ++... .-++..-
T Consensus       192 ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag---~~vamg-na~~~-lk~~---Ad~v~-~~n~~dG  262 (272)
T PRK10530        192 DIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAG---LGVAMG-NADDA-VKAR---ADLVI-GDNTTPS  262 (272)
T ss_pred             EEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcC---ceEEec-CchHH-HHHh---CCEEE-ecCCCCc
Confidence            56688899999999999999999999999999999999996644   344432 22222 3322   22322 2233334


Q ss_pred             HHHHHHHHH
Q 044617          226 LKKILLHLI  234 (265)
Q Consensus       226 l~~~l~~~~  234 (265)
                      +...|++++
T Consensus       263 v~~~l~~~~  271 (272)
T PRK10530        263 IAEFIYSHV  271 (272)
T ss_pred             HHHHHHHHh
Confidence            888777664

>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional

Probab=99.59  E-value=2.5e-15  Score=119.14  Aligned_cols=80  Identities=15%  Similarity=0.217  Sum_probs=68.6

Q ss_pred             HHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHH
Q 044617           78 AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFV  157 (265)
Q Consensus        78 e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~  157 (265)
                      ..++.|+++|++++|+||+....+..+++.+|+..+|.   +.                               ..|+..
T Consensus        55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f~---g~-------------------------------~~k~~~  100 (183)
T PRK09484         55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLYQ---GQ-------------------------------SNKLIA  100 (183)
T ss_pred             HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceeec---CC-------------------------------CcHHHH
Confidence            36777888999999999999999999999999865543   10                               128999


Q ss_pred             HHHHHHhcCCCCceEEEEcCCCCCcccccCCCCC
Q 044617          158 LDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDC  191 (265)
Q Consensus       158 i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~  191 (265)
                      ++.+++++|+++++++||||+.+|+.+++++|..
T Consensus       101 l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~  134 (183)
T PRK09484        101 FSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLS  134 (183)
T ss_pred             HHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence            9999999999999999999999999999876654

>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Probab=99.59  E-value=8.4e-15  Score=114.73  Aligned_cols=94  Identities=13%  Similarity=0.134  Sum_probs=76.9

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCC-HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDAN-QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~-~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ..++|++.++|+.|+++|++++|+||+. ...+..+++.+++..+     .                  ...||      
T Consensus        42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~-----~------------------~~~KP------   92 (170)
T TIGR01668        42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVL-----P------------------HAVKP------   92 (170)
T ss_pred             CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEE-----c------------------CCCCC------
Confidence            4678999999999999999999999998 5667777777775321     1                  01255      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeec
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~  197 (265)
                           ++..+..+++++++++++++||||+. .|+.+|+++|...+.+..
T Consensus        93 -----~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~  137 (170)
T TIGR01668        93 -----PGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEP  137 (170)
T ss_pred             -----ChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEcc
Confidence                 78999999999999999999999998 799999998887665543

This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.

>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.56  E-value=1.4e-13  Score=116.17  Aligned_cols=62  Identities=21%  Similarity=0.243  Sum_probs=53.9

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI   80 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l   80 (265)
                      ||+|+|++|+||||++++.                                                   .+.+++.++|
T Consensus         2 ~~~kli~~DlDGTLl~~~~---------------------------------------------------~~~~~~~~ai   30 (273)
T PRK00192          2 MMKLLVFTDLDGTLLDHHT---------------------------------------------------YSYEPAKPAL   30 (273)
T ss_pred             CcceEEEEcCcccCcCCCC---------------------------------------------------cCcHHHHHHH
Confidence            7899999999999998722                                                   3467889999


Q ss_pred             HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccc
Q 044617           81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGC  113 (265)
Q Consensus        81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~  113 (265)
                      +.|+++|++++++||+....+...++.+++..+
T Consensus        31 ~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~   63 (273)
T PRK00192         31 KALKEKGIPVIPCTSKTAAEVEVLRKELGLEDP   63 (273)
T ss_pred             HHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC
Confidence            999999999999999999999999999887654

>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal

Probab=99.56  E-value=3.3e-14  Score=115.78  Aligned_cols=122  Identities=14%  Similarity=0.159  Sum_probs=82.2

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCcee-cCCCce-------------------
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYV-DEQGRL-------------------  130 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~-d~~~~~-------------------  130 (265)
                      .+.+...+.|++|+++|++++++|++....+..+++.+++..+  .|..+...+ +..+..                   
T Consensus        18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~--~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (215)
T TIGR01487        18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGP--VVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRF   95 (215)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCc--EEEccCcEEEeCCCcEEEecccchhhHHHhhhhhh
Confidence            5678899999999999999999999999989888888887543  222222111 000000                   


Q ss_pred             -----------E---Eeeccc---------------cccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCC
Q 044617          131 -----------R---ILPYHD---------------STLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGD  181 (265)
Q Consensus       131 -----------~---~~~~~~---------------~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~D  181 (265)
                                 .   +.....               ....+...+.++.+.+|+.+++.+++++|++++++++|||+.||
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND  175 (215)
T TIGR01487        96 PRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSEND  175 (215)
T ss_pred             hhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHH
Confidence                       0   000000               00001122455789999999999999999999999999999999


Q ss_pred             cccccCCCCCCeeeec
Q 044617          182 FCPTLKLRDCDFVMPR  197 (265)
Q Consensus       182 i~~a~~~~~~~~~~~~  197 (265)
                      +.|++.   +++.++-
T Consensus       176 ~~ml~~---ag~~vam  188 (215)
T TIGR01487       176 IDLFRV---VGFKVAV  188 (215)
T ss_pred             HHHHHh---CCCeEEc
Confidence            999954   4444443

TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.

>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit

Probab=99.55  E-value=1.7e-15  Score=117.86  Aligned_cols=88  Identities=11%  Similarity=0.148  Sum_probs=72.2

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      ....+.  -|..|+++|++++|+||+....+...++.+|+..+|+.+                       ||        
T Consensus        36 ~~~D~~--~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~~-----------------------kp--------   82 (169)
T TIGR02726        36 DIKDGM--GVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEGI-----------------------KK--------   82 (169)
T ss_pred             ecchHH--HHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEecC-----------------------CC--------
Confidence            334444  677888999999999999999999999999997665421                       23        


Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                         |+..++.++++++++++++++|||+.||+.+++.   +++.++-
T Consensus        83 ---kp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~---ag~~~am  123 (169)
T TIGR02726        83 ---KTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKR---VGLAVAV  123 (169)
T ss_pred             ---CHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHH---CCCeEEC
Confidence               8999999999999999999999999999999965   4444443

Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.

>PLN02887 hydrolase family protein

Probab=99.55  E-value=7.3e-14  Score=127.69  Aligned_cols=80  Identities=11%  Similarity=0.191  Sum_probs=54.9

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .++++.|++|+.+++.+++.+|++++++++|||+.||+.|.+.   +++.++-.+. . ..+++.   ++. +..-++.+
T Consensus       499 lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~---AG~gVAMgNA-~-eeVK~~---Ad~-VT~sNdED  569 (580)
T PLN02887        499 LEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQL---ASLGVALSNG-A-EKTKAV---ADV-IGVSNDED  569 (580)
T ss_pred             EEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHH---CCCEEEeCCC-C-HHHHHh---CCE-EeCCCCcC
Confidence            4677899999999999999999999999999999999999954   4444443321 1 223322   222 22213333


Q ss_pred             HHHHHHHHH
Q 044617          225 ELKKILLHL  233 (265)
Q Consensus       225 el~~~l~~~  233 (265)
                      -+...|+++
T Consensus       570 GVA~aLek~  578 (580)
T PLN02887        570 GVADAIYRY  578 (580)
T ss_pred             HHHHHHHHh
Confidence            377777765

>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily

Probab=99.52  E-value=1.2e-13  Score=113.23  Aligned_cols=122  Identities=16%  Similarity=0.171  Sum_probs=80.5

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCcee-cCC----------------------
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYV-DEQ----------------------  127 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~-d~~----------------------  127 (265)
                      .+.+...+.|++++++|++++++|++....+..+++.+++..+  .|..+...+ +..                      
T Consensus        15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~--~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (225)
T TIGR01482        15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDP--VIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAK   92 (225)
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCe--EEEecCcEEEeCCCCceEEecccCHHHHHHHHHhc
Confidence            4567788888889999999999999888888888887775433  111111100 000                      


Q ss_pred             ---------------CceEEeeccc---------c-------ccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEc
Q 044617          128 ---------------GRLRILPYHD---------S-------TLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLG  176 (265)
Q Consensus       128 ---------------~~~~~~~~~~---------~-------~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vG  176 (265)
                                     ....+.....         .       ...+..+++++.+.+|+.+++++++++|++++++++||
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~G  172 (225)
T TIGR01482        93 TFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCG  172 (225)
T ss_pred             ccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEEC
Confidence                           0000000000         0       00122336678899999999999999999999999999


Q ss_pred             CCCCCcccccCCCCCCeeeec
Q 044617          177 DGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       177 D~~~Di~~a~~~~~~~~~~~~  197 (265)
                      |+.||+.|++.   +++.++-
T Consensus       173 D~~NDi~m~~~---ag~~vam  190 (225)
T TIGR01482       173 DSENDIDLFEV---PGFGVAV  190 (225)
T ss_pred             CCHhhHHHHHh---cCceEEc
Confidence            99999999955   4444443

catalyze the same reaction as SPP.

>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]

Probab=99.51  E-value=1.4e-13  Score=103.62  Aligned_cols=94  Identities=13%  Similarity=0.126  Sum_probs=81.9

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      ....|++++.+..+++.|++++|+||+...-+...++.+|+.    .++.+                   .||       
T Consensus        45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~----fi~~A-------------------~KP-------   94 (175)
T COG2179          45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVP----FIYRA-------------------KKP-------   94 (175)
T ss_pred             CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCc----eeecc-------------------cCc-------
Confidence            456799999999999999999999999999999999999964    44442                   245       


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeec
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~  197 (265)
                          -+..+.++++++++++++|+||||.. +|+.+++++|+.++.+..
T Consensus        95 ----~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P  139 (175)
T COG2179          95 ----FGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP  139 (175)
T ss_pred             ----cHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence                57899999999999999999999995 999999999988877764

>smart00577 CPDc catalytic domain of ctd-like phosphatases

Probab=99.51  E-value=2.2e-14  Score=109.86  Aligned_cols=98  Identities=10%  Similarity=0.011  Sum_probs=77.5

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-ccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++|++|+ ++++++|+|++...+++.+++++++.. +|+.+++.+..                        
T Consensus        43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~i~~~~d~------------------------   97 (148)
T smart00577       43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYRRLFRDEC------------------------   97 (148)
T ss_pred             EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeeeEEECccc------------------------
Confidence            4577999999999999 479999999999999999999999865 45777774210                        


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                         ...||. +.+.++++|++|++|++|||+.+|+.++++   +++.+-.+
T Consensus        98 ---~~~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~---ngI~i~~f  141 (148)
T smart00577       98 ---VFVKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPE---NLIPIKPW  141 (148)
T ss_pred             ---cccCCe-EeecHHHcCCChhcEEEEECCHHHhhcCcc---CEEEecCc
Confidence               011444 778889999999999999999999999844   44444443

>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]

Probab=99.51  E-value=4.7e-13  Score=104.85  Aligned_cols=174  Identities=13%  Similarity=0.143  Sum_probs=117.7

Q ss_pred             ceEEEEecCCCCCCCCch----------HHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCC--CCHHHHHHHhc--
Q 044617            3 DVVVVFDFDRTLIDDDSD----------NWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQG--KTVEDIANCLR--   68 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--   68 (265)
                      ++.++||+|.||...++.          .++.+++|+++.-...+....+..+.-.+.. +...+  ...+++.++++  
T Consensus        15 ~~~l~FDiDdtLYp~St~i~~~~~~nI~~f~~eklgi~~e~a~~L~~~~yk~YG~t~aG-L~~~~~~~d~deY~~~V~~~   93 (244)
T KOG3109|consen   15 YKCLFFDIDDTLYPLSTGIQLMMRNNIQEFFVEKLGISEEEAEELRESLYKEYGLTMAG-LKAVGYIFDADEYHRFVHGR   93 (244)
T ss_pred             ceEEEEecccccccCchhHHHHHHHHHHHHHHHHhCCChhhhHHHHHHHHHHHhHHHHH-HHHhcccCCHHHHHHHhhcc
Confidence            578999999999997652          4455666665432221111111111111111 11111  12344444432  


Q ss_pred             ----CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           69 ----QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        69 ----~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                          .+.+.+-.+++|-.|+.++  ..+.||+....+.++++.+|++++|+.+++.+..-..        .....-||  
T Consensus        94 LPlq~LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~--------~~~~vcKP--  161 (244)
T KOG3109|consen   94 LPLQDLKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI--------EKTVVCKP--  161 (244)
T ss_pred             CcHhhcCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC--------CCceeecC--
Confidence                3566778889999998874  8889999999999999999999999999985321100        01111123  


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCC-CceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                               .+.+++.+++..|++ |.++++|.||.+.++.|++.|+.++++...
T Consensus       162 ---------~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tvlv~~~  207 (244)
T KOG3109|consen  162 ---------SEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTVLVGRE  207 (244)
T ss_pred             ---------CHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeEEEEee
Confidence                     469999999999998 999999999999999999999988887754

>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []

Probab=99.51  E-value=1.6e-13  Score=113.63  Aligned_cols=123  Identities=18%  Similarity=0.258  Sum_probs=88.5

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCcee-cCCCc--------------------
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYV-DEQGR--------------------  129 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~-d~~~~--------------------  129 (265)
                      .+.+...+.|+.++++|++++++|++....+..++..+++..+  .|..+...+ ...+.                    
T Consensus        15 ~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~--~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~   92 (254)
T PF08282_consen   15 KISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDY--FICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK   92 (254)
T ss_dssp             SSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSE--EEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred             eeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhh--hcccccceeeecccccchhhheeccchhheeehhh
Confidence            4779999999999999999999999999999999999887633  333333332 11000                    


Q ss_pred             -------------------------------------------------eEEe----------------ec-----cccc
Q 044617          130 -------------------------------------------------LRIL----------------PY-----HDST  139 (265)
Q Consensus       130 -------------------------------------------------~~~~----------------~~-----~~~~  139 (265)
                                                                       ..+.                ..     ....
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~  172 (254)
T PF08282_consen   93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR  172 (254)
T ss_dssp             HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred             hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence                                                             0000                00     0001


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      ..+...++.+.+.+|..+++.+++.+|++++++++|||+.||+.|.+.   ++..++-.
T Consensus       173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~---~~~~~am~  228 (254)
T PF08282_consen  173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLEL---AGYSVAMG  228 (254)
T ss_dssp             EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHH---SSEEEEET
T ss_pred             ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhh---cCeEEEEc
Confidence            123334667999999999999999999999999999999999999954   55555543

This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....

>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]

Probab=99.51  E-value=1.5e-13  Score=110.73  Aligned_cols=171  Identities=11%  Similarity=0.110  Sum_probs=115.2

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccCC--hhHHHHHHHHHHHhCCCCHHHH--------HHHh
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTLP--WNSLMDRMMKELHSQGKTVEDI--------ANCL   67 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--------~~~~   67 (265)
                      .-+++||+||||+|++..     ..++.+.+.+.........++  -.+....+...+ ....+.+++        .+.+
T Consensus        10 ~~~~lfD~dG~lvdte~~y~~~~~~~~~~ygk~~~~~~~~~~mG~~~~eaa~~~~~~~-~dp~s~ee~~~e~~~~~~~~~   88 (222)
T KOG2914|consen   10 VSACLFDMDGTLVDTEDLYTEAWQELLDRYGKPYPWDVKVKSMGKRTSEAARLFVKKL-PDPVSREEFNKEEEEILDRLF   88 (222)
T ss_pred             eeeEEEecCCcEEecHHHHHHHHHHHHHHcCCCChHHHHHHHcCCCHHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHhc
Confidence            457999999999999753     445555565322111111121  122222222111 112222222        2344


Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcC-cccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHG-LLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~g-l~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      ....+.||+.+++..|+.+|++++++|+...........+++ +...|..++..    +  +      ......||    
T Consensus        89 ~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~----d--~------~~v~~gKP----  152 (222)
T KOG2914|consen   89 MNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLG----D--D------PEVKNGKP----  152 (222)
T ss_pred             cccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeec----C--C------ccccCCCC----
Confidence            577889999999999999999999999998888888777776 65556654441    1  0      11112245    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCC-ceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGK-QRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~-~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                             .|.++..+++.+|.++ +.+++++|+.+.+++|+++|+..+.++.
T Consensus       153 -------~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~v~~  197 (222)
T KOG2914|consen  153 -------DPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVGVAT  197 (222)
T ss_pred             -------CchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEEecC
Confidence                   8999999999999888 9999999999999999998887777776

>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]

Probab=99.51  E-value=9.9e-14  Score=107.75  Aligned_cols=108  Identities=16%  Similarity=0.148  Sum_probs=85.8

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCC---------------CHHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDA---------------NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~---------------~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...+.||+.+.+..|++.|++++++||.               .+.++...++..|..  |+.++..             
T Consensus        29 ~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~~~gv~--id~i~~C-------------   93 (181)
T COG0241          29 DFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILASQGVK--IDGILYC-------------   93 (181)
T ss_pred             HhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHHHcCCc--cceEEEC-------------
Confidence            5678999999999999999999999993               233466666777764  7777765             


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      |+++.       +.|.+...|+.+++.+++++++++++.++|||...|+++|.+++..++.+.++
T Consensus        94 ph~p~-------~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~~~~~~~~  151 (181)
T COG0241          94 PHHPE-------DNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIKGVLVLTG  151 (181)
T ss_pred             CCCCC-------CCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCCceEEEcC
Confidence            33321       12344455999999999999999999999999999999999999987777665

>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional

Probab=99.48  E-value=1.6e-13  Score=112.25  Aligned_cols=95  Identities=11%  Similarity=0.033  Sum_probs=71.8

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCC----CHHHHHHHHHhcCc--ccccceEEecCceecCCCceEEeeccccccCC
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDA----NQFYIETIMEHHGL--LGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~----~~~~i~~~l~~~gl--~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                      ...++||++++|+.|+++|++++++||+    ....++.+++.+|+  .++|+.+++.+.            .    .|+
T Consensus       112 ~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~------------~----~K~  175 (237)
T PRK11009        112 FSIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK------------P----GQY  175 (237)
T ss_pred             cCcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC------------C----CCC
Confidence            4578899999999999999999999995    45678888888999  788877776310            0    112


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                                .|..    +++++++    ++||||+.+|+.+|+++|...+.+..
T Consensus       176 ----------~K~~----~l~~~~i----~I~IGDs~~Di~aA~~AGi~~I~v~~  212 (237)
T PRK11009        176 ----------TKTQ----WLKKKNI----RIFYGDSDNDITAAREAGARGIRILR  212 (237)
T ss_pred             ----------CHHH----HHHhcCC----eEEEcCCHHHHHHHHHcCCcEEEEec
Confidence                      1333    4445654    89999999999999998887666654

>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.48  E-value=1.8e-12  Score=109.20  Aligned_cols=86  Identities=13%  Similarity=0.063  Sum_probs=57.3

Q ss_pred             cccCCCCchHHHHHHHHHhcCC---CCceEEEEcCCCCCcccccCCCCCCeeeecCCCc-hhhhhhcCCCeeeEEEEeCC
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGC---GKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP-LWDRICSNPMLIKAKVHEWS  221 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi---~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  221 (265)
                      ++++.+.+|+.+++.+++.+|+   +++++++|||+.||+.|.+   .+++.++-.+.. ....+......++ .+..-.
T Consensus       180 Ei~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~---~ag~gvAM~~~~~~~~~l~~~~~~~~-~~~~~~  255 (271)
T PRK03669        180 HVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLD---VMDYAVVVKGLNREGVHLQDDDPARV-YRTQRE  255 (271)
T ss_pred             EEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHH---hCCEEEEecCCCCCCcccccccCCce-EeccCC
Confidence            6678999999999999999999   9999999999999999994   455555544322 1111211111111 122234


Q ss_pred             CHHHHHHHHHHHHH
Q 044617          222 SAEELKKILLHLIG  235 (265)
Q Consensus       222 ~~~el~~~l~~~~~  235 (265)
                      ..+-+.+.|+.+++
T Consensus       256 ~~~g~~~~l~~~~~  269 (271)
T PRK03669        256 GPEGWREGLDHFFS  269 (271)
T ss_pred             CcHHHHHHHHHHHh
Confidence            44558887777764

>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B

Probab=99.46  E-value=2.2e-13  Score=108.63  Aligned_cols=96  Identities=21%  Similarity=0.191  Sum_probs=71.5

Q ss_pred             hhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCc-eEEeeccccccCCCcccccCCCC
Q 044617           74 SHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGR-LRILPYHDSTLSHHGCNLCPSNL  152 (265)
Q Consensus        74 ~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~-~~~~~~~~~~~kp~~~~~~~~~~  152 (265)
                      +++.++|+.++++|++++|+|++...+++.+++.+|+...  .+++++. .++.+. ........           ..+ 
T Consensus        92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~--~v~~~~~-~~~~~~~~~~~~~~~-----------~~~-  156 (192)
T PF12710_consen   92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD--NVIGNEL-FDNGGGIFTGRITGS-----------NCG-  156 (192)
T ss_dssp             TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG--GEEEEEE-ECTTCCEEEEEEEEE-----------EES-
T ss_pred             hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce--EEEEEee-eecccceeeeeECCC-----------CCC-
Confidence            5555999999999999999999999999999999998643  4777766 443321 11110100           012 


Q ss_pred             chHHHHHHH---HHhcCCCCceEEEEcCCCCCcccc
Q 044617          153 CKGFVLDHV---CTSFGCGKQRFIYLGDGRGDFCPT  185 (265)
Q Consensus       153 ~K~~~i~~~---~~~~gi~~~~~v~vGD~~~Di~~a  185 (265)
                      +|...++.+   ... +.+..++++||||.+|+.++
T Consensus       157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~l  191 (192)
T PF12710_consen  157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPML  191 (192)
T ss_dssp             HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHH
T ss_pred             cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHh
Confidence            499999999   555 77889999999999999876

>PHA02530 pseT polynucleotide kinase; Provisional

Probab=99.46  E-value=2e-13  Score=116.71  Aligned_cols=110  Identities=10%  Similarity=0.024  Sum_probs=87.2

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-ccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++|++.++|+.|+++|++++++||+........++.+++.. +|+.+++...    ... -.++.  ...||     
T Consensus       185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i~~~~~----~~~-~~~~~--~~~kp-----  252 (300)
T PHA02530        185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDLIGRPP----DMH-FQREQ--GDKRP-----  252 (300)
T ss_pred             cCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhhhCCcc----hhh-hcccC--CCCCC-----
Confidence            45789999999999999999999999999999999999999986 8888877531    000 00001  11245     


Q ss_pred             cCCCCchHHHHHHHHHhcCC-CCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          148 CPSNLCKGFVLDHVCTSFGC-GKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi-~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                            ++..++.++++++. ++++++||||+.+|+.+|+++|...+.+.
T Consensus       253 ------~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i~v~  296 (300)
T PHA02530        253 ------DDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECWQVA  296 (300)
T ss_pred             ------cHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEEEec
Confidence                  78999999999988 57999999999999999988777655553

>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein

Probab=99.45  E-value=9.3e-13  Score=107.64  Aligned_cols=49  Identities=16%  Similarity=0.230  Sum_probs=42.0

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                      .++.+.+.+|+.+++.+++++|++++++++|||+.||+.|.+   .+++.++
T Consensus       171 ~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~---~ag~~va  219 (221)
T TIGR02463       171 SHVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLE---VADYAVV  219 (221)
T ss_pred             eEEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHH---hCCceEE
Confidence            356688999999999999999999999999999999999994   4444443

This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.

>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase

Probab=99.45  E-value=5e-13  Score=120.66  Aligned_cols=92  Identities=14%  Similarity=0.140  Sum_probs=76.0

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCH------------HHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQ------------FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~------------~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                      ++||+.+.|+.|++.|++++|+||...            ..+..+++.+|+.  |+.+++.              .....
T Consensus       198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip--fdviia~--------------~~~~~  261 (526)
T TIGR01663       198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP--FQVFIAI--------------GAGFY  261 (526)
T ss_pred             cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc--eEEEEeC--------------CCCCC
Confidence            589999999999999999999999765            3578889999985  7766663              22334


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcC----CCCceEEEEcCCCCCcccccCCCC
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFG----CGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~g----i~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                      +||           ++.++..++++++    +++++++||||+..|+.+++++|.
T Consensus       262 RKP-----------~pGm~~~a~~~~~~~~~Id~~~S~~VGDaagr~~~g~~ag~  305 (526)
T TIGR01663       262 RKP-----------LTGMWDHLKEEANDGTEIQEDDCFFVGDAAGRPANGKAAGK  305 (526)
T ss_pred             CCC-----------CHHHHHHHHHhcCcccCCCHHHeEEeCCcccchHHHHhcCC
Confidence            577           8999999999985    899999999999999988765444

Note that the EC number for the kinase function is: 2.7.1.78

>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily

Probab=99.44  E-value=1.4e-12  Score=109.06  Aligned_cols=45  Identities=20%  Similarity=0.307  Sum_probs=40.8

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                      .++++.+.+|+.+++.+++.+|++++++++|||+.||+.|++.++
T Consensus       180 leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~  224 (256)
T TIGR00099       180 IEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAG  224 (256)
T ss_pred             EEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCC
Confidence            366789999999999999999999999999999999999996533

The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.

>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase)

Probab=99.44  E-value=1.8e-13  Score=111.04  Aligned_cols=89  Identities=13%  Similarity=0.197  Sum_probs=74.8

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      .+++|++.++|+.|++.|++++++|+.....+..+.+.+|+.+.  .+++.             ..    .||       
T Consensus       126 d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~--~v~a~-------------~~----~kP-------  179 (215)
T PF00702_consen  126 DPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS--IVFAR-------------VI----GKP-------  179 (215)
T ss_dssp             EEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE--EEEES-------------HE----TTT-------
T ss_pred             CcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc--ccccc-------------cc----ccc-------
Confidence            36789999999999999999999999999999999999998432  24442             00    234       


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCC
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKL  188 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~  188 (265)
                          .+.++.++++.+++++++++||||+.||+.|+++|
T Consensus       180 ----~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~A  214 (215)
T PF00702_consen  180 ----EPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAA  214 (215)
T ss_dssp             ----HHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHS
T ss_pred             ----cchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhC
Confidence                56788999999999999999999999999999764

This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....

>TIGR01686 FkbH FkbH-like domain

Probab=99.43  E-value=2.6e-13  Score=116.87  Aligned_cols=89  Identities=17%  Similarity=0.233  Sum_probs=79.3

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh----cCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH----HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~----~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      .+++|+.++|+.|+++|+.++|+|++....+..++++    +++.++|+.+.++              +     +|    
T Consensus        31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~~~~~--------------~-----~p----   87 (320)
T TIGR01686        31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDARSIN--------------W-----GP----   87 (320)
T ss_pred             ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeEEEEe--------------c-----Cc----
Confidence            4589999999999999999999999999999999999    8888888777653              1     24    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                             |+..+..+++++|+++++++||||+..|+.+++++.
T Consensus        88 -------k~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~l  123 (320)
T TIGR01686        88 -------KSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITL  123 (320)
T ss_pred             -------hHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHC
Confidence                   999999999999999999999999999999987633

The C-terminal portion of this domain is unique to this family (by BLAST).

>PLN02645 phosphoglycolate phosphatase

Probab=99.42  E-value=3.2e-12  Score=109.72  Aligned_cols=76  Identities=13%  Similarity=0.082  Sum_probs=56.4

Q ss_pred             CchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcC--CCeeeEEEEeCCCHHHHHH
Q 044617          152 LCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSN--PMLIKAKVHEWSSAEELKK  228 (265)
Q Consensus       152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~el~~  228 (265)
                      ..++.+++.+++++++++++++||||+. +|+.+|+++|...+++ .+|+.....+...  ...++..+   +++.||.+
T Consensus       230 KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV-~~G~~~~~~~~~~~~~~~pd~~~---~~~~~l~~  305 (311)
T PLN02645        230 KPSTFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKTLLV-LSGVTSESMLLSPENKIQPDFYT---SKISDFLT  305 (311)
T ss_pred             CChHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCEEEE-cCCCCCHHHHHhccCCCCCCEEE---CCHHHHHH
Confidence            4567899999999999999999999997 9999999988877666 4455443333221  12345556   88999887


Q ss_pred             HHH
Q 044617          229 ILL  231 (265)
Q Consensus       229 ~l~  231 (265)
                      +++
T Consensus       306 ~~~  308 (311)
T PLN02645        306 LKA  308 (311)
T ss_pred             Hhh
Confidence            654

>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457

Probab=99.42  E-value=1.5e-12  Score=108.24  Aligned_cols=51  Identities=8%  Similarity=0.186  Sum_probs=42.5

Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCch
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPL  202 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~  202 (265)
                      +..++.+++.+++++++++++++||||+. +|+.+|+++|+..+++. +|...
T Consensus       177 gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~v~v~-~G~~~  228 (249)
T TIGR01457       177 GKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDAGIDTLLVH-TGVTK  228 (249)
T ss_pred             CCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHcCCcEEEEc-CCCCC
Confidence            44567999999999999999999999996 89999999888766664 44433

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.

>PRK10444 UMP phosphatase; Provisional

Probab=99.41  E-value=1.5e-12  Score=107.92  Aligned_cols=72  Identities=11%  Similarity=0.106  Sum_probs=53.4

Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                      +..++.+++.+++++++++++++||||+. +|+.+|+++|...+.+ .+|......+......++..+   +++.||
T Consensus       173 gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~G~~~vlV-~~G~~~~~~l~~~~~~pd~~~---~sl~el  245 (248)
T PRK10444        173 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILV-LSGVSTLDDIDSMPFRPSWIY---PSVADI  245 (248)
T ss_pred             CCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHcCCCEEEE-CCCCCCHHHHhcCCCCCCEEE---CCHHHh
Confidence            45577999999999999999999999996 8999999988876666 455444443432222345556   777776

>PRK10187 trehalose-6-phosphate phosphatase; Provisional

Probab=99.39  E-value=2.1e-11  Score=102.35  Aligned_cols=98  Identities=12%  Similarity=0.060  Sum_probs=65.9

Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC-CCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR-DCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      ++.+.+.+|+.+++++++.+|+..+++++|||+.||+.|.+.+. ..++.++-+.         ....+...+   +++.
T Consensus       167 Ei~p~g~~Kg~al~~ll~~~~~~~~~v~~~GD~~nD~~mf~~~~~~~g~~vavg~---------a~~~A~~~l---~~~~  234 (266)
T PRK10187        167 EIKPRGTNKGEAIAAFMQEAPFAGRTPVFVGDDLTDEAGFAVVNRLGGISVKVGT---------GATQASWRL---AGVP  234 (266)
T ss_pred             EeeCCCCCHHHHHHHHHHhcCCCCCeEEEEcCCccHHHHHHHHHhcCCeEEEECC---------CCCcCeEeC---CCHH
Confidence            45588999999999999999999999999999999999875431 1133333221         111222333   8999


Q ss_pred             HHHHHHHHHHHhhccccccccccccCCCcccccc
Q 044617          225 ELKKILLHLIGAISIKEDVDSTVSSQPNSSECRS  258 (265)
Q Consensus       225 el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (265)
                      ++..+|..+.....-...|   -.-+---++||+
T Consensus       235 ~v~~~L~~l~~~~~~~~~~---~~~~~~~~~~~~  265 (266)
T PRK10187        235 DVWSWLEMITTAQQQKREN---NRRDDYESFSRS  265 (266)
T ss_pred             HHHHHHHHHHHhhhccccC---CCCCCccccccc
Confidence            9999999988655521011   123444567775

>PRK08238 hypothetical protein; Validated

Probab=99.37  E-value=5.2e-12  Score=113.59  Aligned_cols=96  Identities=20%  Similarity=0.357  Sum_probs=71.7

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ..+++||+.+++++++++|++++|+|++....++.+++++|+   |+.+++.+...              ..||      
T Consensus        70 ~lp~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGl---Fd~Vigsd~~~--------------~~kg------  126 (479)
T PRK08238         70 TLPYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGL---FDGVFASDGTT--------------NLKG------  126 (479)
T ss_pred             hCCCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---CCEEEeCCCcc--------------ccCC------
Confidence            346789999999999999999999999999999999999998   78888863111              0111      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                         ..|+..+.   +.++  .++++|+||+.+|+.+++.++ ..+++.
T Consensus       127 ---~~K~~~l~---~~l~--~~~~~yvGDS~~Dlp~~~~A~-~av~Vn  165 (479)
T PRK08238        127 ---AAKAAALV---EAFG--ERGFDYAGNSAADLPVWAAAR-RAIVVG  165 (479)
T ss_pred             ---chHHHHHH---HHhC--ccCeeEecCCHHHHHHHHhCC-CeEEEC
Confidence               22665554   3333  356899999999999997655 334444

>PTZ00174 phosphomannomutase; Provisional

Probab=99.36  E-value=1.5e-11  Score=102.15  Aligned_cols=50  Identities=18%  Similarity=0.314  Sum_probs=42.7

Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcC----CCCCcccccCCCCCCeeeec
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGD----GRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD----~~~Di~~a~~~~~~~~~~~~  197 (265)
                      ++++.+.|++|+.+++.+++.    ++++++|||    +.||++|.+.++.+++.+++
T Consensus       179 ~leI~~~gvsKg~al~~L~~~----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n  232 (247)
T PTZ00174        179 SFDVFPKGWDKTYCLRHLEND----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKN  232 (247)
T ss_pred             EEEeeeCCCcHHHHHHHHHhh----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeCC
Confidence            447788999999999999998    589999999    89999999766666677763

>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase

Probab=99.35  E-value=4.7e-12  Score=105.42  Aligned_cols=53  Identities=13%  Similarity=0.114  Sum_probs=45.3

Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      ++++.+.+|+.+++.+++.+|++++++++|||+.||+.|++.++..++++.+.
T Consensus       160 di~~~~~~K~~al~~l~~~~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na  212 (249)
T TIGR01485       160 DILPQGSGKGQALQYLLQKLAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNA  212 (249)
T ss_pred             EEEeCCCChHHHHHHHHHHcCCCccCEEEEECChhHHHHHHccCCcEEEECCC
Confidence            56788999999999999999999999999999999999996544455666543

Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.

>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family

Probab=99.33  E-value=2.9e-11  Score=101.08  Aligned_cols=50  Identities=14%  Similarity=0.094  Sum_probs=43.0

Q ss_pred             cccCCCCchHHHHHHHHHhcCCC--CceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCG--KQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~--~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      ++.+.+.+|+.+++++++.+|++  .+++++|||+.||+.|.+   .+++.++-.
T Consensus       169 ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~---~ag~~vam~  220 (256)
T TIGR01486       169 HVLGAGSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLE---VVDLAVVVP  220 (256)
T ss_pred             EEecCCCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHH---HCCEEEEeC
Confidence            45688999999999999999999  999999999999999994   455555543

This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta

>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB

Probab=99.32  E-value=1e-11  Score=100.24  Aligned_cols=43  Identities=16%  Similarity=0.203  Sum_probs=39.7

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                      +++.|.+.+|+.+++.++++++++++++++|||+.||+.+++.
T Consensus       155 ~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~  197 (204)
T TIGR01484       155 LEVLPAGVDKGSALQALLKELNGKRDEILAFGDSGNDEEMFEV  197 (204)
T ss_pred             EEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHH
Confidence            4667999999999999999999999999999999999999954

The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.

>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]

Probab=99.31  E-value=9e-13  Score=98.01  Aligned_cols=84  Identities=15%  Similarity=0.183  Sum_probs=69.4

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      .....|.  -|+.|.+.|++++|+|+.....++...+.+|+...+..+                  .             
T Consensus        36 Fnv~DG~--Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~qG~------------------~-------------   82 (170)
T COG1778          36 FNVRDGH--GIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLYQGI------------------S-------------   82 (170)
T ss_pred             eeccCcH--HHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceeeech------------------H-------------
Confidence            3445554  567778889999999999999999999999987543321                  1             


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                         .|-.+++.+++++++.++++.|+||-.+|+.++++.|
T Consensus        83 ---dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vG  119 (170)
T COG1778          83 ---DKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVG  119 (170)
T ss_pred             ---hHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcC
Confidence               2899999999999999999999999999999996533

>TIGR01684 viral_ppase viral phosphatase

Probab=99.30  E-value=2.8e-11  Score=100.39  Aligned_cols=131  Identities=21%  Similarity=0.164  Sum_probs=90.3

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCC-hhHHHHHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLD-SHVAAAIK   81 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~e~l~   81 (265)
                      +++|+||+||||++.+.                                                 .+.+. ||+.++|+
T Consensus       126 ~kvIvFDLDgTLi~~~~-------------------------------------------------~v~irdPgV~EaL~  156 (301)
T TIGR01684       126 PHVVVFDLDSTLITDEE-------------------------------------------------PVRIRDPRIYDSLT  156 (301)
T ss_pred             ceEEEEecCCCCcCCCC-------------------------------------------------ccccCCHHHHHHHH
Confidence            58999999999999832                                                 34455 99999999


Q ss_pred             HHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceE-Ee--eccccccCCCcccc-cCCCCch-HH
Q 044617           82 SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLR-IL--PYHDSTLSHHGCNL-CPSNLCK-GF  156 (265)
Q Consensus        82 ~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~-~~--~~~~~~~kp~~~~~-~~~~~~K-~~  156 (265)
                      +|+++|++++|+|++....+...++.+|+..+|+.+++++.........+ ..  ....-..+|+-.+. ...+..| |.
T Consensus       157 ~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e~~d~~~~~~~~~~~f~~d~~~~~~lPKSpr  236 (301)
T TIGR01684       157 ELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKAEEYSTMSTEDRQYRYVFTKTPFYLNTTDGKRLPKSPR  236 (301)
T ss_pred             HHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccccCCCCccccccccceEEecCCeEEeCCCCCcCCCCCe
Confidence            99999999999999999999999999999999999988754332110100 00  00000112222221 1113334 68


Q ss_pred             HHHHHHHhcCCCCce-EEEEcCCC-CCc
Q 044617          157 VLDHVCTSFGCGKQR-FIYLGDGR-GDF  182 (265)
Q Consensus       157 ~i~~~~~~~gi~~~~-~v~vGD~~-~Di  182 (265)
                      ++...+++.|+..-. +..|.|=. ||+
T Consensus       237 vvl~yL~~~gvn~~KtitLVDDl~~Nn~  264 (301)
T TIGR01684       237 VVLWYLYDLGVNYFKSITLVDDLADNNF  264 (301)
T ss_pred             ehHHHHHHcCCceeeeEEEeccCcccCc
Confidence            999999999988644 45777753 555

These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=99.29  E-value=2.2e-11  Score=100.91  Aligned_cols=85  Identities=11%  Similarity=0.033  Sum_probs=69.7

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHH--HHHHhcCccc-ccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIE--TIMEHHGLLG-CFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~--~~l~~~gl~~-~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      .++||+.++|++|+++|++++++||+......  ..++++|+.. +|+.|+++.             ..           
T Consensus        24 ~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s~-------------~~-----------   79 (242)
T TIGR01459        24 HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISSG-------------EI-----------   79 (242)
T ss_pred             ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEccH-------------HH-----------
Confidence            46899999999999999999999998877655  7789999987 888888851             00           


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT  185 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a  185 (265)
                            ....+.+++++++++++++++|||+..|+...
T Consensus        80 ------~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~  111 (242)
T TIGR01459        80 ------AVQMILESKKRFDIRNGIIYLLGHLENDIINL  111 (242)
T ss_pred             ------HHHHHHhhhhhccCCCceEEEeCCcccchhhh
Confidence                  23456667778888889999999999998766

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=99.28  E-value=8.1e-13  Score=111.78  Aligned_cols=110  Identities=13%  Similarity=0.142  Sum_probs=74.4

Q ss_pred             ChhHHHHHHHHHHcCCcEEEEeCCCHHHHH-HHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCC
Q 044617           73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIE-TIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSN  151 (265)
Q Consensus        73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~-~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~  151 (265)
                      ++++.++++.|+++|. ++|+||....+.. ..+...++..+|+.+...    .  +.     ......||         
T Consensus       145 y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~----~--g~-----~~~~~gKP---------  203 (279)
T TIGR01452       145 YAKLREACAHLREPGC-LFVATNRDPWHPLSDGSRTPGTGSLVAAIETA----S--GR-----QPLVVGKP---------  203 (279)
T ss_pred             HHHHHHHHHHHhcCCC-EEEEeCCCCCCCCcCCCcccChHHHHHHHHHH----h--CC-----ceeccCCC---------
Confidence            7789999999998886 7889998764321 112233444444433321    0  00     11113456         


Q ss_pred             CchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhh
Q 044617          152 LCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRI  206 (265)
Q Consensus       152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~  206 (265)
                        ++..+..+++++|+++++++||||+ .+|+.+|+++|...+.+ .+|+...+.+
T Consensus       204 --~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si~V-~~G~~~~~~l  256 (279)
T TIGR01452       204 --SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLV-LSGVSRLEEA  256 (279)
T ss_pred             --CHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEEEE-CCCCCCHHHH
Confidence              7899999999999999999999999 59999999988765555 5665544433

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>PHA03398 viral phosphatase superfamily protein; Provisional

Probab=99.26  E-value=6.1e-11  Score=98.52  Aligned_cols=131  Identities=21%  Similarity=0.240  Sum_probs=91.1

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCC-hhHHHHHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLD-SHVAAAIK   81 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~e~l~   81 (265)
                      +++|+||+||||++++.                                                 .+.+. |++.++|+
T Consensus       128 ~~~i~~D~D~TL~~~~~-------------------------------------------------~v~irdp~V~EtL~  158 (303)
T PHA03398        128 PHVIVFDLDSTLITDEE-------------------------------------------------PVRIRDPFVYDSLD  158 (303)
T ss_pred             ccEEEEecCCCccCCCC-------------------------------------------------ccccCChhHHHHHH
Confidence            58999999999999843                                                 34454 99999999


Q ss_pred             HHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCC-ceEEee-c-cccccCCCcccccCC-CCch-HH
Q 044617           82 SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQG-RLRILP-Y-HDSTLSHHGCNLCPS-NLCK-GF  156 (265)
Q Consensus        82 ~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~-~~~~~~-~-~~~~~kp~~~~~~~~-~~~K-~~  156 (265)
                      +|+++|++++|+||+....+...++.+|+..+|+.+++++....... +.+... + ..-..+|+-.+.-+. +..| |.
T Consensus       159 eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~i~~k~~~~~~~d~~~~~~~~~~~f~~d~~~~~~lPKSpr  238 (303)
T PHA03398        159 ELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGRKAGEYSRRVIVDNKYKMVFVKKPFYLDVTDVKNLPKSPR  238 (303)
T ss_pred             HHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCCcccccccceeecccceeEEecCceeEeCCcccCCCCCCe
Confidence            99999999999999999999999999999999998888765433221 111000 0 000112322221111 3334 68


Q ss_pred             HHHHHHHhcCCCC-ceEEEEcCCC-CCc
Q 044617          157 VLDHVCTSFGCGK-QRFIYLGDGR-GDF  182 (265)
Q Consensus       157 ~i~~~~~~~gi~~-~~~v~vGD~~-~Di  182 (265)
                      ++...+++.|+.. .-+..|.|=. ||+
T Consensus       239 vVl~yL~~~gvn~~KtiTLVDDl~~Nn~  266 (303)
T PHA03398        239 VVLWYLRKKGVNYFKTITLVDDLKSNNY  266 (303)
T ss_pred             ehHHHHHHcCcceeccEEEeccCcccCc
Confidence            9999999999886 4455777763 555

>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]

Probab=99.25  E-value=3e-11  Score=100.15  Aligned_cols=78  Identities=13%  Similarity=0.042  Sum_probs=54.7

Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI  229 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  229 (265)
                      |...+.+++.+++.++..+++++||||+. +|+.+|+++|+.++.+..+-+...+ +...+..++..+   ++..++...
T Consensus       189 GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI~~a~~~G~~t~LV~TGv~~~~~-~~~~~~~p~~v~---~sl~~~~~~  264 (269)
T COG0647         189 GKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDILGAKAAGLDTLLVLTGVSSAED-LDRAEVKPTYVV---DSLAELITA  264 (269)
T ss_pred             CCCCHHHHHHHHHHhCCCcccEEEEcCCchhhHHHHHHcCCCEEEEccCCCChhh-hhhhccCCcchH---hhHHHHHhh
Confidence            33356899999999999999999999995 9999999989887777665443433 332222233333   666666655


Q ss_pred             HHH
Q 044617          230 LLH  232 (265)
Q Consensus       230 l~~  232 (265)
                      +..
T Consensus       265 ~~~  267 (269)
T COG0647         265 LKE  267 (269)
T ss_pred             hhc
Confidence            543

>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial

Probab=99.20  E-value=1.8e-10  Score=95.13  Aligned_cols=42  Identities=19%  Similarity=0.256  Sum_probs=39.0

Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                      ++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.
T Consensus       152 ei~~~~~~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~  193 (236)
T TIGR02471       152 DVLPLRASKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRG  193 (236)
T ss_pred             EEeeCCCChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcC
Confidence            567889999999999999999999999999999999999954

Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.

>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain

Probab=99.20  E-value=1.1e-10  Score=90.71  Aligned_cols=90  Identities=12%  Similarity=0.104  Sum_probs=69.7

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-ccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      .....||+.++|++|++. ++++|.|++...+++.+++.++... +|..+++.+....              .       
T Consensus        40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~~~l~r~~~~~--------------~-------   97 (162)
T TIGR02251        40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVISRRLYRESCVF--------------T-------   97 (162)
T ss_pred             EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEeEEEEccccEE--------------e-------
Confidence            356789999999999987 9999999999999999999999765 7777766421110              0       


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                            ++. +.+.++.+|.+++++++|||++.|+.++.+
T Consensus        98 ------~~~-~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~  130 (162)
T TIGR02251        98 ------NGK-YVKDLSLVGKDLSKVIIIDNSPYSYSLQPD  130 (162)
T ss_pred             ------CCC-EEeEchhcCCChhhEEEEeCChhhhccCcc
Confidence                  111 334466678889999999999999988743

This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.

>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family

Probab=99.18  E-value=2.7e-10  Score=94.71  Aligned_cols=85  Identities=16%  Similarity=0.103  Sum_probs=64.1

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHhcCccccc-ceEEecCceecCCCceEEeeccccccCCCc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQF---YIETIMEHHGLLGCF-SEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~---~i~~~l~~~gl~~~f-~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      ...++||+.++|+.|+++|++++++||+...   .+...++.+|+..++ +.++..+             .    .+   
T Consensus       116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~lllr~-------------~----~~---  175 (266)
T TIGR01533       116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEHLLLKK-------------D----KS---  175 (266)
T ss_pred             CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcceEEeCC-------------C----CC---
Confidence            5678999999999999999999999998744   345677888986543 3344320             0    01   


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT  185 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a  185 (265)
                              .|+...+.+.+.++|    +++|||..+|+...
T Consensus       176 --------~K~~rr~~I~~~y~I----vl~vGD~~~Df~~~  204 (266)
T TIGR01533       176 --------SKESRRQKVQKDYEI----VLLFGDNLLDFDDF  204 (266)
T ss_pred             --------CcHHHHHHHHhcCCE----EEEECCCHHHhhhh
Confidence                    278888888887766    89999999999654

which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.

>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase

Probab=99.18  E-value=1.3e-10  Score=95.13  Aligned_cols=40  Identities=20%  Similarity=0.185  Sum_probs=35.9

Q ss_pred             ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc
Q 044617           73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG  112 (265)
Q Consensus        73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~  112 (265)
                      .+++.+.|++|+++|++++++|++....+...++.+|+..
T Consensus        17 ~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~   56 (225)
T TIGR02461        17 PGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP   56 (225)
T ss_pred             chHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence            4678999999999999999999999999999999999754

Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.

>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed

Probab=99.15  E-value=7.2e-10  Score=92.28  Aligned_cols=43  Identities=12%  Similarity=-0.018  Sum_probs=37.3

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGC  113 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~  113 (265)
                      ...+.+.+.|++|+++|++++++|++....+..+.+.+++..+
T Consensus        18 ~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p   60 (302)
T PRK12702         18 NSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHP   60 (302)
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCe
Confidence            3567788999999999999999999999999999999988654

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional

Probab=99.13  E-value=7e-10  Score=101.94  Aligned_cols=38  Identities=16%  Similarity=0.142  Sum_probs=35.0

Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEE--cCCCCCcccccC
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYL--GDGRGDFCPTLK  187 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~v--GD~~~Di~~a~~  187 (265)
                      .+.+|+.+++.+++.++++.+++++|  ||+.||+.|.+.
T Consensus       610 ~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~  649 (694)
T PRK14502        610 GGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLET  649 (694)
T ss_pred             CCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHh
Confidence            58999999999999999998999988  999999999944

>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea

Probab=99.13  E-value=4.8e-11  Score=92.33  Aligned_cols=102  Identities=13%  Similarity=0.126  Sum_probs=61.9

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEe-CCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVS-DANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS-~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      .+.++|++.++|+.|+++|++++++| +.....++..|+.+++............+++   ..+   ..     |     
T Consensus        43 ~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~~~~~~F~---~~e---I~-----~-----  106 (169)
T PF12689_consen   43 EVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGVPLIEYFD---YLE---IY-----P-----  106 (169)
T ss_dssp             EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C----------CCEC---EEE---ES-----S-----
T ss_pred             EEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccccchhhcc---hhh---ee-----c-----
Confidence            57899999999999999999999999 4567799999999998722111222111111   011   11     1     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                          .+|..-++.+.++.|++++++++|.|....+....++|.
T Consensus       107 ----gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~lGV  145 (169)
T PF12689_consen  107 ----GSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSKLGV  145 (169)
T ss_dssp             ----S-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHTTT-
T ss_pred             ----CchHHHHHHHHHhcCCChhHEEEecCchhcceeeEecCc
Confidence                249999999999999999999999999877766655454

The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.

>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []

Probab=99.05  E-value=1.4e-10  Score=89.51  Aligned_cols=83  Identities=20%  Similarity=0.389  Sum_probs=59.1

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCC----C----------HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDA----N----------QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHD  137 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~----~----------~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~  137 (265)
                      +.+++.+.|+.|++.||.++|+||-    .          ...+..+++.+++.  + .++.+             +...
T Consensus        30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~il~~l~ip--~-~~~~a-------------~~~d   93 (159)
T PF08645_consen   30 FPPGVPEALRELHKKGYKIVIVTNQSGIGRGMGEKDLENFHEKIENILKELGIP--I-QVYAA-------------PHKD   93 (159)
T ss_dssp             C-TTHHHHHHHHHHTTEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHHHHHCTS---E-EEEEC-------------GCSS
T ss_pred             cchhHHHHHHHHHhcCCeEEEEeCccccccccccchHHHHHHHHHHHHHHcCCc--e-EEEec-------------CCCC
Confidence            4568999999999999999999984    1          12355666777765  2 33433             2334


Q ss_pred             cccCCCcccccCCCCchHHHHHHHHHhcC----CCCceEEEEcCCCCC
Q 044617          138 STLSHHGCNLCPSNLCKGFVLDHVCTSFG----CGKQRFIYLGDGRGD  181 (265)
Q Consensus       138 ~~~kp~~~~~~~~~~~K~~~i~~~~~~~g----i~~~~~v~vGD~~~D  181 (265)
                      ..+||           ++.+++.+++.++    ++.++++||||+..+
T Consensus        94 ~~RKP-----------~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr  130 (159)
T PF08645_consen   94 PCRKP-----------NPGMWEFALKDYNDGVEIDLANSFYVGDAAGR  130 (159)
T ss_dssp             TTSTT-----------SSHHHHHHCCCTSTT--S-CCC-EEEESSCHC
T ss_pred             CCCCC-----------chhHHHHHHHhccccccccccceEEEeccCCC
Confidence            56788           7899999999987    588999999998665

; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=99.04  E-value=1.4e-10  Score=96.84  Aligned_cols=132  Identities=9%  Similarity=-0.012  Sum_probs=93.0

Q ss_pred             ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCC
Q 044617           73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNL  152 (265)
Q Consensus        73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~  152 (265)
                      ++++.+.+..|++.+++++++||....+.......+|+..+|+.+.+..      +.     ......||          
T Consensus       122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~~~~~i~~~~------~~-----~~~~~gKP----------  180 (257)
T TIGR01458       122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGPFVTALEYAT------DT-----KATVVGKP----------  180 (257)
T ss_pred             HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchHHHHHHHHHh------CC-----CceeecCC----------
Confidence            6788888999999889999999988776665556667766666554420      10     01112466          


Q ss_pred             chHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHH
Q 044617          153 CKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKIL  230 (265)
Q Consensus       153 ~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l  230 (265)
                       ++.+++.+++++++++++++||||+. +|+.+|+++|...+++..+.+...+ .......++..+   +++.||.++|
T Consensus       181 -~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~-~~~~~~~pd~~~---~sl~el~~~l  254 (257)
T TIGR01458       181 -SKTFFLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSD-EEKINVPPDLTC---DSLPHAVDLI  254 (257)
T ss_pred             -CHHHHHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHH-hcccCCCCCEEE---CCHHHHHHHH
Confidence             89999999999999999999999996 9999999988877776433223222 111112344555   8899988765

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>PLN02382 probable sucrose-phosphatase

Probab=99.03  E-value=2.1e-09  Score=95.51  Aligned_cols=54  Identities=15%  Similarity=0.114  Sum_probs=44.9

Q ss_pred             cccccCCCCchHHHHHHHHHhc---CCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSF---GCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~---gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      ..++.+.+.+|+.+++.+++++   |+++++++++||+.||++|.+.++..++++.+
T Consensus       166 ~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~N  222 (413)
T PLN02382        166 DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSN  222 (413)
T ss_pred             EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcC
Confidence            3477899999999999999999   99999999999999999999553434455544

>PLN02423 phosphomannomutase

Probab=99.03  E-value=8.4e-09  Score=85.56  Aligned_cols=39  Identities=18%  Similarity=0.267  Sum_probs=34.9

Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcC----CCCCccccc
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGD----GRGDFCPTL  186 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD----~~~Di~~a~  186 (265)
                      .++++.+.|.+|+.+++.++     +++++++|||    +.||++|.+
T Consensus       179 ~~iDi~~~gvnKg~al~~L~-----~~~e~~aFGD~~~~~~ND~eMl~  221 (245)
T PLN02423        179 ISFDVFPQGWDKTYCLQFLE-----DFDEIHFFGDKTYEGGNDHEIFE  221 (245)
T ss_pred             EEEEEeeCCCCHHHHHHHhc-----CcCeEEEEeccCCCCCCcHHHHh
Confidence            35578899999999999999     7899999999    799999984

>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases

Probab=99.00  E-value=2.4e-09  Score=82.61  Aligned_cols=94  Identities=12%  Similarity=0.108  Sum_probs=65.9

Q ss_pred             CCCCChhHHHHHHHHHHcCCc--EEEEeCCC-------HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCD--LKIVSDAN-------QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~--~~ivS~~~-------~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                      ...+.|...+.++++++.+..  ++|+||+.       ...++.+.+.+|+.     ++..                 ..
T Consensus        57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp-----vl~h-----------------~~  114 (168)
T PF09419_consen   57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP-----VLRH-----------------RA  114 (168)
T ss_pred             cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc-----EEEe-----------------CC
Confidence            346788999999999998764  99999983       56677777888863     2221                 01


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcC-----CCCceEEEEcCCC-CCcccccCCCCCCeeeec
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFG-----CGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~g-----i~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~  197 (265)
                      +             ||..+..+++.++     ..|+++++|||.. +|+.+|.++|..++++-.
T Consensus       115 k-------------KP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~~tilv~~  165 (168)
T PF09419_consen  115 K-------------KPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGSYTILVTD  165 (168)
T ss_pred             C-------------CCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCceEEEEec
Confidence            2             3333333333333     3589999999995 999999888877666643

All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.

>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

Probab=98.99  E-value=1.4e-08  Score=96.76  Aligned_cols=76  Identities=14%  Similarity=0.189  Sum_probs=55.7

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      +++.|.+.+|+.+++.+++  +++++.++++||+.||..|.+.+...++.++-++         .+..++..+   ++.+
T Consensus       649 veV~p~~vnKG~al~~ll~--~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~---------~~s~A~~~l---~~~~  714 (726)
T PRK14501        649 VEVRPAGVNKGRAVRRLLE--AGPYDFVLAIGDDTTDEDMFRALPETAITVKVGP---------GESRARYRL---PSQR  714 (726)
T ss_pred             EEEEECCCCHHHHHHHHHh--cCCCCEEEEECCCCChHHHHHhcccCceEEEECC---------CCCcceEeC---CCHH
Confidence            3556889999999999999  6788899999999999999976543444544332         122233334   7888


Q ss_pred             HHHHHHHHHH
Q 044617          225 ELKKILLHLI  234 (265)
Q Consensus       225 el~~~l~~~~  234 (265)
                      |+.+.|+.+.
T Consensus       715 eV~~~L~~l~  724 (726)
T PRK14501        715 EVRELLRRLL  724 (726)
T ss_pred             HHHHHHHHHh
Confidence            9988888764

>TIGR00685 T6PP trehalose-phosphatase

Probab=98.97  E-value=9.5e-09  Score=85.27  Aligned_cols=76  Identities=16%  Similarity=0.088  Sum_probs=54.9

Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCC-------CCCCeeeecCCCchhhhhhcCCCeeeEEEE
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKL-------RDCDFVMPRKNYPLWDRICSNPMLIKAKVH  218 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (265)
                      +..|.+.+|+.+++.+++++++.+.+++||||+.||+.+++.+       +..++.+. .+  .   .   ...++..+ 
T Consensus       160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~---~---~~~A~~~~-  229 (244)
T TIGR00685       160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--S---K---KTVAKFHL-  229 (244)
T ss_pred             EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--C---c---CCCceEeC-
Confidence            3447788999999999999999999999999999999999765       22223332 11  0   1   11223334 


Q ss_pred             eCCCHHHHHHHHHHH
Q 044617          219 EWSSAEELKKILLHL  233 (265)
Q Consensus       219 ~~~~~~el~~~l~~~  233 (265)
                        +++.++.++|+.+
T Consensus       230 --~~~~~v~~~L~~l  242 (244)
T TIGR00685       230 --TGPQQVLEFLGLL  242 (244)
T ss_pred             --CCHHHHHHHHHHH
Confidence              8999999988765

At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.

>PTZ00445 p36-lilke protein; Provisional

Probab=98.96  E-value=1.1e-09  Score=86.48  Aligned_cols=112  Identities=11%  Similarity=0.158  Sum_probs=75.4

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHH---------------HHHHHHHhcCcccccceEEec-CceecCCCceEEee
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQF---------------YIETIMEHHGLLGCFSEIYTN-PTYVDEQGRLRILP  134 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~---------------~i~~~l~~~gl~~~f~~i~~~-~~~~d~~~~~~~~~  134 (265)
                      .+.|+++.++..|++.|++++|||=+...               .++..++.-+.+..+..+++- ..++++...+    
T Consensus        75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~~~~~~~~~~Isg~~li~~~lk~s~~~~~i~~~~~yyp~~w~~p~~y----  150 (219)
T PTZ00445         75 SVTPDFKILGKRLKNSNIKISVVTFSDKELIPSENRPRYISGDRMVEAALKKSKCDFKIKKVYAYYPKFWQEPSDY----  150 (219)
T ss_pred             cCCHHHHHHHHHHHHCCCeEEEEEccchhhccccCCcceechHHHHHHHHHhcCccceeeeeeeeCCcccCChhhh----
Confidence            56899999999999999999999865443               466666655544334445431 1111100000    


Q ss_pred             ccccccCCCcccccCCCCchHHH--H--HHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          135 YHDSTLSHHGCNLCPSNLCKGFV--L--DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       135 ~~~~~~kp~~~~~~~~~~~K~~~--i--~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      ......||           .+..  +  +++++++|+.|+++++|.|....+++|.++|..++.+..
T Consensus       151 ~~~gl~KP-----------dp~iK~yHle~ll~~~gl~peE~LFIDD~~~NVeaA~~lGi~ai~f~~  206 (219)
T PTZ00445        151 RPLGLDAP-----------MPLDKSYHLKQVCSDFNVNPDEILFIDDDMNNCKNALKEGYIALHVTG  206 (219)
T ss_pred             hhhcccCC-----------CccchHHHHHHHHHHcCCCHHHeEeecCCHHHHHHHHHCCCEEEEcCC
Confidence            00112233           2334  5  999999999999999999999999999998887766653

>COG4996 Predicted phosphatase [General function prediction only]

Probab=98.96  E-value=2.4e-09  Score=77.28  Aligned_cols=83  Identities=22%  Similarity=0.179  Sum_probs=69.7

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++|.++++++++++.|+-+..+|=+....+-..++.+++.+||+.++..             |++.           
T Consensus        39 ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLral~~~~yFhy~Vie-------------PhP~-----------   94 (164)
T COG4996          39 EVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALRALDLLQYFHYIVIE-------------PHPY-----------   94 (164)
T ss_pred             EEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHHHhchhhhEEEEEec-------------CCCh-----------
Confidence            4688999999999999999999999988888888889999999999877763             4442           


Q ss_pred             CCCCchHHHHHHHHHhcC------CCCceEEEEcCCCC
Q 044617          149 PSNLCKGFVLDHVCTSFG------CGKQRFIYLGDGRG  180 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~g------i~~~~~v~vGD~~~  180 (265)
                           |..++.+++...+      +.|++++|+.|..-
T Consensus        95 -----K~~ML~~llr~i~~er~~~ikP~~Ivy~DDR~i  127 (164)
T COG4996          95 -----KFLMLSQLLREINTERNQKIKPSEIVYLDDRRI  127 (164)
T ss_pred             -----hHHHHHHHHHHHHHhhccccCcceEEEEecccc
Confidence                 7777777776654      78999999999853

>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase

Probab=98.90  E-value=1.5e-08  Score=87.00  Aligned_cols=126  Identities=14%  Similarity=0.165  Sum_probs=85.9

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc-C-------cccccceEEecC---ceecCCCceE--Eeecc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH-G-------LLGCFSEIYTNP---TYVDEQGRLR--ILPYH  136 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~-g-------l~~~f~~i~~~~---~~~d~~~~~~--~~~~~  136 (265)
                      +...||+.++|+.|+++|++++|+||+...+++.+++.+ |       +.++|+.|++..   ..+. .++.-  +.+. 
T Consensus       183 v~~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yFD~IIt~a~KP~FF~-~~~pf~~v~~~-  260 (343)
T TIGR02244       183 VLRDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYFDVVIVDARKPGFFT-EGRPFRQVDVE-  260 (343)
T ss_pred             hccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhCcEEEeCCCCCcccC-CCCceEEEeCC-
Confidence            456899999999999999999999999999999999996 7       889999988752   1222 11110  0000 


Q ss_pred             ccccCCCcccccCC-CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCccccc-CCCCCCeeeec
Q 044617          137 DSTLSHHGCNLCPS-NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTL-KLRDCDFVMPR  197 (265)
Q Consensus       137 ~~~~kp~~~~~~~~-~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~-~~~~~~~~~~~  197 (265)
                      ....++........ ++=...-+..+.+.+|+.+++++||||.. .|+..++ .+|+.++.+..
T Consensus       261 ~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~p  324 (343)
T TIGR02244       261 TGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIP  324 (343)
T ss_pred             CCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEch
Confidence            00011111000000 11122446777888889999999999995 9999887 67877777764

A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.

>PLN02177 glycerol-3-phosphate acyltransferase

Probab=98.80  E-value=1.7e-07  Score=84.85  Aligned_cols=96  Identities=17%  Similarity=0.154  Sum_probs=64.3

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-cCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      .+.+.+.+.+   +++|. .+|+|.....+++++++. +|+    +.+++++..++.+|.+++.-..     + +   |.
T Consensus       110 ~l~~~a~~~~---~~~g~-~vvVSASp~~~Vepfa~~~LGi----d~VIgTeLev~~~G~~TG~i~g-----~-~---~c  172 (497)
T PLN02177        110 DVHPETWRVF---NSFGK-RYIITASPRIMVEPFVKTFLGA----DKVLGTELEVSKSGRATGFMKK-----P-G---VL  172 (497)
T ss_pred             hcCHHHHHHH---HhCCC-EEEEECCcHHHHHHHHHHcCCC----CEEEecccEECcCCEEeeeecC-----C-C---CC
Confidence            3667766554   55664 499999999999999976 785    4788988777556777653221     0 0   01


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                      .|..|...++   +.+|.+... +++||+.+|..+...
T Consensus       173 ~Ge~Kv~rl~---~~~g~~~~~-~aYgDS~sD~plL~~  206 (497)
T PLN02177        173 VGDHKRDAVL---KEFGDALPD-LGLGDRETDHDFMSI  206 (497)
T ss_pred             ccHHHHHHHH---HHhCCCCce-EEEECCccHHHHHHh
Confidence            2333555555   555544434 899999999998843

>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]

Probab=98.80  E-value=1.1e-07  Score=91.31  Aligned_cols=79  Identities=16%  Similarity=0.210  Sum_probs=55.5

Q ss_pred             ccccCCCCchHHHHHHHHHh---cCCCCceEEEEcCCCCCcccccCCCCC--C--e------eeecCCCchhhhhhcCCC
Q 044617          145 CNLCPSNLCKGFVLDHVCTS---FGCGKQRFIYLGDGRGDFCPTLKLRDC--D--F------VMPRKNYPLWDRICSNPM  211 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~---~gi~~~~~v~vGD~~~Di~~a~~~~~~--~--~------~~~~~~~~~~~~~~~~~~  211 (265)
                      +++.+.+.+|+.+++.+++.   .|++++.+++|||..||..|.+.++..  +  +      .-+..|        ..++
T Consensus       754 vEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG--------~~~S  825 (854)
T PLN02205        754 VEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG--------QKPS  825 (854)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC--------CCCc
Confidence            35568899999999999854   588999999999999999998665421  1  1      001111        1233


Q ss_pred             eeeEEEEeCCCHHHHHHHHHHHH
Q 044617          212 LIKAKVHEWSSAEELKKILLHLI  234 (265)
Q Consensus       212 ~~~~~~~~~~~~~el~~~l~~~~  234 (265)
                      .+...+   ++..|+.++|+.+.
T Consensus       826 ~A~y~L---~d~~eV~~lL~~L~  845 (854)
T PLN02205        826 KAKYYL---DDTAEIVRLMQGLA  845 (854)
T ss_pred             cCeEec---CCHHHHHHHHHHHH
Confidence            333334   99999999998876

>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase

Probab=98.80  E-value=2.9e-08  Score=91.41  Aligned_cols=119  Identities=13%  Similarity=0.083  Sum_probs=83.5

Q ss_pred             CCCCChhHHHHHHHHHHcCC-cEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGC-DLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~-~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.+.|++|+++|+ +++++||.....++.+++++|+.++|..+..               .            
T Consensus       360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~~f~~~~p---------------~------------  412 (536)
T TIGR01512       360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDEVHAELLP---------------E------------  412 (536)
T ss_pred             eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChhhhhccCc---------------H------------
Confidence            34689999999999999999 9999999999999999999999766542211               1            


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                           .|...++++.++    .++++||||+.||+.++++   +++.++.+ +...+....   .++..+ .-+++.+|.
T Consensus       413 -----~K~~~i~~l~~~----~~~v~~vGDg~nD~~al~~---A~vgia~g-~~~~~~~~~---~ad~vl-~~~~l~~l~  475 (536)
T TIGR01512       413 -----DKLEIVKELREK----YGPVAMVGDGINDAPALAA---ADVGIAMG-ASGSDVAIE---TADVVL-LNDDLSRLP  475 (536)
T ss_pred             -----HHHHHHHHHHhc----CCEEEEEeCCHHHHHHHHh---CCEEEEeC-CCccHHHHH---hCCEEE-ECCCHHHHH
Confidence                 277777776554    3799999999999999955   44555533 211222221   122332 226788877


Q ss_pred             HHHH
Q 044617          228 KILL  231 (265)
Q Consensus       228 ~~l~  231 (265)
                      +.+.
T Consensus       476 ~~i~  479 (536)
T TIGR01512       476 QAIR  479 (536)
T ss_pred             HHHH
Confidence            6543

.

>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase

Probab=98.80  E-value=3e-08  Score=91.83  Aligned_cols=118  Identities=15%  Similarity=0.110  Sum_probs=83.4

Q ss_pred             CCCCChhHHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLG-CDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g-~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++|++|+++| ++++++||.....+..+++++|+.++|..+.               |.            
T Consensus       382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~~f~~~~---------------p~------------  434 (556)
T TIGR01525       382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDEVHAELL---------------PE------------  434 (556)
T ss_pred             cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCeeeccCC---------------HH------------
Confidence            3478999999999999999 9999999999999999999999876554321               11            


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                           .|+..++++.+    .+++++||||+.||+.+++++   ++.++.+ .+ .+....   .++..+. -+++..|.
T Consensus       435 -----~K~~~v~~l~~----~~~~v~~vGDg~nD~~al~~A---~vgia~g-~~-~~~~~~---~Ad~vi~-~~~~~~l~  496 (556)
T TIGR01525       435 -----DKLAIVKELQE----EGGVVAMVGDGINDAPALAAA---DVGIAMG-AG-SDVAIE---AADIVLL-NDDLSSLP  496 (556)
T ss_pred             -----HHHHHHHHHHH----cCCEEEEEECChhHHHHHhhC---CEeEEeC-CC-CHHHHH---hCCEEEe-CCCHHHHH
Confidence                 27777777664    456999999999999999654   4555433 22 222221   2334332 25777777


Q ss_pred             HHHH
Q 044617          228 KILL  231 (265)
Q Consensus       228 ~~l~  231 (265)
                      +.++
T Consensus       497 ~~i~  500 (556)
T TIGR01525       497 TAID  500 (556)
T ss_pred             HHHH
Confidence            6543

This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.

>smart00775 LNS2 LNS2 domain

Probab=98.79  E-value=3.9e-08  Score=75.81  Aligned_cols=104  Identities=11%  Similarity=0.038  Sum_probs=62.1

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHH---HHHHh-----cCcccccceEEec-CceecC-CCceEEeecccccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIE---TIMEH-----HGLLGCFSEIYTN-PTYVDE-QGRLRILPYHDSTL  140 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~---~~l~~-----~gl~~~f~~i~~~-~~~~d~-~~~~~~~~~~~~~~  140 (265)
                      .+.|++.+++++++++|++++++|+++...+.   ..++.     .++..  ..++++ ...+.+ .+.       ....
T Consensus        27 ~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~~~~~e-------~i~~   97 (157)
T smart00775       27 WTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFAALHRE-------VISK   97 (157)
T ss_pred             cCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchhhhhcc-------cccC
Confidence            56899999999999999999999999877764   56655     22321  134433 111100 000       0001


Q ss_pred             CCCcccccCCCCchHHHHHHHHHhcCCCCceE-EEEcCCCCCcccccCCCCC
Q 044617          141 SHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRF-IYLGDGRGDFCPTLKLRDC  191 (265)
Q Consensus       141 kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~-v~vGD~~~Di~~a~~~~~~  191 (265)
                      .|        ..-|...++.+.+.+.-.--.. ..+||+.+|+.+-.++|..
T Consensus        98 ~~--------~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~  141 (157)
T smart00775       98 KP--------EVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP  141 (157)
T ss_pred             CH--------HHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence            11        0126777887776553111234 4589999999887665553

This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.

>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []

Probab=98.78  E-value=7.7e-09  Score=85.87  Aligned_cols=52  Identities=19%  Similarity=0.277  Sum_probs=40.3

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      +++.|.+.+|..+++++++++++++++++++|||.||+.|... +..++++++
T Consensus       157 ldilP~~a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~-~~~~vvV~N  208 (247)
T PF05116_consen  157 LDILPKGASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEG-GDHGVVVGN  208 (247)
T ss_dssp             EEEEETT-SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCC-SSEEEE-TT
T ss_pred             EEEccCCCCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcC-cCCEEEEcC
Confidence            4677999999999999999999999999999999999999833 434455544

SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....

>PLN02580 trehalose-phosphatase

Probab=98.77  E-value=2.3e-07  Score=80.87  Aligned_cols=82  Identities=20%  Similarity=0.193  Sum_probs=56.0

Q ss_pred             cccC-CCCchHHHHHHHHHhcCCCCce---EEEEcCCCCCcccccCCCC--CCeeeecCCCchhhhhhcCCCeeeEEEEe
Q 044617          146 NLCP-SNLCKGFVLDHVCTSFGCGKQR---FIYLGDGRGDFCPTLKLRD--CDFVMPRKNYPLWDRICSNPMLIKAKVHE  219 (265)
Q Consensus       146 ~~~~-~~~~K~~~i~~~~~~~gi~~~~---~v~vGD~~~Di~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  219 (265)
                      ++.+ .+.+|+.+++.+++.++++..+   .+||||..||..|.+.+..  .++.++-.. ..      ....+...   
T Consensus       293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn-~~------~~t~A~y~---  362 (384)
T PLN02580        293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSS-VP------KESNAFYS---  362 (384)
T ss_pred             EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEec-CC------CCccceEE---
Confidence            4456 5999999999999999987653   3899999999998865332  233332111 00      11222333   


Q ss_pred             CCCHHHHHHHHHHHHHhh
Q 044617          220 WSSAEELKKILLHLIGAI  237 (265)
Q Consensus       220 ~~~~~el~~~l~~~~~~~  237 (265)
                      .+++.|+.++|+.+..+.
T Consensus       363 L~dp~eV~~~L~~L~~~~  380 (384)
T PLN02580        363 LRDPSEVMEFLKSLVTWK  380 (384)
T ss_pred             cCCHHHHHHHHHHHHHhh
Confidence            499999999999987764

>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A

Probab=98.76  E-value=8.6e-08  Score=68.25  Aligned_cols=49  Identities=12%  Similarity=0.052  Sum_probs=34.7

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCH---HHHHHHHHhcCcccccceEEe
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQ---FYIETIMEHHGLLGCFSEIYT  119 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~---~~i~~~l~~~gl~~~f~~i~~  119 (265)
                      .++||+.++|++|+++|.+++++||+..   ......++.+|+.-.-+.|++
T Consensus        14 ~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~t   65 (101)
T PF13344_consen   14 EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIIT   65 (101)
T ss_dssp             EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEE
T ss_pred             CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEC
Confidence            4689999999999999999999999853   334445578887644444554

...

>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B

Probab=98.74  E-value=5.8e-09  Score=70.14  Aligned_cols=69  Identities=14%  Similarity=0.111  Sum_probs=52.5

Q ss_pred             hHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          154 KGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       154 K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                      ++.++..++++++++++++++|||+ ..|+.+|+++|..++.+..+.+.... +......++..+   +++.|+
T Consensus         6 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~-~~~~~~~pd~vv---~~l~e~   75 (75)
T PF13242_consen    6 SPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPED-LEKAEHKPDYVV---DDLKEA   75 (75)
T ss_dssp             SHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCG-HHHSSSTTSEEE---SSGGGH
T ss_pred             cHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHH-HhccCCCCCEEE---CCHHhC
Confidence            8999999999999999999999999 99999999988877777665444333 321222445556   777664

...

>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA

Probab=98.73  E-value=3.6e-08  Score=81.35  Aligned_cols=46  Identities=9%  Similarity=0.015  Sum_probs=38.7

Q ss_pred             CCchHHHHHHHHHhcCCCCceE-EEEcCCC-CCcccccCCCCCCeeee
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRF-IYLGDGR-GDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~-v~vGD~~-~Di~~a~~~~~~~~~~~  196 (265)
                      +..++..++.++++++++++++ +||||+. +|+.+|+++|...+.+.
T Consensus       187 ~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~i~v~  234 (236)
T TIGR01460       187 GKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKNAGFDTLLVL  234 (236)
T ss_pred             cCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHHCCCcEEEEe
Confidence            3457799999999999988887 9999998 89999998887666553

Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.

>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459

Probab=98.64  E-value=9.8e-09  Score=85.09  Aligned_cols=97  Identities=9%  Similarity=-0.044  Sum_probs=73.0

Q ss_pred             ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceE--EecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEI--YTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i--~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      ++++.++++.+.++|+++ |+||....+....+..++...+|..+  .+.        .    +  ....||        
T Consensus       140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~~~~i~~~g~--------~----~--~~~gKP--------  196 (242)
T TIGR01459       140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYYAELIKQLGG--------K----V--IYSGKP--------  196 (242)
T ss_pred             HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHHHHHHHHhCC--------c----E--ecCCCC--------
Confidence            689999999998889997 88999887776666666665554433  221        0    1  123466        


Q ss_pred             CCchHHHHHHHHHhcCCC-CceEEEEcCC-CCCcccccCCCCCCeee
Q 044617          151 NLCKGFVLDHVCTSFGCG-KQRFIYLGDG-RGDFCPTLKLRDCDFVM  195 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~-~~~~v~vGD~-~~Di~~a~~~~~~~~~~  195 (265)
                         ++..++.++++++.. +++++||||+ .+|+.+|+++|...+.+
T Consensus       197 ---~~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v  240 (242)
T TIGR01459       197 ---YPAIFHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDTALV  240 (242)
T ss_pred             ---CHHHHHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeEEEE
Confidence               899999999999864 6799999999 69999998877765554

This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)

>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase

Probab=98.63  E-value=2.4e-07  Score=85.85  Aligned_cols=88  Identities=14%  Similarity=0.183  Sum_probs=69.8

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|++|+++|++++++|++....++.+++++|++     +++..   .        |.             
T Consensus       403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~-----~~~~~---~--------p~-------------  453 (562)
T TIGR01511       403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN-----VRAEV---L--------PD-------------  453 (562)
T ss_pred             cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----EEccC---C--------hH-------------
Confidence            3468999999999999999999999999999999999999984     33310   0        11             


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                          .|...++++.+    .+++++||||+.||+.++++   +++.++
T Consensus       454 ----~K~~~v~~l~~----~~~~v~~VGDg~nD~~al~~---A~vgia  490 (562)
T TIGR01511       454 ----DKAALIKELQE----KGRVVAMVGDGINDAPALAQ---ADVGIA  490 (562)
T ss_pred             ----HHHHHHHHHHH----cCCEEEEEeCCCccHHHHhh---CCEEEE
Confidence                27888877765    45799999999999999965   445554

One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.

>COG4229 Predicted enolase-phosphatase [Energy production and conversion]

Probab=98.59  E-value=7.8e-07  Score=68.21  Aligned_cols=104  Identities=15%  Similarity=0.172  Sum_probs=79.6

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc---CcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH---GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~---gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                      ..+++|++.+.|++-++.|++++|-|++.....+-+..+-   ++..+|+..+...             .     .+   
T Consensus       101 kahlypDav~~ik~wk~~g~~vyiYSSGSV~AQkL~Fghs~agdL~~lfsGyfDtt-------------i-----G~---  159 (229)
T COG4229         101 KAHLYPDAVQAIKRWKALGMRVYIYSSGSVKAQKLFFGHSDAGDLNSLFSGYFDTT-------------I-----GK---  159 (229)
T ss_pred             ccccCHhHHHHHHHHHHcCCcEEEEcCCCchhHHHhhcccccccHHhhhcceeecc-------------c-----cc---
Confidence            4588999999999999999999999999887766665543   3344444433310             0     00   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN  199 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~  199 (265)
                            .-...-+.++++..|++|.++++..|.++-+.+|+.+|+++....+.|
T Consensus       160 ------KrE~~SY~kIa~~iGl~p~eilFLSDn~~EL~AA~~vGl~t~l~~R~g  207 (229)
T COG4229         160 ------KRESQSYAKIAGDIGLPPAEILFLSDNPEELKAAAGVGLATGLAVRPG  207 (229)
T ss_pred             ------cccchhHHHHHHhcCCCchheEEecCCHHHHHHHHhcchheeeeecCC
Confidence                  113567899999999999999999999999999999899887777654

>COG4087 Soluble P-type ATPase [General function prediction only]

Probab=98.58  E-value=3.5e-07  Score=66.28  Aligned_cols=119  Identities=14%  Similarity=0.164  Sum_probs=81.2

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ..++++.+.+.|+.|++. +.++|+|+.....+...++..|+...  .++..             ...            
T Consensus        28 gGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~--rv~a~-------------a~~------------   79 (152)
T COG4087          28 GGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE--RVFAG-------------ADP------------   79 (152)
T ss_pred             CcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--eeecc-------------cCH------------
Confidence            468899999999999999 99999999999999999999997633  34431             000            


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC--CchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN--YPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                         ..|...++.+-+    +.+.++||||+.||+.+.+   .++++++.-+  .....++.    .++..+   .+..|+
T Consensus        80 ---e~K~~ii~eLkk----~~~k~vmVGnGaND~laLr---~ADlGI~tiq~e~v~~r~l~----~ADvvi---k~i~e~  142 (152)
T COG4087          80 ---EMKAKIIRELKK----RYEKVVMVGNGANDILALR---EADLGICTIQQEGVPERLLL----TADVVL---KEIAEI  142 (152)
T ss_pred             ---HHHHHHHHHhcC----CCcEEEEecCCcchHHHhh---hcccceEEeccCCcchHHHh----hchhhh---hhHHHH
Confidence               116666666665    4488999999999998884   4555544322  11111111    123344   777887


Q ss_pred             HHHHHH
Q 044617          227 KKILLH  232 (265)
Q Consensus       227 ~~~l~~  232 (265)
                      ++++..
T Consensus       143 ldl~~~  148 (152)
T COG4087         143 LDLLKD  148 (152)
T ss_pred             HHHhhc
Confidence            777654

>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain

Probab=98.53  E-value=3.3e-07  Score=70.53  Aligned_cols=51  Identities=18%  Similarity=0.272  Sum_probs=44.0

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-cc-ceEEec
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CF-SEIYTN  120 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f-~~i~~~  120 (265)
                      ...++||+.++|+.+++. ++++|+|++...++..+++.++... +| +.+++.
T Consensus        56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~~~F~~ri~~r  108 (156)
T TIGR02250        56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDGKYFGDRIISR  108 (156)
T ss_pred             EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCCCeeccEEEEe
Confidence            456799999999999965 9999999999999999999999874 77 556653

This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.

>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]

Probab=98.53  E-value=9.1e-07  Score=73.36  Aligned_cols=56  Identities=14%  Similarity=0.076  Sum_probs=46.4

Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhh
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRI  206 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~  206 (265)
                      |...+.+++.+.++++++|++++||||+. +||.-++++|..++.+..+.....+..
T Consensus       223 GKP~~~m~~~l~~~~~i~psRt~mvGDRL~TDIlFG~~~G~~TLLvltGv~~led~~  279 (306)
T KOG2882|consen  223 GKPSTFMFEYLLEKFNIDPSRTCMVGDRLDTDILFGKNCGFKTLLVLSGVTTLEDIL  279 (306)
T ss_pred             CCCCHHHHHHHHHHcCCCcceEEEEcccchhhhhHhhccCcceEEEecCcCcHHHHH
Confidence            33356889999999999999999999995 999999999999888887765555543

>COG4030 Uncharacterized protein conserved in archaea [Function unknown]

Probab=98.53  E-value=7.9e-06  Score=65.03  Aligned_cols=189  Identities=12%  Similarity=0.076  Sum_probs=113.2

Q ss_pred             EEEecCCCCCCCCchHHHHHHhCch-H-H------HHHH----HccCChh--HHHHHHHHHHHhCCCCHHHHHHHhcC-C
Q 044617            6 VVFDFDRTLIDDDSDNWVVTQMGLT-H-L------FNQL----RSTLPWN--SLMDRMMKELHSQGKTVEDIANCLRQ-C   70 (265)
Q Consensus         6 iifD~DGTL~ds~~~~~~~~~~~~~-~-~------~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~   70 (265)
                      +++||.|-+.-.+....++..+-.. . .      +..+    .++-++.  .-..-+...+...|.+.+.+++.... .
T Consensus         3 fvtD~EGP~sl~D~A~E~~a~~~pngrrfF~~~SeyDD~la~E~rReGYeaG~TLkLivPFL~ahGVt~~dlrr~sE~sa   82 (315)
T COG4030           3 FVTDWEGPWSLTDFALELCAAVFPNGRRFFSNLSEYDDYLAYEVRREGYEAGYTLKLIVPFLAAHGVTNRDLRRISELSA   82 (315)
T ss_pred             ccccCCCCCccchhHHHHHHHHcCCHHHHHHhhhhhhhHHHHHHhccCCCCCcchhhHHHHHHHhcCcHHHHHHHHHhhc
Confidence            7899999999887655544443222 1 1      1111    1111111  01122334455668888888776654 7


Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceE-----------------E-
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLR-----------------I-  132 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~-----------------~-  132 (265)
                      ++.||+.+.++.|.++ +.-+++|.+...++.+.....|+..-  .+++.+..+|+--.+.                 . 
T Consensus        83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg--~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~ge  159 (315)
T COG4030          83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRG--ELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGE  159 (315)
T ss_pred             ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCcc--ccccccccCccccCChHHHHHHHHhcCccccccHH
Confidence            8999999999999997 77788898999999999999887422  3344333333100000                 0 


Q ss_pred             ------eeccccccCCCcc-ccc----CC-CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCC-eeeecCC
Q 044617          133 ------LPYHDSTLSHHGC-NLC----PS-NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCD-FVMPRKN  199 (265)
Q Consensus       133 ------~~~~~~~~kp~~~-~~~----~~-~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~-~~~~~~~  199 (265)
                            .... ...-|... ++|    .. |..|...++.+++-.+++.. +++||||.+|+.|.+.+...+ ++++..|
T Consensus       160 elfe~lDe~F-~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~s-a~~VGDSItDv~ml~~~rgrGglAvaFNG  237 (315)
T COG4030         160 ELFEKLDELF-SRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFS-AVVVGDSITDVKMLEAARGRGGLAVAFNG  237 (315)
T ss_pred             HHHHHHHHHH-hhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcc-eeEecCcccchHHHHHhhccCceEEEecC
Confidence                  0000 00011111 111    12 33467788888888777765 899999999999988776655 5555544

>PRK10671 copA copper exporting ATPase; Provisional

Probab=98.52  E-value=5.2e-07  Score=87.45  Aligned_cols=117  Identities=19%  Similarity=0.146  Sum_probs=82.2

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      -+++|++.+.|++|+++|++++++|+.....++.+++++|+.++    ++.   ..        |.              
T Consensus       649 d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~~----~~~---~~--------p~--------------  699 (834)
T PRK10671        649 DPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDEV----IAG---VL--------PD--------------  699 (834)
T ss_pred             CcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCEE----EeC---CC--------HH--------------
Confidence            36789999999999999999999999999999999999998643    331   00        11              


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI  229 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  229 (265)
                         .|...++.+.    ..+++++||||+.||+.++++   +++.++-+ .+......    ..+..+ ..+++.+|...
T Consensus       700 ---~K~~~i~~l~----~~~~~v~~vGDg~nD~~al~~---Agvgia~g-~g~~~a~~----~ad~vl-~~~~~~~i~~~  763 (834)
T PRK10671        700 ---GKAEAIKRLQ----SQGRQVAMVGDGINDAPALAQ---ADVGIAMG-GGSDVAIE----TAAITL-MRHSLMGVADA  763 (834)
T ss_pred             ---HHHHHHHHHh----hcCCEEEEEeCCHHHHHHHHh---CCeeEEec-CCCHHHHH----hCCEEE-ecCCHHHHHHH
Confidence               2777666654    346799999999999999955   44455433 22222121    122322 23888888888


Q ss_pred             HH
Q 044617          230 LL  231 (265)
Q Consensus       230 l~  231 (265)
                      ++
T Consensus       764 i~  765 (834)
T PRK10671        764 LA  765 (834)
T ss_pred             HH
Confidence            76

>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.52  E-value=7.4e-07  Score=83.65  Aligned_cols=116  Identities=15%  Similarity=0.143  Sum_probs=84.4

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      -++.|++++.++.|+++|+++.++|+.....++.+.+++|+++++..+.               |.              
T Consensus       536 D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~v~Aell---------------Pe--------------  586 (713)
T COG2217         536 DELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDEVRAELL---------------PE--------------  586 (713)
T ss_pred             CCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHhheccCC---------------cH--------------
Confidence            3789999999999999999999999999999999999999864432211               22              


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC-CchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN-YPLWDRICSNPMLIKAKVHEWSSAEELKK  228 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~el~~  228 (265)
                         .|.+.++++.++.    ..+.|||||.||-.+.   ..+++.++-+. .....  +    ..|..+.. +++..|..
T Consensus       587 ---dK~~~V~~l~~~g----~~VamVGDGINDAPAL---A~AdVGiAmG~GtDvA~--e----aADvvL~~-~dL~~v~~  649 (713)
T COG2217         587 ---DKAEIVRELQAEG----RKVAMVGDGINDAPAL---AAADVGIAMGSGTDVAI--E----AADVVLMR-DDLSAVPE  649 (713)
T ss_pred             ---HHHHHHHHHHhcC----CEEEEEeCCchhHHHH---hhcCeeEeecCCcHHHH--H----hCCEEEec-CCHHHHHH
Confidence               2999999988653    5799999999999887   56777777553 22221  1    23333322 56666666


Q ss_pred             HHH
Q 044617          229 ILL  231 (265)
Q Consensus       229 ~l~  231 (265)
                      .++
T Consensus       650 ai~  652 (713)
T COG2217         650 AID  652 (713)
T ss_pred             HHH
Confidence            543

>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice

Probab=98.48  E-value=3.3e-06  Score=68.94  Aligned_cols=121  Identities=20%  Similarity=0.167  Sum_probs=75.3

Q ss_pred             CCCCHHHHHHHhc--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           56 QGKTVEDIANCLR--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        56 ~~~~~~~~~~~~~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      .+...+.+.+.+.  .+.+.+|+.++++.|+++++|+.|.|+|....+..++++.+....=-.|++|...+|++|.+...
T Consensus        73 ~~l~k~~i~~~V~~s~i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF  152 (246)
T PF05822_consen   73 QGLTKSEIEEAVKESDIMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGF  152 (246)
T ss_dssp             HT-BGGGHHHHHHCS---B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE
T ss_pred             cCcCHHHHHHHHHhcchhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeec
Confidence            3555555655554  56789999999999999999999999999999999999987543323699999999988887753


Q ss_pred             eccccccCCCcccccCCCCchHHHHH---HHHHhcCCCCceEEEEcCCCCCcccccCC
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLD---HVCTSFGCGKQRFIYLGDGRGDFCPTLKL  188 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~---~~~~~~gi~~~~~v~vGD~~~Di~~a~~~  188 (265)
                      ..+..    |.       .+|-....   ...+++. ...+++..||+..|+.|+..+
T Consensus       153 ~~~lI----H~-------~NKn~~~l~~~~~~~~~~-~R~NvlLlGDslgD~~Ma~G~  198 (246)
T PF05822_consen  153 KGPLI----HT-------FNKNESALEDSPYFKQLK-KRTNVLLLGDSLGDLHMADGV  198 (246)
T ss_dssp             -SS-------T-------T-HHHHHHTTHHHHHCTT-T--EEEEEESSSGGGGTTTT-
T ss_pred             CCCce----EE-------eeCCcccccCchHHHHhc-cCCcEEEecCccCChHhhcCC
Confidence            21110    10       12443222   2223322 346899999999999999644

The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.

>PLN03017 trehalose-phosphatase

Probab=98.47  E-value=1.3e-05  Score=69.49  Aligned_cols=79  Identities=23%  Similarity=0.206  Sum_probs=53.1

Q ss_pred             CCCchHHHHHHHHHhcCCCC---ceEEEEcCCCCCcccccCCCC--CCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGK---QRFIYLGDGRGDFCPTLKLRD--CDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~---~~~v~vGD~~~Di~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .+.+|+.+++.+++.++...   .-.+|+||-.+|-.+-+.+..  .++.+.-+ ..      ..+..+...   .+++.
T Consensus       280 ~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG-~~------~k~T~A~y~---L~dp~  349 (366)
T PLN03017        280 IEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVS-KF------PKDTDASYS---LQDPS  349 (366)
T ss_pred             CCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEEC-CC------CCCCcceEe---CCCHH
Confidence            47889999999999987542   358999999999988765432  12332211 10      011222333   39999


Q ss_pred             HHHHHHHHHHHhhc
Q 044617          225 ELKKILLHLIGAIS  238 (265)
Q Consensus       225 el~~~l~~~~~~~~  238 (265)
                      |+.++|+.+..+..
T Consensus       350 eV~~fL~~L~~~~~  363 (366)
T PLN03017        350 EVMDFLARLVEWKQ  363 (366)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999987643

>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]

Probab=98.44  E-value=1.7e-06  Score=67.81  Aligned_cols=78  Identities=9%  Similarity=0.151  Sum_probs=56.3

Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI  229 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  229 (265)
                      |...+..++.+++.+|++|++++||||-. .|+-.|.++|+.++.+-.+-|...+..+. +..++...   ++|.|-.++
T Consensus       180 GKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgGAq~~GMrgilVkTGK~rpsDe~k~-~~~p~~~~---d~f~~AVd~  255 (262)
T KOG3040|consen  180 GKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGGAQACGMRGILVKTGKFRPSDEEKP-PVPPDLTA---DNFADAVDL  255 (262)
T ss_pred             cCCCHHHHHHHHHhcCCChHHheEEccccccchhhHhhhcceeEEeeccccCCcccccC-CCCcchhh---hhHHHHHHH
Confidence            34467889999999999999999999985 78889999999999988776665443321 11233334   777775555


Q ss_pred             HHH
Q 044617          230 LLH  232 (265)
Q Consensus       230 l~~  232 (265)
                      |-+
T Consensus       256 I~q  258 (262)
T KOG3040|consen  256 IIQ  258 (262)
T ss_pred             HHh
Confidence            443

>TIGR01675 plant-AP plant acid phosphatase

Probab=98.44  E-value=5.3e-06  Score=67.40  Aligned_cols=45  Identities=13%  Similarity=0.096  Sum_probs=38.3

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHhcCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFY---IETIMEHHGLLGC  113 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~---i~~~l~~~gl~~~  113 (265)
                      ..+..|+++++++.++++|++++++|++....   +...|...|+..+
T Consensus       118 ~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~  165 (229)
T TIGR01675       118 AAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW  165 (229)
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc
Confidence            56789999999999999999999999998665   6666778887654

This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.

>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase

Probab=98.39  E-value=1.7e-06  Score=63.80  Aligned_cols=48  Identities=23%  Similarity=0.312  Sum_probs=36.8

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHH---------------HHHHHHhcCcccccceEEe
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFY---------------IETIMEHHGLLGCFSEIYT  119 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~---------------i~~~l~~~gl~~~f~~i~~  119 (265)
                      ..+.+++.+.|+.++++|+.++++|++....               +...++..++.  ++.++-
T Consensus        23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ip--Yd~l~~   85 (126)
T TIGR01689        23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVP--YDEIYV   85 (126)
T ss_pred             cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCC--CceEEe
Confidence            3578999999999999999999999986653               45566677765  455554

Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.

>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25)

Probab=98.37  E-value=1.3e-06  Score=71.58  Aligned_cols=90  Identities=16%  Similarity=0.189  Sum_probs=57.8

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQF---YIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~---~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      .+..||+.++++.++++|+.++++||+...   ....-|+..|+..+ +.++-.             +.... .+.    
T Consensus       114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~-~~l~lr-------------~~~~~-~~~----  174 (229)
T PF03767_consen  114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW-DHLILR-------------PDKDP-SKK----  174 (229)
T ss_dssp             GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB-SCGEEE-------------EESST-SS-----
T ss_pred             CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc-chhccc-------------ccccc-ccc----
Confidence            367899999999999999999999997654   44455677786543 222211             00000 000    


Q ss_pred             ccCCCCchHHHHHHHHHh-cCCCCceEEEEcCCCCCccc
Q 044617          147 LCPSNLCKGFVLDHVCTS-FGCGKQRFIYLGDGRGDFCP  184 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~-~gi~~~~~v~vGD~~~Di~~  184 (265)
                        .....|......+.++ +.|    +.+|||..+|+..
T Consensus       175 --~~~~yK~~~r~~i~~~Gy~I----i~~iGD~~~D~~~  207 (229)
T PF03767_consen  175 --SAVEYKSERRKEIEKKGYRI----IANIGDQLSDFSG  207 (229)
T ss_dssp             -------SHHHHHHHHHTTEEE----EEEEESSGGGCHC
T ss_pred             --cccccchHHHHHHHHcCCcE----EEEeCCCHHHhhc
Confidence              0112267777777776 433    7799999999987

The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....

>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458

Probab=98.37  E-value=2.1e-06  Score=71.76  Aligned_cols=49  Identities=12%  Similarity=0.139  Sum_probs=38.0

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHHHhcCcccccceEEe
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQF---YIETIMEHHGLLGCFSEIYT  119 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~---~i~~~l~~~gl~~~f~~i~~  119 (265)
                      .+.|++.+.|+.|+++|++++++||+...   .+...++.+|+.--.+.+++
T Consensus        21 ~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~t   72 (257)
T TIGR01458        21 VAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFT   72 (257)
T ss_pred             CcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEc
Confidence            37899999999999999999999997554   46666777887533445555

This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.

>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase

Probab=98.34  E-value=3.8e-06  Score=81.89  Aligned_cols=136  Identities=13%  Similarity=0.050  Sum_probs=84.6

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCC---------ceEEeeccccccC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQG---------RLRILPYHDSTLS  141 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~---------~~~~~~~~~~~~k  141 (265)
                      +++|++++.++.|++.|+++.++||.....+..+.+.+|+...+..+++.... +.-.         ...+....    .
T Consensus       528 p~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~~v~g~~l-~~~~~~~l~~~~~~~~Vfar~----~  602 (884)
T TIGR01522       528 PPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQSVSGEKL-DAMDDQQLSQIVPKVAVFARA----S  602 (884)
T ss_pred             cchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCceeEhHHh-HhCCHHHHHHHhhcCeEEEEC----C
Confidence            67999999999999999999999999999999999999997665544332110 0000         00000000    0


Q ss_pred             CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCC
Q 044617          142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWS  221 (265)
Q Consensus       142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
                      |         ..|...++.+.+ .   .+.+.|+|||.||..|+++   ++++++-+ ....+..++   .++..+. -+
T Consensus       603 P---------~~K~~iv~~lq~-~---g~~v~mvGDGvND~pAl~~---AdVGia~g-~~g~~va~~---aaDivl~-dd  661 (884)
T TIGR01522       603 P---------EHKMKIVKALQK-R---GDVVAMTGDGVNDAPALKL---ADIGVAMG-QTGTDVAKE---AADMILT-DD  661 (884)
T ss_pred             H---------HHHHHHHHHHHH-C---CCEEEEECCCcccHHHHHh---CCeeEecC-CCcCHHHHH---hcCEEEc-CC
Confidence            1         126566655443 2   3689999999999999954   55666542 211222221   1234332 26


Q ss_pred             CHHHHHHHHHH
Q 044617          222 SAEELKKILLH  232 (265)
Q Consensus       222 ~~~el~~~l~~  232 (265)
                      ++..|...++.
T Consensus       662 ~~~~i~~~i~~  672 (884)
T TIGR01522       662 DFATILSAIEE  672 (884)
T ss_pred             CHHHHHHHHHH
Confidence            68887776543

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.

>TIGR01497 kdpB K+-transporting ATPase, B subunit

Probab=98.34  E-value=2.6e-06  Score=79.71  Aligned_cols=115  Identities=11%  Similarity=0.089  Sum_probs=82.6

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      ++.|++++.+++|++.|+++.++|+.....+..+.+++|+.+    +++.   ..        |.               
T Consensus       446 ~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~~----v~a~---~~--------Pe---------------  495 (675)
T TIGR01497       446 IVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDD----FIAE---AT--------PE---------------  495 (675)
T ss_pred             cchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCE----EEcC---CC--------HH---------------
Confidence            688999999999999999999999999999999999999853    3442   00        22               


Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWSSAEELKKI  229 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  229 (265)
                        +|...++.+.++-    ..+.|+||+.||..+.   ..++++++-. |...   .++.   .+... --+||..|.+.
T Consensus       496 --dK~~~v~~lq~~g----~~VamvGDG~NDapAL---~~AdvGiAm~~gt~~---akea---adivL-ldd~~s~Iv~a  559 (675)
T TIGR01497       496 --DKIALIRQEQAEG----KLVAMTGDGTNDAPAL---AQADVGVAMNSGTQA---AKEA---ANMVD-LDSDPTKLIEV  559 (675)
T ss_pred             --HHHHHHHHHHHcC----CeEEEECCCcchHHHH---HhCCEeEEeCCCCHH---HHHh---CCEEE-CCCCHHHHHHH
Confidence              2888998886653    4699999999999888   4566666643 2222   2221   12322 23677777665


Q ss_pred             HH
Q 044617          230 LL  231 (265)
Q Consensus       230 l~  231 (265)
                      ++
T Consensus       560 v~  561 (675)
T TIGR01497       560 VH  561 (675)
T ss_pred             HH
Confidence            54

One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.

>PRK01122 potassium-transporting ATPase subunit B; Provisional

Probab=98.33  E-value=3.2e-06  Score=79.26  Aligned_cols=116  Identities=11%  Similarity=0.064  Sum_probs=83.5

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      ++.||+++.+++|++.|+++.++|+.+...+..+.+++|+++    +++.-           .|.               
T Consensus       445 ~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId~----v~A~~-----------~Pe---------------  494 (679)
T PRK01122        445 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD----FLAEA-----------TPE---------------  494 (679)
T ss_pred             cCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcE----EEccC-----------CHH---------------
Confidence            678999999999999999999999999999999999999853    44420           022               


Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWSSAEELKKI  229 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  229 (265)
                        .|...++.+.++-    +-+.|+|||.||..+.   ..++++++-+ |....+   +   ..+... .-+||.-|.+.
T Consensus       495 --dK~~iV~~lQ~~G----~~VaMtGDGvNDAPAL---a~ADVGIAMgsGTdvAk---e---AADiVL-ldd~~s~Iv~a  558 (679)
T PRK01122        495 --DKLALIRQEQAEG----RLVAMTGDGTNDAPAL---AQADVGVAMNSGTQAAK---E---AGNMVD-LDSNPTKLIEV  558 (679)
T ss_pred             --HHHHHHHHHHHcC----CeEEEECCCcchHHHH---HhCCEeEEeCCCCHHHH---H---hCCEEE-eCCCHHHHHHH
Confidence              2888888877642    4588999999999888   4566666644 322222   2   123333 23678777776


Q ss_pred             HHH
Q 044617          230 LLH  232 (265)
Q Consensus       230 l~~  232 (265)
                      ++.
T Consensus       559 v~~  561 (679)
T PRK01122        559 VEI  561 (679)
T ss_pred             HHH
Confidence            543

>PLN02151 trehalose-phosphatase

Probab=98.33  E-value=2e-05  Score=68.14  Aligned_cols=79  Identities=22%  Similarity=0.186  Sum_probs=52.0

Q ss_pred             CCCchHHHHHHHHHhcCCCCc---eEEEEcCCCCCcccccCCCC--CCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQ---RFIYLGDGRGDFCPTLKLRD--CDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~---~~v~vGD~~~Di~~a~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .+.+|+.+++.++++++..-.   -.+|+||-.+|-.+-+.+..  .++.+.-. ..      ..+..+...+   .++.
T Consensus       266 ~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~------~k~T~A~y~L---~dp~  335 (354)
T PLN02151        266 IKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KY------AKETNASYSL---QEPD  335 (354)
T ss_pred             CCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cC------CCCCcceEeC---CCHH
Confidence            478999999999999875422   38999999999887654432  12222211 00      0122233334   9999


Q ss_pred             HHHHHHHHHHHhhc
Q 044617          225 ELKKILLHLIGAIS  238 (265)
Q Consensus       225 el~~~l~~~~~~~~  238 (265)
                      |+.++|..+..+..
T Consensus       336 eV~~~L~~L~~~~~  349 (354)
T PLN02151        336 EVMEFLERLVEWKQ  349 (354)
T ss_pred             HHHHHHHHHHHhhh
Confidence            99999999887643

>PRK14010 potassium-transporting ATPase subunit B; Provisional

Probab=98.33  E-value=2.9e-06  Score=79.45  Aligned_cols=115  Identities=13%  Similarity=0.121  Sum_probs=82.3

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      ++.|++++.+++|++.|+++.++|+.+...+..+.+++|+.+    +++.   .        .|.+              
T Consensus       441 p~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~~----v~A~---~--------~Ped--------------  491 (673)
T PRK14010        441 VIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVDR----FVAE---C--------KPED--------------  491 (673)
T ss_pred             CCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCce----EEcC---C--------CHHH--------------
Confidence            789999999999999999999999999999999999999864    3442   0        0222              


Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWSSAEELKKI  229 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  229 (265)
                         |...++.+.++    -+.+.|+|||.||..+.   ..++++++-+ |....   ++.   .+... .-+|+..|.+.
T Consensus       492 ---K~~iV~~lQ~~----G~~VaMtGDGvNDAPAL---a~ADVGIAMgsGTdvA---keA---ADiVL-ldd~ls~Iv~a  554 (673)
T PRK14010        492 ---KINVIREEQAK----GHIVAMTGDGTNDAPAL---AEANVGLAMNSGTMSA---KEA---ANLID-LDSNPTKLMEV  554 (673)
T ss_pred             ---HHHHHHHHHhC----CCEEEEECCChhhHHHH---HhCCEEEEeCCCCHHH---HHh---CCEEE-cCCCHHHHHHH
Confidence               88888887654    24688999999999888   4567666654 32222   221   22332 22667776665


Q ss_pred             HH
Q 044617          230 LL  231 (265)
Q Consensus       230 l~  231 (265)
                      ++
T Consensus       555 v~  556 (673)
T PRK14010        555 VL  556 (673)
T ss_pred             HH
Confidence            54

>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional

Probab=98.29  E-value=2e-06  Score=82.18  Aligned_cols=115  Identities=14%  Similarity=0.069  Sum_probs=80.1

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      -+++|++.+.|++|+++|++++++|+.....+..+.+++|+..+     ..   ..        |.              
T Consensus       567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~~~-----~~---~~--------p~--------------  616 (741)
T PRK11033        567 DTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGIDFR-----AG---LL--------PE--------------  616 (741)
T ss_pred             cCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCee-----cC---CC--------HH--------------
Confidence            37899999999999999999999999999999999999998521     11   00        11              


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI  229 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  229 (265)
                         .|+..++.+.+.     .+++||||+.||..++++   +++.++-++ +... ..+   ..++.+ ..+++.+|...
T Consensus       617 ---~K~~~v~~l~~~-----~~v~mvGDgiNDapAl~~---A~vgia~g~-~~~~-a~~---~adivl-~~~~l~~l~~~  679 (741)
T PRK11033        617 ---DKVKAVTELNQH-----APLAMVGDGINDAPAMKA---ASIGIAMGS-GTDV-ALE---TADAAL-THNRLRGLAQM  679 (741)
T ss_pred             ---HHHHHHHHHhcC-----CCEEEEECCHHhHHHHHh---CCeeEEecC-CCHH-HHH---hCCEEE-ecCCHHHHHHH
Confidence               288888877532     579999999999999854   445555432 2221 211   123333 23777777755


Q ss_pred             HH
Q 044617          230 LL  231 (265)
Q Consensus       230 l~  231 (265)
                      +.
T Consensus       680 i~  681 (741)
T PRK11033        680 IE  681 (741)
T ss_pred             HH
Confidence            43

>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins

Probab=98.26  E-value=1.5e-05  Score=65.73  Aligned_cols=111  Identities=17%  Similarity=0.113  Sum_probs=73.6

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCC-ceEEe--eccccccCCCccccc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQG-RLRIL--PYHDSTLSHHGCNLC  148 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~-~~~~~--~~~~~~~kp~~~~~~  148 (265)
                      ..|.+.+.|..|+++|..+++=|-|..+.+...++.+++..+|+.+++.+-...+.. .....  ....-..+|+-.+.-
T Consensus       143 r~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~~~~L~~~Fd~ii~~G~~~~~~~~~~~~d~~~~~~f~~~~FylDv~  222 (297)
T PF05152_consen  143 RDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLKELKLEGYFDIIICGGNKAGEYNSRVIVDRQYKVIFVSKPFYLDVT  222 (297)
T ss_pred             CChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHhCCccccEEEEeCCccCCcCCccceeecccceEEeccceEEeCC
Confidence            368899999999999999999999999999999999999999999998643322111 10000  000001123222221


Q ss_pred             CC-CCch-HHHHHHHHHhcCCCCc-eEEEEcCCC-CCc
Q 044617          149 PS-NLCK-GFVLDHVCTSFGCGKQ-RFIYLGDGR-GDF  182 (265)
Q Consensus       149 ~~-~~~K-~~~i~~~~~~~gi~~~-~~v~vGD~~-~Di  182 (265)
                      .. +..| |.++...+++.|+..- -+..|.|=. ||+
T Consensus       223 ~~~~LPKSPrVVL~yL~k~gvny~KtiTLVDDL~~Nn~  260 (297)
T PF05152_consen  223 NVNNLPKSPRVVLWYLRKKGVNYFKTITLVDDLKSNNY  260 (297)
T ss_pred             cCCCCCCCCeehHHHHHHcCCceeeeEEEeccCcccCc
Confidence            11 1334 6899999999998864 455777753 555

>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear

Probab=98.18  E-value=7.5e-06  Score=63.26  Aligned_cols=85  Identities=12%  Similarity=0.163  Sum_probs=55.4

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc-ccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL-LGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl-~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      .+.+.||+.++|+.+.+. +.++|.|++...++..+++.++- ..+|..+++........+.                  
T Consensus        34 ~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ldp~~~~~~~~~~r~~~~~~~~~------------------   94 (159)
T PF03031_consen   34 YVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALDPNGKLFSRRLYRDDCTFDKGS------------------   94 (159)
T ss_dssp             EEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHTTTTSSEEEEEEGGGSEEETTE------------------
T ss_pred             eEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhhhhccccccccccccccccccc------------------
Confidence            356789999999999775 99999999999999999999886 4567777764211000000                  


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCc
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDF  182 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di  182 (265)
                            .   + +-++..|-+++++++|.|++.-.
T Consensus        95 ------~---~-KdL~~l~~~~~~vvivDD~~~~~  119 (159)
T PF03031_consen   95 ------Y---I-KDLSKLGRDLDNVVIVDDSPRKW  119 (159)
T ss_dssp             ------E---E---GGGSSS-GGGEEEEES-GGGG
T ss_pred             ------c---c-cchHHHhhccccEEEEeCCHHHe
Confidence                  0   0 22444466789999999997644

It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....

>TIGR01680 Veg_Stor_Prot vegetative storage protein

Probab=98.17  E-value=4e-05  Score=63.48  Aligned_cols=45  Identities=16%  Similarity=0.130  Sum_probs=35.6

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHhcCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFY---IETIMEHHGLLGC  113 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~---i~~~l~~~gl~~~  113 (265)
                      ..+..|+++++++.++++|++++++||+....   ...-|+..|+..+
T Consensus       143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~  190 (275)
T TIGR01680       143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW  190 (275)
T ss_pred             cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc
Confidence            56778999999999999999999999997543   4444566777543

The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=98.10  E-value=2.8e-05  Score=73.28  Aligned_cols=116  Identities=14%  Similarity=0.166  Sum_probs=83.8

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      .+.|++...+..|+++|++++++|+.....++.+.++.|    ++.|++.-           .|.               
T Consensus       723 ~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG----i~~V~aev-----------~P~---------------  772 (951)
T KOG0207|consen  723 QVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG----IDNVYAEV-----------LPE---------------  772 (951)
T ss_pred             ccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC----cceEEecc-----------Cch---------------
Confidence            678999999999999999999999999999999999999    55777731           022               


Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWSSAEELKKI  229 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  229 (265)
                        .|.+.++.+.+.-    ..+.|||||.||-.+.   ..++++++-. |....  .+    ..+... --++..++...
T Consensus       773 --~K~~~Ik~lq~~~----~~VaMVGDGINDaPAL---A~AdVGIaig~gs~vA--ie----aADIVL-mrn~L~~v~~a  836 (951)
T KOG0207|consen  773 --QKAEKIKEIQKNG----GPVAMVGDGINDAPAL---AQADVGIAIGAGSDVA--IE----AADIVL-MRNDLRDVPFA  836 (951)
T ss_pred             --hhHHHHHHHHhcC----CcEEEEeCCCCccHHH---HhhccceeeccccHHH--Hh----hCCEEE-EccchhhhHHH
Confidence              2888999888764    5699999999999777   4566555543 22221  11    122222 22667777776


Q ss_pred             HHH
Q 044617          230 LLH  232 (265)
Q Consensus       230 l~~  232 (265)
                      +.-
T Consensus       837 i~L  839 (951)
T KOG0207|consen  837 IDL  839 (951)
T ss_pred             HHH
Confidence            653

>PRK15122 magnesium-transporting ATPase; Provisional

Probab=98.09  E-value=1.7e-05  Score=77.44  Aligned_cols=133  Identities=20%  Similarity=0.215  Sum_probs=83.2

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec-Cce-ecCC------CceEEeeccccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN-PTY-VDEQ------GRLRILPYHDSTLSH  142 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~-~~~-~d~~------~~~~~~~~~~~~~kp  142 (265)
                      ++.|++++.++.|++.|+++.++|+.....+..+.+++|+..  +.+++. +.. .++.      ....+...    ..|
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~~vi~G~el~~~~~~el~~~v~~~~VfAr----~sP  623 (903)
T PRK15122        550 PPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--GEPLLGTEIEAMDDAALAREVEERTVFAK----LTP  623 (903)
T ss_pred             ccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--CCccchHhhhhCCHHHHHHHhhhCCEEEE----eCH
Confidence            678999999999999999999999999999999999999852  122211 100 0000      00000000    011


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWS  221 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
                               ..|...++.+.++    -+.+.|+|||.||..+.   +.++++++-+ |....+   +   ..+.... -+
T Consensus       624 ---------e~K~~iV~~Lq~~----G~vVamtGDGvNDaPAL---k~ADVGIAmg~gtdvAk---e---aADiVLl-dd  680 (903)
T PRK15122        624 ---------LQKSRVLKALQAN----GHTVGFLGDGINDAPAL---RDADVGISVDSGADIAK---E---SADIILL-EK  680 (903)
T ss_pred             ---------HHHHHHHHHHHhC----CCEEEEECCCchhHHHH---HhCCEEEEeCcccHHHH---H---hcCEEEe-cC
Confidence                     2288888877654    25688999999999888   4566666644 332222   1   2334332 26


Q ss_pred             CHHHHHHHHHH
Q 044617          222 SAEELKKILLH  232 (265)
Q Consensus       222 ~~~el~~~l~~  232 (265)
                      |+..|...++.
T Consensus       681 ~f~~Iv~ai~~  691 (903)
T PRK15122        681 SLMVLEEGVIK  691 (903)
T ss_pred             ChHHHHHHHHH
Confidence            77776665543

>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase

Probab=98.09  E-value=2.1e-05  Score=76.55  Aligned_cols=132  Identities=16%  Similarity=0.212  Sum_probs=83.1

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec-Cce-ecCC------CceEEeeccccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN-PTY-VDEQ------GRLRILPYHDSTLSH  142 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~-~~~-~d~~------~~~~~~~~~~~~~kp  142 (265)
                      ++.|++++.++.|++.|+++.++|+.....+..+.+++|+..-  .++.. +.. .++.      ....+...    ..|
T Consensus       515 p~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~--~v~~g~~l~~~~~~el~~~~~~~~vfAr----~~P  588 (867)
T TIGR01524       515 PPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN--DFLLGADIEELSDEELARELRKYHIFAR----LTP  588 (867)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC--CeeecHhhhhCCHHHHHHHhhhCeEEEE----CCH
Confidence            6789999999999999999999999999999999999998521  22221 100 0000      00001000    011


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWS  221 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
                               ..|...++.+.++ |   +.+.|+|||.||..+.   +.++++++-+ |....   ++   ..+.... -+
T Consensus       589 ---------e~K~~iV~~lq~~-G---~vVam~GDGvNDapAL---k~AdVGIAmg~gtdvA---k~---aADiVLl-dd  645 (867)
T TIGR01524       589 ---------MQKSRIIGLLKKA-G---HTVGFLGDGINDAPAL---RKADVGISVDTAADIA---KE---ASDIILL-EK  645 (867)
T ss_pred             ---------HHHHHHHHHHHhC-C---CEEEEECCCcccHHHH---HhCCEEEEeCCccHHH---HH---hCCEEEe-cC
Confidence                     2388888877654 2   5788999999999888   4566666644 22222   21   2234332 26


Q ss_pred             CHHHHHHHHH
Q 044617          222 SAEELKKILL  231 (265)
Q Consensus       222 ~~~el~~~l~  231 (265)
                      ++..|...++
T Consensus       646 ~~~~I~~ai~  655 (867)
T TIGR01524       646 SLMVLEEGVI  655 (867)
T ss_pred             ChHHHHHHHH
Confidence            7777766554

The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.

>PRK10517 magnesium-transporting ATPase MgtA; Provisional

Probab=98.06  E-value=2.2e-05  Score=76.54  Aligned_cols=133  Identities=17%  Similarity=0.235  Sum_probs=83.1

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec-Cce-ecCC------CceEEeeccccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN-PTY-VDEQ------GRLRILPYHDSTLSH  142 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~-~~~-~d~~------~~~~~~~~~~~~~kp  142 (265)
                      ++.|++++.++.|++.|+++.++|+.+...+..+.+++|+..  +.+++. +.. .++.      ....+...    ..|
T Consensus       550 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~~v~~G~el~~l~~~el~~~~~~~~VfAr----~sP  623 (902)
T PRK10517        550 PPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--GEVLIGSDIETLSDDELANLAERTTLFAR----LTP  623 (902)
T ss_pred             cchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--cCceeHHHHHhCCHHHHHHHHhhCcEEEE----cCH
Confidence            678999999999999999999999999999999999999852  122221 100 0000      00000000    011


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWS  221 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
                               ..|...++.+.++ |   +.+.|+|||.||..+.   ..++++++-+ |...   .++   ..+.... -+
T Consensus       624 ---------e~K~~IV~~Lq~~-G---~vVam~GDGvNDaPAL---k~ADVGIAmg~gtdv---Ake---aADiVLl-dd  680 (902)
T PRK10517        624 ---------MHKERIVTLLKRE-G---HVVGFMGDGINDAPAL---RAADIGISVDGAVDI---ARE---AADIILL-EK  680 (902)
T ss_pred             ---------HHHHHHHHHHHHC-C---CEEEEECCCcchHHHH---HhCCEEEEeCCcCHH---HHH---hCCEEEe-cC
Confidence                     2388888877653 2   5688999999999888   4566666654 2222   221   2234332 26


Q ss_pred             CHHHHHHHHHH
Q 044617          222 SAEELKKILLH  232 (265)
Q Consensus       222 ~~~el~~~l~~  232 (265)
                      |+..|.+.++.
T Consensus       681 ~~~~I~~ai~~  691 (902)
T PRK10517        681 SLMVLEEGVIE  691 (902)
T ss_pred             ChHHHHHHHHH
Confidence            77776665543

>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=98.05  E-value=5.9e-05  Score=59.92  Aligned_cols=44  Identities=25%  Similarity=0.297  Sum_probs=30.0

Q ss_pred             CchHHHHHHHHHhcC-CCCce-EEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          152 LCKGFVLDHVCTSFG-CGKQR-FIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       152 ~~K~~~i~~~~~~~g-i~~~~-~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      .+|..+.+.+++.+. ....+ ++.+|||.||+.+.   ...+.+|.-.
T Consensus       190 ~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~nD~Pl~---ev~d~AfiV~  235 (274)
T COG3769         190 AGKGQAANWLLETYRRLGGARTTLGLGDGPNDAPLL---EVMDYAFIVK  235 (274)
T ss_pred             cCccHHHHHHHHHHHhcCceeEEEecCCCCCcccHH---Hhhhhheeec
Confidence            347777777777664 44445 89999999999888   3445455433

>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase

Probab=98.04  E-value=4.3e-05  Score=74.88  Aligned_cols=134  Identities=14%  Similarity=0.130  Sum_probs=80.0

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccc----eEEecCceecCC---------CceEEeeccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFS----EIYTNPTYVDEQ---------GRLRILPYHD  137 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~----~i~~~~~~~d~~---------~~~~~~~~~~  137 (265)
                      ++++++.+.|+.|++.|+++.++|+.....+..+.+..|+...-.    ..++.. .++.-         ....+...  
T Consensus       537 plr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~-~l~~~~~~~~~~~~~~~~v~ar--  613 (917)
T TIGR01116       537 PPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGR-EFDEMGPAKQRAACRSAVLFSR--  613 (917)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHH-HHhhCCHHHHHHhhhcCeEEEe--
Confidence            679999999999999999999999999999999999999853111    111110 00000         00000000  


Q ss_pred             cccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEE
Q 044617          138 STLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKV  217 (265)
Q Consensus       138 ~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (265)
                        ..|         ..|...++.+. +.   .+.+.|+|||.||+.|.+   .++++++-+ .+. +..++   .++..+
T Consensus       614 --~~P---------~~K~~iV~~lq-~~---g~~va~iGDG~ND~~alk---~AdVGia~g-~g~-~~ak~---aAD~vl  670 (917)
T TIGR01116       614 --VEP---------SHKSELVELLQ-EQ---GEIVAMTGDGVNDAPALK---KADIGIAMG-SGT-EVAKE---ASDMVL  670 (917)
T ss_pred             --cCH---------HHHHHHHHHHH-hc---CCeEEEecCCcchHHHHH---hCCeeEECC-CCc-HHHHH---hcCeEE
Confidence              001         12666666443 32   467889999999999995   455565543 221 21221   233444


Q ss_pred             EeCCCHHHHHHHHH
Q 044617          218 HEWSSAEELKKILL  231 (265)
Q Consensus       218 ~~~~~~~el~~~l~  231 (265)
                      .. +||..|.+.+.
T Consensus       671 ~d-d~f~~i~~~i~  683 (917)
T TIGR01116       671 AD-DNFATIVAAVE  683 (917)
T ss_pred             cc-CCHHHHHHHHH
Confidence            22 56888777654

The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.

>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase

Probab=98.03  E-value=3.7e-05  Score=73.76  Aligned_cols=131  Identities=16%  Similarity=0.132  Sum_probs=80.9

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCc--------------eEEeecc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGR--------------LRILPYH  136 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~--------------~~~~~~~  136 (265)
                      ++.|++++.++.|++.|+++.++|+.....+..+.+++|+.+.   +++.+........              ..+... 
T Consensus       442 p~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~vfAr-  517 (755)
T TIGR01647       442 PPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN---IYTADVLLKGDNRDDLPSGELGEMVEDADGFAE-  517 (755)
T ss_pred             CChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC---CcCHHHhcCCcchhhCCHHHHHHHHHhCCEEEe-
Confidence            6789999999999999999999999999999999999998541   1111100000000              000000 


Q ss_pred             ccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeE
Q 044617          137 DSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKA  215 (265)
Q Consensus       137 ~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  215 (265)
                         ..|         ..|...++.+.++    .+.+.|+|||.||..+.   ..++++++-+ |...   .++   ..+.
T Consensus       518 ---~~P---------e~K~~iV~~lq~~----G~~VamvGDGvNDapAL---~~AdVGIAm~~gtdv---Ake---aADi  572 (755)
T TIGR01647       518 ---VFP---------EHKYEIVEILQKR----GHLVGMTGDGVNDAPAL---KKADVGIAVAGATDA---ARS---AADI  572 (755)
T ss_pred             ---cCH---------HHHHHHHHHHHhc----CCEEEEEcCCcccHHHH---HhCCeeEEecCCcHH---HHH---hCCE
Confidence               011         2377888776543    25689999999999888   4466666543 2222   221   1233


Q ss_pred             EEEeCCCHHHHHHHHH
Q 044617          216 KVHEWSSAEELKKILL  231 (265)
Q Consensus       216 ~~~~~~~~~el~~~l~  231 (265)
                      ... -+++..|...++
T Consensus       573 vLl-~d~l~~I~~ai~  587 (755)
T TIGR01647       573 VLT-EPGLSVIVDAIL  587 (755)
T ss_pred             EEE-cCChHHHHHHHH
Confidence            332 266766665544

This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.

>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria

Probab=98.03  E-value=7e-05  Score=62.24  Aligned_cols=124  Identities=15%  Similarity=0.178  Sum_probs=76.7

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH---HHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc-
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIET---IMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC-  145 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~---~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~-  145 (265)
                      ..+.+.+.++|+.++++|+++..+|.....+...   .|+.+|++  |..--     +..++.+............... 
T Consensus        80 ~lie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~--fs~~~-----~~~~~~~~~~~~~~~~~~~~~~~  152 (252)
T PF11019_consen   80 ELIESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGID--FSSSS-----FPEDGIISFPVFDSALSRAPSFY  152 (252)
T ss_pred             EEcchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCC--ccccc-----cccCcceecccccCCCCCCceee
Confidence            4557899999999999999999999987665444   44556764  33221     1111111100000000000011 


Q ss_pred             --cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC-CCCCCeeeecCCC
Q 044617          146 --NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK-LRDCDFVMPRKNY  200 (265)
Q Consensus       146 --~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~-~~~~~~~~~~~~~  200 (265)
                        -++..|.+|+.++..++.+.|..|+.+|||.|+...+..+.+ +...++.|.+.-|
T Consensus       153 ~GIlft~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~~a~k~~~I~f~G~~Y  210 (252)
T PF11019_consen  153 DGILFTGGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVEKACKKSGIDFIGFHY  210 (252)
T ss_pred             cCeEEeCCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHHHhhCCCcEEEEEE
Confidence              134667889999999999999999999999999877754433 2334555554433

The function is not known.

>COG2503 Predicted secreted acid phosphatase [General function prediction only]

Probab=97.99  E-value=6.4e-05  Score=60.57  Aligned_cols=123  Identities=18%  Similarity=0.232  Sum_probs=77.1

Q ss_pred             ceEEEEecCCCCCCCCch--HHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHh--cCCCCChhHHH
Q 044617            3 DVVVVFDFDRTLIDDDSD--NWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCL--RQCPLDSHVAA   78 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~e   78 (265)
                      .++|+.|+|-|++|....  ..+...                             .+.+.+.+..++  ......||+.+
T Consensus        79 ~~aVvlDlDETvLdNs~Yqgy~v~nn-----------------------------k~f~pe~Wd~wV~a~~sk~vpGA~e  129 (274)
T COG2503          79 KKAVVLDLDETVLDNSAYQGYQVLNN-----------------------------KGFTPETWDKWVQAKKSKAVPGAVE  129 (274)
T ss_pred             CceEEEecchHhhcCccccchhhhcC-----------------------------CCCCccchHHHHhhcccccCccHHH
Confidence            468999999999998541  111111                             122223333333  24678899999


Q ss_pred             HHHHHHHcCCcEEEEeCCCHHH----HHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCch
Q 044617           79 AIKSAHSLGCDLKIVSDANQFY----IETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCK  154 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~----i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K  154 (265)
                      ++.+..++|..++.+||+....    ...-+...|+...-..-    ..+.            ..           ..+|
T Consensus       130 Fl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~----~llk------------k~-----------~k~K  182 (274)
T COG2503         130 FLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESH----LLLK------------KD-----------KKSK  182 (274)
T ss_pred             HHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccc----eEEe------------eC-----------CCcH
Confidence            9999999999999999987664    33445667765331110    0000            01           1226


Q ss_pred             HHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617          155 GFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT  185 (265)
Q Consensus       155 ~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a  185 (265)
                      ....+.+.+.+    +-++.|||...|....
T Consensus       183 e~R~~~v~k~~----~iVm~vGDNl~DF~d~  209 (274)
T COG2503         183 EVRRQAVEKDY----KIVMLVGDNLDDFGDN  209 (274)
T ss_pred             HHHHHHHhhcc----ceeeEecCchhhhcch
Confidence            66666666644    5588999999888544

>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase

Probab=97.97  E-value=7e-05  Score=73.66  Aligned_cols=132  Identities=16%  Similarity=0.144  Sum_probs=82.6

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCC---------CceEEeeccccccC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQ---------GRLRILPYHDSTLS  141 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~---------~~~~~~~~~~~~~k  141 (265)
                      ++.|++++.++.|++.|+++.++|+.....+..+.+..|+...-..+++... ++.-         .+..+...    ..
T Consensus       579 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~-~~~l~~~el~~~i~~~~Vfar----~s  653 (941)
T TIGR01517       579 PLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKE-FRRLVYEEMDPILPKLRVLAR----SS  653 (941)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHH-hhhCCHHHHHHHhccCeEEEE----CC
Confidence            6789999999999999999999999999999999999998532112222110 0000         00000000    01


Q ss_pred             CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC--CCchhhhhhcCCCeeeEEEEe
Q 044617          142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK--NYPLWDRICSNPMLIKAKVHE  219 (265)
Q Consensus       142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~  219 (265)
                      |         ..|...++.+.++    .+.+.|+|||.||..|.   +.++++++-+  |.....   +   .++..+. 
T Consensus       654 P---------e~K~~iV~~lq~~----g~vVam~GDGvNDapAL---k~AdVGIAmg~~gtdvAk---~---aADivL~-  710 (941)
T TIGR01517       654 P---------LDKQLLVLMLKDM----GEVVAVTGDGTNDAPAL---KLADVGFSMGISGTEVAK---E---ASDIILL-  710 (941)
T ss_pred             H---------HHHHHHHHHHHHC----CCEEEEECCCCchHHHH---HhCCcceecCCCccHHHH---H---hCCEEEe-
Confidence            1         2388888887654    24789999999999888   4466666543  333222   1   2234432 


Q ss_pred             CCCHHHHHHHH
Q 044617          220 WSSAEELKKIL  230 (265)
Q Consensus       220 ~~~~~el~~~l  230 (265)
                      -+++.-|...+
T Consensus       711 dd~f~~I~~~i  721 (941)
T TIGR01517       711 DDNFASIVRAV  721 (941)
T ss_pred             cCCHHHHHHHH
Confidence            25777776665

The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.

>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []

Probab=97.93  E-value=6.1e-05  Score=57.44  Aligned_cols=106  Identities=10%  Similarity=0.012  Sum_probs=60.0

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHhc-----CcccccceEEecCceecCCCceEEeeccccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFY---IETIMEHH-----GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~---i~~~l~~~-----gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                      ..++|+.+++...+++||++.-+|+++.-.   .+..+...     ++..=  .++.+..     +.+.........++|
T Consensus        27 ~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~G--pv~~sP~-----~l~~al~rEvi~~~p   99 (157)
T PF08235_consen   27 WTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDG--PVLLSPD-----SLFSALHREVISKDP   99 (157)
T ss_pred             hhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCC--CEEECCc-----chhhhhhccccccCh
Confidence            568999999999999999999999986443   33444443     33211  2333210     000000000001112


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCc-eEEEEcCCCCCcccccCCCCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQ-RFIYLGDGRGDFCPTLKLRDC  191 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~-~~v~vGD~~~Di~~a~~~~~~  191 (265)
                              ..-|...++.+...+.-... =...+|.+.+|+.+-+++|..
T Consensus       100 --------~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip  141 (157)
T PF08235_consen  100 --------EEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP  141 (157)
T ss_pred             --------HHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence                    12267777777776541222 245789999999887665653

SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].

>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type

Probab=97.88  E-value=0.0001  Score=73.06  Aligned_cols=140  Identities=13%  Similarity=0.119  Sum_probs=81.9

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc----------ceEEecCceecCCCceEEeecccccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF----------SEIYTNPTYVDEQGRLRILPYHDSTL  140 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f----------~~i~~~~~~~d~~~~~~~~~~~~~~~  140 (265)
                      ++.|++.+.|+.|++.|+++.++|+.....+..+.+..|+....          ..+++.. .++.-..-   .... . 
T Consensus       646 p~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~-~l~~l~~~---~l~~-~-  719 (1053)
T TIGR01523       646 PPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGS-QFDALSDE---EVDD-L-  719 (1053)
T ss_pred             CCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehH-HhhhcCHH---HHHH-H-
Confidence            77899999999999999999999999999999999999984310          0111110 00000000   0000 0 


Q ss_pred             CCCccc-cc-CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec--CCCchhhhhhcCCCeeeEE
Q 044617          141 SHHGCN-LC-PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR--KNYPLWDRICSNPMLIKAK  216 (265)
Q Consensus       141 kp~~~~-~~-~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  216 (265)
                       ...+. .+ .....|...++.+.++    .+.+.|+|||.||..|.   ..++++++-  .|....+   +   ..+..
T Consensus       720 -~~~~~V~ar~sP~~K~~iV~~lq~~----g~~Vam~GDGvNDapaL---k~AdVGIAmg~~gt~vak---~---aADiv  785 (1053)
T TIGR01523       720 -KALCLVIARCAPQTKVKMIEALHRR----KAFCAMTGDGVNDSPSL---KMANVGIAMGINGSDVAK---D---ASDIV  785 (1053)
T ss_pred             -hhcCeEEEecCHHHHHHHHHHHHhc----CCeeEEeCCCcchHHHH---HhCCccEecCCCccHHHH---H---hcCEE
Confidence             00000 00 0012377777777654    25688999999999888   456666653  2333222   1   22343


Q ss_pred             EEeCCCHHHHHHHHH
Q 044617          217 VHEWSSAEELKKILL  231 (265)
Q Consensus       217 ~~~~~~~~el~~~l~  231 (265)
                      +. -++|..|...+.
T Consensus       786 l~-dd~f~~I~~~i~  799 (1053)
T TIGR01523       786 LS-DDNFASILNAIE  799 (1053)
T ss_pred             Ee-cCCHHHHHHHHH
Confidence            32 256777766553

The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.

>COG3700 AphA Acid phosphatase (class B) [General function prediction only]

Probab=97.87  E-value=1.3e-05  Score=61.46  Aligned_cols=94  Identities=13%  Similarity=0.083  Sum_probs=57.4

Q ss_pred             ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH----HHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIET----IMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~----~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      .+-++++|.-.+++|-.++.+|++..-.++.    +.+.+.+......++..    |   +          .||.     
T Consensus       116 KevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~pv~f~G----d---k----------~k~~-----  173 (237)
T COG3700         116 KEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMNPVIFAG----D---K----------PKPG-----  173 (237)
T ss_pred             HHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCcceeecc----C---C----------CCcc-----
Confidence            4557778899999999999999876543333    22345554332222221    0   0          0111     


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                        ...|...    ++..    .--+++|||.+|+-+|+.+|..++-+.+.
T Consensus       174 --qy~Kt~~----i~~~----~~~IhYGDSD~Di~AAkeaG~RgIRilRA  213 (237)
T COG3700         174 --QYTKTQW----IQDK----NIRIHYGDSDNDITAAKEAGARGIRILRA  213 (237)
T ss_pred             --cccccHH----HHhc----CceEEecCCchhhhHHHhcCccceeEEec
Confidence              1123322    2222    23678899999999999999988877764

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.82  E-value=7.6e-05  Score=64.49  Aligned_cols=40  Identities=10%  Similarity=0.037  Sum_probs=31.5

Q ss_pred             CChhHHHHHHHHHHc----CCcEEEEeCCC---HH-HHHHHHHhcCcc
Q 044617           72 LDSHVAAAIKSAHSL----GCDLKIVSDAN---QF-YIETIMEHHGLL  111 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~----g~~~~ivS~~~---~~-~i~~~l~~~gl~  111 (265)
                      +.|++.++++.|+.+    |+++.++||..   .. .++.+.+.+|+.
T Consensus        17 ~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~   64 (321)
T TIGR01456        17 PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD   64 (321)
T ss_pred             ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence            489999999999998    99999999885   33 344444778864

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PLN02499 glycerol-3-phosphate acyltransferase

Probab=97.72  E-value=0.0015  Score=58.64  Aligned_cols=158  Identities=16%  Similarity=0.133  Sum_probs=88.5

Q ss_pred             ceEEEEecCCCCCCCCc-hHHHH----HHhCchHHHHHHHccC---------C-hhHHHHHHHHHHHhCCCCHHHHHHHh
Q 044617            3 DVVVVFDFDRTLIDDDS-DNWVV----TQMGLTHLFNQLRSTL---------P-WNSLMDRMMKELHSQGKTVEDIANCL   67 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~-~~~~~----~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (265)
                      ...++||+||||+.|.+ ..+.+    +..|..... .++...         . -....+. +....-.|...+++....
T Consensus         8 ~~~~~fD~DGTLlrs~ssFpyFmlva~eagG~~R~~-~LL~l~P~l~ll~~~~~~~~~lK~-mi~v~f~Gl~~~die~va   85 (498)
T PLN02499          8 SYSVVSELEGTLLKDADPFSYFMLVAFEASGLIRFA-LLLFLWPIIRLLDMLGMGDAALKL-MIFVATAGVHESEIESVA   85 (498)
T ss_pred             cceEEEecccceecCCCccHHHHHHHHHhccHHHHH-HHHHHhHHHHHHHhcCCchHHHHH-HHHHHhCCCCHHHHHHHH
Confidence            46899999999999544 22222    233333221 111110         1 1111111 333334566666664322


Q ss_pred             c----C---CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-cCcccccceEEecCceecCCCceEEeeccccc
Q 044617           68 R----Q---CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        68 ~----~---~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                      .    .   -.+.++   .++..++.| +.+++|..+..+++..+++ +|    ++.|++.+..+.+.|.+++.-..   
T Consensus        86 Ravlpkf~~~dv~~e---~~~~~~~~g-~~vVVTAsPrvmVEpFake~LG----~D~VvGTEL~v~~~G~~TG~~~G---  154 (498)
T PLN02499         86 RAVLPKFYMDDVDME---AWKVFSSCD-KRVVVTRMPRVMVERFAKEHLR----ADEVIGSELVVNRFGFATGFIRG---  154 (498)
T ss_pred             HHHhhHHHHhhCCHH---HHHHHHcCC-eEEEEeCCHHHHHHHHHHHhcC----CceEEeeeEEEeeccEEEEEEec---
Confidence            1    1   123344   455567777 9999999999999999998 88    45888888777755666642111   


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT  185 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a  185 (265)
                                .+ +.....+++.+.+| +....+=+||+..|-.-+
T Consensus       155 ----------~n-~~ek~~~rl~~~~g-~~~~~vg~~~~~~~~~f~  188 (498)
T PLN02499        155 ----------TD-VDQSVANRVANLFV-DERPQLGLGRISASSSFL  188 (498)
T ss_pred             ----------Cc-cHHHHHHHHHHHhC-ccCceecccCCcccchhh
Confidence                      01 11222445555555 223477788888777655

>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit

Probab=97.72  E-value=0.00036  Score=69.09  Aligned_cols=41  Identities=20%  Similarity=0.348  Sum_probs=38.7

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL  111 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~  111 (265)
                      ++.|++++.|+.+++.|+++.++|+.....+..+.+.+|+.
T Consensus       568 plr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~  608 (997)
T TIGR01106       568 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII  608 (997)
T ss_pred             CChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            67899999999999999999999999999999999999983

Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.

>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]

Probab=97.72  E-value=0.0005  Score=64.62  Aligned_cols=136  Identities=15%  Similarity=0.117  Sum_probs=85.3

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccce----EEecCceecC---------CCceEEeeccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE----IYTNPTYVDE---------QGRLRILPYHD  137 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~----i~~~~~~~d~---------~~~~~~~~~~~  137 (265)
                      ++.+++.+.++.+++.|+++..+|+.....+..+.++.|+...-+.    .++ ...+|+         -....++.-  
T Consensus       584 PPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~T-G~efD~ls~~~~~~~~~~~~vFaR--  660 (972)
T KOG0202|consen  584 PPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALT-GSEFDDLSDEELDDAVRRVLVFAR--  660 (972)
T ss_pred             CCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccc-hhhhhcCCHHHHHHHhhcceEEEe--
Confidence            6789999999999999999999999999999999999997544332    111 111221         000001000  


Q ss_pred             cccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEE
Q 044617          138 STLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKV  217 (265)
Q Consensus       138 ~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (265)
                        ..|         ..|..+++.+.+.-    +=+.|-|||.||-.+.|. ...++++...|....+..      .+.. 
T Consensus       661 --~~P---------~HK~kIVeaLq~~g----eivAMTGDGVNDApALK~-AdIGIAMG~~GTdVaKeA------sDMV-  717 (972)
T KOG0202|consen  661 --AEP---------QHKLKIVEALQSRG----EVVAMTGDGVNDAPALKK-ADIGIAMGISGTDVAKEA------SDMV-  717 (972)
T ss_pred             --cCc---------hhHHHHHHHHHhcC----CEEEecCCCccchhhhhh-cccceeecCCccHhhHhh------hhcE-
Confidence              001         22777777666542    457799999999988854 223344444455544422      2333 


Q ss_pred             EeCCCHHHHHHHHHH
Q 044617          218 HEWSSAEELKKILLH  232 (265)
Q Consensus       218 ~~~~~~~el~~~l~~  232 (265)
                      ..-+||+-|...+++
T Consensus       718 L~DDnFstIvaAVEE  732 (972)
T KOG0202|consen  718 LADDNFSTIVAAVEE  732 (972)
T ss_pred             EecCcHHHHHHHHHH
Confidence            334888887776654

>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]

Probab=97.71  E-value=0.00026  Score=69.35  Aligned_cols=105  Identities=16%  Similarity=0.172  Sum_probs=73.5

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccc--eEE-ecCce-ecC---------CCc-eEEeec
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFS--EIY-TNPTY-VDE---------QGR-LRILPY  135 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~--~i~-~~~~~-~d~---------~~~-~~~~~~  135 (265)
                      -++.+++++.++.|++.|+++..+|+.+...+..+.++.|+..--.  .++ +.+.. ..+         ... ..+.|.
T Consensus       546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~  625 (917)
T COG0474         546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAELDALSDEELAELVEELSVFARVSPE  625 (917)
T ss_pred             CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHH
Confidence            4789999999999999999999999999999999999999754422  122 22110 000         000 001122


Q ss_pred             cccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          136 HDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       136 ~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                                       .|..+++.+.+. |   +-+.|.|||.||..|.   +.++++++-+
T Consensus       626 -----------------qK~~IV~~lq~~-g---~vVamtGDGvNDapAL---k~ADVGIamg  664 (917)
T COG0474         626 -----------------QKARIVEALQKS-G---HVVAMTGDGVNDAPAL---KAADVGIAMG  664 (917)
T ss_pred             -----------------HHHHHHHHHHhC-C---CEEEEeCCCchhHHHH---HhcCccEEec
Confidence                             288888877776 3   5788999999999888   4566666544

>KOG3128 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.60  E-value=7.4e-05  Score=60.50  Aligned_cols=119  Identities=21%  Similarity=0.166  Sum_probs=80.1

Q ss_pred             CCCHHHHHHHhc--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEee
Q 044617           57 GKTVEDIANCLR--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILP  134 (265)
Q Consensus        57 ~~~~~~~~~~~~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~  134 (265)
                      +.+...+.+.+.  .+.+.+|..++++.|+++++++.|.|.+.-..++.++++......+..+.++-..++.+|.+..  
T Consensus       122 ~f~k~~I~~~Va~s~i~lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~g--  199 (298)
T KOG3128|consen  122 GFSKNAIDDIVAESNIALREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCG--  199 (298)
T ss_pred             CcCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhh--
Confidence            445666666554  4567899999999999999999999999999999998876554556667777666665554331  


Q ss_pred             ccccccCCCcccccCCCCch-HHHHHHHHHhcC--CCCceEEEEcCCCCCccccc
Q 044617          135 YHDSTLSHHGCNLCPSNLCK-GFVLDHVCTSFG--CGKQRFIYLGDGRGDFCPTL  186 (265)
Q Consensus       135 ~~~~~~kp~~~~~~~~~~~K-~~~i~~~~~~~g--i~~~~~v~vGD~~~Di~~a~  186 (265)
                          +.+|-...     .+| ...++...+.+.  -+..++++-||+..|+.||.
T Consensus       200 ----F~~~Liht-----fnkn~~v~~~~s~yf~~~~~~~nVillGdsigdl~ma~  245 (298)
T KOG3128|consen  200 ----FSQPLIHT-----FNKNSSVLQNESEYFHQLAGRVNVILLGDSIGDLHMAD  245 (298)
T ss_pred             ----hhHHHHHH-----HccchHHHHhhhHHHhhccCCceEEEeccccccchhhc
Confidence                11110000     012 233444344443  34578999999999999984

>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245

Probab=97.59  E-value=0.00038  Score=55.37  Aligned_cols=40  Identities=25%  Similarity=0.273  Sum_probs=36.3

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL  111 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~  111 (265)
                      ...|++.++|+.+.+ .+.++|-|++...++..++..+++.
T Consensus        45 ~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~~~l~~l~~~   84 (195)
T TIGR02245        45 LMRPYLHEFLTSAYE-DYDIVIWSATSMKWIEIKMTELGVL   84 (195)
T ss_pred             EeCCCHHHHHHHHHh-CCEEEEEecCCHHHHHHHHHHhccc
Confidence            458999999999999 5999999999999999999998763

This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.

>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins

Probab=97.56  E-value=0.00014  Score=57.94  Aligned_cols=32  Identities=16%  Similarity=0.249  Sum_probs=23.2

Q ss_pred             hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCH
Q 044617           67 LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQ   98 (265)
Q Consensus        67 ~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~   98 (265)
                      ....++.||+.++|+.|.+.|+.++++|++..
T Consensus        69 f~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~  100 (191)
T PF06941_consen   69 FSNLPPIPGAVEALKKLRDKGHEIVIITARPP  100 (191)
T ss_dssp             TTT--B-TTHHHHHHHHHTSTTEEEEEEE-SS
T ss_pred             hcCCCccHHHHHHHHHHHHcCCcEEEEEecCc
Confidence            34678899999999999999987877776643

5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....

>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.46  E-value=0.0004  Score=61.39  Aligned_cols=92  Identities=11%  Similarity=0.142  Sum_probs=66.7

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      ...+....++|..|+.+|.-++|+|-....-+..+.+.+.-     .++.-+. +.   ... ..+.             
T Consensus       254 G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~khp~-----MiLkeed-fa---~~~-iNW~-------------  310 (574)
T COG3882         254 GEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRKHPD-----MILKEED-FA---VFQ-INWD-------------  310 (574)
T ss_pred             chhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhhCCC-----eEeeHhh-hh---hhe-ecCC-------------
Confidence            35566778899999999999999998888888888776542     2332110 00   000 0122             


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                         +|.+-++.+++++++..+-.+|+.|++-..+-.++
T Consensus       311 ---~K~eNirkIAkklNlg~dSmvFiDD~p~ErE~vk~  345 (574)
T COG3882         311 ---PKAENIRKIAKKLNLGLDSMVFIDDNPAERELVKR  345 (574)
T ss_pred             ---cchhhHHHHHHHhCCCccceEEecCCHHHHHHHHh
Confidence               29999999999999999999999999877766654

>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=97.44  E-value=0.0081  Score=58.19  Aligned_cols=39  Identities=10%  Similarity=0.103  Sum_probs=31.3

Q ss_pred             CCCChhHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHhc
Q 044617           70 CPLDSHVAAAIKSAHSL-GCDLKIVSDANQFYIETIMEHH  108 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~-g~~~~ivS~~~~~~i~~~l~~~  108 (265)
                      ..+.|++.++|..|.+. +..++|+|+.....++..+...
T Consensus       531 a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~  570 (797)
T PLN03063        531 LGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY  570 (797)
T ss_pred             CCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC
Confidence            45678899999888775 5689999999988888887653

>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]

Probab=97.35  E-value=0.0028  Score=52.87  Aligned_cols=41  Identities=17%  Similarity=0.219  Sum_probs=33.6

Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                      |.+.+|+.++++++++......-+++.||-..|-.+-..+.
T Consensus       178 p~~~~KG~a~~~i~~~~~~~~~~~~~aGDD~TDE~~F~~v~  218 (266)
T COG1877         178 PPGVSKGAAIKYIMDELPFDGRFPIFAGDDLTDEDAFAAVN  218 (266)
T ss_pred             eCCcchHHHHHHHHhcCCCCCCcceecCCCCccHHHHHhhc
Confidence            67888999999999998766556999999999987765434

>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5

Probab=97.32  E-value=0.00046  Score=59.62  Aligned_cols=75  Identities=11%  Similarity=0.040  Sum_probs=50.3

Q ss_pred             CCchHHHHHHHHHhc--------CC-----CCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEE
Q 044617          151 NLCKGFVLDHVCTSF--------GC-----GKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAK  216 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~--------gi-----~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (265)
                      |...+.+++.+++.+        ++     ++++++||||+. +|+.+|+++|+.++.+..+.+...+..  ....++..
T Consensus       232 GKP~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~--~~~~p~~v  309 (321)
T TIGR01456       232 GKPTKLTYDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDL--KECKPTLI  309 (321)
T ss_pred             CCCChHHHHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCC--CCCCCCEE
Confidence            333678888877766        33     457999999997 999999998888777765434332211  11123445


Q ss_pred             EEeCCCHHHHHHHH
Q 044617          217 VHEWSSAEELKKIL  230 (265)
Q Consensus       217 ~~~~~~~~el~~~l  230 (265)
                      +   +++.|+...|
T Consensus       310 v---~~l~e~~~~i  320 (321)
T TIGR01456       310 V---NDVFDAVTKI  320 (321)
T ss_pred             E---CCHHHHHHHh
Confidence            5   8888887764

The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.

>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3

Probab=97.29  E-value=0.00065  Score=60.93  Aligned_cols=124  Identities=17%  Similarity=0.206  Sum_probs=68.7

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc---------CcccccceEEecC---ceecCCCceEEeeccccc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH---------GLLGCFSEIYTNP---TYVDEQGRLRILPYHDST  139 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~---------gl~~~f~~i~~~~---~~~d~~~~~~~~~~~~~~  139 (265)
                      ..|....+|+.|++.|.+++++||+.-.++..++..+         .+.++||.|+...   ..+.+ +.. ........
T Consensus       184 k~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~-~~p-fr~vd~~~  261 (448)
T PF05761_consen  184 KDPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYLLGPFLGEDPDWRDLFDVVIVDARKPGFFTE-GRP-FREVDTET  261 (448)
T ss_dssp             --CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHHCGCCSSTTT-GGGCECEEEES--CCHHHCT-----EEEEETTT
T ss_pred             CCchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhccCCCCCCCCChhhheeEEEEcCCCCcccCC-CCc-eEEEECCC
Confidence            3678999999999999999999999999999999864         4677899888642   11211 110 00000001


Q ss_pred             cCCCccc-ccCCC---CchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCC-CCCCeeeec
Q 044617          140 LSHHGCN-LCPSN---LCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKL-RDCDFVMPR  197 (265)
Q Consensus       140 ~kp~~~~-~~~~~---~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~-~~~~~~~~~  197 (265)
                      .+..+.. ..+..   +=...-+..+.+-+|....+++||||+. .|+..+++. |+.+.+++.
T Consensus       262 g~l~~~~~~~~l~~g~vY~gGn~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~  325 (448)
T PF05761_consen  262 GKLKWGKYVGPLEKGKVYSGGNWDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIP  325 (448)
T ss_dssp             SSEECS---SS--TC-EEEE--HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-T
T ss_pred             CccccccccccccCCCEeecCCHHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEeh
Confidence            1111100 00001   1123445666677777788999999995 999766554 666666663

1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....

>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3

Probab=97.23  E-value=0.00088  Score=55.19  Aligned_cols=45  Identities=22%  Similarity=0.344  Sum_probs=30.8

Q ss_pred             ccCCCCchHHHHHHHHHhcCCC---CceEEEEcCCCCCcccccCCCCC
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCG---KQRFIYLGDGRGDFCPTLKLRDC  191 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~---~~~~v~vGD~~~Di~~a~~~~~~  191 (265)
                      ..+.+.+|+.+++.++++++..   +.-++|+||..+|-.+-..+...
T Consensus       159 vrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~  206 (235)
T PF02358_consen  159 VRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALREL  206 (235)
T ss_dssp             EE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS
T ss_pred             EEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhc
Confidence            3477888999999999999765   66799999999999887665554

1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.

>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase

Probab=97.11  E-value=0.0024  Score=63.89  Aligned_cols=41  Identities=17%  Similarity=0.118  Sum_probs=38.2

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL  111 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~  111 (265)
                      ++.+|+.+.|+.|++.|+++.++|+.....+..+.+..|+-
T Consensus       631 ~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii  671 (1057)
T TIGR01652       631 KLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLL  671 (1057)
T ss_pred             hhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCC
Confidence            78899999999999999999999999999999999888874

This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.

>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC

Probab=97.09  E-value=0.0013  Score=60.31  Aligned_cols=86  Identities=19%  Similarity=0.310  Sum_probs=66.7

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      -++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+       ++.   ..        |..             
T Consensus       346 d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi-------~~~---~~--------p~~-------------  394 (499)
T TIGR01494       346 DPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI-------FAR---VT--------PEE-------------  394 (499)
T ss_pred             CCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------eec---cC--------HHH-------------
Confidence            37899999999999999999999999999999999999986       221   00        222             


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                          |...++.+.++ |   ..+.|+||+.||..+.+   .++++++-
T Consensus       395 ----K~~~v~~l~~~-g---~~v~~vGDg~nD~~al~---~Advgia~  431 (499)
T TIGR01494       395 ----KAALVEALQKK-G---RVVAMTGDGVNDAPALK---KADVGIAM  431 (499)
T ss_pred             ----HHHHHHHHHHC-C---CEEEEECCChhhHHHHH---hCCCcccc
Confidence                78888877543 2   67999999999998884   44444443

The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.

>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V)

Probab=97.06  E-value=0.0017  Score=64.77  Aligned_cols=42  Identities=14%  Similarity=0.263  Sum_probs=39.6

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL  111 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~  111 (265)
                      -++.|++.+.|+.|++.|+++.++|+.....+..+.+..|+-
T Consensus       655 d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii  696 (1054)
T TIGR01657       655 NPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIV  696 (1054)
T ss_pred             cCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence            378999999999999999999999999999999999999984

These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.

>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]

Probab=96.87  E-value=0.0031  Score=56.47  Aligned_cols=87  Identities=13%  Similarity=0.141  Sum_probs=65.4

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      .+.||++|.+.+||+.|++.+.+|+...-....+..+.|++++...  +               .      |        
T Consensus       447 ivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDdfiAe--a---------------t------P--------  495 (681)
T COG2216         447 IVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDDFIAE--A---------------T------P--------  495 (681)
T ss_pred             hcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchhhhhc--C---------------C------h--------
Confidence            4679999999999999999999999999999999999998755321  0               0      1        


Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                       ..|-..+++-..+    -.=+.|.||+-||-.+.   ..++++++
T Consensus       496 -EdK~~~I~~eQ~~----grlVAMtGDGTNDAPAL---AqAdVg~A  533 (681)
T COG2216         496 -EDKLALIRQEQAE----GRLVAMTGDGTNDAPAL---AQADVGVA  533 (681)
T ss_pred             -HHHHHHHHHHHhc----CcEEEEcCCCCCcchhh---hhcchhhh
Confidence             1255555544433    34577999999999877   55666665

>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]

Probab=96.82  E-value=0.0025  Score=54.98  Aligned_cols=83  Identities=16%  Similarity=0.166  Sum_probs=51.9

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHH------------HHHHHHHhcCcccccceEEecCceecCCCceEEeeccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQF------------YIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHD  137 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~------------~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~  137 (265)
                      ..+++.+..=|+.|.+.||.++|.||....            -++.++..+++.  |. ++++             .+..
T Consensus       103 ~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~anl~vP--i~-~~~A-------------~~~~  166 (422)
T KOG2134|consen  103 RILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIVANLGVP--IQ-LLAA-------------IIKG  166 (422)
T ss_pred             eeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHHHhcCCc--eE-Eeee-------------ccCC
Confidence            356788888999999999999999985322            244455555543  21 2221             1233


Q ss_pred             cccCCCcccccCCCCchHHHHHHHHHhcC----CCCceEEEEcCCC
Q 044617          138 STLSHHGCNLCPSNLCKGFVLDHVCTSFG----CGKQRFIYLGDGR  179 (265)
Q Consensus       138 ~~~kp~~~~~~~~~~~K~~~i~~~~~~~g----i~~~~~v~vGD~~  179 (265)
                      .++||           --.+.+.+.+.++    |....++++||..
T Consensus       167 ~yRKP-----------~tGMwe~~~~~~nd~~~Isek~s~fvgdaa  201 (422)
T KOG2134|consen  167 KYRKP-----------STGMWEFLKRLENDSVEISEKASIFVGDAA  201 (422)
T ss_pred             cccCc-----------chhHHHHHHHHhhccceeeechhhhhhhhc
Confidence            45566           3456666665554    5556677999964

>PLN03190 aminophospholipid translocase; Provisional

Probab=96.81  E-value=0.0081  Score=60.40  Aligned_cols=41  Identities=22%  Similarity=0.161  Sum_probs=36.7

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL  110 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl  110 (265)
                      -++.+|+.+.++.|++.|+++.++|+.....+..+....++
T Consensus       725 D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~L  765 (1178)
T PLN03190        725 DKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKL  765 (1178)
T ss_pred             cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCC
Confidence            37899999999999999999999999998888888776665

>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family

Probab=96.67  E-value=0.013  Score=49.66  Aligned_cols=50  Identities=8%  Similarity=0.097  Sum_probs=36.3

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHHhcCcccccceEEe
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDAN---QFYIETIMEHHGLLGCFSEIYT  119 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~---~~~i~~~l~~~gl~~~f~~i~~  119 (265)
                      ...+||+.++|++|+++|++++++||+.   .......++.+|+....+.+++
T Consensus        17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~t   69 (279)
T TIGR01452        17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFS   69 (279)
T ss_pred             CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEec
Confidence            4578999999999999999999999964   3333345677887533334443

This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.

>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]

Probab=96.54  E-value=0.032  Score=51.41  Aligned_cols=134  Identities=16%  Similarity=0.092  Sum_probs=73.3

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKS   82 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~   82 (265)
                      .++||.|+||||+.|+..-.++                             ...|           .-.-+.|+..+...
T Consensus       530 ~kIVISDIDGTITKSDvLGh~l-----------------------------p~iG-----------kDWTh~GVAkLyt~  569 (738)
T KOG2116|consen  530 DKIVISDIDGTITKSDVLGHVL-----------------------------PMIG-----------KDWTHTGVAKLYTK  569 (738)
T ss_pred             CcEEEecCCCceEhhhhhhhhh-----------------------------hhhc-----------CcchhhhHHHHHHH
Confidence            3789999999999996511111                             1111           22346799999999


Q ss_pred             HHHcCCcEEEEeCCC---HHHHHHHHHhcCcccc-c---ceEEecCceecCCCceEEeeccccccCCCcccccCCCCchH
Q 044617           83 AHSLGCDLKIVSDAN---QFYIETIMEHHGLLGC-F---SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKG  155 (265)
Q Consensus        83 l~~~g~~~~ivS~~~---~~~i~~~l~~~gl~~~-f---~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~  155 (265)
                      .+++||++..+|.+.   ....+..|+.+.=+.+ .   ..+++-      ++.+.-.--..+.++|+        .-|-
T Consensus       570 Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSP------d~lf~Al~REVI~RkPe--------~FKI  635 (738)
T KOG2116|consen  570 IKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSP------DSLFAALHREVIERKPE--------VFKI  635 (738)
T ss_pred             HHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCC------CcchHHHHHHHHHcCch--------hhhH
Confidence            999999999999863   2233333332211000 0   012221      11110000112233442        2255


Q ss_pred             HHHHHHHHhcCCCCceEE-EEcCCCCCcccccCCCC
Q 044617          156 FVLDHVCTSFGCGKQRFI-YLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       156 ~~i~~~~~~~gi~~~~~v-~vGD~~~Di~~a~~~~~  190 (265)
                      .-+..+.+-+.-.....+ .||...+|+..-+++|.
T Consensus       636 AcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgV  671 (738)
T KOG2116|consen  636 ACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGV  671 (738)
T ss_pred             HHHHHHHHhcCCCCCceeeecCCCcccceeeeeecC
Confidence            666666666652333333 68888999988766555

>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant

Probab=96.13  E-value=0.03  Score=55.18  Aligned_cols=77  Identities=16%  Similarity=0.250  Sum_probs=52.7

Q ss_pred             HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceE-EEEc
Q 044617           98 QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRF-IYLG  176 (265)
Q Consensus        98 ~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~-v~vG  176 (265)
                      ...++..|+..++.-.  .+++..     ...               .++.|...+|+.+++++..++|++.+++ |++|
T Consensus       923 v~elr~~Lr~~gLr~~--~iys~~-----~~~---------------LDVlP~~ASKgqAlRyL~~rwgi~l~~v~VfaG  980 (1050)
T TIGR02468       923 VKELRKLLRIQGLRCH--AVYCRN-----GTR---------------LNVIPLLASRSQALRYLFVRWGIELANMAVFVG  980 (1050)
T ss_pred             HHHHHHHHHhCCCceE--EEeecC-----CcE---------------eeeeeCCCCHHHHHHHHHHHcCCChHHeEEEec
Confidence            4567777888887632  556531     011               1234667889999999999999999999 5699


Q ss_pred             CCCC-CcccccCCCCCCeeeec
Q 044617          177 DGRG-DFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       177 D~~~-Di~~a~~~~~~~~~~~~  197 (265)
                      |+-| |++.+.. |..-.++.+
T Consensus       981 dSGntD~e~Ll~-G~~~tvi~~ 1001 (1050)
T TIGR02468       981 ESGDTDYEGLLG-GLHKTVILK 1001 (1050)
T ss_pred             cCCCCCHHHHhC-CceeEEEEe
Confidence            9999 9775544 443333333

Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.

>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=95.89  E-value=0.12  Score=39.00  Aligned_cols=44  Identities=14%  Similarity=0.209  Sum_probs=31.6

Q ss_pred             chHHHHHHHHHhcC-CCCceEEEEcCCC-CCcccccCCCCCCeeee
Q 044617          153 CKGFVLDHVCTSFG-CGKQRFIYLGDGR-GDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       153 ~K~~~i~~~~~~~g-i~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~  196 (265)
                      |..+.+.+...... ..+++++||||.. .|+-+|.++|.-+++.-
T Consensus       122 ct~E~~~y~~~Nshv~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~  167 (190)
T KOG2961|consen  122 CTAEEVEYHFGNSHVCTSSELIMVGDRLFTDIVYANRMGSLGVWTE  167 (190)
T ss_pred             ccHHHHHHHhCCcccCChhHeEEEccchhhhHhhhhhccceeEEec
Confidence            35667776665443 5689999999995 99999977665555443

>COG4502 5'(3')-deoxyribonucleotidase [Nucleotide transport and metabolism]

Probab=95.55  E-value=0.039  Score=40.97  Aligned_cols=53  Identities=15%  Similarity=0.206  Sum_probs=36.4

Q ss_pred             HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCC--HHHHH----HHHHhcCcccccceEEe
Q 044617           66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDAN--QFYIE----TIMEHHGLLGCFSEIYT  119 (265)
Q Consensus        66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~--~~~i~----~~l~~~gl~~~f~~i~~  119 (265)
                      +.++..+.|++.++++.|-+. +.++|+|...  ....+    =+.+.+.+-.+-..|+|
T Consensus        63 fFRnL~V~p~aq~v~keLt~~-y~vYivtaamdhp~s~~dK~eWl~E~FPFi~~qn~vfC  121 (180)
T COG4502          63 FFRNLGVQPFAQTVLKELTSI-YNVYIVTAAMDHPKSCEDKGEWLKEKFPFISYQNIVFC  121 (180)
T ss_pred             hhhhcCccccHHHHHHHHHhh-heEEEEEeccCCchhHHHHHHHHHHHCCCCChhhEEEe
Confidence            445778899999999999997 9999999872  22222    23345555555445555

>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]

Probab=95.14  E-value=0.15  Score=48.73  Aligned_cols=137  Identities=15%  Similarity=0.154  Sum_probs=82.9

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec-CceecC---CCceEEeecc--ccccCCC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN-PTYVDE---QGRLRILPYH--DSTLSHH  143 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~-~~~~d~---~~~~~~~~~~--~~~~kp~  143 (265)
                      -+..||+++.++.+++.|+.+-.||+..-..++.+..+.|+-..=....+. ...|.+   .....++|..  ...+.| 
T Consensus       646 DPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP-  724 (1034)
T KOG0204|consen  646 DPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRELSQEERDKIWPKLRVLARSSP-  724 (1034)
T ss_pred             CCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhhcCHHHHHhhhhhheeeecCCC-
Confidence            367999999999999999999999999999999999999874332211111 001110   0000011110  001122 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEE-EEcCCCCCcccccCCCCCCeeeecC--CCchhhhhhcCCCeeeEEEEeC
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFI-YLGDGRGDFCPTLKLRDCDFVMPRK--NYPLWDRICSNPMLIKAKVHEW  220 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v-~vGD~~~Di~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  220 (265)
                              .+|...++.+.+.     .+++ .-|||-||-.+.   ..++++++-+  |....+   +.   .|..+. -
T Consensus       725 --------~DK~lLVk~L~~~-----g~VVAVTGDGTNDaPAL---keADVGlAMGIaGTeVAK---Ea---SDIIi~-D  781 (1034)
T KOG0204|consen  725 --------NDKHLLVKGLIKQ-----GEVVAVTGDGTNDAPAL---KEADVGLAMGIAGTEVAK---EA---SDIIIL-D  781 (1034)
T ss_pred             --------chHHHHHHHHHhc-----CcEEEEecCCCCCchhh---hhcccchhccccchhhhh---hh---CCeEEE-c
Confidence                    3477777777643     3444 669999999888   4577777654  333322   22   244443 3


Q ss_pred             CCHHHHHHHH
Q 044617          221 SSAEELKKIL  230 (265)
Q Consensus       221 ~~~~el~~~l  230 (265)
                      +||.-|...+
T Consensus       782 DNFssIVk~v  791 (1034)
T KOG0204|consen  782 DNFSSIVKAV  791 (1034)
T ss_pred             CchHHHHHHH
Confidence            8888776654

>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional

Probab=95.02  E-value=0.068  Score=52.36  Aligned_cols=40  Identities=8%  Similarity=0.154  Sum_probs=33.1

Q ss_pred             CCCChhHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHhcC
Q 044617           70 CPLDSHVAAAIKSAHSL-GCDLKIVSDANQFYIETIMEHHG  109 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~-g~~~~ivS~~~~~~i~~~l~~~g  109 (265)
                      ..+.|++.++|+.|.+. +..++|+|+.....++..+...+
T Consensus       621 a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~  661 (934)
T PLN03064        621 LRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD  661 (934)
T ss_pred             cCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence            45778999999999875 56899999999999999886543

>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]

Probab=95.00  E-value=0.064  Score=42.31  Aligned_cols=14  Identities=36%  Similarity=0.563  Sum_probs=12.4

Q ss_pred             eEEEEecCCCCCCC
Q 044617            4 VVVVFDFDRTLIDD   17 (265)
Q Consensus         4 k~iifD~DGTL~ds   17 (265)
                      -++.||+||||+..
T Consensus        12 ~l~lfdvdgtLt~~   25 (252)
T KOG3189|consen   12 TLCLFDVDGTLTPP   25 (252)
T ss_pred             eEEEEecCCccccc
Confidence            47889999999877

>KOG2630 consensus Enolase-phosphatase E-1 [Amino acid transport and metabolism]

Probab=94.92  E-value=0.16  Score=41.12  Aligned_cols=99  Identities=13%  Similarity=0.078  Sum_probs=73.2

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcC---cccc----cceEEecCceecCCCceEEeeccccccCC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHG---LLGC----FSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~g---l~~~----f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                      ..+++++...++.-++.|++++|-|++.....+.+..+-+   +..+    ||.-++.                      
T Consensus       122 ~~v~aDv~~a~e~w~~~g~~vyIYSSgsv~AqKllfg~s~~gdl~~y~~gyfDt~iG~----------------------  179 (254)
T KOG2630|consen  122 AHVYADVLPAIERWSGEGVRVYIYSSGSVAAQKLLFGYSDAGDLRKYISGYFDTTIGL----------------------  179 (254)
T ss_pred             ccccchhHHHHHHHhhcCceEEEEcCCcHHHHHHHHcccCcchHHHHhhhhhhccccc----------------------
Confidence            4789999999999999999999999998877776654432   2222    2221110                      


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN  199 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~  199 (265)
                               ..-...+..+.+..|.++.++++.-|-..-..+|+.+|.......+.|
T Consensus       180 ---------K~e~~sy~~I~~~Ig~s~~eiLfLTd~~~Ea~aa~~aGl~a~l~~rPg  227 (254)
T KOG2630|consen  180 ---------KVESQSYKKIGHLIGKSPREILFLTDVPREAAAARKAGLQAGLVSRPG  227 (254)
T ss_pred             ---------eehhHHHHHHHHHhCCChhheEEeccChHHHHHHHhcccceeeeecCC
Confidence                     013577889999999999999999999999989977776655555554

>KOG2470 consensus Similar to IMP-GMP specific 5'-nucleotidase [Nucleotide transport and metabolism]

Probab=94.71  E-value=0.07  Score=45.73  Aligned_cols=104  Identities=12%  Similarity=0.140  Sum_probs=63.8

Q ss_pred             ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc---CcccccceEEecCceecCCCceEEeeccccccCCCcc-c--
Q 044617           73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH---GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC-N--  146 (265)
Q Consensus        73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~---gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~-~--  146 (265)
                      -|....+++.|+++|-+++++||++..++..-++.+   .+.+.||.|+..      .+++++   ....++|+.+ +  
T Consensus       242 ~~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flvG~~WRdlFDVVIvq------A~KP~F---ftde~rPfR~~dek  312 (510)
T KOG2470|consen  242 NPQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLVGDDWRDLFDVVIVQ------ANKPEF---FTDERRPFRKYDEK  312 (510)
T ss_pred             cHHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeeeCccHHhhhheeEEe------cCCCcc---cccccCcchhhccc
Confidence            457788999999999999999999999988877654   455678776642      111110   0111122221 1  


Q ss_pred             -------cc-CCCCc---hHHHHHHHHHhcCCCCceEEEEcCCC-CCcccc
Q 044617          147 -------LC-PSNLC---KGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPT  185 (265)
Q Consensus       147 -------~~-~~~~~---K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a  185 (265)
                             .+ ....+   +..-+..+++--|....+++|+||.. +|+.-.
T Consensus       313 ~~sl~wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~  363 (510)
T KOG2470|consen  313 RGSLLWDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADL  363 (510)
T ss_pred             ccchhhhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhh
Confidence                   00 00111   22345566666666667999999996 888443

>KOG1618 consensus Predicted phosphatase [General function prediction only]

Probab=94.69  E-value=0.11  Score=43.97  Aligned_cols=41  Identities=5%  Similarity=-0.001  Sum_probs=29.7

Q ss_pred             CCChhHHHHHHHHHHc----CCcEEEEeCCCHH----HHHHHHHhcCcc
Q 044617           71 PLDSHVAAAIKSAHSL----GCDLKIVSDANQF----YIETIMEHHGLL  111 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~----g~~~~ivS~~~~~----~i~~~l~~~gl~  111 (265)
                      ...+++.+.++.|..+    .++++++||+.-.    -++.+-+.+|++
T Consensus        51 ~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~   99 (389)
T KOG1618|consen   51 RPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVE   99 (389)
T ss_pred             CCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCc
Confidence            5578999999999887    7999999997432    344444556653

>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]

Probab=94.50  E-value=0.012  Score=48.96  Aligned_cols=40  Identities=10%  Similarity=0.220  Sum_probs=34.9

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL  110 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl  110 (265)
                      +.-+|++.++|....+. +.+++.|++...+...++..++-
T Consensus       130 V~kRP~vdeFL~~~s~~-~e~v~FTAs~~~Ya~~v~D~LD~  169 (262)
T KOG1605|consen  130 VRKRPHVDEFLSRVSKW-YELVLFTASLEVYADPLLDILDP  169 (262)
T ss_pred             EEcCCCHHHHHHHhHHH-HHHHHHHhhhHHHHHHHHHHccC
Confidence            34589999999999886 89999999999999999988764

>KOG0206 consensus P-type ATPase [General function prediction only]

Probab=94.25  E-value=0.19  Score=50.15  Aligned_cols=40  Identities=18%  Similarity=0.118  Sum_probs=34.7

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL  110 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl  110 (265)
                      ++.+|+.+.|+.|++.|+++-++|+...+.+-.+.-..++
T Consensus       651 kLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~L  690 (1151)
T KOG0206|consen  651 KLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRL  690 (1151)
T ss_pred             hhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcC
Confidence            6788999999999999999999999988887777665544

>COG4850 Uncharacterized conserved protein [Function unknown]

Probab=93.98  E-value=0.61  Score=39.76  Aligned_cols=95  Identities=17%  Similarity=0.163  Sum_probs=55.6

Q ss_pred             CCCCChhHHHHHHHHHHcC-CcEEEEeCCCHHHHHH---HHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           69 QCPLDSHVAAAIKSAHSLG-CDLKIVSDANQFYIET---IMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g-~~~~ivS~~~~~~i~~---~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      .-.++||+..+++.|.+.| .+++.+||++-..-..   .+...++.. -..++-+   .  .+.+..         +  
T Consensus       194 tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~-GPl~L~~---~--g~~~~~---------i--  256 (373)
T COG4850         194 TRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPY-GPLLLRR---W--GGVLDN---------I--  256 (373)
T ss_pred             ccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCC-CchhHhh---c--CCcccc---------c--
Confidence            4578999999999999988 8999999997554333   222222210 0001100   0  000000         0  


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCccc
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCP  184 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~  184 (265)
                        +-+....|...+..++.++  +-.+.+.|||+ +-|.+.
T Consensus       257 --~~sga~rK~~~l~nil~~~--p~~kfvLVGDsGE~DpeI  293 (373)
T COG4850         257 --IESGAARKGQSLRNILRRY--PDRKFVLVGDSGEHDPEI  293 (373)
T ss_pred             --ccchhhhcccHHHHHHHhC--CCceEEEecCCCCcCHHH
Confidence              0012233778888888887  34689999998 678754

>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]

Probab=93.73  E-value=0.36  Score=43.02  Aligned_cols=100  Identities=16%  Similarity=0.143  Sum_probs=72.7

Q ss_pred             CCCCCh--hHHHHHHHHHHcCCcEEEEeCC--CHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           69 QCPLDS--HVAAAIKSAHSLGCDLKIVSDA--NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        69 ~~~~~~--g~~e~l~~l~~~g~~~~ivS~~--~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      ...++|  ...++.+.+.+.|.+++++|.-  +...++.++...|.+-.--.++.+       +...       ..|   
T Consensus        95 KevLypn~~~~eL~e~ai~n~krVIlISDMYlps~Il~~~L~s~g~d~~nipiY~S-------~e~r-------l~K---  157 (635)
T COG5610          95 KEVLYPNKKNIELVEEAIKNEKRVILISDMYLPSSILRTFLNSFGPDFNNIPIYMS-------SEFR-------LKK---  157 (635)
T ss_pred             eeEeeccccchHHHHHHHhCCCeEEEEecccCcHHHHHHHHHhcCCCccCceeeec-------ceee-------hhc---
Confidence            334555  5668999999999999999986  455688888888875332224442       1110       111   


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCe
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDF  193 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~  193 (265)
                              ..+..+..+++..++++...+.+||.. .|..+++++|.++.
T Consensus       158 --------nSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tl  199 (635)
T COG5610         158 --------NSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTL  199 (635)
T ss_pred             --------ccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHH
Confidence                    256789999999999999999999995 89999988887653

>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=93.73  E-value=0.27  Score=46.10  Aligned_cols=96  Identities=13%  Similarity=0.098  Sum_probs=60.7

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh--cCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH--HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~--~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      .-..++..-|..|+.++.-..++++......-...+.  ..+......+++++..          |.             
T Consensus       711 ~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRct----------Pt-------------  767 (1051)
T KOG0210|consen  711 TSRGDAHNELNNLRRKTDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCT----------PT-------------  767 (1051)
T ss_pred             CCchHHHHHHHHhhcCCCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecC----------hh-------------
Confidence            4456888889999998766667777665544443332  1211122345554210          22             


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                          .|++++..+.++-|   .++-+||||-||+.|-.. ..+++++.+
T Consensus       768 ----QKA~v~~llq~~t~---krvc~IGDGGNDVsMIq~-A~~GiGI~g  808 (1051)
T KOG0210|consen  768 ----QKAQVVRLLQKKTG---KRVCAIGDGGNDVSMIQA-ADVGIGIVG  808 (1051)
T ss_pred             ----HHHHHHHHHHHhhC---ceEEEEcCCCccchheee-cccceeeec
Confidence                28888888887765   689999999999998854 334555543

>TIGR01658 EYA-cons_domain eyes absent protein conserved domain

Probab=91.40  E-value=0.39  Score=39.35  Aligned_cols=39  Identities=23%  Similarity=0.352  Sum_probs=33.0

Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                      ..+|..-++++.+++|-+.-..++||||..--.+|+.++
T Consensus       212 kvGK~~cFe~I~~Rfg~p~~~f~~IGDG~eEe~aAk~l~  250 (274)
T TIGR01658       212 KVGKLQCFKWIKERFGHPKVRFCAIGDGWEECTAAQAMN  250 (274)
T ss_pred             hcchHHHHHHHHHHhCCCCceEEEeCCChhHHHHHHhcC
Confidence            356999999999999987788999999998888885533

This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.

>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]

Probab=91.06  E-value=0.3  Score=43.23  Aligned_cols=17  Identities=35%  Similarity=0.526  Sum_probs=15.2

Q ss_pred             ceEEEEecCCCCCCCCc
Q 044617            3 DVVVVFDFDRTLIDDDS   19 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~   19 (265)
                      .++|++|+||||+.++.
T Consensus       375 ~kiVVsDiDGTITkSD~  391 (580)
T COG5083         375 KKIVVSDIDGTITKSDA  391 (580)
T ss_pred             CcEEEEecCCcEEehhh
Confidence            57899999999999965

>COG5663 Uncharacterized conserved protein [Function unknown]

Probab=88.11  E-value=0.94  Score=34.89  Aligned_cols=34  Identities=12%  Similarity=0.025  Sum_probs=24.8

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHH
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETI  104 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~  104 (265)
                      ..+..++...|..++++ .+++.+|+......+.-
T Consensus        71 ~l~~q~v~~~L~~~~e~-~~L~~itar~~dl~~iT  104 (194)
T COG5663          71 ALLAQLVKQVLPSLKEE-HRLIYITARKADLTRIT  104 (194)
T ss_pred             HHHHHHHHHHhHHHHhh-ceeeeeehhhHHHHHHH
Confidence            44567888899998886 68888888766654443

>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]

Probab=87.31  E-value=2.6  Score=40.70  Aligned_cols=43  Identities=16%  Similarity=0.375  Sum_probs=38.7

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL  111 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~  111 (265)
                      ..++.+++++.|+.|++.+++++.+|+...-.+-.+.+++|+-
T Consensus       673 ~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv  715 (1160)
T KOG0209|consen  673 SCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIV  715 (1160)
T ss_pred             eCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeee
Confidence            5688999999999999999999999999888888888888874

>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]

Probab=84.16  E-value=2.2  Score=41.14  Aligned_cols=40  Identities=20%  Similarity=0.343  Sum_probs=35.6

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL  110 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl  110 (265)
                      ++...+.+.+..+++.|++++.||+.+....+.+.+..|+
T Consensus       590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgI  629 (1019)
T KOG0203|consen  590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGI  629 (1019)
T ss_pred             CCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheee
Confidence            4567888999999999999999999999999998888885

>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway

Probab=83.05  E-value=3.6  Score=36.10  Aligned_cols=34  Identities=26%  Similarity=0.167  Sum_probs=21.1

Q ss_pred             ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH
Q 044617           73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIETIME  106 (265)
Q Consensus        73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~  106 (265)
                      ...+...|-.|-++|+.++|||..-........+
T Consensus       168 d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~kY~~  201 (408)
T PF06437_consen  168 DNPVIPRIIKLLRRGVKVGIVTAAGYPGAEKYEE  201 (408)
T ss_pred             CchHHHHHHHHHhcCCeEEEEeCCCCCChHHHHH
Confidence            3445555555566699999999865544444333

; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process

>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]

Probab=80.58  E-value=8.4  Score=28.32  Aligned_cols=92  Identities=8%  Similarity=-0.002  Sum_probs=59.8

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCC-HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDAN-QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~-~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...+|++++..|..|+++|+.++++|++. ..++...|+.+.+...  .+.....  .  +.    ++.      .    
T Consensus        42 e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~q~L~~fkvk~~--Gvlkps~--e--~f----t~~------~----  101 (144)
T KOG4549|consen   42 EMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIASQGLETFKVKQT--GVLKPSL--E--EF----TFE------A----  101 (144)
T ss_pred             eeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhccCcc--cccchhh--h--cC----cee------e----
Confidence            56789999999999999999999999875 5567778887766433  2221100  0  00    000      0    


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCC
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGD  181 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~D  181 (265)
                       --..+|-..+..+-...++...+..++.|-...
T Consensus       102 -~g~gsklghfke~~n~s~~~~k~~~~fdDesrn  134 (144)
T KOG4549|consen  102 -VGDGSKLGHFKEFTNNSNSIEKNKQVFDDESRN  134 (144)
T ss_pred             -ecCcccchhHHHHhhccCcchhceeeecccccC
Confidence             001236666777777777777788888876543

>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3

Probab=80.08  E-value=3  Score=34.64  Aligned_cols=74  Identities=16%  Similarity=0.198  Sum_probs=43.4

Q ss_pred             hhHHHHHHHHHHc------CCcEEEEeCCCHHHHHHH---HHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           74 SHVAAAIKSAHSL------GCDLKIVSDANQFYIETI---MEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        74 ~g~~e~l~~l~~~------g~~~~ivS~~~~~~i~~~---l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      ......|.+++++      -++++|||.+....-+++   |+..|+.  +|..+..                        
T Consensus       167 ~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~RvI~TLr~Wgv~--vDEafFL------------------------  220 (264)
T PF06189_consen  167 KDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHERVIRTLRSWGVR--VDEAFFL------------------------  220 (264)
T ss_pred             HHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHHHHHHHHHcCCc--HhHHHHh------------------------
Confidence            3444455555544      378999998765544444   4555654  3332221                        


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCccccc
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTL  186 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~  186 (265)
                           .|..|..+++.+.        .=+++.|...-++.|.
T Consensus       221 -----gG~~K~~vL~~~~--------phIFFDDQ~~H~~~a~  249 (264)
T PF06189_consen  221 -----GGLPKGPVLKAFR--------PHIFFDDQDGHLESAS  249 (264)
T ss_pred             -----CCCchhHHHHhhC--------CCEeecCchhhhhHhh
Confidence                 1344776666543        3578899988887773

1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	265
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	5e-29
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	2e-05
3fvv_A	232	Uncharacterized protein; unknown function, structu	4e-05
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	4e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-05
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	1e-04
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	1e-04
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	3e-04
2g09_A	297	Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMP	4e-04
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	4e-04

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236

 Score =  109 bits (273), Expect = 5e-29
 Identities = 38/251 (15%), Positives = 75/251 (29%), Gaps = 30/251 (11%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMG------LTHLFNQLRSTLPWNSLMDRMMKELHSQGK 58
            ++ DFD T+  +D+   ++          L      L  TL     + RM   L S  K
Sbjct: 8   FIICDFDGTITMNDNIINIMKTFAPPEWMALKDGV--LSKTLSIKEGVGRMFGLLPSSLK 65

Query: 59  TVEDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIY 118
             E  +  L    +       +   +       ++S    F++  ++E    +     IY
Sbjct: 66  E-EITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEG---IVEKDRIY 121

Query: 119 TNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG 178
            N    D        P+       + C  C  ++       +         Q  I +GD 
Sbjct: 122 CNHASFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPN---------QYIIMIGDS 172

Query: 179 RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAIS 238
             D       +  D    R    L +               +    E++K + ++     
Sbjct: 173 VTDVEA---AKLSDLCFARD--YLLNECREQ----NLNHLPYQDFYEIRKEIENVKEVQE 223

Query: 239 IKEDVDSTVSS 249
             ++ ++  SS
Sbjct: 224 WLQNKNAGESS 234

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} Length = 240

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 30/190 (15%), Positives = 60/190 (31%), Gaps = 45/190 (23%)

Query: 5   VVVFDFDRTLID---D--DSDNWVVTQMGLTHLFNQLRSTLPW--NSLMDRMMKELHSQG 57
           +V+FD D TL D       S  + +   G+      L     +    L D   +    + 
Sbjct: 31  IVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQ---FIGPPLHDTFKEYYKFED 87

Query: 58  KTVEDI---------ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH 108
           K  ++             + +  +  ++   ++  +  G  L + +     + ETI+ + 
Sbjct: 88  KKAKEAVEKYREYFADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYF 147

Query: 109 GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCG 168
            +   F  I                          G NL  + + K  V+ +V       
Sbjct: 148 DIDRYFKYIA-------------------------GSNLDGTRVNKNEVIQYVLDLCNVK 182

Query: 169 -KQRFIYLGD 177
            K + I +GD
Sbjct: 183 DKDKVIMVGD 192

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} Length = 232

 Score = 42.7 bits (101), Expect = 4e-05
 Identities = 20/130 (15%), Positives = 38/130 (29%), Gaps = 26/130 (20%)

Query: 4   VVVVFDFDRTLIDDDSD----------NWVVTQMGLTHLFNQL-----RSTLPWNSLMDR 48
            + +FD D TL+  DSD                       + L     R  L      + 
Sbjct: 5   RLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEF 64

Query: 49  MMKELHSQGKTVEDIANCLRQCPLDSHVA--------AAIKSAHSLGCDLKIVSDANQFY 100
           M+  L     +  ++A    +  +   +           ++   + G    +V+  N F 
Sbjct: 65  MLGLL--AAHSPVELAAWHEEF-MRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFV 121

Query: 101 IETIMEHHGL 110
              I    G+
Sbjct: 122 TAPIARAFGV 131

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} Length = 226

 Score = 42.6 bits (101), Expect = 4e-05
 Identities = 32/194 (16%), Positives = 57/194 (29%), Gaps = 45/194 (23%)

Query: 5   VVVFDFDRTLID---D--DSDNWVVTQMGL-THLFNQLRSTLPW--NSLMDRMMKELHSQ 56
            V+FD D TL D       S  + + +  +     + L     +    L    M+  +  
Sbjct: 6   YVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNK---FVGPPLKTSFMEYYNFD 62

Query: 57  GKTVEDI---------ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH 107
            +T             A  + +  +   + A + S    G  L + +     + + I+EH
Sbjct: 63  EETATVAIDYYRDYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEH 122

Query: 108 HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGC 167
             L   F  I  +       G+L                       K  V+ +   S   
Sbjct: 123 FKLAFYFDAIVGS----SLDGKLS--T-------------------KEDVIRYAMESLNI 157

Query: 168 GKQRFIYLGDGRGD 181
                I +GD   D
Sbjct: 158 KSDDAIMIGDREYD 171

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 8e-05
 Identities = 46/304 (15%), Positives = 93/304 (30%), Gaps = 104/304 (34%)

Query: 6   VVFDFDRTLIDDDSDNWVVTQM--------GLTHLFNQLRSTLPWNSLMDRMMKELH-SQ 56
           +V  F   ++  +   ++++ +         +T ++ + R  L +N   +++  + + S+
Sbjct: 78  MVQKFVEEVLRINYK-FLMSPIKTEQRQPSMMTRMYIEQRDRL-YND--NQVFAKYNVSR 133

Query: 57  GKTVEDIANCLRQCPLDSH---------------VAAAIKSAHSLGC--DLKI--VSDAN 97
            +    +   L +  L                  VA  +  ++ + C  D KI  ++  N
Sbjct: 134 LQPYLKLRQALLE--LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKN 191

Query: 98  QFYIETIMEHHGLLGCF---------SEIYTNPTY--VDEQGRLRIL----PYHDSTLSH 142
               ET++E    L  +         S+  +N        Q  LR L    PY +  L  
Sbjct: 192 CNSPETVLEMLQKL-LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL-- 248

Query: 143 HGCNLCPSNLCKGFVLDHVCTS-----FGCGKQRFIYLGDGRGDF-CPTLKL-RD---CD 192
                         VL +V  +     F               +  C  L   R     D
Sbjct: 249 --------------VLLNVQNAKAWNAF---------------NLSCKILLTTRFKQVTD 279

Query: 193 FVMP--RKNYPLWDRIC------SNPMLIK-AKVHEWSSAEELKKI---LLHLIGAISIK 240
           F+      +  L              +L+K           E+       L +I   SI+
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE-SIR 338

Query: 241 EDVD 244
           + + 
Sbjct: 339 DGLA 342

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} Length = 200

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 14/129 (10%), Positives = 34/129 (26%), Gaps = 17/129 (13%)

Query: 6   VVFDFDRTLIDDDSDNWVVTQM----GLTHLFNQLRSTLPWNSLMDR----------MMK 51
           + +D    L+ +  D      +    GL    +           ++            + 
Sbjct: 7   LFWDIGGVLLTNGWDREQRADVAQRFGL-DTDDFTERHRLAAPELELGRMTLAEYLEQVV 65

Query: 52  ELHSQGKTVEDIANCLRQCP-LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGL 110
               +  T ED    + +       V A  +        +  +++  +   E  +   GL
Sbjct: 66  FYQPRDFTPEDFRAVMEEQSQPRPEVLALARDLGQ-RYRMYSLNNEGRDLNEYRIRTFGL 124

Query: 111 LGCFSEIYT 119
                  +T
Sbjct: 125 GEFLLAFFT 133

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 210

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 25/186 (13%), Positives = 56/186 (30%), Gaps = 42/186 (22%)

Query: 5   VVVFDFDRTLID---D--DSDNWVVTQMGL-THLFNQLRST--LPWNSLMDRMMKELHSQ 56
            + FD D TL+D      ++  +   ++G+ +     +R     P  S     + +    
Sbjct: 6   AIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATCLSKDQIS 65

Query: 57  GKTVED-----IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL 111
            + V+       A  + +  L   +   ++   S    L I +  +    + + ++  + 
Sbjct: 66  -EAVQIYRSYYKAKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIH 123

Query: 112 GCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQR 171
             F  IY                       H           K  V+     +     ++
Sbjct: 124 HFFDGIYG----------------SSPEAPH-----------KADVIHQALQTHQLAPEQ 156

Query: 172 FIYLGD 177
            I +GD
Sbjct: 157 AIIIGD 162

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 Length = 206

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 17/130 (13%), Positives = 40/130 (30%), Gaps = 17/130 (13%)

Query: 6   VVFDFDRTLIDDDSDNWVVTQMGLTHL----FNQLRSTLPWNSLMDR----------MMK 51
            +FD    ++D D +  +     LT +      +           +R           + 
Sbjct: 10  YIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALC 69

Query: 52  ELHSQGKTVEDIANCLRQ--CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH- 108
              +   + E  ++  +     L   V A +      G  + ++S+ N+ +     E + 
Sbjct: 70  HEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYP 129

Query: 109 GLLGCFSEIY 118
            +      IY
Sbjct: 130 EIRDAADHIY 139

>2g09_A Cytosolic 5'-nucleotidase III; uniprot Q9D020, UMPH-1, pyrim nucleotidase 1, P5N-1, NT5C3 protein, AAH38029, BC038029, M LEAD poisoning; HET: PIN; 2.10A {Mus musculus} PDB: 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A Length = 297

 Score = 40.4 bits (94), Expect = 4e-04
 Identities = 33/221 (14%), Positives = 58/221 (26%), Gaps = 39/221 (17%)

Query: 6   VVFDFDRTLIDDDSDNWVV----------------TQMGLTHLFNQLR-----STLPWN- 43
           ++ DFD TL     +                     +  L  L  Q         L    
Sbjct: 46  IITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTVEE 105

Query: 44  --SLMDRMMKELHS----QGKTVEDIANCLRQCP--LDSHVAAAIKSAHSLGCDLKIVSD 95
               M     + H     QG     +   +      L              G  + I S 
Sbjct: 106 KFPYMVEWYTKSHGLLIEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSA 165

Query: 96  ANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKG 155
                +E ++   G+     ++ +N    DE G L+   +    +  H  N     L   
Sbjct: 166 GIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKG--FKGELI--HVFNKHDGALKNT 221

Query: 156 FVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP 196
                +           I LGD +GD      + + + ++ 
Sbjct: 222 DYFSQL-----KDNSNIILLGDSQGDLRMADGVANVEHILK 257

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 Length = 207

 Score = 39.5 bits (93), Expect = 4e-04
 Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 14/127 (11%)

Query: 6   VVFDFDRTLID---D--DSDNWVVTQMGLTHLFNQLRST---LPWNSLMDRMMKELHSQG 57
            ++D D TL+D              Q  + +   ++R          L+ R+ ++ +   
Sbjct: 7   FIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAEDRNLDV 66

Query: 58  KTVEDI-----ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG 112
           + +  +     A    Q  L       +  A   G    I +         I++  G+  
Sbjct: 67  EVLNQVRAQSLAEKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVES 125

Query: 113 CFSEIYT 119
            F+EI T
Sbjct: 126 YFTEILT 132

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	265
3kbb_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.94
3dv9_A	247	Beta-phosphoglucomutase; structural genomics, APC6	99.92
3qxg_A	243	Inorganic pyrophosphatase; hydrolase, magnesium bi	99.92
3mc1_A	226	Predicted phosphatase, HAD family; PSI2, NYSGXRC,	99.92
2ah5_A	210	COG0546: predicted phosphatases; MCSG, structural	99.91
2hi0_A	240	Putative phosphoglycolate phosphatase; YP_619066.1	99.91
4ex6_A	237	ALNB; modified rossman fold, phosphatase, magnesiu	99.91
4eek_A	259	Beta-phosphoglucomutase-related protein; hydrolase	99.9
2pib_A	216	Phosphorylated carbohydrates phosphatase TM_1254;	99.9
2nyv_A	222	Pgpase, PGP, phosphoglycolate phosphatase; structu	99.9
3kzx_A	231	HAD-superfamily hydrolase, subfamily IA, variant;	99.9
4g9b_A	243	Beta-PGM, beta-phosphoglucomutase; HAD, putative p	99.9
3m9l_A	205	Hydrolase, haloacid dehalogenase-like family; HAD	99.9
3iru_A	277	Phoshonoacetaldehyde hydrolase like protein; phosp	99.9
3s6j_A	233	Hydrolase, haloacid dehalogenase-like family; stru	99.9
3um9_A	230	Haloacid dehalogenase, type II; haloacid dehalogen	99.9
2no4_A	240	(S)-2-haloacid dehalogenase IVA; HAD superfamily,	99.89
3umb_A	233	Dehalogenase-like hydrolase; 2.20A {Ralstonia sola	99.89
2hoq_A	241	Putative HAD-hydrolase PH1655; haloacid dehalogena	99.89
4gib_A	250	Beta-phosphoglucomutase; rossmann fold, HAD-like,	99.89
3e58_A	214	Putative beta-phosphoglucomutase; structu genomics	99.89
2om6_A	235	Probable phosphoserine phosphatase; rossmann fold,	99.89
3sd7_A	240	Putative phosphatase; structural genomics, haloaci	99.89
3qnm_A	240	Haloacid dehalogenase-like hydrolase; structural g	99.89
2hcf_A	234	Hydrolase, haloacid dehalogenase-like family; NP_6	99.89
3u26_A	234	PF00702 domain protein; structural genomics, PSI-b	99.89
3m1y_A	217	Phosphoserine phosphatase (SERB); NYSGXRC, PSI II,	99.88
3ed5_A	238	YFNB; APC60080, bacillus subtilis subsp. subtilis	99.88
3nuq_A	282	Protein SSM1, putative nucleotide phosphatase; sup	99.88
1nnl_A	225	L-3-phosphoserine phosphatase; PSP, HPSP, phospho-	99.88
2hsz_A	243	Novel predicted phosphatase; structural genomics,	99.88
2gfh_A	260	Haloacid dehalogenase-like hydrolase domain conta;	99.88
1zrn_A	232	L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud	99.88
3ib6_A	189	Uncharacterized protein; structural genomics, unkn	99.88
3smv_A	240	S-(-)-azetidine-2-carboxylate hydrolase; haloacid	99.87
2w43_A	201	Hypothetical 2-haloalkanoic acid dehalogenase; hyd	99.87
3l5k_A	250	Protein GS1, haloacid dehalogenase-like hydrolase	99.87
3cnh_A	200	Hydrolase family protein; NP_295428.1, predicted h	99.87
2hdo_A	209	Phosphoglycolate phosphatase; NP_784602.1, structu	99.87
1swv_A	267	Phosphonoacetaldehyde hydrolase; HAD enzyme superf	99.86
3d6j_A	225	Putative haloacid dehalogenase-like hydrolase; str	99.86
2zg6_A	220	Putative uncharacterized protein ST2620, probable	99.86
3umg_A	254	Haloacid dehalogenase; defluorinase, hydrolase; 2.	99.86
1te2_A	226	Putative phosphatase; structural genomics, phospha	99.86
4eze_A	317	Haloacid dehalogenase-like hydrolase; magnesium bi	99.86
3ddh_A	234	Putative haloacid dehalogenase-like family hydrol;	99.86
2go7_A	207	Hydrolase, haloacid dehalogenase-like family; stru	99.86
3k1z_A	263	Haloacid dehalogenase-like hydrolase domain-conta	99.86
1qq5_A	253	Protein (L-2-haloacid dehalogenase); hydrolase; 1.	99.86
3l8h_A	179	Putative haloacid dehalogenase-like hydrolase; HAD	99.86
3umc_A	254	Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru	99.85
2pke_A	251	Haloacid delahogenase-like family hydrolase; NP_63	99.85
1rku_A	206	Homoserine kinase; phosphoserine phosphatase, phos	99.85
2i6x_A	211	Hydrolase, haloacid dehalogenase-like family; HAD	99.85
1yns_A	261	E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo	99.85
3kd3_A	219	Phosphoserine phosphohydrolase-like protein; csgid	99.85
4dcc_A	229	Putative haloacid dehalogenase-like hydrolase; mag	99.84
3fvv_A	232	Uncharacterized protein; unknown function, structu	99.84
1l7m_A	211	Phosphoserine phosphatase; rossmann fold, four-hel	99.84
3nas_A	233	Beta-PGM, beta-phosphoglucomutase; PSI, structural	99.84
3vay_A	230	HAD-superfamily hydrolase; rossmann fold, haloacid	99.84
2fdr_A	229	Conserved hypothetical protein; SAD, structural ge	99.84
3p96_A	415	Phosphoserine phosphatase SERB; ssgcid, structural	99.83
2fea_A	236	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.83
2fi1_A	190	Hydrolase, haloacid dehalogenase-like family; stru	99.83
2b0c_A	206	Putative phosphatase; alpha-D-glucose-1-phosphate,	99.83
2oda_A	196	Hypothetical protein pspto_2114; haloacid dehaloge	99.82
2gmw_A	211	D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi	99.82
2wf7_A	221	Beta-PGM, beta-phosphoglucomutase; transition stat	99.82
4ap9_A	201	Phosphoserine phosphatase; hydrolase, haloacid deh	99.82
2p11_A	231	Hypothetical protein; putative haloacid dehalogena	99.81
2g80_A	253	Protein UTR4; YEL038W, UTR4 protein (unknown trans	99.8
2wm8_A	187	MDP-1, magnesium-dependent phosphatase 1; haloacid	99.8
3n28_A	335	Phosphoserine phosphatase; HAD family hydrolase, s	99.8
2qlt_A	275	(DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac	99.79
2pr7_A	137	Haloacid dehalogenase/epoxide hydrolase family; NP	99.77
2o2x_A	218	Hypothetical protein; structural genomics, joint c	99.76
3i28_A	555	Epoxide hydrolase 2; aromatic hydrocarbons catabol	99.75
2ho4_A	259	Haloacid dehalogenase-like hydrolase domain contai	99.73
2p9j_A	162	Hypothetical protein AQ2171; secsg, riken, PSI, st	99.72
2fpr_A	176	Histidine biosynthesis bifunctional protein HISB;	99.72
1wr8_A	231	Phosphoglycolate phosphatase; alpha / beta core do	99.71
3mn1_A	189	Probable YRBI family phosphatase; structural genom	99.71
3dnp_A	290	Stress response protein YHAX; structural PSI-2, pr	99.71
1l6r_A	227	Hypothetical protein TA0175; structural genomics,	99.71
3mmz_A	176	Putative HAD family hydrolase; structural genomics	99.71
2c4n_A	250	Protein NAGD; nucleotide phosphatase, HAD superfam	99.71
4dw8_A	279	Haloacid dehalogenase-like hydrolase; HAD, putativ	99.71
3ij5_A	211	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.7
1k1e_A	180	Deoxy-D-mannose-octulosonate 8-phosphate phosphat;	99.7
3mpo_A	279	Predicted hydrolase of the HAD superfamily; SGX, P	99.7
3n07_A	195	3-deoxy-D-manno-octulosonate 8-phosphate phosphat;	99.69
3l7y_A	304	Putative uncharacterized protein SMU.1108C; hydrol	99.68
3e8m_A	164	Acylneuraminate cytidylyltransferase; 2-keto-3-deo	99.68
3pgv_A	285	Haloacid dehalogenase-like hydrolase; structural g	99.66
2pq0_A	258	Hypothetical conserved protein GK1056; hyopthetica	99.66
3fzq_A	274	Putative hydrolase; YP_001086940.1, putative haloa	99.66
2b82_A	211	APHA, class B acid phosphatase; DDDD acid phosphat	99.65
3n1u_A	191	Hydrolase, HAD superfamily, subfamily III A; struc	99.64
3gyg_A	289	NTD biosynthesis operon putative hydrolase NTDB; P	99.64
2i7d_A	193	5'(3')-deoxyribonucleotidase, cytosolic type; hydr	99.64
2x4d_A	271	HLHPP, phospholysine phosphohistidine inorganic py	99.64
3skx_A	280	Copper-exporting P-type ATPase B; P1B-ATPase, ATP	99.63
3dao_A	283	Putative phosphatse; structural genomics, joint ce	99.63
3qgm_A	268	P-nitrophenyl phosphatase (PHO2); structural genom	99.63
1rkq_A	282	Hypothetical protein YIDA; two domain structure wi	99.61
3ewi_A	168	N-acylneuraminate cytidylyltransferase; beta barre	99.61
1vjr_A	271	4-nitrophenylphosphatase; TM1742, structural genom	99.61
3r4c_A	268	Hydrolase, haloacid dehalogenase-like hydrolase; h	99.6
3epr_A	264	Hydrolase, haloacid dehalogenase-like family; stru	99.6
3pdw_A	266	Uncharacterized hydrolase YUTF; structural genomic	99.6
2r8e_A	188	3-deoxy-D-manno-octulosonate 8-phosphate phosphata	99.59
1q92_A	197	5(3)-deoxyribonucleotidase; alpha-beta rossman fol	99.59
3zvl_A	416	Bifunctional polynucleotide phosphatase/kinase; hy	99.58
3a1c_A	287	Probable copper-exporting P-type ATPase A; ATP-bin	99.57
1nrw_A	288	Hypothetical protein, haloacid dehalogenase-like h	99.57
1yv9_A	264	Hydrolase, haloacid dehalogenase family; hypotheti	99.56
2rbk_A	261	Putative uncharacterized protein; HAD-like phospha	99.56
1rlm_A	271	Phosphatase; HAD family, rossman fold, hydrolase;	99.55
3nvb_A	387	Uncharacterized protein; protein FKBH, protein fkb	99.55
2i33_A	258	Acid phosphatase; HAD superfamily, hydrolase; 1.57	99.53
2b30_A	301	Pvivax hypothetical protein; SGPP, structural geno	99.53
3bwv_A	180	Putative 5'(3')-deoxyribonucleotidase; NP_764060.1	99.52
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	99.51
4fe3_A	297	Cytosolic 5'-nucleotidase 3; substrate complex, HA	99.51
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	99.5
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	99.48
1y8a_A	332	Hypothetical protein AF1437; structural genomics,	99.48
1nf2_A	268	Phosphatase; structural proteomics, HAD NEW fold,	99.44
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	99.43
4gxt_A	385	A conserved functionally unknown protein; structur	99.43
1xvi_A	275	MPGP, YEDP, putative mannosyl-3-phosphoglycerate p	99.43
2zos_A	249	MPGP, mannosyl-3-phosphoglycerate phosphatase; hal	99.4
2yj3_A	263	Copper-transporting ATPase; hydrolase, P-type ATPa	99.11
1s2o_A	244	SPP, sucrose-phosphatase; phosphohydrolase, HAD su	99.39
2hhl_A	195	CTD small phosphatase-like protein; CTD phosphatas	99.39
3f9r_A	246	Phosphomannomutase; trypanosome glycobiology struc	99.37
2ght_A	181	Carboxy-terminal domain RNA polymerase II polypept	99.36
3zx4_A	259	MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd	99.34
1ltq_A	301	Polynucleotide kinase; phosphatase, alpha/beta, P-	99.33
3ocu_A	262	Lipoprotein E; hydrolase, outer membrane; HET: NMN	99.28
1u02_A	239	Trehalose-6-phosphate phosphatase related protein;	99.26
3pct_A	260	Class C acid phosphatase; hydrolase, outer membran	99.24
2amy_A	246	PMM 2, phosphomannomutase 2; HS.459855, HS.313504,	99.13
2fue_A	262	PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ	99.13
3kc2_A	352	Uncharacterized protein YKR070W; HAD-like, mitocho	99.08
4as2_A	327	Phosphorylcholine phosphatase; hydrolase, HAD supe	98.85
2obb_A	142	Hypothetical protein; structural genomics, PSI-2,	98.79
3j08_A	645	COPA, copper-exporting P-type ATPase A; copper tra	98.52
3qle_A	204	TIM50P; chaperone, mitochondrion, preprotein trans	98.49
1xpj_A	126	Hypothetical protein; structural genomics, MCSG, p	98.42
3j09_A	723	COPA, copper-exporting P-type ATPase A; copper tra	98.4
2jc9_A	555	Cytosolic purine 5'-nucleotidase; cytosolic 5-prim	98.37
3rfu_A	736	Copper efflux ATPase; alpha helical, CPC, CXXC, AT	98.25
3ef0_A	372	RNA polymerase II subunit A C-terminal domain phos	98.22
3ar4_A	995	Sarcoplasmic/endoplasmic reticulum calcium ATPase;	98.18
1mhs_A	920	Proton pump, plasma membrane ATPase; ION transport	97.95
2zxe_A	1028	Na, K-ATPase alpha subunit; membrane protein, ION	97.83
3ixz_A	1034	Potassium-transporting ATPase alpha; ION pump, H+,	97.82
3shq_A	320	UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila	97.74
3b8c_A	885	ATPase 2, plasma membrane-type; P-type ATPase, pro	97.65
4g63_A	470	Cytosolic IMP-GMP specific 5'-nucleotidase; struct	97.33
3ef1_A	442	RNA polymerase II subunit A C-terminal domain phos	96.68
2hx1_A	284	Predicted sugar phosphatases of the HAD superfamil	94.12
1zjj_A	263	Hypothetical protein PH1952; alpha/beta hydrolase	92.31
2oyc_A	306	PLP phosphatase, pyridoxal phosphate phosphatase;	90.29
3geb_A	274	EYES absent homolog 2; hydrolase, activator, alter	89.23
1qyi_A	384	ZR25, hypothetical protein; structural genomics, P	80.1

>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}

Probab=99.94  E-value=5.3e-26  Score=183.38  Aligned_cols=200  Identities=12%  Similarity=0.062  Sum_probs=138.3

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHH--HHHccCChhHHHHHHHHHHHhCCCCHHHH---------HHH
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFN--QLRSTLPWNSLMDRMMKELHSQGKTVEDI---------ANC   66 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~   66 (265)
                      +|+|+||+||||+|+...     ..+++++|.+....  ..+................. .....+.+         ...
T Consensus         1 IkAViFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   79 (216)
T 3kbb_A            1 MEAVIFDMDGVLMDTEPLYFEAYRRVAESYGKPYTEDLHRRIMGVPEREGLPILMEALE-IKDSLENFKKRVHEEKKRVF   79 (216)
T ss_dssp             CCEEEEESBTTTBCCGGGHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHHTT-CCSCHHHHHHHHHHHHHHHH
T ss_pred             CeEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHhccchhhhhhhhhhccc-chhhHHHHHHHHHHHHHHHH
Confidence            489999999999998653     44566666542111  11111111111111111111 11111111         112


Q ss_pred             hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           67 LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        67 ~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      .....++||+.++++.|+++|++++++||+....+...++.+|+.++|+.+++.              ......||    
T Consensus        80 ~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~fd~~~~~--------------~~~~~~KP----  141 (216)
T 3kbb_A           80 SELLKENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYFDVMVFG--------------DQVKNGKP----  141 (216)
T ss_dssp             HHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECG--------------GGSSSCTT----
T ss_pred             HHhcccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccccccccc--------------cccCCCcc----
Confidence            234678999999999999999999999999999999999999999999998875              22233466    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                             +|.+++.+++++|++|++++||||+.+|+.+|+++|+..++...+|+.....+.+..  . ..+   .++.||
T Consensus       142 -------~p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~~i~~v~~g~~~~~~l~~~~--~-~~i---~~~~el  208 (216)
T 3kbb_A          142 -------DPEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIERIYGVVHSLNDGKALLEAG--A-VAL---VKPEEI  208 (216)
T ss_dssp             -------STHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCCCEEEECCSSSCCHHHHHTT--C-SEE---ECGGGH
T ss_pred             -------cHHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCcEEEEecCCCCCHHHHHhCC--C-cEE---CCHHHH
Confidence                   899999999999999999999999999999999999988765666665544443322  1 123   457889


Q ss_pred             HHHHHHHH
Q 044617          227 KKILLHLI  234 (265)
Q Consensus       227 ~~~l~~~~  234 (265)
                      .+.|++++
T Consensus       209 i~~l~eLL  216 (216)
T 3kbb_A          209 LNVLKEVL  216 (216)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHC
Confidence            88888763

>3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus}

Probab=99.92  E-value=2.1e-24  Score=176.94  Aligned_cols=203  Identities=12%  Similarity=0.033  Sum_probs=138.6

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccC--ChhHHHHHHHHHHHhCCCCHHHHHHH-------h
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTL--PWNSLMDRMMKELHSQGKTVEDIANC-------L   67 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------~   67 (265)
                      ++|+|+||+||||+++...     ..+++++|.+..........  ........+...........+.+...       +
T Consensus        22 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (247)
T 3dv9_A           22 DLKAVLFDMDGVLFDSMPNHAESWHKIMKRFGFGLSREEAYMHEGRTGASTINIVSRRERGHDATEEEIKAIYQAKTEEF  101 (247)
T ss_dssp             CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCccCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCCChHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence            4799999999999998642     44566666653332222221  22222222222222223333333221       1


Q ss_pred             ---cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc--ceEEecCceecCCCceEEeeccccccCC
Q 044617           68 ---RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF--SEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        68 ---~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f--~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                         ....++||+.++|+.|+++|++++++||+....+...++. |+..+|  +.+++.+              .....||
T Consensus       102 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~~~~~~~~--------------~~~~~kp  166 (247)
T 3dv9_A          102 NKCPKAERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQANLMVTAF--------------DVKYGKP  166 (247)
T ss_dssp             TTSCCCCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCGGGEECGG--------------GCSSCTT
T ss_pred             HhcccCCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCCCeEEecc--------------cCCCCCC
Confidence               2367899999999999999999999999999988888988 999999  7777742              1122345


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                                 |+.+++.+++++|++++++++|||+.||+.+|+++|...+.+..+...... +.+  ..++..+   ++
T Consensus       167 -----------~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~~~~~~~-l~~--~~ad~v~---~~  229 (247)
T 3dv9_A          167 -----------NPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIFTIAVNTGPLHDNV-LLN--EGANLLF---HS  229 (247)
T ss_dssp             -----------SSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSEEEEECCSSSCHHH-HHT--TTCSEEE---SS
T ss_pred             -----------CCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCeEEEEcCCCCCHHH-HHh--cCCCEEE---CC
Confidence                       899999999999999999999999999999999888766666544333322 221  1244556   99


Q ss_pred             HHHHHHHHHHHHHh
Q 044617          223 AEELKKILLHLIGA  236 (265)
Q Consensus       223 ~~el~~~l~~~~~~  236 (265)
                      +.||.++|+++++.
T Consensus       230 ~~el~~~l~~~~~~  243 (247)
T 3dv9_A          230 MPDFNKNWETLQSA  243 (247)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998764

>3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A

Probab=99.92  E-value=1.2e-24  Score=178.44  Aligned_cols=202  Identities=12%  Similarity=0.014  Sum_probs=139.1

Q ss_pred             CCceEEEEecCCCCCCCCc-----hHHHHHHhCchHHHHHHHccC--ChhHHHHHHHHHHHhCCCCHHHHHHH-------
Q 044617            1 MADVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHLFNQLRSTL--PWNSLMDRMMKELHSQGKTVEDIANC-------   66 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-------   66 (265)
                      |++|+|+|||||||+++..     ...+++++|............  ........+...........+.+...       
T Consensus        22 ~~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (243)
T 3qxg_A           22 KKLKAVLFDMDGVLFNSMPYHSEAWHQVMKTHGLDLSREEAYMHEGRTGASTINIVFQRELGKEATQEEIESIYHEKSIL  101 (243)
T ss_dssp             CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHTTTSCHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHH
T ss_pred             ccCCEEEEcCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHhCCCHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHH
Confidence            3479999999999999864     245566666653322222221  12222222222222222333332211       


Q ss_pred             h---cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc--ceEEecCceecCCCceEEeeccccccC
Q 044617           67 L---RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF--SEIYTNPTYVDEQGRLRILPYHDSTLS  141 (265)
Q Consensus        67 ~---~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f--~~i~~~~~~~d~~~~~~~~~~~~~~~k  141 (265)
                      .   ....++||+.++|+.|+++|++++++||+....+...++. ++..+|  +.+++.+              .....|
T Consensus       102 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~d~i~~~~--------------~~~~~k  166 (243)
T 3qxg_A          102 FNSYPEAERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHKELMVTAF--------------DVKYGK  166 (243)
T ss_dssp             HHTSSCCCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCGGGEECTT--------------TCSSCT
T ss_pred             HHhcccCCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCcceEEeHH--------------hCCCCC
Confidence            1   2467899999999999999999999999998888888888 999999  7787752              112234


Q ss_pred             CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCC
Q 044617          142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWS  221 (265)
Q Consensus       142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
                      |           |+.+++.+++++|++|+++++|||+.||+.+|+++|...+.+... ......+.+.  .++..+   +
T Consensus       167 p-----------~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~l~~~--~ad~v~---~  229 (243)
T 3qxg_A          167 P-----------NPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVNTG-PLDGQVLLDA--GADLLF---P  229 (243)
T ss_dssp             T-----------SSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCS-SSCHHHHHHT--TCSEEE---S
T ss_pred             C-----------ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEeCC-CCCHHHHHhc--CCCEEE---C
Confidence            5           899999999999999999999999999999999888766655544 3333322211  234556   9


Q ss_pred             CHHHHHHHHHHHH
Q 044617          222 SAEELKKILLHLI  234 (265)
Q Consensus       222 ~~~el~~~l~~~~  234 (265)
                      ++.||.++|++++
T Consensus       230 s~~el~~~l~~li  242 (243)
T 3qxg_A          230 SMQTLCDSWDTIM  242 (243)
T ss_dssp             CHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHhhh
Confidence            9999999988763

>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0

Probab=99.92  E-value=1.2e-24  Score=176.07  Aligned_cols=197  Identities=20%  Similarity=0.215  Sum_probs=134.8

Q ss_pred             CC-ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHcc---CChhHHHHHHHHHHHhCCCCHHH-------HH
Q 044617            1 MA-DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRST---LPWNSLMDRMMKELHSQGKTVED-------IA   64 (265)
Q Consensus         1 M~-~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-------~~   64 (265)
                      |+ +|+|+|||||||+++...     ..+++++|.+......+..   ..+.......    .  +...+.       +.
T Consensus         1 M~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~----~--~~~~~~~~~~~~~~~   74 (226)
T 3mc1_A            1 MSLYNYVLFDLDGTLTDSAEGITKSVKYSLNKFDIQVEDLSSLNKFVGPPLKTSFMEY----Y--NFDEETATVAIDYYR   74 (226)
T ss_dssp             -CCCCEEEECSBTTTBCCHHHHHHHHHHHHHTTTCCCSCGGGGGGGSSSCHHHHHHHH----H--CCCHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHH----h--CCCHHHHHHHHHHHH
Confidence            53 899999999999999642     3445555554221111111   1111111111    1  222211       11


Q ss_pred             HH-----hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617           65 NC-----LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        65 ~~-----~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                      ..     .....++||+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++.+              ....
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~  140 (226)
T 3mc1_A           75 DYFKAKGMFENKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFDAIVGSS--------------LDGK  140 (226)
T ss_dssp             HHHTTTGGGSCCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--------------TTSS
T ss_pred             HHHHHhCcccCccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhheeeeeccC--------------CCCC
Confidence            11     2346789999999999999999999999999999999999999999999888752              1122


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhh-hcCCCeeeEEEE
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRI-CSNPMLIKAKVH  218 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  218 (265)
                      .||           |+.+++.+++++|++++++++|||+.||+.||+++|...+.++.+ ......+ +.   .++..+ 
T Consensus       141 ~kp-----------~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g-~~~~~~~~~~---~ad~v~-  204 (226)
T 3mc1_A          141 LST-----------KEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYG-FGSYEELKNA---GANYIV-  204 (226)
T ss_dssp             SCS-----------HHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSS-SSCHHHHHHH---TCSEEE-
T ss_pred             CCC-----------CHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccC-CCCHHHHHHc---CCCEEE-
Confidence            345           999999999999999999999999999999999988776666643 3333323 22   234556 


Q ss_pred             eCCCHHHHHHHHHHHHH
Q 044617          219 EWSSAEELKKILLHLIG  235 (265)
Q Consensus       219 ~~~~~~el~~~l~~~~~  235 (265)
                        +++.||.++|.+...
T Consensus       205 --~s~~el~~~~~~~~~  219 (226)
T 3mc1_A          205 --NSVDELHKKILELRE  219 (226)
T ss_dssp             --SSHHHHHHHHHTC--
T ss_pred             --CCHHHHHHHHHHHhc
Confidence              899999988776543

>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.91  E-value=1.7e-24  Score=174.17  Aligned_cols=190  Identities=14%  Similarity=0.182  Sum_probs=128.7

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH-HHHHHc--cCChhHHHHHHHHHHHhCCC-CHH----HHHH--
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL-FNQLRS--TLPWNSLMDRMMKELHSQGK-TVE----DIAN--   65 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~----~~~~--   65 (265)
                      |++|+|+|||||||+|+...     ..+++++|.+.. ...+..  ...+.......      .+. ..+    .+.+  
T Consensus         2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~   75 (210)
T 2ah5_A            2 TSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC------LSKDQISEAVQIYRSYY   75 (210)
T ss_dssp             TTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTT------SCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCCHHHHHHHcCccHHHHHHHH------cCHHHHHHHHHHHHHHH
Confidence            33799999999999998652     445566665321 111111  11111111110      010 001    1111  


Q ss_pred             ---HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCC
Q 044617           66 ---CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        66 ---~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                         ......++||+.++|+.|++ |++++|+||+....+...++++|+..+|+.+++.+                ...||
T Consensus        76 ~~~~~~~~~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~----------------~~~Kp  138 (210)
T 2ah5_A           76 KAKGIYEAQLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSS----------------PEAPH  138 (210)
T ss_dssp             HHTGGGSCEECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC----------------SSCCS
T ss_pred             HHhccCCCCCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhheeeeecCC----------------CCCCC
Confidence               12235678999999999999 99999999999999999999999999999988751                22356


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                                 ||..++.+++++|++|++|++|||+.+|+.+|+++|...+++. +++.....+...  .++..+   ++
T Consensus       139 -----------~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~-~~~~~~~~l~~~--~a~~v~---~~  201 (210)
T 2ah5_A          139 -----------KADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAIT-WGFGEQADLLNY--QPDYIA---HK  201 (210)
T ss_dssp             -----------HHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-SSSSCHHHHHTT--CCSEEE---SS
T ss_pred             -----------ChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEc-CCCCCHHHHHhC--CCCEEE---CC
Confidence                       9999999999999999999999999999999999887655554 444322223211  234555   88


Q ss_pred             HHHHHHHH
Q 044617          223 AEELKKIL  230 (265)
Q Consensus       223 ~~el~~~l  230 (265)
                      +.||.++|
T Consensus       202 ~~el~~~l  209 (210)
T 2ah5_A          202 PLEVLAYF  209 (210)
T ss_dssp             TTHHHHHT
T ss_pred             HHHHHHHh
Confidence            88887653

>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}

Probab=99.91  E-value=1.2e-24  Score=178.46  Aligned_cols=131  Identities=13%  Similarity=0.119  Sum_probs=102.4

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|+.|+++|++++|+||+....+...++.+|+. +|+.+++.+              .....||      
T Consensus       108 ~~~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~~~~~~~--------------~~~~~Kp------  166 (240)
T 2hi0_A          108 KTGPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFDFALGEK--------------SGIRRKP------  166 (240)
T ss_dssp             SCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCSEEEEEC--------------TTSCCTT------
T ss_pred             cCCcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ceeEEEecC--------------CCCCCCC------
Confidence            4567899999999999999999999999999999999999998 899888742              1123355      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKK  228 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~  228 (265)
                           ||.++..+++++|++|++|++|||+.||+.+|+++|...+++. +++.....+...  .++..+   +++.||.+
T Consensus       167 -----~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~-~~~~~~~~~~~~--~a~~~~---~~~~el~~  235 (240)
T 2hi0_A          167 -----APDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVN-WGFRSVPFLQKH--GATVIV---DTAEKLEE  235 (240)
T ss_dssp             -----SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES-SSSSCHHHHHHT--TCCCEE---CSHHHHHH
T ss_pred             -----CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEC-CCCCchhHHHhc--CCCEEE---CCHHHHHH
Confidence                 8999999999999999999999999999999998887655554 333222222211  133445   88999877


Q ss_pred             HHH
Q 044617          229 ILL  231 (265)
Q Consensus       229 ~l~  231 (265)
                      +|.
T Consensus       236 ~l~  238 (240)
T 2hi0_A          236 AIL  238 (240)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            663

>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A

Probab=99.91  E-value=2.7e-23  Score=169.48  Aligned_cols=134  Identities=15%  Similarity=0.039  Sum_probs=107.6

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ....++||+.++|+.|+++|++++++||+....++..++.+|+..+|+.+++.+.              ....||     
T Consensus       101 ~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~~--------------~~~~kp-----  161 (237)
T 4ex6_A          101 GPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDS--------------VERGKP-----  161 (237)
T ss_dssp             GGGGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCSEEECTTT--------------SSSCTT-----
T ss_pred             cCCccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhheeeEEeCCC--------------CCCCCC-----
Confidence            4567899999999999999999999999999999999999999999998887521              112344     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                            |+.+++.+++++|++++++++|||+.||+.||+++|...++++.+...... +...  .++..+   .++.||.
T Consensus       162 ------~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-~~~~--~ad~v~---~~~~el~  229 (237)
T 4ex6_A          162 ------HPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDE-LMRA--GADTVV---DSFPAAV  229 (237)
T ss_dssp             ------SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSSSSCHHH-HHHT--TCSEEE---SSHHHHH
T ss_pred             ------CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecCCCCHHH-HHhc--CCCEEE---CCHHHHH
Confidence                  899999999999999999999999999999999888776666644333222 3221  234556   8999998


Q ss_pred             HHHHH
Q 044617          228 KILLH  232 (265)
Q Consensus       228 ~~l~~  232 (265)
                      ++|++
T Consensus       230 ~~l~~  234 (237)
T 4ex6_A          230 TAVLD  234 (237)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            88764

>4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A

Probab=99.90  E-value=6.1e-24  Score=175.92  Aligned_cols=201  Identities=13%  Similarity=0.113  Sum_probs=139.7

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHH---ccCChhHHHHHHHHHHHhCCCCH-------HHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLR---STLPWNSLMDRMMKELHSQGKTV-------EDIAN   65 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~   65 (265)
                      |++|+|+||+||||+|+...     ..++++.|.+.......   ...........+..... .....       +.+.+
T Consensus        26 ~~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  104 (259)
T 4eek_A           26 APFDAVLFDLDGVLVESEGIIAQVWQSVLAERGLHLDLTEIAMYFTGQRFDGVLAYLAQQHD-FVPPPDFLDVLETRFNA  104 (259)
T ss_dssp             CCCSEEEEESBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTTCCHHHHHHHHHHHHC-CCCCTTHHHHHHHHHHH
T ss_pred             cCCCEEEECCCCCcccCHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcC-CCCCHHHHHHHHHHHHH
Confidence            35799999999999998642     44556666653222222   12233333333222221 11111       11122


Q ss_pred             HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccce-EEecCceecCCCceEEeecccc-ccCCC
Q 044617           66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE-IYTNPTYVDEQGRLRILPYHDS-TLSHH  143 (265)
Q Consensus        66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~-i~~~~~~~d~~~~~~~~~~~~~-~~kp~  143 (265)
                      .+....++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+. +++.+              ... ..|| 
T Consensus       105 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~i~~~~--------------~~~~~~Kp-  169 (259)
T 4eek_A          105 AMTGVTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELAGEHIYDPS--------------WVGGRGKP-  169 (259)
T ss_dssp             HHTTCEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHHCSCEECGG--------------GGTTCCTT-
T ss_pred             HhccCCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhccceEEeHh--------------hcCcCCCC-
Confidence            225678899999999999999999999999999999999999999999988 77641              112 3355 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCc----hhhhhhcCCCeeeEEEEe
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP----LWDRICSNPMLIKAKVHE  219 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~  219 (265)
                                |+.+++.+++++|++++++++|||+.||+.+|+++|...+.+..++..    ...+...   .++..+  
T Consensus       170 ----------~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~~~~~---~ad~vi--  234 (259)
T 4eek_A          170 ----------HPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLLVPGHPHPDGAAALSRL---GAARVL--  234 (259)
T ss_dssp             ----------SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEECCTTSCCSSCHHHHHHH---TCSEEE--
T ss_pred             ----------ChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEccCCCcccccHHHHHhc---Ccchhh--
Confidence                      899999999999999999999999999999999988766666654332    2222221   134556  


Q ss_pred             CCCHHHHHHHHHHH
Q 044617          220 WSSAEELKKILLHL  233 (265)
Q Consensus       220 ~~~~~el~~~l~~~  233 (265)
                       +++.||.++|.+.
T Consensus       235 -~~l~el~~~l~~~  247 (259)
T 4eek_A          235 -TSHAELRAALAEA  247 (259)
T ss_dssp             -CSHHHHHHHHHHT
T ss_pred             -CCHHHHHHHHHhc
Confidence             9999999988763

>2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A

Probab=99.90  E-value=5.8e-24  Score=172.51  Aligned_cols=196  Identities=18%  Similarity=0.212  Sum_probs=134.4

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH-HHHHHc--cCChhHHHHHHHHHHHhCCCC--HHHHHHH----
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL-FNQLRS--TLPWNSLMDRMMKELHSQGKT--VEDIANC----   66 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~----   66 (265)
                      ||+|+|+||+||||+|+...     ..+++.+|.+.. ...+..  ...+......+..   .....  .+.+...    
T Consensus         1 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   77 (222)
T 2nyv_A            1 MSLRVILFDLDGTLIDSAKDIALALEKTLKELGLEEYYPDNVTKYIGGGVRALLEKVLK---DKFREEYVEVFRKHYLEN   77 (222)
T ss_dssp             CEECEEEECTBTTTEECHHHHHHHHHHHHHHTTCGGGCCSCGGGGCSSCHHHHHHHHHG---GGCCTHHHHHHHHHHHHC
T ss_pred             CCCCEEEECCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHHHhCcCHHHHHHHHhC---hHHHHHHHHHHHHHHHHh
Confidence            77899999999999999652     455666666521 111111  1122222222211   11111  1111211    


Q ss_pred             -hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           67 -LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        67 -~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                       .....++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++.+.              ....||   
T Consensus        78 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~i~~~~~--------------~~~~Kp---  140 (222)
T 2nyv_A           78 PVVYTKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDLIVGGDT--------------FGEKKP---  140 (222)
T ss_dssp             SCSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTS--------------SCTTCC---
T ss_pred             ccccCccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheEEEecCc--------------CCCCCC---
Confidence             13467899999999999999999999999999999999999999999998887521              112345   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                              |+..+..+++++|++++++++|||+.+|+.+|+++|...+++.. ++.....     ..++..+   +++.|
T Consensus       141 --------~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~-g~~~~~~-----~~~~~~~---~~~~e  203 (222)
T 2nyv_A          141 --------SPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALALW-GYVKLNS-----QIPDFTL---SRPSD  203 (222)
T ss_dssp             --------TTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEETT-SSCSCCC-----CCCSEEE---SSTTH
T ss_pred             --------ChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEcC-CCCCccc-----cCCCEEE---CCHHH
Confidence                    89999999999999999999999999999999887776555543 3322111     1234555   88999


Q ss_pred             HHHHHHHH
Q 044617          226 LKKILLHL  233 (265)
Q Consensus       226 l~~~l~~~  233 (265)
                      |.++|.+.
T Consensus       204 l~~~l~~~  211 (222)
T 2nyv_A          204 LVKLMDNH  211 (222)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHHHh
Confidence            98877554

>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}

Probab=99.90  E-value=4e-24  Score=173.85  Aligned_cols=192  Identities=15%  Similarity=0.154  Sum_probs=130.6

Q ss_pred             CceEEEEecCCCCCCCCc-----h-HHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCC--CHHHHHHH------h
Q 044617            2 ADVVVVFDFDRTLIDDDS-----D-NWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGK--TVEDIANC------L   67 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~------~   67 (265)
                      ++|+|+||+||||+++..     . ..++++++.+...................    .....  ....+...      .
T Consensus        24 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~   99 (231)
T 3kzx_A           24 QPTAVIFDWYNTLIDTSINIDRTTFYQVLDQMGYKNIDLDSIPNSTIPKYLITL----LGKRWKEATILYENSLEKSQKS   99 (231)
T ss_dssp             CCSEEEECTBTTTEETTSSCCHHHHHHHHHHTTCCCCCCTTSCTTTHHHHHHHH----HGGGHHHHHHHHHHHHHHCCSC
T ss_pred             CCCEEEECCCCCCcCCchhHHHHHHHHHHHHcCCCHHHHHHHhCccHHHHHHHH----hCchHHHHHHHHHHHHhhhccc
Confidence            479999999999999873     3 45555555542100000000111111111    00000  00111111      1


Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ....++||+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++.+              .....||     
T Consensus       100 ~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~~~--------------~~~~~Kp-----  160 (231)
T 3kzx_A          100 DNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSG--------------DTGTIKP-----  160 (231)
T ss_dssp             CCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEET--------------SSSCCTT-----
T ss_pred             ccceECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhheeeEEccc--------------ccCCCCC-----
Confidence            356779999999999999999999999999999999999999999999888752              1122345     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCc-eEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQ-RFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~-~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                            |+..++.+++++|++++ ++++|||+.||+.+|+++|...+.+.... .         ...+..+   .++.||
T Consensus       161 ------~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~~~~-~---------~~~~~~~---~~~~el  221 (231)
T 3kzx_A          161 ------SPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYGSTN-I---------IKDILSF---KNFYDI  221 (231)
T ss_dssp             ------SSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEECC---------------CCEEE---SSHHHH
T ss_pred             ------ChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEECCCC-C---------CCCceee---CCHHHH
Confidence                  88999999999999998 99999999999999988776655553321 1         1223445   999999


Q ss_pred             HHHHHHHHH
Q 044617          227 KKILLHLIG  235 (265)
Q Consensus       227 ~~~l~~~~~  235 (265)
                      .++|.++++
T Consensus       222 ~~~l~~~l~  230 (231)
T 3kzx_A          222 RNFICQLIN  230 (231)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhc
Confidence            999988753

>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}

Probab=99.90  E-value=3e-24  Score=176.81  Aligned_cols=171  Identities=12%  Similarity=0.125  Sum_probs=115.7

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH--HHHHHccCChhHHHHHHHHHHHhC-CCCHHH----------
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL--FNQLRSTLPWNSLMDRMMKELHSQ-GKTVED----------   62 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----------   62 (265)
                      |++|+|+||+||||+||...     ..+++++|.+..  ....+...........+....... ......          
T Consensus         3 MkiKaViFDlDGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (243)
T 4g9b_A            3 MKLQGVIFDLDGVITDTAHLHFQAWQQIAAEIGISIDAQFNESLKGISRDESLRRILQHGGKEGDFNSQERAQLAYRKNL   82 (243)
T ss_dssp             CCCCEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCTTGGGGGTTCCHHHHHHHHHHHTTCGGGCCHHHHHHHHHHHHH
T ss_pred             ccCcEEEEcCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhhcccchhHHHHHHHHHHHHH
Confidence            55799999999999998643     445566665421  111111111222222221111000 011100          


Q ss_pred             -HHHHh---cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeecccc
Q 044617           63 -IANCL---RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDS  138 (265)
Q Consensus        63 -~~~~~---~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~  138 (265)
                       ....+   ....++||+.++++.|+++|++++++||+..  ...+++.+|+..+|+.+++.+              ...
T Consensus        83 ~~~~~~~~~~~~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~fd~i~~~~--------------~~~  146 (243)
T 4g9b_A           83 LYVHSLRELTVNAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFFTFCADAS--------------QLK  146 (243)
T ss_dssp             HHHHHHHTCCGGGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGCSEECCGG--------------GCS
T ss_pred             HHHHHHHhcccccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhccccccccccc--------------ccc
Confidence             01111   2335789999999999999999999998754  567789999999999988752              223


Q ss_pred             ccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          139 TLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       139 ~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      ..||           +|+++..+++++|++|++|++|||+.+|+.+|+++|+..+++..+
T Consensus       147 ~~KP-----------~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~~~I~V~~g  195 (243)
T 4g9b_A          147 NSKP-----------DPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGMRSVGIGAG  195 (243)
T ss_dssp             SCTT-----------STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred             CCCC-----------cHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCEEEEECCC
Confidence            3466           799999999999999999999999999999999988877776543

>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*

Probab=99.90  E-value=1.7e-24  Score=173.16  Aligned_cols=189  Identities=15%  Similarity=0.132  Sum_probs=131.5

Q ss_pred             CceEEEEecCCCCCCCCc-hHHHHHHhCchHH--HHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHH
Q 044617            2 ADVVVVFDFDRTLIDDDS-DNWVVTQMGLTHL--FNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAA   78 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e   78 (265)
                      ++|+|+||+||||+++.. ...+++..|.+..  ....+...... ..........      ...........++||+.+
T Consensus         5 ~~k~iifDlDGTL~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~~~~~   77 (205)
T 3m9l_A            5 EIKHWVFDMDGTLTIAVHDFAAIREALSIPAEDDILTHLAALPAD-ESAAKHAWLL------EHERDLAQGSRPAPGAVE   77 (205)
T ss_dssp             GCCEEEECTBTTTEEEEECHHHHHHHTTCCTTSCHHHHHHHSCHH-HHHHHHHHHH------HTHHHHEEEEEECTTHHH
T ss_pred             cCCEEEEeCCCcCcccHHHHHHHHHHhCCCchHHHHHHHhcCChH-HHHHHHHHHH------HHHHHHhhcCCCCccHHH
Confidence            479999999999999754 3556666665431  11111111110 0000000000      011122345678999999


Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc--ceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF--SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGF  156 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f--~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~  156 (265)
                      +|+.|+++|++++++||+....+...++.+|+..+|  +.+++.+.               ...||           |+.
T Consensus        78 ~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~i~~~~~---------------~~~kp-----------~~~  131 (205)
T 3m9l_A           78 LVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAEADVLGRDE---------------APPKP-----------HPG  131 (205)
T ss_dssp             HHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCGGGEECTTT---------------SCCTT-----------SSH
T ss_pred             HHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCcceEEeCCC---------------CCCCC-----------CHH
Confidence            999999999999999999999999999999999999  77776421               12345           889


Q ss_pred             HHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      +++.+++++|++++++++|||+.||+.+|+++|..++++.+.. ...+      ..++..+   +++.||.+.+++-
T Consensus       132 ~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~-~~~~------~~ad~v~---~~~~el~~~~~~~  198 (205)
T 3m9l_A          132 GLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVNLPD-NPWP------ELTDWHA---RDCAQLRDLLSAE  198 (205)
T ss_dssp             HHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECSSSS-CSCG------GGCSEEC---SSHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEeCCC-Cccc------ccCCEEe---CCHHHHHHHHHhc
Confidence            9999999999999999999999999999998887666666543 2111      1234445   8999998887754

>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0

Probab=99.90  E-value=3.7e-23  Score=172.24  Aligned_cols=141  Identities=8%  Similarity=-0.036  Sum_probs=109.7

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccc-cceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGC-FSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~-f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      ....++||+.++|+.|+++|++++++||+....+...++.+++..+ |+.+++.+              .....||    
T Consensus       108 ~~~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~~~~~~~--------------~~~~~kp----  169 (277)
T 3iru_A          108 QRSQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPASTVFAT--------------DVVRGRP----  169 (277)
T ss_dssp             HTCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCSEEECGG--------------GSSSCTT----
T ss_pred             ccCccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCceEecHH--------------hcCCCCC----
Confidence            3468899999999999999999999999999999999999998888 78777742              1222345    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCC-ceEEEEcCCCCCcccccCCCCCCeeeecCCCc----------------------hh
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGK-QRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP----------------------LW  203 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~-~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~----------------------~~  203 (265)
                             |+.+++.+++++|+++ +++++|||+.||+.+|+++|...+++..+...                      ..
T Consensus       170 -------~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (277)
T 3iru_A          170 -------FPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAE  242 (277)
T ss_dssp             -------SSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHH
T ss_pred             -------CHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecCCcccccchhhhhhcchhhhhhhhhhhH
Confidence                   8999999999999999 99999999999999999988766666544220                      11


Q ss_pred             hhhhcCCCeeeEEEEeCCCHHHHHHHHHHHHHhhc
Q 044617          204 DRICSNPMLIKAKVHEWSSAEELKKILLHLIGAIS  238 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~~  238 (265)
                      ..+..  ..++..+   +++.||.++|.++-...+
T Consensus       243 ~~l~~--~~ad~v~---~~~~el~~~l~~~~~~~~  272 (277)
T 3iru_A          243 QRLFN--AGAHYVI---DSVADLETVITDVNRRLA  272 (277)
T ss_dssp             HHHHH--HTCSEEE---SSGGGTHHHHHHHHHHHH
T ss_pred             HHHhh--CCCCEEe---cCHHHHHHHHHHHHHHHh
Confidence            11211  1234556   899999999888765544

>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}

Probab=99.90  E-value=1.4e-23  Score=170.27  Aligned_cols=200  Identities=11%  Similarity=0.024  Sum_probs=136.3

Q ss_pred             CceEEEEecCCCCCCCCc-----hHHHHHHhCchHHHHHHHcc--CChhHHHHHHHHHHHhCCCCHHHH-----------
Q 044617            2 ADVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHLFNQLRST--LPWNSLMDRMMKELHSQGKTVEDI-----------   63 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-----------   63 (265)
                      |+|+|+||+||||+++..     ...++++.|.+.....+...  .........+..... .....+.+           
T Consensus         5 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   83 (233)
T 3s6j_A            5 PQTSFIFDLDGTLTDSVYQNVAAWKEALDAENIPLAMWRIHRKIGMSGGLMLKSLSRETG-MSITDEQAERLSEKHAQAY   83 (233)
T ss_dssp             CCCEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCHHHHHHHTTSCHHHHHHHHHHC-----CCHHHHHHHHHHHHHHH
T ss_pred             cCcEEEEcCCCccccChHHHHHHHHHHHHHcCCCCCHHHHHHHcCCcHHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHH
Confidence            479999999999999864     24455566655322222111  111111111111100 01111111           


Q ss_pred             HHHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617           64 ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        64 ~~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      ........++|++.++|+.|+++|++++++||+....+...++.+|+..+|+.+++.+              .....|| 
T Consensus        84 ~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp-  148 (233)
T 3s6j_A           84 ERLQHQIIALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKINIVTRD--------------DVSYGKP-  148 (233)
T ss_dssp             HHTGGGCEECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSCEECGG--------------GSSCCTT-
T ss_pred             HHhhccCccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhheeeccc--------------cCCCCCC-
Confidence            1122346789999999999999999999999999999999999999999999888752              1122345 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCH
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSA  223 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (265)
                                |+.+++.+++++|++++++++|||+.||+.+|+++|...+.+..+...... +...  .++..+   +++
T Consensus       149 ----------~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g~~~~~~-l~~~--~ad~v~---~~~  212 (233)
T 3s6j_A          149 ----------DPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSGGYDIGE-LERA--GALRVY---EDP  212 (233)
T ss_dssp             ----------STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGGSCCHHH-HHHT--TCSEEE---SSH
T ss_pred             ----------ChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCCCCchHh-HHhc--CCCEEE---CCH
Confidence                      899999999999999999999999999999999988766677654333333 3221  134556   899


Q ss_pred             HHHHHHHHHH
Q 044617          224 EELKKILLHL  233 (265)
Q Consensus       224 ~el~~~l~~~  233 (265)
                      .||.++|++.
T Consensus       213 ~el~~~l~~~  222 (233)
T 3s6j_A          213 LDLLNHLDEI  222 (233)
T ss_dssp             HHHHHTGGGT
T ss_pred             HHHHHHHHHH
Confidence            9998887654

>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}

Probab=99.90  E-value=5.7e-23  Score=166.54  Aligned_cols=137  Identities=13%  Similarity=0.135  Sum_probs=108.1

Q ss_pred             HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           65 NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        65 ~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      ..+....++|++.++++.|+++|++++++||+....+...++.+|+..+|+.+++.+              .....||  
T Consensus        90 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp--  153 (230)
T 3um9_A           90 SEYLSLTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFDHLISVD--------------EVRLFKP--  153 (230)
T ss_dssp             HHTTSCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEGG--------------GTTCCTT--
T ss_pred             HHHhcCCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcceeEehh--------------hcccCCC--
Confidence            334567889999999999999999999999999999999999999999999888852              1223345  


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                               |+..++.+++++|++++++++|||+.||+.+|+++|...+.+.+.+... ..+.   ..++..+   +++.
T Consensus       154 ---------~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~-~~~~---~~~~~~~---~~~~  217 (230)
T 3um9_A          154 ---------HQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCWINRSNGVF-DQLG---VVPDIVV---SDVG  217 (230)
T ss_dssp             ---------CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEEECTTSCCC-CCSS---CCCSEEE---SSHH
T ss_pred             ---------ChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEEEeCCCCcc-cccc---CCCcEEe---CCHH
Confidence                     8999999999999999999999999999999999887655555443222 2111   1344556   9999


Q ss_pred             HHHHHHHHH
Q 044617          225 ELKKILLHL  233 (265)
Q Consensus       225 el~~~l~~~  233 (265)
                      ||.++|.++
T Consensus       218 el~~~l~~~  226 (230)
T 3um9_A          218 VLASRFSPV  226 (230)
T ss_dssp             HHHHTCCC-
T ss_pred             HHHHHHHHh
Confidence            998877654

>2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A*

Probab=99.89  E-value=9.1e-23  Score=166.97  Aligned_cols=136  Identities=13%  Similarity=0.136  Sum_probs=106.5

Q ss_pred             HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                      .+....++||+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++.+              .....||   
T Consensus       100 ~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp---  162 (240)
T 2no4_A          100 AYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSAD--------------DLKIYKP---  162 (240)
T ss_dssp             HHHTCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGG--------------GTTCCTT---
T ss_pred             HHhcCCCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcCEEEEcc--------------ccCCCCC---
Confidence            34467889999999999999999999999999999999999999999999888752              1122355   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCee-eEEEEeCCCHH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLI-KAKVHEWSSAE  224 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  224 (265)
                              ++..++.+++++|++++++++|||+.+|+.+|+++|...+.+..+ .. .....   ..+ +..+   +++.
T Consensus       163 --------~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~-~~-~~~~~---~~~~~~~~---~~~~  226 (240)
T 2no4_A          163 --------DPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ-GN-PPEYE---FAPLKHQV---NSLS  226 (240)
T ss_dssp             --------SHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT-CC-CCCCT---TSCCSEEE---SSGG
T ss_pred             --------CHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC-CC-CCccc---CCCCceee---CCHH
Confidence                    899999999999999999999999999999998877765655543 22 11111   123 4555   8899


Q ss_pred             HHHHHHHHHH
Q 044617          225 ELKKILLHLI  234 (265)
Q Consensus       225 el~~~l~~~~  234 (265)
                      ||.++|.++.
T Consensus       227 el~~~l~~~~  236 (240)
T 2no4_A          227 ELWPLLAKNV  236 (240)
T ss_dssp             GHHHHHCC--
T ss_pred             HHHHHHHHhh
Confidence            9988776543

>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}

Probab=99.89  E-value=5.6e-23  Score=167.01  Aligned_cols=137  Identities=13%  Similarity=0.138  Sum_probs=109.1

Q ss_pred             HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           65 NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        65 ~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      ..+....++|++.++|+.|+++|++++++||+....+...++.+|+..+|+.+++..              .....||  
T Consensus        93 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp--  156 (233)
T 3umb_A           93 REYACLSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDHVLSVD--------------AVRLYKT--  156 (233)
T ss_dssp             HHHHSCEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSEEEEGG--------------GTTCCTT--
T ss_pred             HHHhcCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCEEEEec--------------ccCCCCc--
Confidence            334567889999999999999999999999999999999999999999999888752              1223355  


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                               ++.++..+++++|++++++++|||+.||+.+|+++|...+.+..++..... +.   ..++..+   +++.
T Consensus       157 ---------~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~~~~~~~~~-~~---~~~~~v~---~~~~  220 (233)
T 3umb_A          157 ---------APAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWINRLGHPPEA-LD---VAPAAAG---HDMR  220 (233)
T ss_dssp             ---------SHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEECTTCCCCCS-SS---CCCSEEE---SSHH
T ss_pred             ---------CHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCCchh-cc---CCCCEEE---CCHH
Confidence                     899999999999999999999999999999999888765555544333222 21   1244556   9999


Q ss_pred             HHHHHHHHH
Q 044617          225 ELKKILLHL  233 (265)
Q Consensus       225 el~~~l~~~  233 (265)
                      ||.++|++.
T Consensus       221 el~~~l~~~  229 (233)
T 3umb_A          221 DLLQFVQAR  229 (233)
T ss_dssp             HHHHHHHC-
T ss_pred             HHHHHHHHh
Confidence            999988653

>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}

Probab=99.89  E-value=1.4e-22  Score=166.11  Aligned_cols=147  Identities=12%  Similarity=0.107  Sum_probs=110.9

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++.+              .....||      
T Consensus        92 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp------  151 (241)
T 2hoq_A           92 YLREVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFEHVIISD--------------FEGVKKP------  151 (241)
T ss_dssp             HCCBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGG--------------GGTCCTT------
T ss_pred             hCCCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhccEEEEeC--------------CCCCCCC------
Confidence            45689999999999999999999999999999999999999999999888752              1122345      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                           ++..++.+++++|++++++++|||+. ||+.+|+++|...+.+ .+|........ ....++..+   +++.||.
T Consensus       152 -----~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v-~~g~~~~~~~~-~~~~~~~~i---~~~~el~  221 (241)
T 2hoq_A          152 -----HPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWF-RYGKHSERELE-YRKYADYEI---DNLESLL  221 (241)
T ss_dssp             -----CHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE-CCSCCCHHHHT-TGGGCSEEE---SSTTHHH
T ss_pred             -----CHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEEE-CCCCCCccccc-ccCCCCEEE---CCHHHHH
Confidence                 88999999999999999999999998 9999999888765555 44543322221 001234556   8899998


Q ss_pred             HHHHHHHHhhccccccccccccCCCcc
Q 044617          228 KILLHLIGAISIKEDVDSTVSSQPNSS  254 (265)
Q Consensus       228 ~~l~~~~~~~~~~~~~~~~~~~~~~~~  254 (265)
                      ++|.++         +.+....+|||.
T Consensus       222 ~~l~~~---------~~~~~~~~~~~~  239 (241)
T 2hoq_A          222 EVLARE---------SSSNKKVHPPRQ  239 (241)
T ss_dssp             HHHHHC---------CSCSSCSCCC--
T ss_pred             HHHHHH---------hhccCCCCCccc
Confidence            876532         333456677764

>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}

Probab=99.89  E-value=1.7e-23  Score=172.93  Aligned_cols=130  Identities=9%  Similarity=0.030  Sum_probs=101.7

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++++.|+++|++++++|++.  .+...++.+|+.++|+.+++.+              .....||      
T Consensus       114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~i~~~~--------------~~~~~KP------  171 (250)
T 4gib_A          114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDFIADAG--------------KCKNNKP------  171 (250)
T ss_dssp             GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSEECCGG--------------GCCSCTT------
T ss_pred             ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccceeeccc--------------ccCCCCC------
Confidence            34679999999999999999999887764  3567789999999999998852              2223466      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH-H
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL-K  227 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el-~  227 (265)
                           +|..+..+++++|++|++|+||||+.+|+.+|+++|+..+++...    .. +    ..++..+   +++.|| .
T Consensus       172 -----~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~~~----~~-~----~~ad~vi---~~l~eL~~  234 (250)
T 4gib_A          172 -----HPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVGNY----EN-L----KKANLVV---DSTNQLKF  234 (250)
T ss_dssp             -----SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESCT----TT-T----TTSSEEE---SSGGGCCH
T ss_pred             -----cHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEECCh----hH-h----ccCCEEE---CChHhCCH
Confidence                 889999999999999999999999999999999988876666432    11 1    1245556   888887 6


Q ss_pred             HHHHHHHHhh
Q 044617          228 KILLHLIGAI  237 (265)
Q Consensus       228 ~~l~~~~~~~  237 (265)
                      +.|++..++.
T Consensus       235 ~~i~~~~n~~  244 (250)
T 4gib_A          235 EYIQEKYNEY  244 (250)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            7777766553

>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}

Probab=99.89  E-value=2.2e-23  Score=166.50  Aligned_cols=193  Identities=11%  Similarity=0.120  Sum_probs=127.3

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH---HHHHHccCChhHHHHHHHHHHHhCCCCHHHH----HHHhc
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL---FNQLRSTLPWNSLMDRMMKELHSQGKTVEDI----ANCLR   68 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~   68 (265)
                      ||+|+|+||+||||+++...     ..++++.|.+..   ..... ..........+..... .....+.+    .....
T Consensus         3 ~m~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~   80 (214)
T 3e58_A            3 AMVEAIIFDMDGVLFDTEKYYYDRRASFLGQKGISIDHLPPSFFI-GGNTKQVWENILRDEY-DKWDVSTLQEEYNTYKQ   80 (214)
T ss_dssp             -CCCEEEEESBTTTBCCHHHHHHHHHHHHHHTTCCCTTSCHHHHT-TSCGGGCHHHHHGGGG-GGSCHHHHHHHHHHHHH
T ss_pred             ccccEEEEcCCCCccccHHHHHHHHHHHHHHcCCCCCHHHHHHHc-CCCHHHHHHHHHHhhc-CCCCHHHHHHHHHHHHH
Confidence            67899999999999998652     344555554311   11111 1111111111111100 01111111    11111


Q ss_pred             ------CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCC
Q 044617           69 ------QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        69 ------~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                            ...++|++.++|+.|+++|++++++||+....++..++.+|+..+|+.+++.+              .....||
T Consensus        81 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp  146 (214)
T 3e58_A           81 NNPLPYKELIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDIVLSGE--------------EFKESKP  146 (214)
T ss_dssp             HSCCCHHHHBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGG--------------GCSSCTT
T ss_pred             HhhcccCCCcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheeeEeecc--------------cccCCCC
Confidence                  13578999999999999999999999999999999999999999999888852              1122345


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                                 |+.+++.+++++|++++++++|||+.||+.+|+++|...+.+...+.....      ..++..+   ++
T Consensus       147 -----------~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~~~~------~~a~~~~---~~  206 (214)
T 3e58_A          147 -----------NPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRDNEFGMDQ------SAAKGLL---DS  206 (214)
T ss_dssp             -----------SSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECCSSSCCCC------TTSSEEE---SS
T ss_pred             -----------ChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECCCCccchh------ccHHHHH---HH
Confidence                       899999999999999999999999999999999988765555543332211      2344556   78


Q ss_pred             HHHHHHH
Q 044617          223 AEELKKI  229 (265)
Q Consensus       223 ~~el~~~  229 (265)
                      +.||.++
T Consensus       207 ~~el~~~  213 (214)
T 3e58_A          207 LTDVLDL  213 (214)
T ss_dssp             GGGGGGG
T ss_pred             HHHHHhh
Confidence            8877653

>2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii}

Probab=99.89  E-value=1.5e-22  Score=164.32  Aligned_cols=197  Identities=14%  Similarity=0.119  Sum_probs=129.7

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHH---HHc------------cCChh---HHHHHHHHHHHhCC
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQ---LRS------------TLPWN---SLMDRMMKELHSQG   57 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~---~~~------------~~~~~---~~~~~~~~~~~~~~   57 (265)
                      +|+|+|+||+||||+|+...     ..+++++|.......   +..            .....   .....+...   .+
T Consensus         2 ~m~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~   78 (235)
T 2om6_A            2 REVKLVTFDVWNTLLDLNIMLDEFSHQLAKISGLHIKDVANAVIEVRNEIKKMRAQASEDPRKVLTGSQEALAGK---LK   78 (235)
T ss_dssp             CCCCEEEECCBTTTBCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHHHH---HT
T ss_pred             CCceEEEEeCCCCCCCcchhHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHhhhhcCCCcchHHHHHHHHHHH---hC
Confidence            04799999999999998642     345555665422110   111            11122   122222111   12


Q ss_pred             CCHHH-------HHHHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHHhcCcccccceEEecCceecCC
Q 044617           58 KTVED-------IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDAN---QFYIETIMEHHGLLGCFSEIYTNPTYVDEQ  127 (265)
Q Consensus        58 ~~~~~-------~~~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~---~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~  127 (265)
                      .....       .........++|++.++|+.|+++|++++++||+.   ...+...++.+|+..+|+.+++..      
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~~~~~~------  152 (235)
T 2om6_A           79 VDVELVKRATARAILNVDESLVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDKTFFAD------  152 (235)
T ss_dssp             CCHHHHHHHHHHHHHHCCGGGBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSEEEEHH------
T ss_pred             CCHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhhheecc------
Confidence            22211       11122223458999999999999999999999999   888999999999999999888741      


Q ss_pred             CceEEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhh
Q 044617          128 GRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRI  206 (265)
Q Consensus       128 ~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~  206 (265)
                              .....||           ++..+..+++++|++++++++|||+. ||+.+|+++|...+.+. ++..... +
T Consensus       153 --------~~~~~kp-----------~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~~~-~~~~~~~-~  211 (235)
T 2om6_A          153 --------EVLSYKP-----------RKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVWIN-QEGDKVR-K  211 (235)
T ss_dssp             --------HHTCCTT-----------CHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEEEC-TTCCSCE-E
T ss_pred             --------ccCCCCC-----------CHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEEEC-CCCCCcc-c
Confidence                    1122345           89999999999999999999999999 99999988776544443 3322111 1


Q ss_pred             hcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          207 CSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      ..   .++..+   +++.||.++|+++
T Consensus       212 ~~---~~~~~~---~~~~el~~~l~~~  232 (235)
T 2om6_A          212 LE---ERGFEI---PSIANLKDVIELI  232 (235)
T ss_dssp             EE---TTEEEE---SSGGGHHHHHHHT
T ss_pred             CC---CCcchH---hhHHHHHHHHHHH
Confidence            11   123444   8999998887654

>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}

Probab=99.89  E-value=1.8e-23  Score=171.09  Aligned_cols=192  Identities=18%  Similarity=0.168  Sum_probs=130.2

Q ss_pred             CceEEEEecCCCCCCCCc-----hHHHHHHhCchHHHHHHHccC--ChhHHHHHHHHHHHhCCCCHHHH-------H---
Q 044617            2 ADVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHLFNQLRSTL--PWNSLMDRMMKELHSQGKTVEDI-------A---   64 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-------~---   64 (265)
                      |+|+|+||+||||+++..     ...+++..|.+.....+....  .........      .+...+.+       .   
T Consensus        28 mik~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~  101 (240)
T 3sd7_A           28 NYEIVLFDLDGTLTDPKEGITKSIQYSLNSFGIKEDLENLDQFIGPPLHDTFKEY------YKFEDKKAKEAVEKYREYF  101 (240)
T ss_dssp             CCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCGGGGGGGSSSCHHHHHHHT------SCCCHHHHHHHHHHHHHHH
T ss_pred             hccEEEEecCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHHhCccHHHHHHHH------hCCCHHHHHHHHHHHHHHH
Confidence            359999999999999864     244555555541111111111  111111100      02221111       1   


Q ss_pred             --HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCC
Q 044617           65 --NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        65 --~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                        .......++||+.++|+.|+++|++++|+||+....++..++.+|+..+|+.+++.+              .....||
T Consensus       102 ~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~kp  167 (240)
T 3sd7_A          102 ADKGIFENKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFKYIAGSN--------------LDGTRVN  167 (240)
T ss_dssp             HHTGGGCCEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEEC--------------TTSCCCC
T ss_pred             HHhcccccccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEEEEEecc--------------ccCCCCC
Confidence              112346789999999999999999999999999999999999999999999888752              1112345


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCC-CceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWS  221 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (265)
                                 |+.+++.+++++|++ ++++++|||+.||+.+|+++|...+.+..+......+...   .++..+   +
T Consensus       168 -----------~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~~---~ad~v~---~  230 (240)
T 3sd7_A          168 -----------KNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYGYGSFEEISES---EPTYIV---E  230 (240)
T ss_dssp             -----------HHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSSSCCHHHHHHH---CCSEEE---S
T ss_pred             -----------CHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCCCCCHHHHhhc---CCCEEE---C
Confidence                       999999999999999 9999999999999999998887666665433232322122   234556   7


Q ss_pred             CHHHHHHHH
Q 044617          222 SAEELKKIL  230 (265)
Q Consensus       222 ~~~el~~~l  230 (265)
                      ++.||.++|
T Consensus       231 ~~~el~~~l  239 (240)
T 3sd7_A          231 NVESIKDIL  239 (240)
T ss_dssp             SSTTHHHHH
T ss_pred             CHHHHHHHh
Confidence            888887765

>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.89  E-value=1.7e-22  Score=164.53  Aligned_cols=197  Identities=14%  Similarity=0.131  Sum_probs=133.7

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchH---HHHHHHcc----------------CChhHHHHH-HHHHHHh
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTH---LFNQLRST----------------LPWNSLMDR-MMKELHS   55 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~---~~~~~~~~----------------~~~~~~~~~-~~~~~~~   55 (265)
                      |++|+|+||+||||+++...     ..+++++|.+.   ........                ......... +...+..
T Consensus         3 m~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (240)
T 3qnm_A            3 LKYKNLFFDLDDTIWAFSRNARDTFEEVYQKYSFDRYFDSFDHYYTLYQRRNTELWLEYGEGKVTKEELNRQRFFYPLQA   82 (240)
T ss_dssp             CCCSEEEECCBTTTBCHHHHHHHHHHHHHHHTTGGGTSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred             CCceEEEEcCCCCCcCchhhHHHHHHHHHHHcCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence            56899999999999998642     34666666653   11111100                111111111 1122222


Q ss_pred             CCCC-HHHH-------HH-HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecC
Q 044617           56 QGKT-VEDI-------AN-CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDE  126 (265)
Q Consensus        56 ~~~~-~~~~-------~~-~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~  126 (265)
                      .+.. ....       .. ......++|++.++|+.|+ +|++++++||+....+...++.+|+..+|+.+++.+     
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~~~~~~~-----  156 (240)
T 3qnm_A           83 VGVEDEALAERFSEDFFAIIPTKSGLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFKKIILSE-----  156 (240)
T ss_dssp             TTCCCHHHHHHHHHHHHHHGGGCCCBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGG-----
T ss_pred             cCCCcHHHHHHHHHHHHHHhhhcCCcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhceeEEEec-----
Confidence            3332 1111       11 2245678999999999999 899999999999999999999999999999888752     


Q ss_pred             CCceEEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhh
Q 044617          127 QGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDR  205 (265)
Q Consensus       127 ~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~  205 (265)
                               .....||           |+.+++.+++++|++|+++++|||+. ||+.+|+++|...+.+.+.. .  ..
T Consensus       157 ---------~~~~~kp-----------~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~~~~~-~--~~  213 (240)
T 3qnm_A          157 ---------DLGVLKP-----------RPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFYNVTE-R--TV  213 (240)
T ss_dssp             ---------GTTCCTT-----------SHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECCSC-C--CC
T ss_pred             ---------cCCCCCC-----------CHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEEcCCC-C--CC
Confidence                     1122345           89999999999999999999999995 99999998777555554432 2  11


Q ss_pred             hhcCCCeeeEEEEeCCCHHHHHHHHHH
Q 044617          206 ICSNPMLIKAKVHEWSSAEELKKILLH  232 (265)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~el~~~l~~  232 (265)
                      .   ...++..+   +++.|+..+++.
T Consensus       214 ~---~~~~d~vi---~sl~e~~~~~~~  234 (240)
T 3qnm_A          214 F---PFQPTYHI---HSLKELMNLLEG  234 (240)
T ss_dssp             C---SSCCSEEE---SSTHHHHHHTC-
T ss_pred             c---CCCCceEE---CCHHHHHHHHhc
Confidence            1   12345666   999999887654

>2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6

Probab=99.89  E-value=4e-23  Score=167.84  Aligned_cols=136  Identities=10%  Similarity=0.042  Sum_probs=103.2

Q ss_pred             CCCCChhHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSL-GCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~-g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++|+.|+++ |++++|+||+....+...++.+|+..+|+.+++...             .....||     
T Consensus        91 ~~~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~-------------~~~~~k~-----  152 (234)
T 2hcf_A           91 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADD-------------ALDRNEL-----  152 (234)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTT-------------CSSGGGH-----
T ss_pred             CCCcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCcceecCC-------------CcCccch-----
Confidence            356789999999999999 999999999999999999999999999886554310             0001123     


Q ss_pred             cCCCCchHHHHHHHHHhcC--CCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFG--CGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~g--i~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                            ++..++.+++++|  ++|+++++|||+.||+.+|+++|...+.+... ......+..  ..++..+   .++.|
T Consensus       153 ------~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~~~~~~~--~~a~~v~---~~~~e  220 (234)
T 2hcf_A          153 ------PHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG-NFTMEELAR--HKPGTLF---KNFAE  220 (234)
T ss_dssp             ------HHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS-SSCHHHHHT--TCCSEEE---SCSCC
T ss_pred             ------HHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CCCHHHHHh--CCCCEEe---CCHHh
Confidence                  6788999999999  99999999999999999998877765666543 332222221  1234555   78888


Q ss_pred             HHHHHHHHH
Q 044617          226 LKKILLHLI  234 (265)
Q Consensus       226 l~~~l~~~~  234 (265)
                      |.++|.++.
T Consensus       221 l~~~l~~~~  229 (234)
T 2hcf_A          221 TDEVLASIL  229 (234)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            888887765

>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A

Probab=99.89  E-value=1.6e-22  Score=164.35  Aligned_cols=136  Identities=18%  Similarity=0.227  Sum_probs=107.7

Q ss_pred             hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           67 LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        67 ~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      .....++|++.++|+.|+++ ++++++||+....+...++.+|+..+|+.+++.+              .....||    
T Consensus        96 ~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~~--------------~~~~~kp----  156 (234)
T 3u26_A           96 QRYGELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDSITTSE--------------EAGFFKP----  156 (234)
T ss_dssp             HHHCCBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEHH--------------HHTBCTT----
T ss_pred             HhhCCcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcceeEecc--------------ccCCCCc----
Confidence            34578899999999999999 9999999999999999999999999999888742              1122355    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                             ++.+++.+++++|++++++++|||+. ||+.+|+++|...+.+..++ .... ...   .++..+   +++.|
T Consensus       157 -------~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~-~~~~-~~~---~a~~~~---~~~~e  221 (234)
T 3u26_A          157 -------HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKG-EKRE-FWD---KCDFIV---SDLRE  221 (234)
T ss_dssp             -------SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSSS-TTGG-GGG---GCSEEE---SSTHH
T ss_pred             -------CHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCCC-Cccc-ccc---CCCEee---CCHHH
Confidence                   89999999999999999999999997 99999988777656665443 2222 111   344556   89999


Q ss_pred             HHHHHHHHHHh
Q 044617          226 LKKILLHLIGA  236 (265)
Q Consensus       226 l~~~l~~~~~~  236 (265)
                      |.++|.++...
T Consensus       222 l~~~l~~~~~~  232 (234)
T 3u26_A          222 VIKIVDELNGQ  232 (234)
T ss_dssp             HHHHHHHHC--
T ss_pred             HHHHHHHHhhc
Confidence            99998877543

>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0

Probab=99.88  E-value=2.6e-22  Score=161.42  Aligned_cols=171  Identities=15%  Similarity=0.128  Sum_probs=127.4

Q ss_pred             CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHcc-----CChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhH
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRST-----LPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHV   76 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   76 (265)
                      |+|+|+|||||||++++....+.+..+...........     ..+..........  ..+...+.+........++||+
T Consensus         3 ~~k~vifDlDGTL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~   80 (217)
T 3m1y_A            3 LQKLAVFDFDSTLVNAETIESLARAWGVFDEVKTITLKAMNGETDFHKSLILRVSK--LKNMPLKLAKEVCESLPLFEGA   80 (217)
T ss_dssp             CCEEEEEECBTTTBSSCHHHHHHHHTTCHHHHTTCCCC----CCCHHHHHHHHHHT--TTTCBHHHHHHHHTTCCBCBTH
T ss_pred             CCcEEEEeCCCCCCCchhHHHHHHHcCchHHHHHHHHHHHcCcCCHHHHHHHHHHH--hcCCCHHHHHHHHhcCcCCCCH
Confidence            47999999999999998877777777766543332211     1222222222111  1356667777777788999999


Q ss_pred             HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEe-eccccccCCCcccccCCCCchH
Q 044617           77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL-PYHDSTLSHHGCNLCPSNLCKG  155 (265)
Q Consensus        77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~-~~~~~~~kp~~~~~~~~~~~K~  155 (265)
                      .++|+.|+++|++++++||+....++..++.+|+..+|+.+++..     ++.++.. +.....           +.+|+
T Consensus        81 ~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~~~~~~-----~~~~~~~~~~~~~~-----------~k~k~  144 (217)
T 3m1y_A           81 LELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSNTLIVE-----NDALNGLVTGHMMF-----------SHSKG  144 (217)
T ss_dssp             HHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEEE-----TTEEEEEEEESCCS-----------TTHHH
T ss_pred             HHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccceeEEe-----CCEEEeeeccCCCC-----------CCChH
Confidence            999999999999999999999999999999999998888877641     2332221 111112           33499


Q ss_pred             HHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          156 FVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       156 ~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                      .+++.+++++|++++++++|||+.||+.+|+++|.
T Consensus       145 ~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~  179 (217)
T 3m1y_A          145 EMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHI  179 (217)
T ss_dssp             HHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSE
T ss_pred             HHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCC
Confidence            99999999999999999999999999999966544

>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A

Probab=99.88  E-value=6.8e-22  Score=160.85  Aligned_cols=197  Identities=15%  Similarity=0.114  Sum_probs=132.5

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHH---H----------HHccC--ChhHHHH-HHHHHHHhCCC--
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFN---Q----------LRSTL--PWNSLMD-RMMKELHSQGK--   58 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~---~----------~~~~~--~~~~~~~-~~~~~~~~~~~--   58 (265)
                      ++|+|+||+||||+++...     ..+++++|.+....   .          .+...  ....... .+...+...+.  
T Consensus         6 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (238)
T 3ed5_A            6 RYRTLLFDVDDTILDFQAAEALALRLLFEDQNIPLTNDMKAQYKTINQGLWRAFEEGKMTRDEVVNTRFSALLKEYGYEA   85 (238)
T ss_dssp             CCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHTTCCC
T ss_pred             cCCEEEEcCcCcCcCCchhHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHcCCCC
Confidence            4799999999999998642     34566666542110   0          00011  1111111 11122222222  


Q ss_pred             CHHHH----HHHh-cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           59 TVEDI----ANCL-RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        59 ~~~~~----~~~~-~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ....+    .... ....++||+.++|+.|+++ ++++++||+....+...++.+|+..+|+.+++.+            
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~------------  152 (238)
T 3ed5_A           86 DGALLEQKYRRFLEEGHQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFKDIFVSE------------  152 (238)
T ss_dssp             CHHHHHHHHHHHHTTCCCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCSEEEEGG------------
T ss_pred             cHHHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhheEEEec------------
Confidence            11222    2222 2467899999999999999 9999999999999999999999999999888752            


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcC-CCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCC
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFG-CGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPM  211 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~g-i~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (265)
                        .....||           |+.+++.+++++| ++++++++|||+. ||+.+|+++|...+.+..+ ..... .   ..
T Consensus       153 --~~~~~kp-----------~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~i~~~~~-~~~~~-~---~~  214 (238)
T 3ed5_A          153 --DTGFQKP-----------MKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDTCWMNPD-MKPNV-P---EI  214 (238)
T ss_dssp             --GTTSCTT-----------CHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTT-CCCCT-T---CC
T ss_pred             --ccCCCCC-----------ChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEEEEECCC-CCCCc-c---cC
Confidence              1223455           8999999999999 9999999999998 9999999887766665443 21111 1   11


Q ss_pred             eeeEEEEeCCCHHHHHHHHHH
Q 044617          212 LIKAKVHEWSSAEELKKILLH  232 (265)
Q Consensus       212 ~~~~~~~~~~~~~el~~~l~~  232 (265)
                      .++..+   +++.||.++|.+
T Consensus       215 ~ad~v~---~~~~el~~~l~~  232 (238)
T 3ed5_A          215 IPTYEI---RKLEELYHILNI  232 (238)
T ss_dssp             CCSEEE---SSGGGHHHHHTC
T ss_pred             CCCeEE---CCHHHHHHHHHh
Confidence            344556   899998887653

>3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A*

Probab=99.88  E-value=1.2e-22  Score=170.50  Aligned_cols=205  Identities=10%  Similarity=0.019  Sum_probs=132.5

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHH-----hCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHh-----
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQ-----MGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCL-----   67 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----   67 (265)
                      +|+|+||+||||+++...     ..++..     .+........+....+..+...+.......+...+.+...+     
T Consensus        57 ~k~i~FDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (282)
T 3nuq_A           57 LKVFFFDIDNCLYKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGLVMFHKVNALEYNRLVDDSLP  136 (282)
T ss_dssp             CCEEEECCTTTTSCCCHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHTTTSC
T ss_pred             CCEEEEecCCCcccCCccHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHhhhhh
Confidence            589999999999998642     122222     13322111111000001111111122223344544444333     


Q ss_pred             --cCCCCChhHHHHHHHHHHcCC--cEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617           68 --RQCPLDSHVAAAIKSAHSLGC--DLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        68 --~~~~~~~g~~e~l~~l~~~g~--~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                        ....++||+.++|+.|+++|+  +++|+||+....+...++.+|+..+|+.+++.+...          ......|| 
T Consensus       137 ~~~~~~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~v~~~~~~~----------~~~~~~Kp-  205 (282)
T 3nuq_A          137 LQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDGLTYCDYSR----------TDTLVCKP-  205 (282)
T ss_dssp             GGGTCCCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSEEECCCCSS----------CSSCCCTT-
T ss_pred             hhhccCcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccceEEEeccCC----------CcccCCCc-
Confidence              236789999999999999999  999999999999999999999999999988752110          01122345 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCC-ceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGK-QRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~-~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                                |+.+++.+++++|+++ +++++|||+.||+.||+++|...+++...+..... ... ...++..+   ++
T Consensus       206 ----------~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~~~~~~~~~~-~~~-~~~ad~vi---~s  270 (282)
T 3nuq_A          206 ----------HVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIHLVENEVNEI-LGQ-TPEGAIVI---SD  270 (282)
T ss_dssp             ----------SHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEEECSCCC-----CC-CCTTCEEE---SS
T ss_pred             ----------CHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEEEcCCccccc-ccc-CCCCCEEe---CC
Confidence                      8999999999999998 99999999999999999988755555544332211 111 11234555   88


Q ss_pred             HHHHHHHHHHH
Q 044617          223 AEELKKILLHL  233 (265)
Q Consensus       223 ~~el~~~l~~~  233 (265)
                      +.||.++|.++
T Consensus       271 l~el~~~l~~l  281 (282)
T 3nuq_A          271 ILELPHVVSDL  281 (282)
T ss_dssp             GGGGGGTSGGG
T ss_pred             HHHHHHHhhhh
Confidence            98888776543

>1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A

Probab=99.88  E-value=8.7e-23  Score=165.58  Aligned_cols=203  Identities=13%  Similarity=0.156  Sum_probs=127.1

Q ss_pred             CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHcc-----CChhHHHHHHHHHHHhCCCCHHHHHHHhc--CCCCCh
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRST-----LPWNSLMDRMMKELHSQGKTVEDIANCLR--QCPLDS   74 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~   74 (265)
                      ++++|+|||||||+|+.....+++.+|.+.........     ..+..........   .....+.+.+.+.  ...++|
T Consensus        13 ~~k~viFD~DGTLvd~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   89 (225)
T 1nnl_A           13 SADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLAL---IQPSREQVQRLIAEQPPHLTP   89 (225)
T ss_dssp             HCSEEEEETBTTTBSSCHHHHHHHHTTCTTTC------------CHHHHHHHHHHH---HCCCHHHHHHHHHHSCCCBCT
T ss_pred             hCCEEEEeCcccccccccHHHHHHHhCCcHHHHHHHHHHHcCCccHHHHHHHHHHH---hcCCHHHHHHHHHhccCCCCc
Confidence            36899999999999999888888888875321111111     1222222221111   1223344444433  467899


Q ss_pred             hHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc--ccceEEecCceecCCCceEEeeccccccCCCcccccCCCC
Q 044617           75 HVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG--CFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNL  152 (265)
Q Consensus        75 g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~--~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~  152 (265)
                      |+.++|+.|+++|++++|+||+....++.+++.+|+..  +|+.++.    ++.++.+......    .+    . ....
T Consensus        90 g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~----~~~~~~~~~~~~~----~~----~-~~~~  156 (225)
T 1nnl_A           90 GIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLK----FYFNGEYAGFDET----QP----T-AESG  156 (225)
T ss_dssp             THHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEE----ECTTSCEEEECTT----SG----G-GSTT
T ss_pred             cHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEE----EcCCCcEecCCCC----Cc----c-cCCC
Confidence            99999999999999999999999999999999999873  6655432    2222222211110    00    0 0012


Q ss_pred             chHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHH
Q 044617          153 CKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILL  231 (265)
Q Consensus       153 ~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~  231 (265)
                      +||..++.+++++|+  +++++|||+.+|+.+|+++|. .+.+... .. ......   .++..+   +++.||.++|.
T Consensus       157 ~Kp~~~~~~~~~~~~--~~~~~vGDs~~Di~~a~~ag~-~i~~~~~-~~-~~~~~~---~~~~~~---~~~~el~~~l~  224 (225)
T 1nnl_A          157 GKGKVIKLLKEKFHF--KKIIMIGDGATDMEACPPADA-FIGFGGN-VI-RQQVKD---NAKWYI---TDFVELLGELE  224 (225)
T ss_dssp             HHHHHHHHHHHHHCC--SCEEEEESSHHHHTTTTTSSE-EEEECSS-CC-CHHHHH---HCSEEE---SCGGGGCC---
T ss_pred             chHHHHHHHHHHcCC--CcEEEEeCcHHhHHHHHhCCe-EEEecCc-cc-cHHHHh---cCCeee---cCHHHHHHHHh
Confidence            499999999999998  789999999999999988776 4444221 11 111211   234555   88888776553

>2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6

Probab=99.88  E-value=2e-22  Score=165.72  Aligned_cols=196  Identities=16%  Similarity=0.184  Sum_probs=129.6

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchH----HHHHHHccCChhHHHHHHHHHHH---hCCCCHHHH------
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTH----LFNQLRSTLPWNSLMDRMMKELH---SQGKTVEDI------   63 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~------   63 (265)
                      ++++|+||+||||+|+...     ..+++.+|.+.    .+.. +...++............   ..+...+.+      
T Consensus        22 ~~k~iiFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (243)
T 2hsz_A           22 QFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMT-WIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKRQ  100 (243)
T ss_dssp             SCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHH-HCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHH
T ss_pred             cCCEEEEcCCCcCCCCHHHHHHHHHHHHHHcCCCCCCHHHHHH-HhCchHHHHHHHHhhhhhccccccCCHHHHHHHHHH
Confidence            4689999999999999642     34556666542    1111 112222222222221110   112222111      


Q ss_pred             -HH-----HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccc
Q 044617           64 -AN-----CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHD  137 (265)
Q Consensus        64 -~~-----~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~  137 (265)
                       .+     ......++||+.++|+.|+++|++++|+||+....+..+++.+|+..+|+.+++.+.              .
T Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~~--------------~  166 (243)
T 2hsz_A          101 FGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQS--------------L  166 (243)
T ss_dssp             HHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTTT--------------S
T ss_pred             HHHHHHHhccccCccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEEEEEeccc--------------C
Confidence             11     123457789999999999999999999999999999999999999999998887421              1


Q ss_pred             cccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCch-hhhhhcCCCeeeEE
Q 044617          138 STLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPL-WDRICSNPMLIKAK  216 (265)
Q Consensus       138 ~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  216 (265)
                      ...||           ++..+..+++++|++++++++|||+.||+.+|+++|...+.+.. ++.. ......   .++..
T Consensus       167 ~~~Kp-----------~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~---~ad~v  231 (243)
T 2hsz_A          167 PEIKP-----------HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTY-GYNYNIPIAQS---KPDWI  231 (243)
T ss_dssp             SSCTT-----------SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESS-SCSTTCCGGGG---CCSEE
T ss_pred             CCCCc-----------CHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEEEcC-CCCchhhhhhC---CCCEE
Confidence            12345           78999999999999999999999999999999887765555543 3321 111111   23455


Q ss_pred             EEeCCCHHHHHHHH
Q 044617          217 VHEWSSAEELKKIL  230 (265)
Q Consensus       217 ~~~~~~~~el~~~l  230 (265)
                      +   +++.||.+++
T Consensus       232 i---~~~~el~~~l  242 (243)
T 2hsz_A          232 F---DDFADILKIT  242 (243)
T ss_dssp             E---SSGGGGGGGT
T ss_pred             E---CCHHHHHHHh
Confidence            5   7888876543

>2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A

Probab=99.88  E-value=7.2e-22  Score=164.20  Aligned_cols=134  Identities=15%  Similarity=0.138  Sum_probs=104.6

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ....++||+.++|+.|++ +++++|+||+....+...++.+|+..+|+.+++..              .....||     
T Consensus       118 ~~~~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~~i~~~~--------------~~~~~KP-----  177 (260)
T 2gfh_A          118 QHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIGG--------------EQKEEKP-----  177 (260)
T ss_dssp             HTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEGG--------------GSSSCTT-----
T ss_pred             hcCCCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhheEEecC--------------CCCCCCC-----
Confidence            357889999999999998 59999999999999999999999999999988752              1123456     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCC-CCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRD-CDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                            ++..+..+++++|++|+++++|||+ .+|+.+|+++|+ ..+++.. +.......   ...++..+   +++.|
T Consensus       178 ------~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~~-~~~~~~~~---~~~~~~~i---~~~~e  244 (260)
T 2gfh_A          178 ------APSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINK-SGRVPLTS---SPMPHYMV---SSVLE  244 (260)
T ss_dssp             ------CHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECT-TCCCCSSC---CCCCSEEE---SSGGG
T ss_pred             ------CHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEcC-CCCCcCcc---cCCCCEEE---CCHHH
Confidence                  8999999999999999999999995 999999999887 4555543 22211101   11234555   88999


Q ss_pred             HHHHHHHHH
Q 044617          226 LKKILLHLI  234 (265)
Q Consensus       226 l~~~l~~~~  234 (265)
                      |.++|.++.
T Consensus       245 l~~~l~~~~  253 (260)
T 2gfh_A          245 LPALLQSID  253 (260)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            988887653

>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A

Probab=99.88  E-value=2.6e-22  Score=163.23  Aligned_cols=135  Identities=13%  Similarity=0.154  Sum_probs=104.4

Q ss_pred             hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           67 LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        67 ~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      +....++||+.++|+.|+++|++++++||+....+...++.+|+..+|+.+++.+              .....||    
T Consensus        91 ~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp----  152 (232)
T 1zrn_A           91 YLRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSVD--------------PVQVYKP----  152 (232)
T ss_dssp             GGGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEESG--------------GGTCCTT----
T ss_pred             HccCCCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhheEEEec--------------ccCCCCC----
Confidence            3456789999999999999999999999999999999999999999999888752              1122355    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                             ++..++.+++++|++++++++|||+.||+.+|+++|...+.+...+.. ...+.   ..++..+   +++.||
T Consensus       153 -------~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~-~~~~~---~~~~~~~---~~~~el  218 (232)
T 1zrn_A          153 -------DNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNV-FEEMG---QTPDWEV---TSLRAV  218 (232)
T ss_dssp             -------SHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCC-CCSSS---CCCSEEE---SSHHHH
T ss_pred             -------CHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcCCCCC-ccccC---CCCCEEE---CCHHHH
Confidence                   899999999999999999999999999999999888765555443222 11111   1234555   899999


Q ss_pred             HHHHHHH
Q 044617          227 KKILLHL  233 (265)
Q Consensus       227 ~~~l~~~  233 (265)
                      .++|.+.
T Consensus       219 ~~~l~~~  225 (232)
T 1zrn_A          219 VELFETA  225 (232)
T ss_dssp             HTTC---
T ss_pred             HHHHHhh
Confidence            8877654

>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}

Probab=99.88  E-value=1.9e-22  Score=159.84  Aligned_cols=175  Identities=14%  Similarity=0.176  Sum_probs=123.6

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI   80 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l   80 (265)
                      |.+++|+||+||||++....               .+..                      ..........++||+.++|
T Consensus         1 m~ik~vifD~DgtL~~~~~~---------------~y~~----------------------~~~~~~~~~~~~~g~~~~L   43 (189)
T 3ib6_A            1 MSLTHVIWDMGETLNTVPNT---------------RYDH----------------------HPLDTYPEVVLRKNAKETL   43 (189)
T ss_dssp             --CCEEEECTBTTTBCCCTT---------------SSCS----------------------SCGGGCTTCCBCTTHHHHH
T ss_pred             CCceEEEEcCCCceeeccch---------------hhhh----------------------HHHhccCCceeCcCHHHHH
Confidence            77899999999999885320               0000                      0001123578999999999


Q ss_pred             HHHHHcCCcEEEEeCCCH---HHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHH
Q 044617           81 KSAHSLGCDLKIVSDANQ---FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFV  157 (265)
Q Consensus        81 ~~l~~~g~~~~ivS~~~~---~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~  157 (265)
                      +.|+++|++++|+||+..   ..+...++.+|+..+|+.+++....+.          .....||           ++..
T Consensus        44 ~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~i~~~~~~~~----------~~~~~KP-----------~p~~  102 (189)
T 3ib6_A           44 EKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQ----------PGKMEKP-----------DKTI  102 (189)
T ss_dssp             HHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEEEEECCTTSS----------TTCCCTT-----------SHHH
T ss_pred             HHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEEEEEcccccc----------ccCCCCc-----------CHHH
Confidence            999999999999999987   889999999999999999988632111          0023456           8899


Q ss_pred             HHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchh-hhhhcCCCeeeEEEEeCCCHHHHHHHHHHHHH
Q 044617          158 LDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLW-DRICSNPMLIKAKVHEWSSAEELKKILLHLIG  235 (265)
Q Consensus       158 i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~  235 (265)
                      ++.+++++|++++++++|||+ .+|+.+|+++|+..+.+.+.+.... ..+..  ..++..+.. .++.||.++|+-...
T Consensus       103 ~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~~~~--~~~~~v~~~-~~l~~l~~~l~l~~~  179 (189)
T 3ib6_A          103 FDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPL--VAPPFVIPV-WDLADVPEALLLLKK  179 (189)
T ss_dssp             HHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEEEECCTTTCBCSSCCCB--CSSSCEEEE-SSGGGHHHHHHHHHH
T ss_pred             HHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEEEECCcccccccccccc--CCCcceecc-ccHHhHHHHHHHHHH
Confidence            999999999999999999999 7999999998887777766543211 11111  123444520 267777776655443


Q ss_pred             h
Q 044617          236 A  236 (265)
Q Consensus       236 ~  236 (265)
                      .
T Consensus       180 ~  180 (189)
T 3ib6_A          180 I  180 (189)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas}

Probab=99.87  E-value=5.1e-22  Score=161.49  Aligned_cols=202  Identities=14%  Similarity=0.102  Sum_probs=130.8

Q ss_pred             CceEEEEecCCCCCCCCc-----hHHHHHHhCchHHHHHH---Hc-----------cCChhHHHHHHHH-HHHhCCC--C
Q 044617            2 ADVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHLFNQL---RS-----------TLPWNSLMDRMMK-ELHSQGK--T   59 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~~~~~---~~-----------~~~~~~~~~~~~~-~~~~~~~--~   59 (265)
                      ++|+|+||+||||+++..     ...++++.|.+.....+   +.           ...+......... .....+.  .
T Consensus         5 ~~k~i~fD~DGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (240)
T 3smv_A            5 DFKALTFDCYGTLIDWETGIVNALQPLAKRTGKTFTSDELLEVFGRNESPQQTETPGALYQDILRAVYDRIAKEWGLEPD   84 (240)
T ss_dssp             GCSEEEECCBTTTBCHHHHHHHHTHHHHHHHTCCCCHHHHHHHHHHHHGGGCCSSCCSCHHHHHHHHHHHHHHHTTCCCC
T ss_pred             cceEEEEeCCCcCcCCchhHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhCCCCChhHHHHHHHHHHHHHhCCCCC
Confidence            379999999999999864     24556666654211111   10           0112222222222 2222232  2


Q ss_pred             HHH---HHHHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeecc
Q 044617           60 VED---IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYH  136 (265)
Q Consensus        60 ~~~---~~~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~  136 (265)
                      .+.   +........++|++.++|+.|++ |++++++||+....+...++.  +..+|+.+++..              .
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~--l~~~fd~i~~~~--------------~  147 (240)
T 3smv_A           85 AAEREEFGTSVKNWPAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAK--LGVEFDHIITAQ--------------D  147 (240)
T ss_dssp             HHHHHHHHTGGGGCCBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTT--TCSCCSEEEEHH--------------H
T ss_pred             HHHHHHHHHHHhcCCCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHh--cCCccCEEEEcc--------------c
Confidence            222   22333456889999999999999 799999999999988888877  457788888752              1


Q ss_pred             ccccCCCcccccCCCCchHHHHHHH---HHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecC----CCchhhhhhc
Q 044617          137 DSTLSHHGCNLCPSNLCKGFVLDHV---CTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRK----NYPLWDRICS  208 (265)
Q Consensus       137 ~~~~kp~~~~~~~~~~~K~~~i~~~---~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~----~~~~~~~~~~  208 (265)
                      ....||           ++..+..+   ++++|++|+++++|||+. ||+.+|+++|...+.+.+.    |++.... ..
T Consensus       148 ~~~~KP-----------~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~~~~~~~~g~g~~~~-~~  215 (240)
T 3smv_A          148 VGSYKP-----------NPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWIYRRHGKEGYGATHV-PS  215 (240)
T ss_dssp             HTSCTT-----------SHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEECTTCC-------CC-CS
T ss_pred             cCCCCC-----------CHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEEcCCCcccCCCCCCC-Cc
Confidence            223455           77877777   899999999999999996 9999999877765555432    2221110 00


Q ss_pred             CCCeeeEEEEeCCCHHHHHHHHHHHHH
Q 044617          209 NPMLIKAKVHEWSSAEELKKILLHLIG  235 (265)
Q Consensus       209 ~~~~~~~~~~~~~~~~el~~~l~~~~~  235 (265)
                      ....++..+   +++.||.++|.++++
T Consensus       216 ~~~~ad~v~---~~~~el~~~l~~~l~  239 (240)
T 3smv_A          216 RMPNVDFRF---NSMGEMAEAHKQALK  239 (240)
T ss_dssp             SCCCCSEEE---SSHHHHHHHHHHHHH
T ss_pred             CCCCCCEEe---CCHHHHHHHHHHHhc
Confidence            112345556   999999999988754

>2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A

Probab=99.87  E-value=4.7e-22  Score=158.47  Aligned_cols=194  Identities=15%  Similarity=0.176  Sum_probs=126.5

Q ss_pred             eEEEEecCCCCCCCCchHHHHHHhCchHHHHH-HHcc-CChhHHHHHHHHH-HHhCC--CCHHHHHHHhcCCCCChhHHH
Q 044617            4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQ-LRST-LPWNSLMDRMMKE-LHSQG--KTVEDIANCLRQCPLDSHVAA   78 (265)
Q Consensus         4 k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~g~~e   78 (265)
                      |+|+|||||||+|+......+...+....... .... ..+.......... +...+  ...+.+.+.+....++||+.+
T Consensus         2 k~iiFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (201)
T 2w43_A            2 IILAFDIFGTVLDTSTVIQEFRNKQLEYTWLLTIMGKYVEFEEITKITLRYILKVRGEESKFDEELNKWKNLKAYEDTKY   81 (201)
T ss_dssp             CEEEECCBTTTEEGGGSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHTCEECGGGGG
T ss_pred             cEEEEeCCCceecchhHHHHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhCChHHHHHHHHhhcccccCCChHH
Confidence            78999999999998753221222121111100 0011 1111111111111 11111  112333444456788999999


Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                       |+.|+++ ++++|+||+....+...++.+|+..+|+.+++.+              .....||           ++..+
T Consensus        82 -l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~Kp-----------~~~~~  134 (201)
T 2w43_A           82 -LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKGIFSAE--------------SVKEYKP-----------SPKVY  134 (201)
T ss_dssp             -HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGG--------------GGTCCTT-----------CHHHH
T ss_pred             -HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcEEEehh--------------hcCCCCC-----------CHHHH
Confidence             9999999 9999999999999999999999999999888752              1122355           79999


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      ..+++++|  ++++++|||+.+|+.+|+++|...+.+...+... ..+.   ..++..+   +++.||.++|.++
T Consensus       135 ~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~~~~~~-~~~~---~~~~~~~---~~~~el~~~l~~~  200 (201)
T 2w43_A          135 KYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNRKNTIV-DPIG---GKPDVIV---NDFKELYEWILRY  200 (201)
T ss_dssp             HHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECSSSCCC-CTTS---CCCSEEE---SSHHHHHHHHHHH
T ss_pred             HHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECCCCCCc-cccC---CCCCEEE---CCHHHHHHHHHhc
Confidence            99999999  8999999999999999998877655555433221 1111   1234555   8999998887654

>3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens}

Probab=99.87  E-value=1.4e-22  Score=166.89  Aligned_cols=198  Identities=11%  Similarity=0.100  Sum_probs=130.1

Q ss_pred             CceEEEEecCCCCCCCCc-----hHHHHHHhCchHHHHHH--HccCChhHHHHHHHHHHHhCCCCHHH--------HHHH
Q 044617            2 ADVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHLFNQL--RSTLPWNSLMDRMMKELHSQGKTVED--------IANC   66 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~   66 (265)
                      ++|+|+||+||||+++..     ...+++++|.+......  ............+...+. .....+.        +...
T Consensus        29 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  107 (250)
T 3l5k_A           29 PVTHLIFDMDGLLLDTERLYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQ-LPMSKEELVEESQTKLKEV  107 (250)
T ss_dssp             CCSEEEEETBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHTTCCHHHHHHHHHHHHT-CSSCHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEcCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHhcCCCHHHHHHHHHHHhC-CCCCHHHHHHHHHHHHHHH
Confidence            479999999999999854     24455566654211111  111222222222222221 1112111        2233


Q ss_pred             hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-cCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           67 LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        67 ~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                      .....++||+.++|+.|+++|++++|+||+....+...+.. +|+..+|+.+++.+.            ......||   
T Consensus       108 ~~~~~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f~~~~~~~~------------~~~~~~Kp---  172 (250)
T 3l5k_A          108 FPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLGDD------------PEVQHGKP---  172 (250)
T ss_dssp             GGGCCBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTSSCEECTTC------------TTCCSCTT---
T ss_pred             hccCCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhheeeEEecch------------hhccCCCC---
Confidence            34678899999999999999999999999998877776654 588888988877420            01223355   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCC--ceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGK--QRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSA  223 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~--~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (265)
                              ++.+++.+++++|+++  +++++|||+.||+.+|+++|...+.+..++.. .. ..   ..++..+   +++
T Consensus       173 --------~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~~~~-~~-~~---~~ad~v~---~sl  236 (250)
T 3l5k_A          173 --------DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDGNLS-RD-LT---TKATLVL---NSL  236 (250)
T ss_dssp             --------STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCTTSC-GG-GS---TTSSEEC---SCG
T ss_pred             --------ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCCCCc-hh-hc---ccccEee---cCH
Confidence                    8899999999999988  99999999999999999888765666544322 22 22   1234445   788


Q ss_pred             HHHHHHHH
Q 044617          224 EELKKILL  231 (265)
Q Consensus       224 ~el~~~l~  231 (265)
                      .||...|.
T Consensus       237 ~el~~~l~  244 (250)
T 3l5k_A          237 QDFQPELF  244 (250)
T ss_dssp             GGCCGGGG
T ss_pred             HHhhHHHh
Confidence            88765543

>3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1}

Probab=99.87  E-value=3.8e-22  Score=158.71  Aligned_cols=166  Identities=13%  Similarity=0.061  Sum_probs=116.8

Q ss_pred             CCceEEEEecCCCCCCCCch----HHHHHHhCchHHHHHHHc--------c--CChhHHHHHHHHHHHhCC--CCHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSD----NWVVTQMGLTHLFNQLRS--------T--LPWNSLMDRMMKELHSQG--KTVEDIA   64 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~----~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~~--~~~~~~~   64 (265)
                      |++++|+|||||||+|+...    ..+++.+|.+........        .  ..........   ....+  ...+.+.
T Consensus         2 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~   78 (200)
T 3cnh_A            2 MTIKALFWDIGGVLLTNGWDREQRADVAQRFGLDTDDFTERHRLAAPELELGRMTLAEYLEQV---VFYQPRDFTPEDFR   78 (200)
T ss_dssp             CCCCEEEECCBTTTBCCSSCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHTTSSCHHHHHHHH---TTTSCCSSCHHHHH
T ss_pred             CCceEEEEeCCCeeECCCcchHHHHHHHHHcCCCHHHHHHHHHhhchHHHcCCcCHHHHHHHH---HHHcCCCCCHHHHH
Confidence            77899999999999998642    345556665432111110        0  1111111111   11111  2233333


Q ss_pred             HH-hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617           65 NC-LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        65 ~~-~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      +. .....++||+.++|+.|+++| +++|+||+....+...++.+|+..+|+.+++..              .....|| 
T Consensus        79 ~~~~~~~~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~~~~~~--------------~~~~~Kp-  142 (200)
T 3cnh_A           79 AVMEEQSQPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLAFFTSS--------------ALGVMKP-  142 (200)
T ss_dssp             HHHHHTCCBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSCEEEHH--------------HHSCCTT-
T ss_pred             HHHHhcCccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcceEEeec--------------ccCCCCC-
Confidence            32 345678999999999999999 999999999999999999999999998888741              1122355 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeee
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVM  195 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~  195 (265)
                                ++..++.+++++|++++++++|||+.+|+.+|+++|...+.+
T Consensus       143 ----------~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~  184 (200)
T 3cnh_A          143 ----------NPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC  184 (200)
T ss_dssp             ----------CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred             ----------CHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence                      789999999999999999999999999999998877643333

>2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6

Probab=99.87  E-value=8e-23  Score=163.73  Aligned_cols=189  Identities=13%  Similarity=0.102  Sum_probs=125.6

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHcc--CChhHHHHHHHHHHHhCCCCH-------HHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRST--LPWNSLMDRMMKELHSQGKTV-------EDIANC   66 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~   66 (265)
                      ||+|+|+||+||||+|+...     ..+++++|...........  .........       .+...       ..+...
T Consensus         2 M~~k~iifDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~   74 (209)
T 2hdo_A            2 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAMTE-------LGIAASEFDHFQAQYEDV   74 (209)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHHHH-------TTCCGGGHHHHHHHHHHH
T ss_pred             CcccEEEEcCCCCCcCCHHHHHHHHHHHHHHhCCCCCHHHHHHHcCCcHHHHHHH-------cCCCHHHHHHHHHHHHHH
Confidence            77899999999999999642     3344555543211111111  111111111       11110       011111


Q ss_pred             ----hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCC
Q 044617           67 ----LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        67 ----~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                          .....++||+.++|+.|+++ ++++|+||+....++..++.+|+..+|+.+++.+              .....||
T Consensus        75 ~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~KP  139 (209)
T 2hdo_A           75 MASHYDQIELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRMAVTISAD--------------DTPKRKP  139 (209)
T ss_dssp             HTTCGGGCEECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGG--------------GSSCCTT
T ss_pred             HhhhcccCCcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhccEEEecC--------------cCCCCCC
Confidence                13467899999999999999 9999999999999999999999999998888752              1122344


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                                 ++..++.+++++|++++++++|||+.||+.+|+++|... ++..+++.....+..    ++..+   .+
T Consensus       140 -----------~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~-~~~~~~~~~~~~~~~----a~~~~---~~  200 (209)
T 2hdo_A          140 -----------DPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDF-GLAVWGMDPNADHQK----VAHRF---QK  200 (209)
T ss_dssp             -----------SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE-EEEGGGCCTTGGGSC----CSEEE---SS
T ss_pred             -----------CcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeE-EEEcCCCCChhhhcc----CCEEe---CC
Confidence                       689999999999999999999999999999998877643 333444332222221    34455   77


Q ss_pred             HHHHHHHH
Q 044617          223 AEELKKIL  230 (265)
Q Consensus       223 ~~el~~~l  230 (265)
                      +.||.++|
T Consensus       201 ~~el~~~l  208 (209)
T 2hdo_A          201 PLDILELF  208 (209)
T ss_dssp             GGGGGGGC
T ss_pred             HHHHHHhh
Confidence            88876543

>1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A

Probab=99.86  E-value=2e-21  Score=161.38  Aligned_cols=136  Identities=14%  Similarity=0.116  Sum_probs=101.9

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc-ceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF-SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f-~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      ....++|++.++++.|+++|++++++||+....+...++.+|+..+| +.+++.+              .....||    
T Consensus       100 ~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~~--------------~~~~~kp----  161 (267)
T 1swv_A          100 RYASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTPD--------------DVPAGRP----  161 (267)
T ss_dssp             GGCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCGG--------------GSSCCTT----
T ss_pred             cccccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChHheecCC--------------ccCCCCC----
Confidence            34677899999999999999999999999999999999988887775 6555531              1112234    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCC-ceEEEEcCCCCCcccccCCCCCCeeeecCCCch----------------------h
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGK-QRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPL----------------------W  203 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~-~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~----------------------~  203 (265)
                             |+.++..+++++|+++ +++++|||+.||+.|++.+|...+.++.++...                      .
T Consensus       162 -------~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T 1swv_A          162 -------YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVR  234 (267)
T ss_dssp             -------SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHH
T ss_pred             -------CHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCCCCccCccHHHHhhchhhhhhhhhhhHH
Confidence                   8999999999999999 999999999999999988776556665443210                      1


Q ss_pred             hhhhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          204 DRICSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      ..+...  .++..+   +++.||.++|..+
T Consensus       235 ~~~~~~--~ad~v~---~~~~el~~~l~~~  259 (267)
T 1swv_A          235 NRFVEN--GAHFTI---ETMQELESVMEHI  259 (267)
T ss_dssp             HHHHHT--TCSEEE---SSGGGHHHHHHHH
T ss_pred             HHHHhc--CCceec---cCHHHHHHHHHHH
Confidence            112111  134555   8899998888665

>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}

Probab=99.86  E-value=1.2e-21  Score=157.69  Aligned_cols=198  Identities=15%  Similarity=0.100  Sum_probs=124.6

Q ss_pred             CCceEEEEecCCCCCCCCc-----hHHHHHHhCchHH-HHHHHcc--CChhHHHHHHHHHHHhCCCCH-----------H
Q 044617            1 MADVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHL-FNQLRST--LPWNSLMDRMMKELHSQGKTV-----------E   61 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----------~   61 (265)
                      |++|+|+||+||||+++..     ...++++++.+.. ...+...  ..+.......    .... ..           .
T Consensus         4 M~~k~v~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~   78 (225)
T 3d6j_A            4 MKYTVYLFDFDYTLADSSRGIVTCFRSVLERHGYTGITDDMIKRTIGKTLEESFSIL----TGIT-DADQLESFRQEYSK   78 (225)
T ss_dssp             -CCSEEEECCBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHTTTTSCHHHHHHHH----HCCC-CHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCCCCCHHHHHHHHHHHHHHhCCCCCCHHHHHHHhCCcHHHHHHHH----cCCC-CHHHHHHHHHHHHH
Confidence            6679999999999999864     2345555555421 1111111  1111111111    1000 10           1


Q ss_pred             HHHHH-hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeecccccc
Q 044617           62 DIANC-LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTL  140 (265)
Q Consensus        62 ~~~~~-~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~  140 (265)
                      ..... .....++|++.++++.++++|++++++|++....+...++.+++..+|+.+++.+.              ....
T Consensus        79 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~  144 (225)
T 3d6j_A           79 EADIYMNANTILFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFDIIIGGED--------------VTHH  144 (225)
T ss_dssp             HHHHHTGGGCEECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCSEEECGGG--------------CSSC
T ss_pred             HHHHhccccCccCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhheeeeeehhh--------------cCCC
Confidence            11111 13456789999999999999999999999999999999999999888888777421              1112


Q ss_pred             CCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeC
Q 044617          141 SHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEW  220 (265)
Q Consensus       141 kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (265)
                      ||           |+..+..+++++|++++++++|||+.||+.|++.+|...+.+. ++......+...  .++..+   
T Consensus       145 k~-----------~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~~~-~~~~~~~~l~~~--~ad~v~---  207 (225)
T 3d6j_A          145 KP-----------DPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTGVT-SGMTTAQEFQAY--PYDRII---  207 (225)
T ss_dssp             TT-----------STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEET-TSSCCTTGGGGS--CCSEEE---
T ss_pred             CC-----------ChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEEEC-CCCCChHHHhhc--CCCEEE---
Confidence            34           7899999999999999999999999999999988666444443 333222223211  134455   


Q ss_pred             CCHHHHHHHHHHHH
Q 044617          221 SSAEELKKILLHLI  234 (265)
Q Consensus       221 ~~~~el~~~l~~~~  234 (265)
                      .++.||.++|+.+.
T Consensus       208 ~~~~el~~~l~~~~  221 (225)
T 3d6j_A          208 STLGQLISVPEDKS  221 (225)
T ss_dssp             SSGGGGC-------
T ss_pred             CCHHHHHHhhhhhc
Confidence            88889888876654

>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}

Probab=99.86  E-value=6.3e-22  Score=160.19  Aligned_cols=192  Identities=14%  Similarity=0.129  Sum_probs=123.1

Q ss_pred             CCceEEEEecCCCCCCCCc-----hHHHHHHhCchHH---H-HHHH---ccCC-hhHH------HHHHHHHHHhCCCCHH
Q 044617            1 MADVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHL---F-NQLR---STLP-WNSL------MDRMMKELHSQGKTVE   61 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~---~-~~~~---~~~~-~~~~------~~~~~~~~~~~~~~~~   61 (265)
                      |++++|+||+||||+|+..     ...++...|.+..   + ..+.   .... |...      ...+...+. .....+
T Consensus         1 M~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~   79 (220)
T 2zg6_A            1 MKYKAVLVDFGNTLVGFKPVFYEKVYQVLKDNGYDLDLRKVFRAYAKAMGMINYPDEDGLEHVDPKDFLYILG-IYPSER   79 (220)
T ss_dssp             CCCCEEEECSBTTTEEEEETTHHHHHHHHHHTTCCCCHHHHHHHHHHHGGGCCC-----CCCCCHHHHHHHHT-CCCCHH
T ss_pred             CCceEEEEcCCCceecccccHHHHHHHHHHHhCCCCCHHHHHHHHHHHhhhccCCCccccccccHHHHHHHcC-CCCcHH
Confidence            7789999999999999874     2445666665421   1 1111   1111 1110      122222221 111223


Q ss_pred             HHHHHh------cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeec
Q 044617           62 DIANCL------RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPY  135 (265)
Q Consensus        62 ~~~~~~------~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~  135 (265)
                      ....+.      ....++||+.++|+.|+++|++++|+||+.. .+...++.+|+..+|+.+++.+              
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~~~~~~~--------------  144 (220)
T 2zg6_A           80 LVKELKEADIRDGEAFLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFDALALSY--------------  144 (220)
T ss_dssp             HHHHHHHTTTTCEEEEECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCSEEC-----------------
T ss_pred             HHHHHHHHhhcccCceECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHeeEEEecc--------------
Confidence            222222      1346789999999999999999999999976 5888999999999999888752              


Q ss_pred             cccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCC-CcccccCCCCCCeeeecCCCchhhhhhcCCCeee
Q 044617          136 HDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRG-DFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIK  214 (265)
Q Consensus       136 ~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~-Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (265)
                      .....||           ++..+..+++++|++|   ++|||+.+ |+.+|+++|...+.+..++..  .      .. +
T Consensus       145 ~~~~~Kp-----------~~~~~~~~~~~~~~~~---~~vgD~~~~Di~~a~~aG~~~i~v~~~~~~--~------~~-~  201 (220)
T 2zg6_A          145 EIKAVKP-----------NPKIFGFALAKVGYPA---VHVGDIYELDYIGAKRSYVDPILLDRYDFY--P------DV-R  201 (220)
T ss_dssp             -------------------CCHHHHHHHHHCSSE---EEEESSCCCCCCCSSSCSEEEEEBCTTSCC--T------TC-C
T ss_pred             ccCCCCC-----------CHHHHHHHHHHcCCCe---EEEcCCchHhHHHHHHCCCeEEEECCCCCC--C------Cc-c
Confidence            1112345           6789999999999987   99999998 999998887766666544321  1      11 2


Q ss_pred             EEEEeCCCHHHHHHHHHHHH
Q 044617          215 AKVHEWSSAEELKKILLHLI  234 (265)
Q Consensus       215 ~~~~~~~~~~el~~~l~~~~  234 (265)
                      ..+   +++.||.++|.+++
T Consensus       202 ~~i---~~l~el~~~l~~~~  218 (220)
T 2zg6_A          202 DRV---KNLREALQKIEEMN  218 (220)
T ss_dssp             SCB---SSHHHHHHHHHHHC
T ss_pred             eEE---CCHHHHHHHHHHhc
Confidence            223   89999998887653

>3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii}

Probab=99.86  E-value=1.3e-21  Score=160.57  Aligned_cols=199  Identities=12%  Similarity=0.055  Sum_probs=130.8

Q ss_pred             CceEEEEecCCCCCCCCc-----hHHHHHHhCchHHH----HHHH-----------cc----CChhHHHHH-HHHHHHhC
Q 044617            2 ADVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHLF----NQLR-----------ST----LPWNSLMDR-MMKELHSQ   56 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~~----~~~~-----------~~----~~~~~~~~~-~~~~~~~~   56 (265)
                      ++|+|+||+||||+++..     ...+++++|.+...    ..+.           ..    ..+...... +...+...
T Consensus        14 ~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   93 (254)
T 3umg_A           14 NVRAVLFDTFGTVVDWRTGIATAVADYAARHQLEVDAVAFADRWRARYQPSMDAILSGAREFVTLDILHRENLDFVLRES   93 (254)
T ss_dssp             BCCEEEECCBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTHHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHHT
T ss_pred             CceEEEEeCCCceecCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHhHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHh
Confidence            479999999999999854     24555666553211    1111           00    011111111 11122222


Q ss_pred             CC-----CHHHH---HHHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCC
Q 044617           57 GK-----TVEDI---ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQG  128 (265)
Q Consensus        57 ~~-----~~~~~---~~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~  128 (265)
                      +.     ..+..   ...+....++|++.++|+.|++. ++++++||+....+...++.+|+.  |+.+++.+       
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~--f~~~~~~~-------  163 (254)
T 3umg_A           94 GIDPTNHDSGELDELARAWHVLTPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP--WDVIIGSD-------  163 (254)
T ss_dssp             TCCGGGSCHHHHHHHHGGGGSCCBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC--CSCCCCHH-------
T ss_pred             CCCcCcCCHHHHHHHHHHHhhCcCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC--eeEEEEcC-------
Confidence            32     22222   23335678899999999999997 999999999999999999999985  76666531       


Q ss_pred             ceEEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec---CCCchhhh
Q 044617          129 RLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR---KNYPLWDR  205 (265)
Q Consensus       129 ~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~---~~~~~~~~  205 (265)
                             .....||           |+.+++.+++++|++++++++|||+.||+.+|+++|...+.+.+   +|+.....
T Consensus       164 -------~~~~~kp-----------~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~  225 (254)
T 3umg_A          164 -------INRKYKP-----------DPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFILRPVEHGPHQTDD  225 (254)
T ss_dssp             -------HHTCCTT-----------SHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSC
T ss_pred             -------cCCCCCC-----------CHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEEecCCcCCCCcccc
Confidence                   1122345           89999999999999999999999999999999987775555543   33322221


Q ss_pred             hhcCCCeeeEEEEeCCCHHHHHHHHHH
Q 044617          206 ICSNPMLIKAKVHEWSSAEELKKILLH  232 (265)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~el~~~l~~  232 (265)
                      +. ....++..+   +++.||.++|..
T Consensus       226 ~~-~~~~~d~~~---~~~~el~~~l~~  248 (254)
T 3umg_A          226 LA-PTGSWDISA---TDITDLAAQLRA  248 (254)
T ss_dssp             SS-CSSCCSEEE---SSHHHHHHHHHH
T ss_pred             cc-ccCCCceEE---CCHHHHHHHhcC
Confidence            20 012345666   999999988765

>1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6

Probab=99.86  E-value=1.6e-21  Score=157.12  Aligned_cols=196  Identities=17%  Similarity=0.155  Sum_probs=125.9

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHcc-C--ChhHHHHHHHHHHHhCCCCHHHH--------HH
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRST-L--PWNSLMDRMMKELHSQGKTVEDI--------AN   65 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~--------~~   65 (265)
                      |+|+|+||+||||+++...     ..+++++|.+......+.. .  ........+.......+.....+        .+
T Consensus         8 ~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (226)
T 1te2_A            8 QILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAIS   87 (226)
T ss_dssp             CCCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHH
T ss_pred             CCCEEEECCCCCcCcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhCCCHHHHHHHHHHHcCCCccCHHHHHHHHHHHHHH
Confidence            3799999999999998653     3455566654321111111 1  11222222111100001111111        11


Q ss_pred             -HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           66 -CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        66 -~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                       ......++|++.++|+.++++|++++++|++....+...++.+++..+|+.+++..              .....||  
T Consensus        88 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~~~~~~--------------~~~~~kp--  151 (226)
T 1te2_A           88 LVEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAE--------------KLPYSKP--  151 (226)
T ss_dssp             HHHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECT--------------TSSCCTT--
T ss_pred             HHhccCCcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCcEEEecc--------------ccCCCCC--
Confidence             12346788999999999999999999999999999999999999999998887741              1112234  


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                               ++.+++.+++++|++++++++|||+.||+.|++.+|...+.+ .++......+..   .++..+   .++.
T Consensus       152 ---------~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~~~~~~~~~~---~a~~v~---~~~~  215 (226)
T 1te2_A          152 ---------HPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVV-PAPEAQNDPRFV---LANVKL---SSLT  215 (226)
T ss_dssp             ---------STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEEC-CCTTTTTCGGGG---GSSEEC---SCGG
T ss_pred             ---------ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEEE-cCCCCccccccc---ccCeEE---CCHH
Confidence                     789999999999999999999999999999998866543333 333222221221   233444   7787


Q ss_pred             HHHHH
Q 044617          225 ELKKI  229 (265)
Q Consensus       225 el~~~  229 (265)
                      ||.+.
T Consensus       216 el~~~  220 (226)
T 1te2_A          216 ELTAK  220 (226)
T ss_dssp             GCCHH
T ss_pred             HHhHH
Confidence            76553

>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}

Probab=99.86  E-value=1.2e-21  Score=167.23  Aligned_cols=170  Identities=15%  Similarity=0.211  Sum_probs=126.7

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHc-----cCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRS-----TLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVA   77 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   77 (265)
                      +++|+|||||||++++....+...+|.......+..     ...+..........  ..+...+.+........++||+.
T Consensus       108 ~kaviFDlDGTLid~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~l~~~~~~--l~~~~~~~i~~~~~~~~l~pg~~  185 (317)
T 4eze_A          108 NGIIAFDMDSTFIAEEGVDEIARELGMSTQITAITQQAMEGKLDFNASFTRRIGM--LKGTPKAVLNAVCDRMTLSPGLL  185 (317)
T ss_dssp             SCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHHHHT--TTTCBHHHHHHHHHTCCBCTTHH
T ss_pred             CCEEEEcCCCCccCCccHHHHHHHhCCcHHHHHHHHHHhcCCCCHHHHHHHHHHH--hcCCCHHHHHHHHhCCEECcCHH
Confidence            689999999999999988888888887654333221     12333333222111  12455666777777889999999


Q ss_pred             HHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEe-eccccccCCCcccccCCCCchHH
Q 044617           78 AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL-PYHDSTLSHHGCNLCPSNLCKGF  156 (265)
Q Consensus        78 e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~-~~~~~~~kp~~~~~~~~~~~K~~  156 (265)
                      ++|+.|+++|++++|+||+....++.+++.+|+..+|+.++..    + ++.++.. .......||           |+.
T Consensus       186 e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~~l~~----~-dg~~tg~i~~~~~~~kp-----------kp~  249 (317)
T 4eze_A          186 TILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSNTVEI----R-DNVLTDNITLPIMNAAN-----------KKQ  249 (317)
T ss_dssp             HHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEECEEE----E-TTEEEEEECSSCCCHHH-----------HHH
T ss_pred             HHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEEEEEe----e-CCeeeeeEecccCCCCC-----------CHH
Confidence            9999999999999999999999999999999998888776653    2 2333221 111112234           999


Q ss_pred             HHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                      .++.+++++|++++++++|||+.+|+.+|+++|.
T Consensus       250 ~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~  283 (317)
T 4eze_A          250 TLVDLAARLNIATENIIACGDGANDLPMLEHAGT  283 (317)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred             HHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCC
Confidence            9999999999999999999999999999977553

>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.86  E-value=4.3e-21  Score=155.26  Aligned_cols=126  Identities=16%  Similarity=0.183  Sum_probs=98.8

Q ss_pred             CCCCChhHHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLG-CDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g-~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++++.|+++| ++++++||+....+...++.+|+..+|+.+++.                   .||     
T Consensus       103 ~~~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~~~~~~-------------------~kp-----  158 (234)
T 3ddh_A          103 PIELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFDHIEVM-------------------SDK-----  158 (234)
T ss_dssp             CCCBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCSEEEEE-------------------SCC-----
T ss_pred             cCCcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhheeeec-------------------CCC-----
Confidence            4678999999999999999 999999999999999999999999999888763                   134     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeec---CCCchhhhhhcCCCeeeEEEEeCCCH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPR---KNYPLWDRICSNPMLIKAKVHEWSSA  223 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (265)
                            |+.+++.+++++|++|+++++|||+. ||+.+|+++|...+.+..   ++......   ....++..+   +++
T Consensus       159 ------k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~v~~~~~~g~~~~~~---~~~~~d~v~---~~l  226 (234)
T 3ddh_A          159 ------TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVHIPFEVMWKHEVTET---FAHERLKQV---KRL  226 (234)
T ss_dssp             ------SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEECCCCTTCCCC---C---CCCTTEEEC---SSG
T ss_pred             ------CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEEecCCcccccCCccc---ccCCCceec---ccH
Confidence                  89999999999999999999999996 999999887765555432   22222211   111124444   899


Q ss_pred             HHHHHHH
Q 044617          224 EELKKIL  230 (265)
Q Consensus       224 ~el~~~l  230 (265)
                      .||.++|
T Consensus       227 ~el~~~l  233 (234)
T 3ddh_A          227 DDLLSLL  233 (234)
T ss_dssp             GGHHHHC
T ss_pred             HHHHHhc
Confidence            9988764

>2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6

Probab=99.86  E-value=1.9e-22  Score=160.16  Aligned_cols=187  Identities=14%  Similarity=0.143  Sum_probs=122.3

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHH---HHHHHccCChhHHHHHHHHHHHhCCCCHHH---HHH----
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL---FNQLRSTLPWNSLMDRMMKELHSQGKTVED---IAN----   65 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~----   65 (265)
                      ||+|+|+||+||||+++...     ..+++++|....   ................+..   ..+.....   +..    
T Consensus         2 M~~k~i~fDlDGTL~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~   78 (207)
T 2go7_A            2 MQKTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVAE---DRNLDVEVLNQVRAQSLA   78 (207)
T ss_dssp             --CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHHH---HHTCCHHHHHHHHHHHHT
T ss_pred             CcccEEEEeCCCcccccHHHHHHHHHHHHHHcCCCCCHHHHHHHHccccHHHHHHHhhc---hhhccHHHHHHHHHHHHH
Confidence            77899999999999998652     334455554321   1111110112222222210   11111111   111    


Q ss_pred             Hh-cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           66 CL-RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        66 ~~-~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      .+ ....++|++.++++.++++|++++++|++....+. .++.+++..+|+.+++..              .....||  
T Consensus        79 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~~~~~~~--------------~~~~~Kp--  141 (207)
T 2go7_A           79 EKNAQVVLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFTEILTSQ--------------SGFVRKP--  141 (207)
T ss_dssp             TCGGGCEECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEEEEECGG--------------GCCCCTT--
T ss_pred             hccccceeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhheeeEEecC--------------cCCCCCC--
Confidence            11 34567899999999999999999999999988888 889999998888877742              1112234  


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                               ++..+..+++++|++++++++|||+.||+.|++++|...+++.+ +. .         .++..+   +++.
T Consensus       142 ---------~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~~-~~-~---------~a~~v~---~~~~  198 (207)
T 2go7_A          142 ---------SPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLE-ST-Y---------EGNHRI---QALA  198 (207)
T ss_dssp             ---------SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSC-CS-C---------TTEEEC---SSTT
T ss_pred             ---------CcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEec-CC-C---------CCCEEe---CCHH
Confidence                     68999999999999999999999999999999876654444433 22 1         123334   8888


Q ss_pred             HHHHHH
Q 044617          225 ELKKIL  230 (265)
Q Consensus       225 el~~~l  230 (265)
                      ||.++|
T Consensus       199 el~~~l  204 (207)
T 2go7_A          199 DISRIF  204 (207)
T ss_dssp             HHHHHT
T ss_pred             HHHHHH
Confidence            887765

>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}

Probab=99.86  E-value=1.8e-21  Score=161.89  Aligned_cols=135  Identities=14%  Similarity=0.055  Sum_probs=104.9

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      ..++||+.++|+.|+++|++++|+||+... +...++.+|+..+|+.+++..              .....||       
T Consensus       105 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~~~~~~--------------~~~~~Kp-------  162 (263)
T 3k1z_A          105 WQVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDFVLTSE--------------AAGWPKP-------  162 (263)
T ss_dssp             EEECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSCEEEHH--------------HHSSCTT-------
T ss_pred             ceECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhEEEeec--------------ccCCCCC-------
Confidence            468999999999999999999999998764 688899999999999888752              1223455       


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKK  228 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~  228 (265)
                          ++.++..+++++|++|+++++|||+. +|+.+|+++|...+.+..........+..  ..++..+   +++.||.+
T Consensus       163 ----~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~--~~ad~v~---~~l~el~~  233 (263)
T 3k1z_A          163 ----DPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLVVGPQALDPVVRDS--VPKEHIL---PSLAHLLP  233 (263)
T ss_dssp             ----SHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEECCSSCCCHHHHHH--SCGGGEE---SSGGGHHH
T ss_pred             ----CHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEEcCCCCCchhhccc--CCCceEe---CCHHHHHH
Confidence                89999999999999999999999997 99999998877655555443222111111  1234556   99999999


Q ss_pred             HHHHHHH
Q 044617          229 ILLHLIG  235 (265)
Q Consensus       229 ~l~~~~~  235 (265)
                      +|.++..
T Consensus       234 ~l~~~~~  240 (263)
T 3k1z_A          234 ALDCLEG  240 (263)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9988753

>1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A

Probab=99.86  E-value=4.5e-21  Score=158.33  Aligned_cols=104  Identities=10%  Similarity=0.090  Sum_probs=88.9

Q ss_pred             hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           67 LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        67 ~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      +....++||+.++|+.|+  |++++|+||+....+...++.+|+..+|+.+++.+              .....||    
T Consensus        89 ~~~~~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~~~~~~--------------~~~~~Kp----  148 (253)
T 1qq5_A           89 YNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVD--------------AKRVFKP----  148 (253)
T ss_dssp             GGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGG--------------GGTCCTT----
T ss_pred             HhcCCCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccEEEEcc--------------ccCCCCC----
Confidence            345688999999999999  89999999999999999999999999999888752              1122355    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                             ++..++.+++++|++++++++|||+.+|+.+|+++|...+.+..
T Consensus       149 -------~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~  192 (253)
T 1qq5_A          149 -------HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR  192 (253)
T ss_dssp             -------SHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred             -------CHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence                   89999999999999999999999999999999887776555543

>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}

Probab=99.86  E-value=4.1e-22  Score=156.26  Aligned_cols=138  Identities=8%  Similarity=0.003  Sum_probs=100.8

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQ---------------FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~---------------~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...++||+.++|+.|+++|++++|+||+..               ..+...++.+|  .+|+.++......         
T Consensus        25 ~~~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g--~~~~~~~~~~~~~---------   93 (179)
T 3l8h_A           25 EWIALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMG--GVVDAIFMCPHGP---------   93 (179)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTT--CCCCEEEEECCCT---------
T ss_pred             HceECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCC--CceeEEEEcCCCC---------
Confidence            568899999999999999999999999986               56778888888  3355554320000         


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCee
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLI  213 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (265)
                      .......||           ++.+++.+++++|++|+++++|||+.+|+.+|+++|+..+++. +|+............+
T Consensus        94 ~~~~~~~KP-----------~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~-~g~~~~~~~~~~~~~~  161 (179)
T 3l8h_A           94 DDGCACRKP-----------LPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQ-TGNGRKTLAQGGLPEG  161 (179)
T ss_dssp             TSCCSSSTT-----------SSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEES-TTTHHHHHHHCCCCTT
T ss_pred             CCCCCCCCC-----------CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEEC-CCCcchhhhhcccCCC
Confidence            011123455           8899999999999999999999999999999999888766665 4454444332111234


Q ss_pred             eEEEEeCCCHHHHHHHHHH
Q 044617          214 KAKVHEWSSAEELKKILLH  232 (265)
Q Consensus       214 ~~~~~~~~~~~el~~~l~~  232 (265)
                      +..+   +++.||.++|.+
T Consensus       162 d~v~---~~l~el~~~l~~  177 (179)
T 3l8h_A          162 TRVC---EDLAAVAEQLLQ  177 (179)
T ss_dssp             EEEE---SSHHHHHHHHHH
T ss_pred             cEEe---cCHHHHHHHHHh
Confidence            5666   999999888753

>3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa}

Probab=99.85  E-value=1.8e-21  Score=160.10  Aligned_cols=199  Identities=14%  Similarity=0.052  Sum_probs=131.4

Q ss_pred             CCceEEEEecCCCCCCCCc-----hHHHHHHhCchHHH----HHH-----------Hcc----CChhHHHHH-HHHHHHh
Q 044617            1 MADVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHLF----NQL-----------RST----LPWNSLMDR-MMKELHS   55 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~~----~~~-----------~~~----~~~~~~~~~-~~~~~~~   55 (265)
                      |++|+|+||+||||+++..     ...+++++|.+...    ..+           ...    ..+...... +...+..
T Consensus        20 m~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (254)
T 3umc_A           20 QGMRAILFDVFGTLVDWRSSLIEQFQALERELGGTLPCVELTDRWRQQYKPAMDRVRNGQAPWQHLDQLHRQSLEALAGE   99 (254)
T ss_dssp             SSCCEEEECCBTTTEEHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHTHHHHHHHHTTSSCCCCHHHHHHHHHHHHHHH
T ss_pred             cCCcEEEEeCCCccEecCccHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHHHH
Confidence            6789999999999999854     24556666654211    110           000    011111111 2222222


Q ss_pred             CCC--CHHH---HHHHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCce
Q 044617           56 QGK--TVED---IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRL  130 (265)
Q Consensus        56 ~~~--~~~~---~~~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~  130 (265)
                      .+.  ....   +........++|++.++|+.|++. ++++++||+....+...++.+|+.  |+.+++.+         
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~--f~~~~~~~---------  167 (254)
T 3umc_A          100 FGLALDEALLQRITGFWHRLRPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP--WDMLLCAD---------  167 (254)
T ss_dssp             TTCCCCHHHHHHHHGGGGSCEECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC--CSEECCHH---------
T ss_pred             hCCCCCHHHHHHHHHHHhcCCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC--cceEEeec---------
Confidence            232  2222   223345667899999999999986 999999999999999999999985  77777641         


Q ss_pred             EEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec---CCCchhhhhh
Q 044617          131 RILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR---KNYPLWDRIC  207 (265)
Q Consensus       131 ~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~---~~~~~~~~~~  207 (265)
                           .....||           |+.+++.+++++|++++++++|||+.||+.||+++|...+.+.+   +|+.....+.
T Consensus       168 -----~~~~~kp-----------~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~~~~~g~~~~~~l~  231 (254)
T 3umc_A          168 -----LFGHYKP-----------DPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFIARPLEYGPGQSQDLA  231 (254)
T ss_dssp             -----HHTCCTT-----------SHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTTTCTTCCSSSS
T ss_pred             -----ccccCCC-----------CHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEEecCCccCCCCCcccc
Confidence                 1122345           99999999999999999999999999999999987775555542   3332222220


Q ss_pred             cCCCeeeEEEEeCCCHHHHHHHHH
Q 044617          208 SNPMLIKAKVHEWSSAEELKKILL  231 (265)
Q Consensus       208 ~~~~~~~~~~~~~~~~~el~~~l~  231 (265)
                      . ...++..+   +++.||.++|.
T Consensus       232 ~-~~~ad~v~---~~l~el~~~l~  251 (254)
T 3umc_A          232 A-EQDWDLIA---SDLLDLHRQLA  251 (254)
T ss_dssp             C-SSCCSEEE---SSHHHHHHHHH
T ss_pred             c-CCCCcEEE---CCHHHHHHHhc
Confidence            0 11345566   99999988774

>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}

Probab=99.85  E-value=8.8e-21  Score=156.23  Aligned_cols=132  Identities=14%  Similarity=0.182  Sum_probs=101.4

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ....++||+.++|+.|+ +|++++++||+....+...++.+|+..+|+.+++.                   .||     
T Consensus       109 ~~~~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~i~~~-------------------~kp-----  163 (251)
T 2pke_A          109 HPVEVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPRIEVV-------------------SEK-----  163 (251)
T ss_dssp             CCCCBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCCEEEE-------------------SCC-----
T ss_pred             ccCCcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCceeeee-------------------CCC-----
Confidence            34678999999999999 89999999999999999999999999998877662                   134     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhh---h-hhcCCCeeeE-EEEeCC
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWD---R-ICSNPMLIKA-KVHEWS  221 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~-~~~~~~  221 (265)
                            ++..+..+++++|++++++++|||+. ||+.+|+++|...+.+ .+|+....   . +.  ...++. .+   +
T Consensus       164 ------~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~v-~~~~~~~~~~~~~~~--~~~~~~~~i---~  231 (251)
T 2pke_A          164 ------DPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIYT-PYAVTWAHEQDHGVA--ADEPRLREV---P  231 (251)
T ss_dssp             ------SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEEC-CCC---------------CCTTEEEC---S
T ss_pred             ------CHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEEE-CCCCccccccccccc--cCCCCeeee---C
Confidence                  79999999999999999999999999 9999998877755554 44432111   0 11  012233 44   8


Q ss_pred             CHHHHHHHHHHHHHh
Q 044617          222 SAEELKKILLHLIGA  236 (265)
Q Consensus       222 ~~~el~~~l~~~~~~  236 (265)
                      ++.||.++|.++...
T Consensus       232 ~~~el~~~l~~~~~~  246 (251)
T 2pke_A          232 DPSGWPAAVRALDAQ  246 (251)
T ss_dssp             SGGGHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHhChh
Confidence            999999988876543

>1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A

Probab=99.85  E-value=1.2e-20  Score=150.79  Aligned_cols=197  Identities=15%  Similarity=0.144  Sum_probs=132.0

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKS   82 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~   82 (265)
                      +++|+|||||||++ .....+++.+|.+...........+..........+...+...+.+.+......++||+.++|+.
T Consensus         2 ~k~viFD~DGTL~d-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~l~~   80 (206)
T 1rku_A            2 MEIACLDLEGVLVP-EIWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDW   80 (206)
T ss_dssp             CEEEEEESBTTTBC-CHHHHHHHHHTCGGGGCCTTTCCCHHHHHHHHHHHHHHTTCCHHHHHHHHTTCCCCTTHHHHHHH
T ss_pred             CcEEEEccCCcchh-hHHHHHHHHcCChHHHHHhcCcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHhcCCCccHHHHHHH
Confidence            58999999999999 45566777777663100001111233333333333333355556666666678899999999999


Q ss_pred             HHHcCCcEEEEeCCCHHHHHHHHHhcCcccccc-eEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHHH
Q 044617           83 AHSLGCDLKIVSDANQFYIETIMEHHGLLGCFS-EIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHV  161 (265)
Q Consensus        83 l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~-~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~  161 (265)
                      |+++ ++++|+||+....+..+++.+|+..+|. .+.+..     ++....      ..+|           ||..+..+
T Consensus        81 l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~~~~~~~-----~~~~~~------~~~p-----------~p~~~~~~  137 (206)
T 1rku_A           81 LRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDD-----SDRVVG------YQLR-----------QKDPKRQS  137 (206)
T ss_dssp             HHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEEECT-----TSCEEE------EECC-----------SSSHHHHH
T ss_pred             HHhc-CcEEEEECChHHHHHHHHHHcCCcceecceeEEcC-----CceEEe------eecC-----------CCchHHHH
Confidence            9999 9999999999999999999999998884 444421     111110      0113           67778888


Q ss_pred             HHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeE-EEEeCCCHHHHHHHHHHHH
Q 044617          162 CTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKA-KVHEWSSAEELKKILLHLI  234 (265)
Q Consensus       162 ~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~el~~~l~~~~  234 (265)
                      +++++..++++++|||+.+|+.+|+++|.. +++  ..  ...+....+   +. .+   +++.+|.++|.++.
T Consensus       138 l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~-~~~--~~--~~~~~~~~~---~~~~~---~~~~~l~~~l~~~~  200 (206)
T 1rku_A          138 VIAFKSLYYRVIAAGDSYNDTTMLSEAHAG-ILF--HA--PENVIREFP---QFPAV---HTYEDLKREFLKAS  200 (206)
T ss_dssp             HHHHHHTTCEEEEEECSSTTHHHHHHSSEE-EEE--SC--CHHHHHHCT---TSCEE---CSHHHHHHHHHHHC
T ss_pred             HHHHHhcCCEEEEEeCChhhHHHHHhcCcc-EEE--CC--cHHHHHHHh---hhccc---cchHHHHHHHHHHh
Confidence            888888899999999999999999776653 333  21  122221122   12 24   89999998887764

>2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis}

Probab=99.85  E-value=1.6e-21  Score=156.30  Aligned_cols=163  Identities=13%  Similarity=0.202  Sum_probs=115.6

Q ss_pred             CCceEEEEecCCCCCCCCch--HHHHHHhCchHHHHHHHcc------------C--ChhHHHHHHHHHHHhCCCCHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSD--NWVVTQMGLTHLFNQLRST------------L--PWNSLMDRMMKELHSQGKTVEDIA   64 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~--~~~~~~~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~~~~~~~~   64 (265)
                      ||+++|+|||||||+|+...  ...+...|.+.. ......            .  ........+...+ ......+.+.
T Consensus         3 ~m~k~iiFDlDGTL~d~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~   80 (211)
T 2i6x_A            3 AMIRNIVFDLGGVLIHLNREESIRRFKAIGVADI-EEMLDPYLQKGLFLDLESGRKSEEEFRTELSRYI-GKELTYQQVY   80 (211)
T ss_dssp             CCCSEEEECSBTTTEEECHHHHHHHHHHTTCTTH-HHHTCC---CCHHHHHHHSSSCHHHHHHHHHHHH-TSCCCHHHHH
T ss_pred             ccceEEEEeCCCeeEecchHHHHHHHHHhCCchH-HHHHHHHhCchHHHHHHcCCCCHHHHHHHHHHHh-CCCCCHHHHH
Confidence            45799999999999998764  345556665432 111111            1  1222222222222 1223444443


Q ss_pred             HHhc--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh------cCcccccceEEecCceecCCCceEEeecc
Q 044617           65 NCLR--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH------HGLLGCFSEIYTNPTYVDEQGRLRILPYH  136 (265)
Q Consensus        65 ~~~~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~------~gl~~~f~~i~~~~~~~d~~~~~~~~~~~  136 (265)
                      ..+.  ...++|++.++|+.|++ |++++|+||+....+...++.      +|+..+|+.+++..              .
T Consensus        81 ~~~~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f~~~~~~~--------------~  145 (211)
T 2i6x_A           81 DALLGFLEEISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFFDKVYASC--------------Q  145 (211)
T ss_dssp             HHHGGGEEEECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGSSEEEEHH--------------H
T ss_pred             HHHHHhhcccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHcCeEEeec--------------c
Confidence            3322  24678999999999999 999999999999999998888      89999999888741              1


Q ss_pred             ccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCC
Q 044617          137 DSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDC  191 (265)
Q Consensus       137 ~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~  191 (265)
                      ....||           ++..++.+++++|++|+++++|||+.+|+.+|+++|..
T Consensus       146 ~~~~Kp-----------~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~  189 (211)
T 2i6x_A          146 MGKYKP-----------NEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFH  189 (211)
T ss_dssp             HTCCTT-----------SHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCE
T ss_pred             cCCCCC-----------CHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCE
Confidence            122355           78999999999999999999999999999999876654

>1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A

Probab=99.85  E-value=1.7e-21  Score=162.14  Aligned_cols=104  Identities=13%  Similarity=0.177  Sum_probs=90.4

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc---CcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH---GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~---gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                      ...++||+.++|+.|+++|++++|+||+....++..++++   |+..+|+.+++.               ... .||   
T Consensus       128 ~~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~fd~i~~~---------------~~~-~KP---  188 (261)
T 1yns_A          128 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGHFDT---------------KIG-HKV---  188 (261)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEEECG---------------GGC-CTT---
T ss_pred             ccccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhccEEEec---------------CCC-CCC---
Confidence            4678999999999999999999999999999899988854   599999988873               122 466   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN  199 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~  199 (265)
                              .|..++.+++++|++|++|++|||+.+|+.+|+++|+..+.+...+
T Consensus       189 --------~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~~i~v~~~~  234 (261)
T 1yns_A          189 --------ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPG  234 (261)
T ss_dssp             --------CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTT
T ss_pred             --------CHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCEEEEEeCCC
Confidence                    7899999999999999999999999999999999888777776543

>3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp}

Probab=99.85  E-value=1.1e-20  Score=151.45  Aligned_cols=203  Identities=16%  Similarity=0.170  Sum_probs=120.8

Q ss_pred             CceEEEEecCCCCCCCCchHHHHHHhCch--H---HHHH----HHc-cCChhHHHHHHHHHHHhCCCCHHHHHHH---hc
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLT--H---LFNQ----LRS-TLPWNSLMDRMMKELHSQGKTVEDIANC---LR   68 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~--~---~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~   68 (265)
                      |+|+|+|||||||++++........+-..  .   ....    ... ...+......   .........+.+.+.   ..
T Consensus         3 mik~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~   79 (219)
T 3kd3_A            3 AMKNIIFDFDSTLIKKESLELILEPILQKSPAKLKEIEYITNLGMQGDISFRDSLQK---RLAIASPTKQSIKEFSNKYC   79 (219)
T ss_dssp             -CEEEEECCCCCCBSSCHHHHHHTTTTTTCHHHHHHHHHHHHHHHTTSSCHHHHHHH---HHHHCCCBHHHHHHHHHHHT
T ss_pred             cceEEEEeCCCCCcCcccHHHHHHHHHhcccchHHHHHHHHHHHhcCcccHHHHHHH---HHhhccCCHHHHHHHHHhhc
Confidence            46999999999999988644433222110  0   0100    001 1122222211   111122222333222   23


Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++++.|+++|++++|+||+....+...++.+|+..  +.+++....+...+.+.....    .+|      
T Consensus        80 ~~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~----~~~------  147 (219)
T 3kd3_A           80 PNLLTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPR--ENIFAVETIWNSDGSFKELDN----SNG------  147 (219)
T ss_dssp             TTTBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCG--GGEEEEEEEECTTSBEEEEEC----TTS------
T ss_pred             cccCChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCc--ccEEEeeeeecCCCceeccCC----CCC------
Confidence            45688999999999999999999999999999999999999842  122222122222333221111    112      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKK  228 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~  228 (265)
                          .|...+..+.+.+|++++++++|||+.||+.|+ ++|..++++.............   .++..+   +++.||.+
T Consensus       148 ----~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~-~~G~~~~~v~~~~~~~~~~~~~---~ad~v~---~~~~el~~  216 (219)
T 3kd3_A          148 ----ACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLY-EKGYATKFIAYMEHIEREKVIN---LSKYVA---RNVAELAS  216 (219)
T ss_dssp             ----TTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHH-HHTSCSEEEEECSSCCCHHHHH---HCSEEE---SSHHHHHH
T ss_pred             ----CcccHHHHHHHHhCCCCCCEEEEECCHhHHHHH-hCCCCcEEEeccCccccHHHHh---hcceee---CCHHHHHH
Confidence                255567777788899999999999999999998 4577766665432222222222   234555   89999887


Q ss_pred             HH
Q 044617          229 IL  230 (265)
Q Consensus       229 ~l  230 (265)
                      +|
T Consensus       217 ~l  218 (219)
T 3kd3_A          217 LI  218 (219)
T ss_dssp             HH
T ss_pred             hh
Confidence            65

>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A

Probab=99.84  E-value=1e-20  Score=153.74  Aligned_cols=167  Identities=10%  Similarity=0.113  Sum_probs=117.2

Q ss_pred             ceEEEEecCCCCCCCCch--HHHHHHhCchHH---HHHH--------Hcc--CChhHHHHHHHHHHHhCCCCHHHHHHHh
Q 044617            3 DVVVVFDFDRTLIDDDSD--NWVVTQMGLTHL---FNQL--------RST--LPWNSLMDRMMKELHSQGKTVEDIANCL   67 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~--~~~~~~~~~~~~---~~~~--------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (265)
                      +++|+||+||||++++..  ...+...|.+..   ....        +..  .....+...+.... ......+.+...+
T Consensus        28 ik~viFD~DGTL~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  106 (229)
T 4dcc_A           28 IKNLLIDLGGVLINLDRERCIENFKKIGFQNIEEKFCTHQLDGIFLQQEKGLITPAEFRDGIREMM-GKMVSDKQIDAAW  106 (229)
T ss_dssp             CCEEEECSBTTTBCBCHHHHHHHHHHHTCTTHHHHHHHTHHHHHHHHHHTTCSCHHHHHHHHHHHH-TSCCCHHHHHHHH
T ss_pred             CCEEEEeCCCeEEeCChHHHHHHHHHhCCCcHHHHHHHhcCcHHHHHHHCCCCCHHHHHHHHHHHh-CCCCCHHHHHHHH
Confidence            699999999999998753  344555565421   1111        001  12233333332222 2234455555444


Q ss_pred             cC--CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH------HhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617           68 RQ--CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIM------EHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        68 ~~--~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l------~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                      ..  ..++||+.++|+.|+++ ++++|+||+....+..++      +.+|+..+|+.+++..              ....
T Consensus       107 ~~~~~~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~fd~i~~~~--------------~~~~  171 (229)
T 4dcc_A          107 NSFLVDIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYFEKTYLSY--------------EMKM  171 (229)
T ss_dssp             HTTBCCCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHCSEEEEHH--------------HHTC
T ss_pred             HHHHHhccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhCCEEEeec--------------ccCC
Confidence            33  25789999999999998 999999999999888655      6788888999888742              2223


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                      .||           ++.+++.+++++|++|+++++|||+.+|+.+|+++|...+.+.
T Consensus       172 ~KP-----------~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~  217 (229)
T 4dcc_A          172 AKP-----------EPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTPK  217 (229)
T ss_dssp             CTT-----------CHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECCC
T ss_pred             CCC-----------CHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEEC
Confidence            455           7899999999999999999999999999999988776544444

>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}

Probab=99.84  E-value=3.2e-20  Score=150.98  Aligned_cols=171  Identities=16%  Similarity=0.142  Sum_probs=109.7

Q ss_pred             CceEEEEecCCCCCCCCchHHH---HHHhCch---HHH--------HHHH-ccCChhHHHHHHHHHHHhCCCCHHHHHHH
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWV---VTQMGLT---HLF--------NQLR-STLPWNSLMDRMMKELHSQGKTVEDIANC   66 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~---~~~~~~~---~~~--------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (265)
                      ++++|+|||||||+|++.....   +...+..   ..+        .... ...............+.  +...+.+...
T Consensus         3 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~   80 (232)
T 3fvv_A            3 TRRLALFDLDHTLLPLDSDYQWADFLARTGRAGDPAEARRRNDDLMERYNRGELTAEQAAEFMLGLLA--AHSPVELAAW   80 (232)
T ss_dssp             CCEEEEECCBTTTBSSCHHHHHHHHHHHTTSSSSHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHH--TSCHHHHHHH
T ss_pred             CCcEEEEeCCCCCcCCchHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHhc--CCCHHHHHHH
Confidence            3689999999999999864221   2222221   111        1111 11123333333322222  4444443322


Q ss_pred             h----c---CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617           67 L----R---QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        67 ~----~---~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                      .    .   ...++||+.++|+.|+++|++++|+||+....++.+++.+|+..+|.    +...++ ++.++..+...  
T Consensus        81 ~~~~~~~~~~~~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~----~~~~~~-~~~~~g~~~~~--  153 (232)
T 3fvv_A           81 HEEFMRDVIRPSLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIA----TDPEYR-DGRYTGRIEGT--  153 (232)
T ss_dssp             HHHHHHHTTGGGCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEE----CEEEEE-TTEEEEEEESS--
T ss_pred             HHHHHHHhhhhhcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEE----cceEEE-CCEEeeeecCC--
Confidence            1    1   12679999999999999999999999999999999999999864443    322222 33333222211  


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcC---CCCceEEEEcCCCCCcccccCCC
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFG---CGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~g---i~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                        +      ..+.+|+..++.+++++|   ++++++++||||.+|+.+++++|
T Consensus       154 --~------~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag  198 (232)
T 3fvv_A          154 --P------SFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVT  198 (232)
T ss_dssp             --C------SSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSS
T ss_pred             --C------CcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCC
Confidence              0      113448999999999999   99999999999999999997644

>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*

Probab=99.84  E-value=1.4e-20  Score=150.19  Aligned_cols=171  Identities=18%  Similarity=0.269  Sum_probs=115.4

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHH----cc-CChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLR----ST-LPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVA   77 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   77 (265)
                      +|+|+|||||||+|+.....+.+..+.........    .. ..+.......  .....+.......+.+....+.|++.
T Consensus         5 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~   82 (211)
T 1l7m_A            5 KKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKR--VSLLKDLPIEKVEKAIKRITPTEGAE   82 (211)
T ss_dssp             CEEEEEECCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHHH--HHTTTTCBHHHHHHHHHTCCBCTTHH
T ss_pred             CcEEEEeCCCCCCCccHHHHHHHHhCcHHHHHHHHHHHHcCCCCHHHHHHHH--HHHhcCCCHHHHHHHHHhCCCCccHH
Confidence            68999999999999987767777777653322221    11 1222111111  11123444344445555677889999


Q ss_pred             HHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHH
Q 044617           78 AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFV  157 (265)
Q Consensus        78 e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~  157 (265)
                      ++|+.++++|++++++|++....+...++.+++..+|..+...    . ++.+.......         . ..+.+|+..
T Consensus        83 ~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~---------~-~~~~~K~~~  147 (211)
T 1l7m_A           83 ETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIV----K-DGKLTGDVEGE---------V-LKENAKGEI  147 (211)
T ss_dssp             HHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE----E-TTEEEEEEECS---------S-CSTTHHHHH
T ss_pred             HHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEeeeEE----E-CCEEcCCcccC---------c-cCCccHHHH
Confidence            9999999999999999999988888888998886655443321    1 11111100000         0 124469999


Q ss_pred             HHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          158 LDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       158 i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                      +..+++++|++++++++|||+.||+.|++++|.
T Consensus       148 l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~  180 (211)
T 1l7m_A          148 LEKIAKIEGINLEDTVAVGDGANDISMFKKAGL  180 (211)
T ss_dssp             HHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSE
T ss_pred             HHHHHHHcCCCHHHEEEEecChhHHHHHHHCCC
Confidence            999999999999999999999999999977554

>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}

Probab=99.84  E-value=2.1e-21  Score=157.83  Aligned_cols=199  Identities=9%  Similarity=0.069  Sum_probs=121.2

Q ss_pred             ceEEEEecCCCCCCCCc-----hHHHHHHhCchHHHHHHHc--cCChhHHHHHHHHHHHhC-CCCHHHH-----------
Q 044617            3 DVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHLFNQLRS--TLPWNSLMDRMMKELHSQ-GKTVEDI-----------   63 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~-----------   63 (265)
                      +|+|+|||||||+++..     ...+++++|.+........  ..........+....... ....+.+           
T Consensus         2 ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (233)
T 3nas_A            2 LKAVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLKGISREESLESILIFGGAETKYTNAEKQELMHRKNRDY   81 (233)
T ss_dssp             CCEEEECSBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHTTTCCHHHHHHHHHHHTTCTTTSCHHHHHHHHHHHHHHH
T ss_pred             CcEEEECCCCCcCCCHHHHHHHHHHHHHHcCCCCCHHHHHHHcCCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Confidence            58999999999999864     2455666666522211111  112222222221111000 1111111           


Q ss_pred             HHHhcC---CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeecccccc
Q 044617           64 ANCLRQ---CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTL  140 (265)
Q Consensus        64 ~~~~~~---~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~  140 (265)
                      ...+..   ..++||+.++|+.|+++|++++|+||+..  +...++.+|+..+|+.+++.+.              ....
T Consensus        82 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~~i~~~~~--------------~~~~  145 (233)
T 3nas_A           82 QMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFHAIVDPTT--------------LAKG  145 (233)
T ss_dssp             HHHHHTCCGGGSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCSEECCC--------------------
T ss_pred             HHHHhhcCcCCcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcCEEeeHhh--------------CCCC
Confidence            112222   23799999999999999999999999854  8888999999999998887421              1123


Q ss_pred             CCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeC
Q 044617          141 SHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEW  220 (265)
Q Consensus       141 kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (265)
                      ||           |+.+++.+++++|++++++++|||+.||+.||+++|...+.+ +..    ..+.    .++..+   
T Consensus       146 Kp-----------~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~----~~~~----~ad~v~---  202 (233)
T 3nas_A          146 KP-----------DPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQG----QPML----GADLVV---  202 (233)
T ss_dssp             --------------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C---------------CSEEC---
T ss_pred             CC-----------ChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCc----cccc----cCCEEe---
Confidence            44           789999999999999999999999999999998877643333 221    1111    233444   


Q ss_pred             CCHHHHH-HHHHHHHHhhccc
Q 044617          221 SSAEELK-KILLHLIGAISIK  240 (265)
Q Consensus       221 ~~~~el~-~~l~~~~~~~~~~  240 (265)
                      +++.||. ..+.+++..+..+
T Consensus       203 ~s~~el~~~~~~~~~~~~~~~  223 (233)
T 3nas_A          203 RQTSDLTLELLHEEWEQYRIR  223 (233)
T ss_dssp             SSGGGCCHHHHHHHHHHHHHT
T ss_pred             CChHhCCHHHHHHHHHHHHhh
Confidence            7777743 3444555554433

>3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV}

Probab=99.84  E-value=1.5e-20  Score=152.27  Aligned_cols=127  Identities=11%  Similarity=0.056  Sum_probs=99.2

Q ss_pred             hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           67 LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        67 ~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      .....++||+.++|+.|+++ ++++++||+...     ++.+|+..+|+.+++.+              .....||    
T Consensus       101 ~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f~~~~~~~--------------~~~~~kp----  156 (230)
T 3vay_A          101 RHQVQIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYFAFALCAE--------------DLGIGKP----  156 (230)
T ss_dssp             HTCCCBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGCSEEEEHH--------------HHTCCTT----
T ss_pred             hccCccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHeeeeEEcc--------------ccCCCCc----
Confidence            34678899999999999998 999999998765     67889999999888742              1122355    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                             |+.+++.+++++|++|+++++|||+. ||+.+|+++|...+.+..++.....     ...++..+   +++.|
T Consensus       157 -------~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~-----~~~~~~~~---~~l~e  221 (230)
T 3vay_A          157 -------DPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDA-----DRLPDAEI---HNLSQ  221 (230)
T ss_dssp             -------SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCS-----SSCCSEEE---SSGGG
T ss_pred             -------CHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcc-----cCCCCeeE---CCHHH
Confidence                   89999999999999999999999997 9999999888766666554332211     12345566   89999


Q ss_pred             HHHHHHH
Q 044617          226 LKKILLH  232 (265)
Q Consensus       226 l~~~l~~  232 (265)
                      |.++|.+
T Consensus       222 l~~~l~~  228 (230)
T 3vay_A          222 LPEVLAR  228 (230)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHh
Confidence            9888764

>2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6

Probab=99.84  E-value=2.2e-20  Score=151.12  Aligned_cols=198  Identities=15%  Similarity=0.195  Sum_probs=129.2

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchHH---HHHHHccCChhHHHHHHHHHHHhCCCCHH---HH----H-H
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL---FNQLRSTLPWNSLMDRMMKELHSQGKTVE---DI----A-N   65 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~-~   65 (265)
                      ++|+|+||+||||+++...     ..+++++|.+..   ................+..... ......   .+    . .
T Consensus         3 ~ik~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   81 (229)
T 2fdr_A            3 GFDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEAS-IPLSASLLDKSEKLLDMR   81 (229)
T ss_dssp             CCSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHC-CCCCTHHHHHHHHHHHHH
T ss_pred             CccEEEEcCCCCcCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCHHHHHHHHHHHcC-CCCCHHHHHHHHHHHHHH
Confidence            4799999999999998653     345556665422   1111112223333333322221 111111   11    1 1


Q ss_pred             HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc-ceEEecCceecCCCceEEeecccccc--CC
Q 044617           66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF-SEIYTNPTYVDEQGRLRILPYHDSTL--SH  142 (265)
Q Consensus        66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f-~~i~~~~~~~d~~~~~~~~~~~~~~~--kp  142 (265)
                      ......++|++.++++.++.   +++++||+....+...++.+++..+| +.+++.+              .....  ||
T Consensus        82 ~~~~~~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~~~~~~--------------~~~~~~~kp  144 (229)
T 2fdr_A           82 LERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAK--------------DLGADRVKP  144 (229)
T ss_dssp             HHHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHH--------------HHCTTCCTT
T ss_pred             hhcCCccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccceEEecc--------------ccccCCCCc
Confidence            12356788999999988874   89999999999999999999999999 7777742              11122  34


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCc---hhhhhhcCCCeeeEEEEe
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP---LWDRICSNPMLIKAKVHE  219 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  219 (265)
                                 |+.+++.+++++|++++++++|||+.||+.||+++|...+.+......   ....+++.  .++..+  
T Consensus       145 -----------k~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~~~~~~~~~~~~~l~~~--~ad~v~--  209 (229)
T 2fdr_A          145 -----------KPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDA--GAETVI--  209 (229)
T ss_dssp             -----------SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHH--TCSEEE--
T ss_pred             -----------CHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEecCCccchhhhHHHhhc--CCceee--
Confidence                       899999999999999999999999999999998877655555543221   01112211  134455  


Q ss_pred             CCCHHHHHHHHHHH
Q 044617          220 WSSAEELKKILLHL  233 (265)
Q Consensus       220 ~~~~~el~~~l~~~  233 (265)
                       +++.||.++|+++
T Consensus       210 -~~~~el~~~l~~~  222 (229)
T 2fdr_A          210 -SRMQDLPAVIAAM  222 (229)
T ss_dssp             -SCGGGHHHHHHHH
T ss_pred             -cCHHHHHHHHHHh
Confidence             8889988887765

>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}

Probab=99.83  E-value=1.9e-20  Score=165.80  Aligned_cols=171  Identities=18%  Similarity=0.177  Sum_probs=125.6

Q ss_pred             CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHc-----cCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhH
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRS-----TLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHV   76 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   76 (265)
                      |+++|+|||||||++++....+....|.......+..     ...+..........+  .+...+.+........++||+
T Consensus       184 ~~k~viFD~DgTLi~~~~~~~la~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~pg~  261 (415)
T 3p96_A          184 AKRLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATL--AGLPATVIDEVAGQLELMPGA  261 (415)
T ss_dssp             CCCEEEECTBTTTBSSCHHHHHHHHTTCHHHHHHHHHHHHTTCSCHHHHHHHHHHTT--TTCBTHHHHHHHHHCCBCTTH
T ss_pred             CCcEEEEcCcccCcCCchHHHHHHHcCCcHHHHHHHHHHhcCCcCHHHHHHHHHHHh--cCCCHHHHHHHHHhCccCccH
Confidence            3689999999999999988888888887654433321     123333333322211  245556666666678999999


Q ss_pred             HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeec-cccccCCCcccccCCCCchH
Q 044617           77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPY-HDSTLSHHGCNLCPSNLCKG  155 (265)
Q Consensus        77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~-~~~~~kp~~~~~~~~~~~K~  155 (265)
                      .++|+.|+++|++++|+||+....+..+++.+|+..+|...+.    +. ++.++.... .....||           |+
T Consensus       262 ~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~----~~-dg~~tg~~~~~v~~~kp-----------k~  325 (415)
T 3p96_A          262 RTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELE----IV-DGTLTGRVVGPIIDRAG-----------KA  325 (415)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEECEE----EE-TTEEEEEECSSCCCHHH-----------HH
T ss_pred             HHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeeeeEE----Ee-CCEEEeeEccCCCCCcc-----------hH
Confidence            9999999999999999999999999999999998766654432    21 233332111 1112334           99


Q ss_pred             HHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          156 FVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       156 ~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                      ..++.+++++|+++++++||||+.||+.+|+++|.
T Consensus       326 ~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~  360 (415)
T 3p96_A          326 TALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGL  360 (415)
T ss_dssp             HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred             HHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCC
Confidence            99999999999999999999999999999977553

>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20

Probab=99.83  E-value=1.8e-20  Score=153.32  Aligned_cols=208  Identities=17%  Similarity=0.201  Sum_probs=126.6

Q ss_pred             CceEEEEecCCCCCCCCchHHHHHHhCchH---HHHHHHcc-CChhHHHHHHHHHHHhCCCCHHHHHHH-hcCCCCChhH
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTH---LFNQLRST-LPWNSLMDRMMKELHSQGKTVEDIANC-LRQCPLDSHV   76 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~   76 (265)
                      |+++|+|||||||+++++...++..++...   ........ ..+......+...+.  ....+.+.++ .....++||+
T Consensus         5 ~~k~viFD~DGTL~d~ds~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~pg~   82 (236)
T 2fea_A            5 RKPFIICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLP--SSLKEEITSFVLEDAKIREGF   82 (236)
T ss_dssp             CCEEEEECCTTTTBSSCHHHHHHHHHSCTHHHHHHHHHHTTSSCHHHHHHHHHTTSB--GGGHHHHHHHHHHHCCBCTTH
T ss_pred             CCcEEEEeCCCCCCccchHHHHHHHhchhhHHHHHHHHHhCcCcHHHHHHHHHHhcC--CChHHHHHHHHhcCCCCCccH
Confidence            368999999999999887766666665421   11212221 233333333221110  1113344443 3457899999


Q ss_pred             HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc-ccCCCCchH
Q 044617           77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN-LCPSNLCKG  155 (265)
Q Consensus        77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~-~~~~~~~K~  155 (265)
                      .++|+.|+++|++++|+||+....++.+++  |+..+ +.+++++.... .+.+...     ..||.... ....+.+|+
T Consensus        83 ~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~v~~~~~~~~-~~~~~~~-----~~kp~p~~~~~~~~~~K~  153 (236)
T 2fea_A           83 REFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DRIYCNHASFD-NDYIHID-----WPHSCKGTCSNQCGCCKP  153 (236)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GGEEEEEEECS-SSBCEEE-----CTTCCCTTCCSCCSSCHH
T ss_pred             HHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-CeEEeeeeEEc-CCceEEe-----cCCCCccccccccCCcHH
Confidence            999999999999999999999999999888  77555 77887643332 1221111     12231100 000244566


Q ss_pred             HHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          156 FVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       156 ~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      .    +++++++++++++||||+.+|+.+|+++|.   .++.++  ....+.... .++..+   +++.||.++|.++
T Consensus       154 ~----~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~---~~~~~~--~~~~~~~~~-~~~~~~---~~~~el~~~l~~~  218 (236)
T 2fea_A          154 S----VIHELSEPNQYIIMIGDSVTDVEAAKLSDL---CFARDY--LLNECREQN-LNHLPY---QDFYEIRKEIENV  218 (236)
T ss_dssp             H----HHHHHCCTTCEEEEEECCGGGHHHHHTCSE---EEECHH--HHHHHHHTT-CCEECC---SSHHHHHHHHHTS
T ss_pred             H----HHHHHhccCCeEEEEeCChHHHHHHHhCCe---eeechH--HHHHHHHCC-CCeeec---CCHHHHHHHHHHh
Confidence            4    456678999999999999999999976554   444332  222222111 123334   8999999888765

>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3

Probab=99.83  E-value=3.1e-21  Score=151.96  Aligned_cols=159  Identities=15%  Similarity=0.082  Sum_probs=105.7

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHH---HHccCChhHHHHHHHHHHHhCCCCH----HHHHHHhc
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQ---LRSTLPWNSLMDRMMKELHSQGKTV----EDIANCLR   68 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~   68 (265)
                      |++|+|+||+||||+|+...     ..+++++|.+.....   .+....+.....    .........    +.......
T Consensus         4 M~~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~   79 (190)
T 2fi1_A            4 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAIET----FAPNLENFLEKYKENEARELE   79 (190)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHHHH----HCTTCTTHHHHHHHHHHHHTT
T ss_pred             CcccEEEEeCCCCcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHHHccccHHHHHH----HhhhHHHHHHHHHHHHHHhcC
Confidence            44799999999999997542     334555554321111   111111111111    000000001    11122233


Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++|++.++++.|+++|++++++||+.. .+...++.+++..+|+.+++.+              .....||      
T Consensus        80 ~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f~~~~~~~--------------~~~~~kp------  138 (190)
T 2fi1_A           80 HPILFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYFTEVVTSS--------------SGFKRKP------  138 (190)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGEEEEECGG--------------GCCCCTT------
T ss_pred             cCccCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhheeeeeecc--------------ccCCCCC------
Confidence            345899999999999999999999999864 6888899999999998887742              1112344      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDC  191 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~  191 (265)
                           |+..++.+++++|++  ++++|||+.||+.+|+++|..
T Consensus       139 -----~~~~~~~~~~~~~~~--~~~~iGD~~~Di~~a~~aG~~  174 (190)
T 2fi1_A          139 -----NPESMLYLREKYQIS--SGLVIGDRPIDIEAGQAAGLD  174 (190)
T ss_dssp             -----SCHHHHHHHHHTTCS--SEEEEESSHHHHHHHHHTTCE
T ss_pred             -----CHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHcCCe
Confidence                 899999999999998  999999999999999876654

>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2

Probab=99.83  E-value=3.2e-21  Score=153.83  Aligned_cols=168  Identities=13%  Similarity=0.175  Sum_probs=112.3

Q ss_pred             CceEEEEecCCCCCCCCc--hHHHHHHhCchHH---HHHH--------HccC--ChhHHHHHHHHHHHhCCCCHHHHHHH
Q 044617            2 ADVVVVFDFDRTLIDDDS--DNWVVTQMGLTHL---FNQL--------RSTL--PWNSLMDRMMKELHSQGKTVEDIANC   66 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~--~~~~~~~~~~~~~---~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   66 (265)
                      ++++|+||+||||+|++.  ....+...+....   ...+        +...  ........+.... ......+.+...
T Consensus         6 ~~k~viFDlDGTL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~   84 (206)
T 2b0c_A            6 AKMLYIFDLGNVIVDIDFNRVLGAWSDLTRIPLASLKKSFHMGEAFHQHERGEISDEAFAEALCHEM-ALPLSYEQFSHG   84 (206)
T ss_dssp             CCCEEEECCBTTTEEEETHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHTTCSCHHHHHHHHHHHH-TCCCCHHHHHHH
T ss_pred             cccEEEEcCCCeeecCcHHHHHHHHHHhcCCCHHHHHHHHhcccHHHHHhcCCCCHHHHHHHHHHHh-CCCCCHHHHHHH
Confidence            478999999999999872  2333444443211   1111        0011  1122222222211 122333444333


Q ss_pred             hcC--CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-cCcccccceEEecCceecCCCceEEeeccccccCCC
Q 044617           67 LRQ--CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        67 ~~~--~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      +..  ..++||+.++|+.|+++|++++|+||+....+...++. +|+..+|+.+++..              .....|| 
T Consensus        85 ~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~~f~~~~~~~--------------~~~~~Kp-  149 (206)
T 2b0c_A           85 WQAVFVALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQ--------------DLGMRKP-  149 (206)
T ss_dssp             HHTCEEEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEHH--------------HHTCCTT-
T ss_pred             HHHHhcccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhhheeeEEEec--------------ccCCCCC-
Confidence            332  56799999999999999999999999988877766666 68888888888742              1122355 


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeee
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVM  195 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~  195 (265)
                                ++..+..+++++|++++++++|||+.+|+.+|+++|...+.+
T Consensus       150 ----------~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~  191 (206)
T 2b0c_A          150 ----------EARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV  191 (206)
T ss_dssp             ----------CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred             ----------CHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEe
Confidence                      788999999999999999999999999999998876654444

>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}

Probab=99.82  E-value=7.2e-21  Score=151.63  Aligned_cols=131  Identities=9%  Similarity=0.046  Sum_probs=95.9

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|+.|+++|++++|+||+....+...+.     .+|+.+++.+              .....||      
T Consensus        34 ~~~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-----~~~d~v~~~~--------------~~~~~KP------   88 (196)
T 2oda_A           34 HAQLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-----PVNDWMIAAP--------------RPTAGWP------   88 (196)
T ss_dssp             GGSBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-----TTTTTCEECC--------------CCSSCTT------
T ss_pred             cCCcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-----ccCCEEEECC--------------cCCCCCC------
Confidence            45789999999999999999999999998877744332     3466777641              1123456      


Q ss_pred             CCCCchHHHHHHHHHhcCCCC-ceEEEEcCCCCCcccccCCCCCCeeeecCCCch-----------------------hh
Q 044617          149 PSNLCKGFVLDHVCTSFGCGK-QRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPL-----------------------WD  204 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~-~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~-----------------------~~  204 (265)
                           +|..+..+++++|+.+ ++++||||+.+|+.+|+++|+..+++.. |+..                       ..
T Consensus        89 -----~p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~~~i~v~~-g~~~~~~~~~~~~~~~~~e~~~~~~~~~~  162 (196)
T 2oda_A           89 -----QPDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGLWTIGLAS-CGPLCGLSPSQWQALNNAEREQRRAQATL  162 (196)
T ss_dssp             -----STHHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTCEEEEESS-SSTTTCCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred             -----ChHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCCEEEEEcc-CCccccccHHHhhhcchhhhhhhHHHHHH
Confidence                 8899999999999975 8999999999999999998876666654 3321                       01


Q ss_pred             hhhcCCCeeeEEEEeCCCHHHHHHHHHHHHH
Q 044617          205 RICSNPMLIKAKVHEWSSAEELKKILLHLIG  235 (265)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~  235 (265)
                      .+..  ..++..+   +++.||.++|..+.+
T Consensus       163 ~l~~--~~~d~vi---~~~~eL~~~l~~~~~  188 (196)
T 2oda_A          163 KLYS--LGVHSVI---DHLGELESCLADIAL  188 (196)
T ss_dssp             HHHH--TTCSEEE---SSGGGHHHHHHHHHH
T ss_pred             HHHH--cCCCEEe---CCHHHHHHHHHHHHH
Confidence            1111  1234556   899999988877644

>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*

Probab=99.82  E-value=3.1e-20  Score=149.60  Aligned_cols=142  Identities=12%  Similarity=0.120  Sum_probs=100.8

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDAN---------------QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~---------------~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...++||+.++|+.|+++|++++|+||+.               ...+...++.+|+.  |+.++......+  +.....
T Consensus        48 ~~~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--f~~~~~~~~~~~--~~~~~~  123 (211)
T 2gmw_A           48 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYCPHHPQ--GSVEEF  123 (211)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCBTT--CSSGGG
T ss_pred             cCcCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc--eEEEEECCcCCC--Cccccc
Confidence            46789999999999999999999999998               47888999999987  766654311000  000000


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCC-eeeecCCCchhhhhhcCCCe
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCD-FVMPRKNYPLWDRICSNPML  212 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~  212 (265)
                      .......||           ++.+++.+++++|+++++++||||+.+|+.+|+++|... +++ .+|+........   .
T Consensus       124 ~~~~~~~KP-----------~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v-~~g~~~~~~~~~---~  188 (211)
T 2gmw_A          124 RQVCDCRKP-----------HPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLV-RTGKPITPEAEN---A  188 (211)
T ss_dssp             BSCCSSSTT-----------SCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEE-SSSSCCCHHHHH---H
T ss_pred             CccCcCCCC-----------CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEE-ecCCCccccccC---C
Confidence            001122344           889999999999999999999999999999999988776 555 444433222211   2


Q ss_pred             eeEEEEeCCCHHHHHHHHHH
Q 044617          213 IKAKVHEWSSAEELKKILLH  232 (265)
Q Consensus       213 ~~~~~~~~~~~~el~~~l~~  232 (265)
                      ++..+   +++.||.++|.+
T Consensus       189 ~d~vi---~~l~el~~~l~~  205 (211)
T 2gmw_A          189 ADWVL---NSLADLPQAIKK  205 (211)
T ss_dssp             CSEEE---SCGGGHHHHHHC
T ss_pred             CCEEe---CCHHHHHHHHHh
Confidence            34555   889998877654

>2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A

Probab=99.82  E-value=1.4e-20  Score=151.30  Aligned_cols=161  Identities=13%  Similarity=0.171  Sum_probs=107.8

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCch---HHHHHHHccCChhHHHHHHHHHHHhCCCCHHH-----------H
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLT---HLFNQLRSTLPWNSLMDRMMKELHSQGKTVED-----------I   63 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~   63 (265)
                      +|+|+|||||||+|+...     ..+++++|.+   ..................+.... ......+.           +
T Consensus         2 ~k~i~fDlDGTL~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~   80 (221)
T 2wf7_A            2 FKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLA-DKKVSAEEFKELAKRKNDNY   80 (221)
T ss_dssp             CCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCSHHHHTTTTTCCHHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHH
T ss_pred             CcEEEECCCCcccCChHHHHHHHHHHHHHcCCCCCCHHHHHHhCCCCHHHHHHHHHHHh-CCCCChHHHHHHHHHHHHHH
Confidence            699999999999998642     3455566654   21111111111222222221111 00122111           1


Q ss_pred             HHHhc---CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeecccccc
Q 044617           64 ANCLR---QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTL  140 (265)
Q Consensus        64 ~~~~~---~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~  140 (265)
                      .....   ...++|++.++++.++++|++++++|++  ..+...++.+++..+|+.+++.+              .....
T Consensus        81 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~~~~~~~--------------~~~~~  144 (221)
T 2wf7_A           81 VKMIQDVSPADVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFDAIADPA--------------EVAAS  144 (221)
T ss_dssp             HHHGGGCCGGGBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCSEECCTT--------------TSSSC
T ss_pred             HHHHhhccCCCCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcceEeccc--------------cCCCC
Confidence            11111   3467899999999999999999999998  56777888999999998887641              11123


Q ss_pred             CCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCC
Q 044617          141 SHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDC  191 (265)
Q Consensus       141 kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~  191 (265)
                      ||           ++..++.+++++|++++++++|||+.||+.||+++|..
T Consensus       145 Kp-----------~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~  184 (221)
T 2wf7_A          145 KP-----------APDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGAL  184 (221)
T ss_dssp             TT-----------SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred             CC-----------ChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCE
Confidence            44           78899999999999999999999999999999876654

>4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A

Probab=99.82  E-value=8.1e-20  Score=144.69  Aligned_cols=186  Identities=15%  Similarity=0.116  Sum_probs=123.5

Q ss_pred             eEEEEecCCCCCCCCchHHHHHHhCchHHH---HHHHc-cCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHH
Q 044617            4 VVVVFDFDRTLIDDDSDNWVVTQMGLTHLF---NQLRS-TLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAA   79 (265)
Q Consensus         4 k~iifD~DGTL~ds~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~   79 (265)
                      .+++|||||||++++....+.+..|.....   ..... ...+..........  ..+...+.+........++|++.++
T Consensus        10 ~ivifDlDGTL~d~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   87 (201)
T 4ap9_A           10 KVAVIDIEGTLTDFEFWREMARITGKREIEELLEKGLSGEVEWLDSLLKRVGL--IRGIDEGTFLRTREKVNVSPEAREL   87 (201)
T ss_dssp             CEEEEECBTTTBCCCHHHHHHHHHCCHHHHHHHHHHHHTSSCHHHHHHHHHHH--TTTCBHHHHHHGGGGCCCCHHHHHH
T ss_pred             eeEEecccCCCcchHHHHHHHHHhChHHHHHHHHHHhcCCCCHHHHHHHHHHH--hcCCCHHHHHHHHHhCCCChhHHHH
Confidence            344599999999998667777777763211   11111 12333333322221  2355566677777788999999999


Q ss_pred             HHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHH
Q 044617           80 IKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLD  159 (265)
Q Consensus        80 l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~  159 (265)
                      |+.|+++|++++|+||+....+... +.+|+..+++.+....      +.... +      +|       ....|...++
T Consensus        88 l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~~~~~~~~~------~~~~~-~------~~-------~~~~k~~~l~  146 (201)
T 4ap9_A           88 VETLREKGFKVVLISGSFEEVLEPF-KELGDEFMANRAIFED------GKFQG-I------RL-------RFRDKGEFLK  146 (201)
T ss_dssp             HHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEEEEEEEEET------TEEEE-E------EC-------CSSCHHHHHG
T ss_pred             HHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhheeeEEeeC------CceEC-C------cC-------CccCHHHHHH
Confidence            9999999999999999999888888 8899877655444321      22211 0      11       1123666665


Q ss_pred             HHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          160 HVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       160 ~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      .+      +++++++|||+.||+.+++++|. ++++.... .          .++..+   .++.||.++|+++
T Consensus       147 ~l------~~~~~i~iGD~~~Di~~~~~ag~-~v~~~~~~-~----------~ad~v~---~~~~el~~~l~~l  199 (201)
T 4ap9_A          147 RF------RDGFILAMGDGYADAKMFERADM-GIAVGREI-P----------GADLLV---KDLKELVDFIKNL  199 (201)
T ss_dssp             GG------TTSCEEEEECTTCCHHHHHHCSE-EEEESSCC-T----------TCSEEE---SSHHHHHHHHHTC
T ss_pred             hc------CcCcEEEEeCCHHHHHHHHhCCc-eEEECCCC-c----------cccEEE---ccHHHHHHHHHHh
Confidence            55      78999999999999999987665 35444321 1          234555   8899998888764

>2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans}

Probab=99.81  E-value=5.5e-21  Score=155.81  Aligned_cols=193  Identities=18%  Similarity=0.210  Sum_probs=121.8

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCchHH------HHHHHccCC---hhHHHHHHHHHHHhCC---CCHHHHHH
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHL------FNQLRSTLP---WNSLMDRMMKELHSQG---KTVEDIAN   65 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~------~~~~~~~~~---~~~~~~~~~~~~~~~~---~~~~~~~~   65 (265)
                      +|+|+|||||||+|+...     ..+++.+|.+..      ...+....+   +......+........   ...+.+..
T Consensus        11 ~k~viFDlDGTL~ds~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (231)
T 2p11_A           11 DIVFLFDCDNTLLDNDHVLADLRAHMMREFGAQNSARYWEIFETLRTELGYADYLGALQRYRLEQPRDTRLLLMSSFLID   90 (231)
T ss_dssp             SEEEEECCBTTTBCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCTTCTGGGGGHHHHHH
T ss_pred             CeEEEEcCCCCCEecHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHhcCchHHHHHHHHHHhccccchHHHHHHHHHHH
Confidence            579999999999998653     445566666432      122211111   1122111111100000   01122222


Q ss_pred             HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                      ......++||+.++|+.|+++| +++|+||+....+...++.+|+.++|+.+...              ..         
T Consensus        91 ~~~~~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f~~~~~~--------------~~---------  146 (231)
T 2p11_A           91 YPFASRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEVEGRVLI--------------YI---------  146 (231)
T ss_dssp             CCGGGGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHTTTCEEE--------------ES---------
T ss_pred             HHHhCCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhcCeeEEe--------------cC---------
Confidence            2335678999999999999999 99999999999999999999998887654431              11         


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCC---CcccccCCCCCCeeeecCCCc--hhhhhhcCCCeeeEEEEeC
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRG---DFCPTLKLRDCDFVMPRKNYP--LWDRICSNPMLIKAKVHEW  220 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~---Di~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  220 (265)
                             .|+..++.+++  +++|+++++|||+.+   |+.+|+++|...+++. +++.  ....+...+ .++..+   
T Consensus       147 -------~K~~~~~~~~~--~~~~~~~~~vgDs~~d~~di~~A~~aG~~~i~v~-~g~~~~~~~~l~~~~-~~~~~i---  212 (231)
T 2p11_A          147 -------HKELMLDQVME--CYPARHYVMVDDKLRILAAMKKAWGARLTTVFPR-QGHYAFDPKEISSHP-PADVTV---  212 (231)
T ss_dssp             -------SGGGCHHHHHH--HSCCSEEEEECSCHHHHHHHHHHHGGGEEEEEEC-CSSSSSCHHHHHHSC-CCSEEE---
T ss_pred             -------ChHHHHHHHHh--cCCCceEEEEcCccchhhhhHHHHHcCCeEEEeC-CCCCCCcchhccccC-CCceee---
Confidence                   16767777776  689999999999999   8899988777656554 4421  222222110 134555   


Q ss_pred             CCHHHHHHHHHHH
Q 044617          221 SSAEELKKILLHL  233 (265)
Q Consensus       221 ~~~~el~~~l~~~  233 (265)
                      +++.||.++|.++
T Consensus       213 ~~~~el~~~l~~~  225 (231)
T 2p11_A          213 ERIGDLVEMDAEW  225 (231)
T ss_dssp             SSGGGGGGCGGGG
T ss_pred             cCHHHHHHHHHHH
Confidence            8888887766543

>2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22

Probab=99.80  E-value=7.2e-20  Score=151.44  Aligned_cols=102  Identities=10%  Similarity=0.062  Sum_probs=83.2

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc--C---------cccccceEEecCceecCCCceEEeeccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH--G---------LLGCFSEIYTNPTYVDEQGRLRILPYHD  137 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~--g---------l~~~f~~i~~~~~~~d~~~~~~~~~~~~  137 (265)
                      ...++||+.++|+.    |++++|+||+....++..++..  |         +..+|+.++..              ...
T Consensus       123 ~~~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~~~f~~--------------~~~  184 (253)
T 2g80_A          123 KAPVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDI--------------NTS  184 (253)
T ss_dssp             CBCCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECH--------------HHH
T ss_pred             cCCCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcceEEee--------------ecc
Confidence            35789999999987    8999999999999999999876  4         66666665542              000


Q ss_pred             cccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCC
Q 044617          138 STLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNY  200 (265)
Q Consensus       138 ~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~  200 (265)
                       -.||           .|..+..+++++|++|++|++|||+.+|+.+|+++|+..+++.+.+.
T Consensus       185 -g~KP-----------~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~~i~v~~~~~  235 (253)
T 2g80_A          185 -GKKT-----------ETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPGN  235 (253)
T ss_dssp             -CCTT-----------CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTTS
T ss_pred             -CCCC-----------CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEEcCCCC
Confidence             0266           79999999999999999999999999999999998887777765443

>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A

Probab=99.80  E-value=2.4e-19  Score=141.58  Aligned_cols=98  Identities=17%  Similarity=0.142  Sum_probs=84.5

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCC-HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDAN-QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~-~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++|+.|+++|++++|+||+. ...+...++.+|+..+|+.++..              .     +|     
T Consensus        66 ~~~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f~~~~~~--------------~-----~~-----  121 (187)
T 2wm8_A           66 DVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIY--------------P-----GS-----  121 (187)
T ss_dssp             EECCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTEEEEEES--------------S-----SC-----
T ss_pred             ccCcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhcceeEEE--------------e-----Cc-----
Confidence            45789999999999999999999999998 68999999999999888876442              0     12     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                            |+..+..+++++|++++++++|||+.+|+.+|+++|...+.+.
T Consensus       122 ------k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~i~v~  164 (187)
T 2wm8_A          122 ------KITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQ  164 (187)
T ss_dssp             ------HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEECS
T ss_pred             ------hHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEEEEEC
Confidence                  8899999999999999999999999999999988776544443

>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}

Probab=99.80  E-value=2.7e-19  Score=153.96  Aligned_cols=205  Identities=14%  Similarity=0.184  Sum_probs=139.6

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHc---c--CChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRS---T--LPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVA   77 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~   77 (265)
                      .++|+||+||||++.+....+....+.......+..   .  ..+..........+  .+...+.+.......+++||+.
T Consensus       107 ~~~viFD~DgTLi~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~pg~~  184 (335)
T 3n28_A          107 PGLIVLDMDSTAIQIECIDEIAKLAGVGEEVAEVTERAMQGELDFEQSLRLRVSKL--KDAPEQILSQVRETLPLMPELP  184 (335)
T ss_dssp             CCEEEECSSCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSSCHHHHHHHHHHTT--TTCBTTHHHHHHTTCCCCTTHH
T ss_pred             CCEEEEcCCCCCcChHHHHHHHHHcCCchHHHHHHHHHhcCCCCHHHHHHHHHHHh--cCCCHHHHHHHHHhCCcCcCHH
Confidence            579999999999997777777777776654333221   1  22332222221111  2333444555556788999999


Q ss_pred             HHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEe-eccccccCCCcccccCCCCchHH
Q 044617           78 AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL-PYHDSTLSHHGCNLCPSNLCKGF  156 (265)
Q Consensus        78 e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~-~~~~~~~kp~~~~~~~~~~~K~~  156 (265)
                      ++++.|+++|++++++||+....++.+++.+|+..+|...+..    . ++.++.. .......||           |+.
T Consensus       185 ~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~~l~~----~-d~~~tg~~~~~~~~~kp-----------k~~  248 (335)
T 3n28_A          185 ELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSNTLEI----V-SGKLTGQVLGEVVSAQT-----------KAD  248 (335)
T ss_dssp             HHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE----E-TTEEEEEEESCCCCHHH-----------HHH
T ss_pred             HHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEeeeeEe----e-CCeeeeeecccccChhh-----------hHH
Confidence            9999999999999999999999999999999998776654432    1 2222211 111112234           999


Q ss_pred             HHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHHH
Q 044617          157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIG  235 (265)
Q Consensus       157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~  235 (265)
                      .++.+++++|++++++++|||+.||+.|++++|. ++++  .+.+   .+++.   ++..+ ..+++.+|...|+..+.
T Consensus       249 ~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~-~va~--~~~~---~~~~~---a~~v~-~~~~l~~v~~~L~~~l~  317 (335)
T 3n28_A          249 ILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGL-GVAY--HAKP---KVEAK---AQTAV-RFAGLGGVVCILSAALV  317 (335)
T ss_dssp             HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSE-EEEE--SCCH---HHHTT---SSEEE-SSSCTHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCC-eEEe--CCCH---HHHhh---CCEEE-ecCCHHHHHHHHHhHHH
Confidence            9999999999999999999999999999977554 3343  2222   22222   22333 56889999999988764

>2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae}

Probab=99.79  E-value=7.4e-20  Score=153.08  Aligned_cols=108  Identities=6%  Similarity=-0.054  Sum_probs=86.8

Q ss_pred             cCCCCChhHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           68 RQCPLDSHVAAAIKSAHSL-GCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~-g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      ....++||+.++|+.|+++ |++++++|++....+...++.+++. .|+.+++.+              .....||    
T Consensus       111 ~~~~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~-~f~~i~~~~--------------~~~~~kp----  171 (275)
T 2qlt_A          111 EHSIEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIK-RPEYFITAN--------------DVKQGKP----  171 (275)
T ss_dssp             TTCEECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCC-CCSSEECGG--------------GCSSCTT----
T ss_pred             cCCCcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCC-ccCEEEEcc--------------cCCCCCC----
Confidence            3456789999999999999 9999999999999999999999886 366666641              1112344    


Q ss_pred             ccCCCCchHHHHHHHHHhcCC-------CCceEEEEcCCCCCcccccCCCCCCeeeecCCCch
Q 044617          147 LCPSNLCKGFVLDHVCTSFGC-------GKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPL  202 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi-------~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~  202 (265)
                             |+..+..+++++|+       +++++++|||+.||+.||+++|...+.+. ++...
T Consensus       172 -------~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~v~-~~~~~  226 (275)
T 2qlt_A          172 -------HPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVGIA-TTFDL  226 (275)
T ss_dssp             -------SSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEEES-SSSCH
T ss_pred             -------ChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEEEC-CCCCH
Confidence                   89999999999999       99999999999999999988776545544 34443

>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}

Probab=99.77  E-value=5.4e-20  Score=137.34  Aligned_cols=99  Identities=6%  Similarity=-0.024  Sum_probs=84.5

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCC
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSN  151 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~  151 (265)
                      ++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+.+++..              .....||         
T Consensus        19 ~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i~~~~--------------~~~~~Kp---------   75 (137)
T 2pr7_A           19 DQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVDKVLLSG--------------ELGVEKP---------   75 (137)
T ss_dssp             HHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSSEEEEHH--------------HHSCCTT---------
T ss_pred             cCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhccEEEEec--------------cCCCCCC---------
Confidence            46899999999999999999999999999999999999999999888741              1122455         


Q ss_pred             CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeee
Q 044617          152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVM  195 (265)
Q Consensus       152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~  195 (265)
                        ++..++.+++++|++++++++|||+.+|+.+|+++|...+.+
T Consensus        76 --~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~~i~~  117 (137)
T 2pr7_A           76 --EEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLVGVYY  117 (137)
T ss_dssp             --SHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCEEEEC
T ss_pred             --CHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCEEEEe
Confidence              789999999999999999999999999999998877644433

>2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19

Probab=99.76  E-value=2.7e-19  Score=144.70  Aligned_cols=143  Identities=11%  Similarity=0.054  Sum_probs=96.5

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCH---------------HHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQ---------------FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~---------------~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...++||+.++|+.|+++|++++|+||+..               ..+...++.+|+.  |+.++......  .|.+...
T Consensus        54 ~~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--~~~~~~~~~~~--~g~~~~~  129 (218)
T 2o2x_A           54 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHE--AGVGPLA  129 (218)
T ss_dssp             GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCT--TCCSTTC
T ss_pred             cCeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCc--eeeEEEeecCC--CCceeec
Confidence            467899999999999999999999999987               7888899999975  55544321000  0000000


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCee
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLI  213 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (265)
                      .......||           ++.+++.+++++|+++++++||||+.+|+.+|+++|...++++.+|........   ..+
T Consensus       130 ~~~~~~~KP-----------~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~---~~~  195 (218)
T 2o2x_A          130 IPDHPMRKP-----------NPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDGEAAVQPGFA---IRP  195 (218)
T ss_dssp             CSSCTTSTT-----------SCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETCCCEEETTEE---EEE
T ss_pred             ccCCccCCC-----------CHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCEeEEEecCCCCccccc---CCC
Confidence            011122344           889999999999999999999999999999999988766144444443222110   112


Q ss_pred             eEEEEeCCCHHHHHHHHHH
Q 044617          214 KAKVHEWSSAEELKKILLH  232 (265)
Q Consensus       214 ~~~~~~~~~~~el~~~l~~  232 (265)
                      +..   ++++.||.++|.+
T Consensus       196 ~~~---i~~l~el~~~l~~  211 (218)
T 2o2x_A          196 LRD---SSELGDLLAAIET  211 (218)
T ss_dssp             ESS---HHHHHHHHHHHHH
T ss_pred             CEe---cccHHHHHHHHHH
Confidence            222   3677777766654

>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*

Probab=99.75  E-value=5.2e-19  Score=160.24  Aligned_cols=108  Identities=8%  Similarity=0.107  Sum_probs=83.7

Q ss_pred             HHHhcCCCCChhHHHHHHHHHHcCCcEEEEeCC--CHHHHHHHHHhc--CcccccceEEecCceecCCCceEEeeccccc
Q 044617           64 ANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDA--NQFYIETIMEHH--GLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        64 ~~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~--~~~~i~~~l~~~--gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                      ........++||+.++|+.|+++|++++|+||+  ........+...  |+..+|+.+++.+              ....
T Consensus        93 ~~~~~~~~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~fd~i~~~~--------------~~~~  158 (555)
T 3i28_A           93 DKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIESC--------------QVGM  158 (555)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEHH--------------HHTC
T ss_pred             HHhHhhcCcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhheeEEEecc--------------ccCC
Confidence            344456788999999999999999999999998  222222223332  7778899988852              2233


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                      .||           ++.+++.+++++|++|++|++|||+.+|+.+|+++|+..+.+.
T Consensus       159 ~KP-----------~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~~~  204 (555)
T 3i28_A          159 VKP-----------EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ  204 (555)
T ss_dssp             CTT-----------CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEECS
T ss_pred             CCC-----------CHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEEEC
Confidence            466           8999999999999999999999999999999988777655443

>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A

Probab=99.73  E-value=1.3e-18  Score=143.66  Aligned_cols=130  Identities=11%  Similarity=0.002  Sum_probs=90.8

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccce---EEecCceecCCCceEEeeccccccCCCccccc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE---IYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~---i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      .++++.++++.++ +|+++ ++||.........+...++..+|+.   +++.              ......||      
T Consensus       123 ~~~~~~~~l~~l~-~~~~~-i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~Kp------  180 (259)
T 2ho4_A          123 HYQLLNQAFRLLL-DGAPL-IAIHKARYYKRKDGLALGPGPFVTALEYATDT--------------KAMVVGKP------  180 (259)
T ss_dssp             BHHHHHHHHHHHH-TTCCE-EESCCCSEEEETTEEEECSHHHHHHHHHHHTC--------------CCEECSTT------
T ss_pred             CHHHHHHHHHHHH-CCCEE-EEECCCCcCcccCCcccCCcHHHHHHHHHhCC--------------CceEecCC------
Confidence            6789999999999 79999 9999876655544555666666542   2221              01112345      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                           |+.+++.+++++|++++++++|||+. ||+.+|+++|...+.+..+.+....... ....++..+   +++.||.
T Consensus       181 -----~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~i~v~~g~~~~~~~~~-~~~~~~~~~---~~l~~l~  251 (259)
T 2ho4_A          181 -----EKTFFLEALRDADCAPEEAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEK-INPPPYLTC---ESFPHAV  251 (259)
T ss_dssp             -----SHHHHHHHGGGGTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCTTGGGG-SSSCCSEEE---SCHHHHH
T ss_pred             -----CHHHHHHHHHHcCCChHHEEEECCCcHHHHHHHHHCCCcEEEECCCCCCcccccc-cCCCCCEEE---CCHHHHH
Confidence                 89999999999999999999999998 9999999988876666543232222211 012344556   8999998


Q ss_pred             HHHHH
Q 044617          228 KILLH  232 (265)
Q Consensus       228 ~~l~~  232 (265)
                      ++|.+
T Consensus       252 ~~l~~  256 (259)
T 2ho4_A          252 DHILQ  256 (259)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87654

>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}

Probab=99.72  E-value=2.9e-18  Score=132.12  Aligned_cols=86  Identities=14%  Similarity=0.168  Sum_probs=73.9

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      .+.|++.++|+.|+++|++++|+||+....+...++.+|+..+|+.                       .||        
T Consensus        36 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~-----------------------~kp--------   84 (162)
T 2p9j_A           36 VFNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEEIYTG-----------------------SYK--------   84 (162)
T ss_dssp             EEEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCEEEEC-----------------------C----------
T ss_pred             eecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHhhccC-----------------------CCC--------
Confidence            3457889999999999999999999999999999999998654421                       134        


Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                         |+..++.++++++++++++++|||+.+|+.+|+++|.
T Consensus        85 ---~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~  121 (162)
T 2p9j_A           85 ---KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGF  121 (162)
T ss_dssp             ---CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSE
T ss_pred             ---CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence               8999999999999999999999999999999977555

>2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A*

Probab=99.72  E-value=1.8e-18  Score=135.41  Aligned_cols=108  Identities=12%  Similarity=0.167  Sum_probs=82.5

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCC---------------CHHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDA---------------NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~---------------~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...++||+.++|+.|+++|++++|+||+               ....+...++.+|+.  |+.++.+....         
T Consensus        40 ~~~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~v~~s~~~~---------  108 (176)
T 2fpr_A           40 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLP---------  108 (176)
T ss_dssp             GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCG---------
T ss_pred             HCcCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC--eeEEEEcCCCC---------
Confidence            5688999999999999999999999998               677888999999987  77775320000         


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      .......||           ++.+++.+++++|++|++++||||+.+|+.+|+++|...+.+...
T Consensus       109 ~~~~~~~KP-----------~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~~~  162 (176)
T 2fpr_A          109 ADECDCRKP-----------KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE  162 (176)
T ss_dssp             GGCCSSSTT-----------SCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             cccccccCC-----------CHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEcCC
Confidence            011223456           789999999999999999999999999999999888766665543

>1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10

Probab=99.71  E-value=1.3e-16  Score=130.01  Aligned_cols=172  Identities=15%  Similarity=0.118  Sum_probs=112.4

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI   80 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l   80 (265)
                      ||+|+|+||+||||++++.                                                   .+.+.+.+.|
T Consensus         1 Mm~kli~~DlDGTLl~~~~---------------------------------------------------~i~~~~~~al   29 (231)
T 1wr8_A            1 MKIKAISIDIDGTITYPNR---------------------------------------------------MIHEKALEAI   29 (231)
T ss_dssp             -CCCEEEEESTTTTBCTTS---------------------------------------------------CBCHHHHHHH
T ss_pred             CceeEEEEECCCCCCCCCC---------------------------------------------------cCCHHHHHHH
Confidence            7789999999999999832                                                   4668889999


Q ss_pred             HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCce------------------------------
Q 044617           81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRL------------------------------  130 (265)
Q Consensus        81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~------------------------------  130 (265)
                      +.++++|++++++|++....+..+++.+|+..+  .+..+...+-..+..                              
T Consensus        30 ~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~--~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~  107 (231)
T 1wr8_A           30 RRAESLGIPIMLVTGNTVQFAEAASILIGTSGP--VVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPNARTSYTMP  107 (231)
T ss_dssp             HHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSC--EEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTTCCBCTTGG
T ss_pred             HHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCe--EEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCCCceEEecCC
Confidence            999999999999999998888888888876532  222222111000100                              


Q ss_pred             ------EEee---c--------------cccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          131 ------RILP---Y--------------HDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       131 ------~~~~---~--------------~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                            .+..   .              ......+...++.+.+.+|+.+++.+++++|++++++++|||+.||+.+++.
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~  187 (231)
T 1wr8_A          108 DRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKV  187 (231)
T ss_dssp             GCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSGGGHHHHHH
T ss_pred             CceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHH
Confidence                  0000   0              0000011223556788999999999999999999999999999999999976


Q ss_pred             CCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH--HHHHHHHHHHh
Q 044617          188 LRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE--LKKILLHLIGA  236 (265)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e--l~~~l~~~~~~  236 (265)
                      +|.   .++- +.+... +++.   ++..+   .+..+  +.+.|++++..
T Consensus       188 ag~---~v~~-~~~~~~-~~~~---a~~v~---~~~~e~Gv~~~l~~~~~~  227 (231)
T 1wr8_A          188 VGY---KVAV-AQAPKI-LKEN---ADYVT---KKEYGEGGAEAIYHILEK  227 (231)
T ss_dssp             SSE---EEEC-TTSCHH-HHTT---CSEEC---SSCHHHHHHHHHHHHHHH
T ss_pred             cCC---eEEe-cCCCHH-HHhh---CCEEe---cCCCcchHHHHHHHHHHh
Confidence            443   3332 222222 3322   23333   44433  88888887643

>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A

Probab=99.71  E-value=3e-18  Score=135.62  Aligned_cols=77  Identities=23%  Similarity=0.269  Sum_probs=68.4

Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                      +|+.|+++|++++|+||+....++.+++++|+..+|+.+                       +           +|+..+
T Consensus        54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~~f~~~-----------------------~-----------~K~~~~   99 (189)
T 3mn1_A           54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEHLFQGR-----------------------E-----------DKLVVL   99 (189)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSEEECSC-----------------------S-----------CHHHHH
T ss_pred             HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHHHhcCc-----------------------C-----------ChHHHH
Confidence            899999999999999999999999999999987654422                       1           299999


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                      +.+++++|++++++++|||+.||+.+++++|
T Consensus       100 ~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag  130 (189)
T 3mn1_A          100 DKLLAELQLGYEQVAYLGDDLPDLPVIRRVG  130 (189)
T ss_dssp             HHHHHHHTCCGGGEEEEECSGGGHHHHHHSS
T ss_pred             HHHHHHcCCChhHEEEECCCHHHHHHHHHCC
Confidence            9999999999999999999999999996644

>3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.71  E-value=6.8e-17  Score=135.86  Aligned_cols=86  Identities=13%  Similarity=0.109  Sum_probs=59.4

Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                      ++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.   +++.++-.+. ... +++.   ++... .-.+.+-
T Consensus       195 ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~---ag~~vam~na-~~~-~k~~---Ad~v~-~s~~edG  265 (290)
T 3dnp_A          195 NIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIEL---AGLGVAMGNA-VPE-IKRK---ADWVT-RSNDEQG  265 (290)
T ss_dssp             EEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHH---SSEEEECTTS-CHH-HHHH---SSEEC-CCTTTTH
T ss_pred             EEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHh---cCCEEEecCC-cHH-HHHh---cCEEC-CCCCccH
Confidence            556889999999999999999999999999999999999965   4556654322 222 3221   22222 1122233


Q ss_pred             HHHHHHHHHHhhccc
Q 044617          226 LKKILLHLIGAISIK  240 (265)
Q Consensus       226 l~~~l~~~~~~~~~~  240 (265)
                      +.+.|++++......
T Consensus       266 v~~~i~~~~~~~~~~  280 (290)
T 3dnp_A          266 VAYMMKEYFRMQQRK  280 (290)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhcCcc
Confidence            999999988764333

>1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A

Probab=99.71  E-value=2.2e-17  Score=134.36  Aligned_cols=141  Identities=15%  Similarity=0.126  Sum_probs=103.8

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI   80 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l   80 (265)
                      ||+|+|+||+||||++++                                                   ..+.+.+.+.|
T Consensus         3 mm~kli~~DlDGTLl~~~---------------------------------------------------~~i~~~~~~~l   31 (227)
T 1l6r_A            3 HMIRLAAIDVDGNLTDRD---------------------------------------------------RLISTKAIESI   31 (227)
T ss_dssp             CCCCEEEEEHHHHSBCTT---------------------------------------------------SCBCHHHHHHH
T ss_pred             cceEEEEEECCCCCcCCC---------------------------------------------------CcCCHHHHHHH
Confidence            678999999999999872                                                   25678899999


Q ss_pred             HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecC-CCceE-Eee--------------------c---
Q 044617           81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDE-QGRLR-ILP--------------------Y---  135 (265)
Q Consensus        81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~-~~~~~-~~~--------------------~---  135 (265)
                      ++|+++|++++++|++....+..+++.+++..+  .|..+...+-+ ++... ...                    +   
T Consensus        32 ~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~--~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~~~~~~~~~~~  109 (227)
T 1l6r_A           32 RSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP--VFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNR  109 (227)
T ss_dssp             HHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSC--EEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGGGG
T ss_pred             HHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCe--EEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHHhcCCcccccc
Confidence            999999999999999999999999999887643  33334333221 22211 000                    0   


Q ss_pred             --------------------------cccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          136 --------------------------HDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       136 --------------------------~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                                                ......+...++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.  
T Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~nD~~m~~~--  187 (227)
T 1l6r_A          110 WREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQL--  187 (227)
T ss_dssp             GCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHTS--
T ss_pred             ceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcHHhHHHHHH--
Confidence                                      0000112234566889999999999999999999999999999999999955  


Q ss_pred             CCCeeeec
Q 044617          190 DCDFVMPR  197 (265)
Q Consensus       190 ~~~~~~~~  197 (265)
                       +++.++-
T Consensus       188 -ag~~va~  194 (227)
T 1l6r_A          188 -PVRKACP  194 (227)
T ss_dssp             -SSEEEEC
T ss_pred             -cCceEEe
Confidence             4445543

>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}

Probab=99.71  E-value=4.9e-18  Score=132.91  Aligned_cols=81  Identities=15%  Similarity=0.262  Sum_probs=69.5

Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                      +|+.|+++|++++|+||+....++.+++.+|+.     ++..              .     +|           |+..+
T Consensus        47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~-----~~~~--------------~-----~~-----------k~~~l   91 (176)
T 3mmz_A           47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP-----VLHG--------------I-----DR-----------KDLAL   91 (176)
T ss_dssp             HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----EEES--------------C-----SC-----------HHHHH
T ss_pred             HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----eEeC--------------C-----CC-----------hHHHH
Confidence            899999999999999999999999999999975     3331              1     23           99999


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      +.+++++|++++++++|||+.||+.+++++   ++.++-
T Consensus        92 ~~~~~~~~~~~~~~~~vGD~~nD~~~~~~a---g~~v~~  127 (176)
T 3mmz_A           92 KQWCEEQGIAPERVLYVGNDVNDLPCFALV---GWPVAV  127 (176)
T ss_dssp             HHHHHHHTCCGGGEEEEECSGGGHHHHHHS---SEEEEC
T ss_pred             HHHHHHcCCCHHHEEEEcCCHHHHHHHHHC---CCeEEC
Confidence            999999999999999999999999999664   445543

>2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14

Probab=99.71  E-value=6.8e-20  Score=149.76  Aligned_cols=72  Identities=14%  Similarity=0.136  Sum_probs=50.6

Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                      +.+|+.+++.+++++|++++++++|||+ .||+.|++++|...+.+.. |......+......++..+   +++.||
T Consensus       175 ~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~-g~~~~~~~~~~~~~~~~v~---~~~~el  247 (250)
T 2c4n_A          175 GKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLS-GVSSLDDIDSMPFRPSWIY---PSVAEI  247 (250)
T ss_dssp             STTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESS-SSCCGGGGSSCSSCCSEEE---SSGGGC
T ss_pred             CCCCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECC-CCCChhhhhhcCCCCCEEE---CCHHHh
Confidence            4459999999999999999999999999 7999999887765454544 4433222321112344555   677665

>4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A

Probab=99.71  E-value=8.2e-17  Score=134.62  Aligned_cols=81  Identities=14%  Similarity=0.182  Sum_probs=56.5

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.   +++.++-.+ +... +++.   ++... .-++..
T Consensus       189 ~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~---ag~~vam~n-a~~~-~k~~---A~~v~-~~~~e~  259 (279)
T 4dw8_A          189 LELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKF---AGMGVAMGN-AQEP-VKKA---ADYIT-LTNDED  259 (279)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHH---SSEEEECTT-SCHH-HHHH---CSEEC-CCGGGT
T ss_pred             EEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHH---cCcEEEcCC-CcHH-HHHh---CCEEc-CCCCCc
Confidence            3566889999999999999999999999999999999999965   456666432 2222 2221   22222 112233


Q ss_pred             HHHHHHHHHH
Q 044617          225 ELKKILLHLI  234 (265)
Q Consensus       225 el~~~l~~~~  234 (265)
                      -+.+.|++++
T Consensus       260 Gv~~~i~~~~  269 (279)
T 4dw8_A          260 GVAEAIERIF  269 (279)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHH
Confidence            3888888765

>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}

Probab=99.70  E-value=4.5e-18  Score=136.81  Aligned_cols=82  Identities=15%  Similarity=0.248  Sum_probs=70.6

Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                      +|+.|+++|++++|+|++....++.+++.+|+..+|..+                       +|           |+..+
T Consensus        84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~~f~~~-----------------------k~-----------K~~~l  129 (211)
T 3ij5_A           84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGITHLYQGQ-----------------------SD-----------KLVAY  129 (211)
T ss_dssp             HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCEEECSC-----------------------SS-----------HHHHH
T ss_pred             HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCchhhccc-----------------------CC-----------hHHHH
Confidence            899999999999999999999999999999986554321                       23           99999


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      +.+++++|++++++++|||+.||+.++++   +++.++-
T Consensus       130 ~~~~~~lg~~~~~~~~vGDs~nDi~~~~~---ag~~~a~  165 (211)
T 3ij5_A          130 HELLATLQCQPEQVAYIGDDLIDWPVMAQ---VGLSVAV  165 (211)
T ss_dssp             HHHHHHHTCCGGGEEEEECSGGGHHHHTT---SSEEEEC
T ss_pred             HHHHHHcCcCcceEEEEcCCHHHHHHHHH---CCCEEEe
Confidence            99999999999999999999999999965   4445543

>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*

Probab=99.70  E-value=9.2e-18  Score=131.74  Aligned_cols=84  Identities=13%  Similarity=0.106  Sum_probs=72.7

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCC
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSN  151 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~  151 (265)
                      +.++..++|+.|+++|++++++||+....+..+++.+|+..+|+.                       .+|         
T Consensus        36 ~~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~-----------------------~k~---------   83 (180)
T 1k1e_A           36 FHVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKLFFLG-----------------------KLE---------   83 (180)
T ss_dssp             EEHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCEEEES-----------------------CSC---------
T ss_pred             eccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCceeecC-----------------------CCC---------
Confidence            456777899999999999999999999999999999998654321                       123         


Q ss_pred             CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                        |+..++.+++++|++++++++|||+.||+.+++++|
T Consensus        84 --k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag  119 (180)
T 1k1e_A           84 --KETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACG  119 (180)
T ss_dssp             --HHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS
T ss_pred             --cHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcC
Confidence              999999999999999999999999999999996644

>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0

Probab=99.70  E-value=4.8e-17  Score=136.06  Aligned_cols=51  Identities=16%  Similarity=0.160  Sum_probs=41.7

Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      ..++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.   +++.++-
T Consensus       188 ~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~---ag~~vam  238 (279)
T 3mpo_A          188 FIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKY---AGLGVAM  238 (279)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHH---STEECBC
T ss_pred             eEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHh---cCceeec
Confidence            34667889999999999999999999999999999999999965   4455553

>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}

Probab=99.69  E-value=1.6e-17  Score=132.06  Aligned_cols=83  Identities=16%  Similarity=0.219  Sum_probs=70.5

Q ss_pred             HHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHH
Q 044617           78 AAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFV  157 (265)
Q Consensus        78 e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~  157 (265)
                      ..|+.|+++|++++|+||+....+..+++.+|+..+|..                  .     ||           |+..
T Consensus        59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~~~~~------------------~-----k~-----------k~~~  104 (195)
T 3n07_A           59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISLIYQG------------------Q-----DD-----------KVQA  104 (195)
T ss_dssp             HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCEEECS------------------C-----SS-----------HHHH
T ss_pred             HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcEEeeC------------------C-----CC-----------cHHH
Confidence            469999999999999999999999999999998644321                  1     34           9999


Q ss_pred             HHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          158 LDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       158 i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      ++.+++++|++++++++|||+.||+.++++   +++.++-
T Consensus       105 ~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~---ag~~va~  141 (195)
T 3n07_A          105 YYDICQKLAIAPEQTGYIGDDLIDWPVMEK---VALRVCV  141 (195)
T ss_dssp             HHHHHHHHCCCGGGEEEEESSGGGHHHHTT---SSEEEEC
T ss_pred             HHHHHHHhCCCHHHEEEEcCCHHHHHHHHH---CCCEEEE
Confidence            999999999999999999999999999965   4455554

>3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans}

Probab=99.68  E-value=8.3e-17  Score=136.52  Aligned_cols=81  Identities=14%  Similarity=0.274  Sum_probs=58.5

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.   +++.++-.+ +... +++.   ++...   .+..
T Consensus       220 ~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~---ag~~vam~n-a~~~-~k~~---Ad~v~---~~~~  288 (304)
T 3l7y_A          220 IDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKL---AKYSYAMAN-APKN-VKAA---ANYQA---KSND  288 (304)
T ss_dssp             EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHH---CTEEEECTT-SCHH-HHHH---CSEEC---CCGG
T ss_pred             EEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHh---cCCeEEcCC-cCHH-HHHh---ccEEc---CCCC
Confidence            3566889999999999999999999999999999999999965   455665432 2222 3221   22322   3333


Q ss_pred             H--HHHHHHHHHHh
Q 044617          225 E--LKKILLHLIGA  236 (265)
Q Consensus       225 e--l~~~l~~~~~~  236 (265)
                      |  +...|++++.+
T Consensus       289 edGv~~~l~~~~~~  302 (304)
T 3l7y_A          289 ESGVLDVIDNYLAS  302 (304)
T ss_dssp             GTHHHHHHHHHHHC
T ss_pred             cchHHHHHHHHHHh
Confidence            3  99999988764

>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*

Probab=99.68  E-value=1.9e-17  Score=127.76  Aligned_cols=78  Identities=18%  Similarity=0.214  Sum_probs=68.5

Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                      +|+.|+++|++++++||+....++.+++++|+..+|..                       .||           |+..+
T Consensus        39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~~~~-----------------------~kp-----------k~~~~   84 (164)
T 3e8m_A           39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYLFQG-----------------------VVD-----------KLSAA   84 (164)
T ss_dssp             HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEEECS-----------------------CSC-----------HHHHH
T ss_pred             HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEeecc-----------------------cCC-----------hHHHH
Confidence            79999999999999999999999999999998654321                       134           99999


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                      +.+++++|+++++++||||+.||+.+++++|.
T Consensus        85 ~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~  116 (164)
T 3e8m_A           85 EELCNELGINLEQVAYIGDDLNDAKLLKRVGI  116 (164)
T ss_dssp             HHHHHHHTCCGGGEEEECCSGGGHHHHTTSSE
T ss_pred             HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence            99999999999999999999999999966443

>3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp}

Probab=99.66  E-value=5.1e-16  Score=130.45  Aligned_cols=82  Identities=17%  Similarity=0.122  Sum_probs=56.4

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeE-EEEeCCCH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKA-KVHEWSSA  223 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  223 (265)
                      .++.+.+.+|+.+++.+++.+|++++++++|||+.||+.|++.   +++.++-.+. ... +++.   ++. .+..-++.
T Consensus       201 ~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~---ag~~vAm~Na-~~~-vk~~---A~~~~v~~sn~e  272 (285)
T 3pgv_A          201 LEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSM---AGKGCIMANA-HQR-LKDL---HPELEVIGSNAD  272 (285)
T ss_dssp             EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHH---SSEEEECTTS-CHH-HHHH---CTTSEECCCGGG
T ss_pred             EEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHh---cCCEEEccCC-CHH-HHHh---CCCCEecccCCc
Confidence            3566889999999999999999999999999999999999955   4556664432 222 2211   111 12111233


Q ss_pred             HHHHHHHHHHH
Q 044617          224 EELKKILLHLI  234 (265)
Q Consensus       224 ~el~~~l~~~~  234 (265)
                      +-+...|++++
T Consensus       273 dGva~~i~~~~  283 (285)
T 3pgv_A          273 DAVPRYLRKLY  283 (285)
T ss_dssp             THHHHHHHHHH
T ss_pred             chHHHHHHHHh
Confidence            33888888875

>2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A

Probab=99.66  E-value=3.3e-16  Score=129.56  Aligned_cols=80  Identities=14%  Similarity=0.034  Sum_probs=55.0

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.   +++.++-. .+... +++..   +... .-.+.+
T Consensus       175 ~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~---ag~~vam~-na~~~-~k~~A---~~v~-~~~~~d  245 (258)
T 2pq0_A          175 TDVLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSF---VGTGVAMG-NAHEE-VKRVA---DFVT-KPVDKE  245 (258)
T ss_dssp             EEEEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHH---SSEEEEET-TCCHH-HHHTC---SEEE-CCGGGT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHh---CCcEEEeC-CCcHH-HHHhC---CEEe-CCCCcc
Confidence            3567889999999999999999999999999999999999965   44445432 22222 33322   2333 112223


Q ss_pred             HHHHHHHHH
Q 044617          225 ELKKILLHL  233 (265)
Q Consensus       225 el~~~l~~~  233 (265)
                      -+...|+++
T Consensus       246 Gva~~i~~~  254 (258)
T 2pq0_A          246 GIWYGLKQL  254 (258)
T ss_dssp             HHHHHHHHT
T ss_pred             hHHHHHHHh
Confidence            377777764

>3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0

Probab=99.66  E-value=3.1e-16  Score=130.51  Aligned_cols=80  Identities=18%  Similarity=0.227  Sum_probs=55.2

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.   +++.++-.+ +... +++   .++... .-.+.+
T Consensus       192 ~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~---ag~~vam~n-a~~~-~k~---~A~~v~-~~~~ed  262 (274)
T 3fzq_A          192 YEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQA---SDVTIAMKN-SHQQ-LKD---IATSIC-EDIFDN  262 (274)
T ss_dssp             EEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHT---CSEEEEETT-SCHH-HHH---HCSEEE-CCGGGT
T ss_pred             EEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHh---cCceEEecC-ccHH-HHH---hhhhee-CCCchh
Confidence            3567889999999999999999999999999999999999965   445665432 2222 322   123333 112222


Q ss_pred             HHHHHHHHH
Q 044617          225 ELKKILLHL  233 (265)
Q Consensus       225 el~~~l~~~  233 (265)
                      -+...|+++
T Consensus       263 Gv~~~l~~~  271 (274)
T 3fzq_A          263 GIYKELKRR  271 (274)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            388877764

>2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A

Probab=99.65  E-value=2.5e-18  Score=138.43  Aligned_cols=98  Identities=15%  Similarity=0.035  Sum_probs=72.3

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCC
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSN  151 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~  151 (265)
                      +.|++.++|+.|+++|++++|+||+....+...++.  +.++|+.++.+....           .....||         
T Consensus        89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~--l~~~f~~i~~~~~~~-----------~~~~~KP---------  146 (211)
T 2b82_A           89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKT--LADNFHIPATNMNPV-----------IFAGDKP---------  146 (211)
T ss_dssp             ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHH--HHHHTTCCTTTBCCC-----------EECCCCT---------
T ss_pred             CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH--HHHhcCccccccchh-----------hhcCCCC---------
Confidence            478999999999999999999999977665555555  445565543210000           0011345         


Q ss_pred             CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          152 LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                        ++..+..+++++|+    ++||||+.+|+.+|+++|+..+.+..
T Consensus       147 --~p~~~~~~~~~~g~----~l~VGDs~~Di~aA~~aG~~~i~v~~  186 (211)
T 2b82_A          147 --GQNTKSQWLQDKNI----RIFYGDSDNDITAARDVGARGIRILR  186 (211)
T ss_dssp             --TCCCSHHHHHHTTE----EEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred             --CHHHHHHHHHHCCC----EEEEECCHHHHHHHHHCCCeEEEEec
Confidence              67889999999987    99999999999999998877666654

>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0

Probab=99.64  E-value=1.2e-16  Score=126.56  Aligned_cols=77  Identities=19%  Similarity=0.344  Sum_probs=67.8

Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                      .|+.|+++|++++|+||+....+...++.+|+..+|+.+                       ||           |+.++
T Consensus        54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~~~~~~-----------------------kp-----------k~~~~   99 (191)
T 3n1u_A           54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGITHYYKGQ-----------------------VD-----------KRSAY   99 (191)
T ss_dssp             HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCEEECSC-----------------------SS-----------CHHHH
T ss_pred             HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCccceeCC-----------------------CC-----------hHHHH
Confidence            589999999999999999999999999999986543311                       34           89999


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                      +.+++++|++++++++|||+.||+.+++++|
T Consensus       100 ~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag  130 (191)
T 3n1u_A          100 QHLKKTLGLNDDEFAYIGDDLPDLPLIQQVG  130 (191)
T ss_dssp             HHHHHHHTCCGGGEEEEECSGGGHHHHHHSS
T ss_pred             HHHHHHhCCCHHHEEEECCCHHHHHHHHHCC
Confidence            9999999999999999999999999997644

>3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp}

Probab=99.64  E-value=3e-16  Score=132.00  Aligned_cols=141  Identities=18%  Similarity=0.131  Sum_probs=91.1

Q ss_pred             CCChhHHHHHHHHHHc-CCcEEEEeCC---------------------CHHHHHHHHHhcCcccccceEEecCceecCCC
Q 044617           71 PLDSHVAAAIKSAHSL-GCDLKIVSDA---------------------NQFYIETIMEHHGLLGCFSEIYTNPTYVDEQG  128 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~-g~~~~ivS~~---------------------~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~  128 (265)
                      ...+++.++++.++++ |+++.+.|+.                     ....+...++.+|+..+|..+-.  ...+..+
T Consensus       122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~  199 (289)
T 3gyg_A          122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNP--LAGDPED  199 (289)
T ss_dssp             CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEEECCG--GGTCCTT
T ss_pred             CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEEEccc--cccCCCC
Confidence            5678999999999998 9999999876                     45567777788887654432100  0000001


Q ss_pred             ceEEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhc
Q 044617          129 RLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICS  208 (265)
Q Consensus       129 ~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~  208 (265)
                      ...             .+..+.+.+|+.+++.+++++|++++++++|||+.||+.+++.+|   +.++-.+ +... +..
T Consensus       200 ~~~-------------~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag---~~~~~~~-~~~~-~~~  261 (289)
T 3gyg_A          200 SYD-------------VDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVG---NGYLLKN-ATQE-AKN  261 (289)
T ss_dssp             EEE-------------EEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSS---EEEECTT-CCHH-HHH
T ss_pred             ceE-------------EEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCC---cEEEECC-ccHH-HHH
Confidence            111             122234566999999999999999999999999999999996544   4444322 2222 222


Q ss_pred             CCCeeeEEEEeCCCHHH--HHHHHHHHHHhh
Q 044617          209 NPMLIKAKVHEWSSAEE--LKKILLHLIGAI  237 (265)
Q Consensus       209 ~~~~~~~~~~~~~~~~e--l~~~l~~~~~~~  237 (265)
                      .   ++..+   .+..+  +.+.|++++...
T Consensus       262 ~---a~~v~---~~~~~~gv~~~~~~~~~~~  286 (289)
T 3gyg_A          262 L---HNLIT---DSEYSKGITNTLKKLIGFM  286 (289)
T ss_dssp             H---CCCBC---SSCHHHHHHHHHHHHTCCC
T ss_pred             h---CCEEc---CCCCcCHHHHHHHHHHHHh
Confidence            1   12222   34433  888888877543

>2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A*

Probab=99.64  E-value=1.4e-17  Score=132.07  Aligned_cols=87  Identities=10%  Similarity=0.002  Sum_probs=73.5

Q ss_pred             CCCCChhHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSL-GCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~-g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++|+.|+++ |++++|+||+....+...++.+|+   |+.+++.                           
T Consensus        71 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl---f~~i~~~---------------------------  120 (193)
T 2i7d_A           71 DLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW---VEQHLGP---------------------------  120 (193)
T ss_dssp             TCCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH---HHHHHCH---------------------------
T ss_pred             cCccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc---hhhhcCH---------------------------
Confidence            457899999999999999 999999999999888888998887   5544431                           


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCC----ccccc-CCCCCCeeeec
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGD----FCPTL-KLRDCDFVMPR  197 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~D----i~~a~-~~~~~~~~~~~  197 (265)
                                  .+++++|++|+++++|||+.+|    +.+|+ ++|+..+.+..
T Consensus       121 ------------~~~~~~~~~~~~~~~vgDs~~dD~~~i~~A~~~aG~~~i~~~~  163 (193)
T 2i7d_A          121 ------------QFVERIILTRDKTVVLGDLLIDDKDTVRGQEETPSWEHILFTC  163 (193)
T ss_dssp             ------------HHHTTEEECSCGGGBCCSEEEESSSCCCSSCSSCSSEEEEECC
T ss_pred             ------------HHHHHcCCCcccEEEECCchhhCcHHHhhcccccccceEEEEe
Confidence                        1678899999999999999999    99998 87877666654

>2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens}

Probab=99.64  E-value=1.2e-15  Score=126.10  Aligned_cols=81  Identities=12%  Similarity=0.101  Sum_probs=57.4

Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                      +.+.+|+.+++.+++++|++++++++|||+. ||+.|++++|...+.+..+.+....... ....++..+   +++.||.
T Consensus       187 ~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~a~~aG~~~~~v~~g~~~~~~~~~-~~~~~~~~~---~~~~el~  262 (271)
T 2x4d_A          187 VVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHH-PEVKADGYV---DNLAEAV  262 (271)
T ss_dssp             EESTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEESSTTCCGGGGGC-SSCCCSEEE---SSHHHHH
T ss_pred             eccCCCHHHHHHHHHHhCCCcceEEEECCCcHHHHHHHHHCCCcEEEEcCCCCCchhhcc-cCCCCCEEe---CCHHHHH
Confidence            3456699999999999999999999999998 9999998877654444433232222121 011245556   8999998


Q ss_pred             HHHHHH
Q 044617          228 KILLHL  233 (265)
Q Consensus       228 ~~l~~~  233 (265)
                      ++|.+.
T Consensus       263 ~~l~~~  268 (271)
T 2x4d_A          263 DLLLQH  268 (271)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            877553

>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*

Probab=99.63  E-value=5.1e-17  Score=135.44  Aligned_cols=117  Identities=15%  Similarity=0.153  Sum_probs=87.2

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      .++||+.++|+.|+++|++++++||+....+..+++.+|+..+|+.+++.                              
T Consensus       144 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~~~------------------------------  193 (280)
T 3skx_A          144 RIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLDDYFAEVLPH------------------------------  193 (280)
T ss_dssp             EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCGG------------------------------
T ss_pred             CCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCChhHhHhcCHH------------------------------
Confidence            67899999999999999999999999999999999999998777655442                              


Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHH
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKIL  230 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l  230 (265)
                        .|...++.+.+.+     ++++|||+.||+.|++++|   +.++.++ +... ...   ..+. +...+++.+|..+|
T Consensus       194 --~k~~~~k~~~~~~-----~~~~vGD~~nDi~~~~~Ag---~~va~~~-~~~~-~~~---~a~~-~~~~~~~~~l~~~l  257 (280)
T 3skx_A          194 --EKAEKVKEVQQKY-----VTAMVGDGVNDAPALAQAD---VGIAIGA-GTDV-AVE---TADI-VLVRNDPRDVAAIV  257 (280)
T ss_dssp             --GHHHHHHHHHTTS-----CEEEEECTTTTHHHHHHSS---EEEECSC-CSSS-CCC---SSSE-ECSSCCTHHHHHHH
T ss_pred             --HHHHHHHHHHhcC-----CEEEEeCCchhHHHHHhCC---ceEEecC-CcHH-HHh---hCCE-EEeCCCHHHHHHHH
Confidence              2777888877765     7899999999999997655   4554332 2211 111   1222 22348889998888


Q ss_pred             HHH
Q 044617          231 LHL  233 (265)
Q Consensus       231 ~~~  233 (265)
                      +..
T Consensus       258 ~~~  260 (280)
T 3skx_A          258 ELS  260 (280)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}

Probab=99.63  E-value=1.5e-15  Score=127.39  Aligned_cols=50  Identities=12%  Similarity=0.074  Sum_probs=43.2

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      .++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.   +++.++-
T Consensus       203 ~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~---ag~~vam  252 (283)
T 3dao_A          203 VDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQN---AGISYAV  252 (283)
T ss_dssp             EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHH---SSEEEEE
T ss_pred             EEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHh---CCCEEEc
Confidence            3566889999999999999999999999999999999999965   4445554

>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0

Probab=99.63  E-value=1.6e-15  Score=126.03  Aligned_cols=78  Identities=8%  Similarity=0.057  Sum_probs=56.6

Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhh----cCCCeeeEEEEeCCCHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRIC----SNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~  224 (265)
                      .+.+|+.+++.+++++|++++++++|||+ .||+.+|+++|...+++..+ ......+.    .....++..+   +++.
T Consensus       185 ~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~~~~~g~~~~~v~~g-~~~~~~~~~~~~~~~~~~d~v~---~~~~  260 (268)
T 3qgm_A          185 VGKPSEVIMREALDILGLDAKDVAVVGDQIDVDVAAGKAIGAETVLVLTG-VTTRENLDQMIERHGLKPDYVF---NSLK  260 (268)
T ss_dssp             CSTTSHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSS-SCCTTTHHHHHHHHTCCCSEEE---SSHH
T ss_pred             cCCCCHHHHHHHHHHhCCCchhEEEECCCchHHHHHHHHCCCcEEEECCC-CCCHHHHHhhccccCCCCCEEE---CCHH
Confidence            45668899999999999999999999999 59999999888776666544 33322221    1111345556   8999


Q ss_pred             HHHHHHH
Q 044617          225 ELKKILL  231 (265)
Q Consensus       225 el~~~l~  231 (265)
                      ||.++|+
T Consensus       261 el~~~l~  267 (268)
T 3qgm_A          261 DMVEALE  267 (268)
T ss_dssp             HHHHTC-
T ss_pred             HHHHHHh
Confidence            9987664

>1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10

Probab=99.61  E-value=1.9e-15  Score=126.89  Aligned_cols=81  Identities=9%  Similarity=0.088  Sum_probs=54.9

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.+|   +.++-.+ +... +++.   ++..+ .-.+..
T Consensus       190 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag---~~va~~n-~~~~-~~~~---a~~v~-~~~~~d  260 (282)
T 1rkq_A          190 LEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAG---VGVAVDN-AIPS-VKEV---ANFVT-KSNLED  260 (282)
T ss_dssp             EEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS---EEEECTT-SCHH-HHHH---CSEEC-CCTTTT
T ss_pred             EEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCC---cEEEecC-CcHH-HHhh---CCEEe-cCCCcc
Confidence            356688999999999999999999999999999999999996544   4444322 2222 2221   22322 112233


Q ss_pred             HHHHHHHHHH
Q 044617          225 ELKKILLHLI  234 (265)
Q Consensus       225 el~~~l~~~~  234 (265)
                      .+.+.|++++
T Consensus       261 GV~~~l~~~~  270 (282)
T 1rkq_A          261 GVAFAIEKYV  270 (282)
T ss_dssp             HHHHHHHHHT
T ss_pred             hHHHHHHHHH
Confidence            4888787764

>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}

Probab=99.61  E-value=9.2e-16  Score=118.79  Aligned_cols=74  Identities=14%  Similarity=0.104  Sum_probs=61.4

Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHH--hcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIME--HHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGF  156 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~--~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~  156 (265)
                      .|+.|+++|++++|+||+  ..+..+++  .+|+. +    +..              .                .+|+.
T Consensus        44 ~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~-~----~~g--------------~----------------~~K~~   86 (168)
T 3ewi_A           44 GISLLKKSGIEVRLISER--ACSKQTLSALKLDCK-T----EVS--------------V----------------SDKLA   86 (168)
T ss_dssp             HHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC-E----ECS--------------C----------------SCHHH
T ss_pred             HHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE-E----EEC--------------C----------------CChHH
Confidence            789999999999999999  67888888  55653 2    221              0                12999


Q ss_pred             HHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                      .++.+++++|+++++++||||+.||+.+++++|
T Consensus        87 ~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag  119 (168)
T 3ewi_A           87 TVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVG  119 (168)
T ss_dssp             HHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSS
T ss_pred             HHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCC
Confidence            999999999999999999999999999996644

>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*

Probab=99.61  E-value=1e-15  Score=127.32  Aligned_cols=79  Identities=15%  Similarity=0.105  Sum_probs=57.7

Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                      +..+.+|+.+++.+++++|++++++++|||+ .||+.||+++|...+.+ .+|+.....+......++..+   +++.||
T Consensus       191 ~~~~kpk~~~~~~~~~~lgi~~~e~i~iGD~~~nDi~~a~~aG~~~i~v-~~g~~~~~~~~~~~~~~~~~i---~~l~el  266 (271)
T 1vjr_A          191 LIAGKPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILV-LTGETTPEDLERAETKPDFVF---KNLGEL  266 (271)
T ss_dssp             EECSTTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEE-SSSSCCHHHHHHCSSCCSEEE---SSHHHH
T ss_pred             ccCCCCCHHHHHHHHHHhCCCCceEEEECCCcHHHHHHHHHcCCeEEEE-CCCCCCHHHHhhcCCCCCEEE---CCHHHH
Confidence            4456779999999999999999999999999 59999999877755444 445443332322111345556   899998


Q ss_pred             HHHH
Q 044617          227 KKIL  230 (265)
Q Consensus       227 ~~~l  230 (265)
                      .++|
T Consensus       267 ~~~l  270 (271)
T 1vjr_A          267 AKAV  270 (271)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8765

>3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0

Probab=99.60  E-value=1.7e-15  Score=125.78  Aligned_cols=80  Identities=15%  Similarity=0.091  Sum_probs=55.5

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.   +++.++-.+ +... +++..   +... .-++.+
T Consensus       186 ~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~---ag~~vam~n-a~~~-~k~~A---d~v~-~~~~ed  256 (268)
T 3r4c_A          186 ADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKA---AGIGVAMGN-ASEK-VQSVA---DFVT-DTVDNS  256 (268)
T ss_dssp             EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHH---SSEEEECTT-SCHH-HHHTC---SEEC-CCTTTT
T ss_pred             EEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHh---CCCeEEeCC-CcHH-HHHhc---CEee-CCCCcC
Confidence            3566889999999999999999999999999999999999955   455666443 2222 33222   2222 112233


Q ss_pred             HHHHHHHHH
Q 044617          225 ELKKILLHL  233 (265)
Q Consensus       225 el~~~l~~~  233 (265)
                      -+.+.|+++
T Consensus       257 Gv~~~l~~~  265 (268)
T 3r4c_A          257 GLYKALKHF  265 (268)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            388777764

>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A

Probab=99.60  E-value=5.7e-15  Score=122.58  Aligned_cols=73  Identities=8%  Similarity=0.154  Sum_probs=52.5

Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                      .+..++.+++.+++++|++++++++|||+ .||+.+|+++|...+++. +|+.....+......++..+   +++.||
T Consensus       180 ~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~-~g~~~~~~~~~~~~~pd~~~---~~l~~l  253 (264)
T 3epr_A          180 IGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGINNDIDTLLVT-TGFTTVEEVPDLPIQPSYVL---ASLDEW  253 (264)
T ss_dssp             CSTTSHHHHHHHHHHHTSCGGGEEEEESCTTTHHHHHHHHTCEEEEET-TSSSCGGGGGGCSSCCSEEE---SCGGGC
T ss_pred             CCCCCHHHHHHHHHHhCcCcccEEEECCCcHHHHHHHHHCCCeEEEEC-CCCCChHHHHhcCCCCCEEE---CCHHHH
Confidence            35557788999999999999999999999 699999998887655554 44444433332212345556   777665

>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0

Probab=99.60  E-value=1.1e-15  Score=126.83  Aligned_cols=80  Identities=8%  Similarity=0.088  Sum_probs=56.3

Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                      ..+.+|+.+++.+++++|++++++++|||+ .||+.|++++|...+.+ .+|+.....++.....++..+   +++.||.
T Consensus       180 ~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~~~~aG~~~~~v-~~g~~~~~~~~~~~~~~d~v~---~~~~el~  255 (266)
T 3pdw_A          180 FIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIMAGINAGMDTLLV-HTGVTKREHMTDDMEKPTHAI---DSLTEWI  255 (266)
T ss_dssp             ECSTTSSHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHHTCEEEEE-CCC------CCTTSCCCSEEE---SSGGGGH
T ss_pred             ccCCCCHHHHHHHHHHcCCChhhEEEECCCcHHHHHHHHHCCCeEEEE-CCCCCChHHHHhcCCCCCEEe---CCHHHHH
Confidence            446668899999999999999999999999 79999998877654444 445544443332111355666   8999988


Q ss_pred             HHHHH
Q 044617          228 KILLH  232 (265)
Q Consensus       228 ~~l~~  232 (265)
                      +.++.
T Consensus       256 ~~~~~  260 (266)
T 3pdw_A          256 PYIEG  260 (266)
T ss_dssp             HHHHH
T ss_pred             HHhhc
Confidence            87664

>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*

Probab=99.59  E-value=2.7e-15  Score=118.45  Aligned_cols=78  Identities=15%  Similarity=0.213  Sum_probs=67.6

Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                      +|+.|+++|++++|+||+....+...++.+|+..+|    ..                   .||           |+..+
T Consensus        61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~~----~~-------------------~kp-----------k~~~~  106 (188)
T 2r8e_A           61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLY----QG-------------------QSN-----------KLIAF  106 (188)
T ss_dssp             HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEEE----CS-------------------CSC-----------SHHHH
T ss_pred             HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCceee----cC-------------------CCC-----------CHHHH
Confidence            899999999999999999999999999999976443    21                   134           89999


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                      +.+++++|+++++++||||+.||+.+++++|.
T Consensus       107 ~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~  138 (188)
T 2r8e_A          107 SDLLEKLAIAPENVAYVGDDLIDWPVMEKVGL  138 (188)
T ss_dssp             HHHHHHHTCCGGGEEEEESSGGGHHHHTTSSE
T ss_pred             HHHHHHcCCCHHHEEEECCCHHHHHHHHHCCC
Confidence            99999999999999999999999999966443

>1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A

Probab=99.59  E-value=1.4e-16  Score=126.63  Aligned_cols=86  Identities=12%  Similarity=0.035  Sum_probs=72.0

Q ss_pred             CCCCChhHHHHHHHHHHc-CCcEEEEeCCCHHHHHHHHHhcCccc-ccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           69 QCPLDSHVAAAIKSAHSL-GCDLKIVSDANQFYIETIMEHHGLLG-CFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~-g~~~~ivS~~~~~~i~~~l~~~gl~~-~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      ...++||+.++|+.|+++ |++++|+||+....+...++.+|+.+ +|+                               
T Consensus        73 ~~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~f~-------------------------------  121 (197)
T 1q92_A           73 ELEPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAWVEKYFG-------------------------------  121 (197)
T ss_dssp             TCCBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHHHHHHHC-------------------------------
T ss_pred             cCCcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhchHHHhch-------------------------------
Confidence            467899999999999999 99999999999888888888888766 553                               


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCC----ccccc-CCCCCCeeeec
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGD----FCPTL-KLRDCDFVMPR  197 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~D----i~~a~-~~~~~~~~~~~  197 (265)
                                  ..+++++|++|+++++|||+.+|    +.+|+ ++|+..+.+..
T Consensus       122 ------------~~~~~~l~~~~~~~~~vgDs~~dD~~~~~~a~~~aG~~~i~~~~  165 (197)
T 1q92_A          122 ------------PDFLEQIVLTRDKTVVSADLLIDDRPDITGAEPTPSWEHVLFTA  165 (197)
T ss_dssp             ------------GGGGGGEEECSCSTTSCCSEEEESCSCCCCSCSSCSSEEEEECC
T ss_pred             ------------HHHHHHhccCCccEEEECcccccCCchhhhcccCCCceEEEecC
Confidence                        12356678889999999999999    99998 87776666654

>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*

Probab=99.58  E-value=1.6e-15  Score=134.04  Aligned_cols=93  Identities=15%  Similarity=0.191  Sum_probs=76.9

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCC------------HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDAN------------QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~------------~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                      ++||+.++|+.|+++|++++|+||+.            ...+..+++.+|+.  |+.+++..              ....
T Consensus        88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl~--fd~i~~~~--------------~~~~  151 (416)
T 3zvl_A           88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--FQVLVATH--------------AGLN  151 (416)
T ss_dssp             SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTSC--CEEEEECS--------------SSTT
T ss_pred             hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCCC--EEEEEECC--------------CCCC
Confidence            78999999999999999999999965            23378888999985  77777741              2234


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcC----CCCceEEEEcCCC-----------------CCcccccCCCCC
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFG----CGKQRFIYLGDGR-----------------GDFCPTLKLRDC  191 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~g----i~~~~~v~vGD~~-----------------~Di~~a~~~~~~  191 (265)
                      .||           ++.++..+++++|    +++++++||||+.                 +|+.+|+++|..
T Consensus       152 ~KP-----------~p~~~~~a~~~l~~~~~v~~~~~l~VGDs~gr~~~~~~~~~~~d~s~~Di~~A~~aGi~  213 (416)
T 3zvl_A          152 RKP-----------VSGMWDHLQEQANEGIPISVEDSVFVGDAAGRLANWAPGRKKKDFSCADRLFALNVGLP  213 (416)
T ss_dssp             STT-----------SSHHHHHHHHHSSTTCCCCGGGCEEECSCSCBCTTSSTTCCSCCSCCHHHHHHHHHTCC
T ss_pred             CCC-----------CHHHHHHHHHHhCCCCCCCHHHeEEEECCCCCcccccccccccCCChhhHHHHHHcCCc
Confidence            566           7899999999997    9999999999997                 799999775553

>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I

Probab=99.57  E-value=3.7e-15  Score=125.37  Aligned_cols=85  Identities=15%  Similarity=0.173  Sum_probs=70.5

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|+.|+++|++++|+||+....+..+++.+|+..+|+.++.                             
T Consensus       161 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~i~~-----------------------------  211 (287)
T 3a1c_A          161 SDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLP-----------------------------  211 (287)
T ss_dssp             ECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCSEEECSCCT-----------------------------
T ss_pred             ccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCceeeeecCh-----------------------------
Confidence            357899999999999999999999999999999999999998766543321                             


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                         ..|    ..++++++.. +++++|||+.||+.+|+++|.
T Consensus       212 ---~~K----~~~~~~l~~~-~~~~~vGDs~~Di~~a~~ag~  245 (287)
T 3a1c_A          212 ---HQK----SEEVKKLQAK-EVVAFVGDGINDAPALAQADL  245 (287)
T ss_dssp             ---TCH----HHHHHHHTTT-CCEEEEECTTTCHHHHHHSSE
T ss_pred             ---HHH----HHHHHHHhcC-CeEEEEECCHHHHHHHHHCCe
Confidence               116    4556677777 899999999999999987665

>1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10

Probab=99.57  E-value=1.4e-14  Score=121.74  Aligned_cols=46  Identities=15%  Similarity=0.134  Sum_probs=41.2

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                      .++.+.+.+|+.+++.+++.+|++++++++|||+.||+.|++.+|.
T Consensus       208 lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~  253 (288)
T 1nrw_A          208 FELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGK  253 (288)
T ss_dssp             EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSE
T ss_pred             EEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCc
Confidence            3566889999999999999999999999999999999999976554

>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14

Probab=99.56  E-value=1.6e-16  Score=131.85  Aligned_cols=126  Identities=12%  Similarity=0.098  Sum_probs=82.5

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHH--HHH-HHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFY--IET-IMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~--i~~-~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      ..++|++.++++.|+ +|+++ |+||+....  ... .....++..+|+.+++.+              .....||    
T Consensus       125 ~~~~~~~~~~l~~l~-~g~~~-i~tn~~~~~~~~~~~~~~~~~l~~~f~~~~~~~--------------~~~~~KP----  184 (264)
T 1yv9_A          125 ELSYEKVVLATLAIQ-KGALF-IGTNPDKNIPTERGLLPGAGSVVTFVETATQTK--------------PVYIGKP----  184 (264)
T ss_dssp             TCCHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHTCC--------------CEECSTT----
T ss_pred             CcCHHHHHHHHHHHh-CCCEE-EEECCCCcccCCCCcccCCcHHHHHHHHHhCCC--------------ccccCCC----
Confidence            457899999999997 78887 889986632  111 112223445565555431              1112355    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                             ++.+++.+++++|++|+++++|||+ .+|+.+|+++|...+++.. |......+.+....++..+   +++.|
T Consensus       185 -------~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~i~v~~-g~~~~~~l~~~~~~~d~v~---~~l~e  253 (264)
T 1yv9_A          185 -------KAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVTS-GFTPKSAVPTLPTPPTYVV---DSLDE  253 (264)
T ss_dssp             -------SHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEETT-SSSCSSSTTTCSSCCSEEE---SSGGG
T ss_pred             -------CHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHcCCcEEEECC-CCCCHHHHHhcCCCCCEEE---ecHHH
Confidence                   7899999999999999999999999 5999999998876666654 3332222221111345555   66665


Q ss_pred             H
Q 044617          226 L  226 (265)
Q Consensus       226 l  226 (265)
                      +
T Consensus       254 l  254 (264)
T 1yv9_A          254 W  254 (264)
T ss_dssp             C
T ss_pred             H
Confidence            4

>2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A

Probab=99.56  E-value=9.1e-15  Score=121.14  Aligned_cols=80  Identities=15%  Similarity=0.160  Sum_probs=57.9

Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                      ...++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.+|   +.++-. .+... ++.   .++..+   .+
T Consensus       177 ~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag---~~v~~~-n~~~~-~~~---~a~~v~---~~  245 (261)
T 2rbk_A          177 AFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAA---IGVAMG-QAKED-VKA---AADYVT---AP  245 (261)
T ss_dssp             TCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSS---EEEECT-TSCHH-HHH---HSSEEC---CC
T ss_pred             CeEEecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcC---ceEEec-CccHH-HHh---hCCEEe---cc
Confidence            33466788999999999999999999999999999999999996644   444432 22222 222   123333   67


Q ss_pred             HHH--HHHHHHHH
Q 044617          223 AEE--LKKILLHL  233 (265)
Q Consensus       223 ~~e--l~~~l~~~  233 (265)
                      ..|  +.+.|+++
T Consensus       246 ~~~dGv~~~l~~~  258 (261)
T 2rbk_A          246 IDEDGISKAMKHF  258 (261)
T ss_dssp             GGGTHHHHHHHHH
T ss_pred             CchhhHHHHHHHh
Confidence            777  88888765

>1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A

Probab=99.55  E-value=2.2e-14  Score=119.54  Aligned_cols=79  Identities=11%  Similarity=0.127  Sum_probs=55.4

Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCH--
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSA--  223 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  223 (265)
                      ++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.+   ++.++-. .+... +++   .++...   .+.  
T Consensus       184 ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~a---g~~va~~-na~~~-~k~---~a~~v~---~~~~~  252 (271)
T 1rlm_A          184 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMA---RYSFAMG-NAAEN-IKQ---IARYAT---DDNNH  252 (271)
T ss_dssp             EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHC---SEEEECT-TCCHH-HHH---HCSEEC---CCGGG
T ss_pred             EEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHc---CCeEEeC-CccHH-HHH---hCCeeC---cCCCC
Confidence            4557899999999999999999999999999999999999654   4444432 22222 222   122222   333  


Q ss_pred             HHHHHHHHHHHH
Q 044617          224 EELKKILLHLIG  235 (265)
Q Consensus       224 ~el~~~l~~~~~  235 (265)
                      +-+.+.|++++.
T Consensus       253 dGVa~~l~~~~~  264 (271)
T 1rlm_A          253 EGALNVIQAVLD  264 (271)
T ss_dssp             THHHHHHHHHHH
T ss_pred             ChHHHHHHHHHh
Confidence            338888888764

>2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A

Probab=99.53  E-value=3e-14  Score=117.84  Aligned_cols=104  Identities=14%  Similarity=0.156  Sum_probs=72.8

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCC---HHHHHHHHHhcCcc--cccceEEecCceecCCCceEEeeccccccCCC
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDAN---QFYIETIMEHHGLL--GCFSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~---~~~i~~~l~~~gl~--~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      ...++||+.++|+.|+++|++++|+||+.   ...+...++.+|+.  .+|+.+++...             .       
T Consensus        99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~~v~~~~vi~~~~~-------------~-------  158 (258)
T 2i33_A           99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAPQATKEHILLQDPK-------------E-------  158 (258)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCSSCSTTTEEEECTT-------------C-------
T ss_pred             CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCCcCCCceEEECCCC-------------C-------
Confidence            46789999999999999999999999998   55677778888987  66666665310             0       


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCccccc-------C---------CCCCCeeeecCCCchhh
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTL-------K---------LRDCDFVMPRKNYPLWD  204 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~-------~---------~~~~~~~~~~~~~~~~~  204 (265)
                               .|+.....+.+ .+  ...+++|||+.+|+.+|.       +         +|...+.+....++.+.
T Consensus       159 ---------~K~~~~~~~~~-~~--~~~~l~VGDs~~Di~aA~~~~~~~r~a~v~~~~~~aG~~~i~lpn~~y~~w~  223 (258)
T 2i33_A          159 ---------KGKEKRRELVS-QT--HDIVLFFGDNLSDFTGFDGKSVKDRNQAVTDSKAQFGEKFIIFPNPMYGDWE  223 (258)
T ss_dssp             ---------CSSHHHHHHHH-HH--EEEEEEEESSGGGSTTCSSCCHHHHHHHHHHTGGGBTTTEEECCCCSSSHHH
T ss_pred             ---------CCcHHHHHHHH-hC--CCceEEeCCCHHHhcccccCCHHHHHHHHHHHHHHhcCceEECCCCCcchhh
Confidence                     02333333322 22  245899999999999983       2         46655666666666654

>2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10

Probab=99.53  E-value=7.3e-14  Score=118.30  Aligned_cols=82  Identities=9%  Similarity=0.090  Sum_probs=56.4

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEe-CCCH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHE-WSSA  223 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  223 (265)
                      .++.+.+.+|+.+++.+++.+|++++++++|||+.||+.|++.+   ++.++-. .+... +++.   ++..+ . -.+.
T Consensus       216 lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~a---g~~va~~-na~~~-~k~~---a~~v~-~~~~~~  286 (301)
T 2b30_A          216 AEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNF---KYSFAVA-NATDS-AKSH---AKCVL-PVSHRE  286 (301)
T ss_dssp             EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSC---SEEEECT-TCCHH-HHHH---SSEEC-SSCTTT
T ss_pred             eEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHc---CCeEEEc-CCcHH-HHhh---CCEEE-ccCCCC
Confidence            46678899999999999999999999999999999999999654   4455432 22222 2221   22222 1 1233


Q ss_pred             HHHHHHHHHHHH
Q 044617          224 EELKKILLHLIG  235 (265)
Q Consensus       224 ~el~~~l~~~~~  235 (265)
                      .-+.+.|++++.
T Consensus       287 dGVa~~l~~~~~  298 (301)
T 2b30_A          287 GAVAYLLKKVFD  298 (301)
T ss_dssp             THHHHHHHHHHT
T ss_pred             cHHHHHHHHHHh
Confidence            448888887753

>3bwv_A Putative 5'(3')-deoxyribonucleotidase; NP_764060.1, deoxyribonucleotidase-like protein; HET: MSE; 1.55A {Staphylococcus epidermidis}

Probab=99.52  E-value=1.3e-14  Score=113.44  Aligned_cols=166  Identities=12%  Similarity=0.095  Sum_probs=92.2

Q ss_pred             CCceEEEEecCCCCCCCCch--HHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCH-HHHH--HHhcCCCCChh
Q 044617            1 MADVVVVFDFDRTLIDDDSD--NWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTV-EDIA--NCLRQCPLDSH   75 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~g   75 (265)
                      ||+++|+|||||||+|+...  ....+.+|.+..... +....+......       ..... +.+.  .......++||
T Consensus         2 Mm~~~viFD~DGtL~Ds~~~~~~~~~~~~g~~~~~~~-~~g~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~pg   73 (180)
T 3bwv_A            2 MTRQRIAIDMDEVLADTLGAVVKAVNERADLNIKMES-LNGKKLKHMIPE-------HEGLVMDILKEPGFFRNLDVMPH   73 (180)
T ss_dssp             -CCCEEEEETBTTTBCHHHHHHHHHHHHSCCCCCGGG-CTTCCC---------------CHHHHHHHSTTGGGSCCBCTT
T ss_pred             CcccEEEEeCCCcccccHHHHHHHHHHHhCCCCCHHH-HcCccHHHHCCc-------hHHHHHHHHhCcchhccCCCCcC
Confidence            67799999999999999764  222233444311111 111111111000       00000 1111  12235688999


Q ss_pred             HHHHHHHHHHcCCcEEEEeCC---CHH--HHHHHHHh-cCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           76 VAAAIKSAHSLGCDLKIVSDA---NQF--YIETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        76 ~~e~l~~l~~~g~~~~ivS~~---~~~--~i~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      +.++|+.|++. ++++|+||+   ...  .....+.. ++...+++.+++.+                            
T Consensus        74 ~~e~L~~L~~~-~~~~i~T~~~~~~~~~~~~~~~l~~~f~~~~~~~~i~~~~----------------------------  124 (180)
T 3bwv_A           74 AQEVVKQLNEH-YDIYIATAAMDVPTSFHDKYEWLLEYFPFLDPQHFVFCGR----------------------------  124 (180)
T ss_dssp             HHHHHHHHTTT-SEEEEEECC--CCSHHHHHHHHHHHHCTTSCGGGEEECSC----------------------------
T ss_pred             HHHHHHHHHhc-CCEEEEeCCCCcchHHHHHHHHHHHHcCCCCcccEEEeCC----------------------------
Confidence            99999999995 999999998   321  22334444 56656666666630                            


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHH
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKI  229 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~  229 (265)
                          +.        .+    +++++|||+.+++..+  +| ..+++ .+++...      + .+...+   +++.||..+
T Consensus       125 ----~~--------~l----~~~l~ieDs~~~i~~a--aG-~~i~~-~~~~~~~------~-~~~~~i---~~~~el~~~  174 (180)
T 3bwv_A          125 ----KN--------II----LADYLIDDNPKQLEIF--EG-KSIMF-TASHNVY------E-HRFERV---SGWRDVKNY  174 (180)
T ss_dssp             ----GG--------GB----CCSEEEESCHHHHHHC--SS-EEEEE-CCGGGTT------C-CSSEEE---CSHHHHHHH
T ss_pred             ----cC--------ee----cccEEecCCcchHHHh--CC-CeEEe-CCCcccC------C-CCceec---CCHHHHHHH
Confidence                11        11    5789999999998643  35 43444 3332211      1 233445   999999988


Q ss_pred             HHHH
Q 044617          230 LLHL  233 (265)
Q Consensus       230 l~~~  233 (265)
                      |.++
T Consensus       175 l~~~  178 (180)
T 3bwv_A          175 FNSI  178 (180)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            7654

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=99.51  E-value=3.4e-15  Score=129.93  Aligned_cols=144  Identities=15%  Similarity=0.121  Sum_probs=104.1

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccc--eEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFS--EIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~--~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ..++||+.++|+.|+++|++++|+||+....+...++.+|+..+|+  .+++.+.... .+.  ..+......||     
T Consensus       214 ~~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd~~~Ivs~ddv~~-~~~--~~~~~kp~~KP-----  285 (384)
T 1qyi_A          214 LRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLE-AEN--MYPQARPLGKP-----  285 (384)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHH-HHH--HSTTSCCCCTT-----
T ss_pred             CCcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcCCCEEEecccccc-ccc--ccccccCCCCC-----
Confidence            3678999999999999999999999999999999999999999998  6777421100 000  00000012455     


Q ss_pred             cCCCCchHHHHHHHHHhcC--------------CCCceEEEEcCCCCCcccccCCCCCCeeeecCCCc---hhhhhhcCC
Q 044617          148 CPSNLCKGFVLDHVCTSFG--------------CGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP---LWDRICSNP  210 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~g--------------i~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~---~~~~~~~~~  210 (265)
                            +|..+..+++++|              ++|++|++|||+.+|+.+|+++|+..+++.. |+.   ....+... 
T Consensus       286 ------~P~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~~I~V~~-g~~~~~~~~~l~~~-  357 (384)
T 1qyi_A          286 ------NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLT-GLKGKDAAGELEAH-  357 (384)
T ss_dssp             ------STHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESC-BTTBGGGHHHHHHT-
T ss_pred             ------CHHHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCEEEEECC-CccccccHHHHhhc-
Confidence                  7899999999999              8999999999999999999998877665543 332   11222111 


Q ss_pred             CeeeEEEEeCCCHHHHHHHHHHH
Q 044617          211 MLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       211 ~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                       .++..+   +++.||...|...
T Consensus       358 -~ad~vi---~sl~eL~~~l~~~  376 (384)
T 1qyi_A          358 -HADYVI---NHLGELRGVLDNL  376 (384)
T ss_dssp             -TCSEEE---SSGGGHHHHHSCT
T ss_pred             -CCCEEE---CCHHHHHHHHHHH
Confidence             234556   8899988877543

>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A

Probab=99.51  E-value=3.1e-13  Score=114.12  Aligned_cols=133  Identities=15%  Similarity=0.097  Sum_probs=91.5

Q ss_pred             HhCCCCHHHHHHHhc--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceE
Q 044617           54 HSQGKTVEDIANCLR--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLR  131 (265)
Q Consensus        54 ~~~~~~~~~~~~~~~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~  131 (265)
                      ...+.....+.+.+.  ..++.||+.++++.|+++|++++++|++....++.+++.+|+......++++...+++++...
T Consensus       122 ~~~gl~~~~~~~~v~~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~  201 (297)
T 4fe3_A          122 IEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLK  201 (297)
T ss_dssp             HHTTCBGGGHHHHHHTSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEE
T ss_pred             hhcCccHHHHHHHHHhcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeE
Confidence            334554444444443  478899999999999999999999999999999999999998755556888877777554433


Q ss_pred             EeeccccccCCCcccccCCCCchHHHHHHHHHh--cCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          132 ILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTS--FGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       132 ~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~--~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      ......           .....|.....+....  +.-...+++|+|||.||+.|++.+..++++++-
T Consensus       202 ~~~~~~-----------i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiai  258 (297)
T 4fe3_A          202 GFKGEL-----------IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKI  258 (297)
T ss_dssp             EECSSC-----------CCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEE
T ss_pred             eccccc-----------cchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEE
Confidence            211110           0112244444333222  222447899999999999998766777766653

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=99.50  E-value=2.6e-16  Score=133.55  Aligned_cols=132  Identities=11%  Similarity=0.100  Sum_probs=86.5

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHH--H-HHHHhcC-cccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYI--E-TIMEHHG-LLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i--~-~~l~~~g-l~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      .++|++.++++.|+++|+ ++++||......  . ..+...| +..+|+.+++.+              .....||    
T Consensus       156 ~~~~~~~~~l~~l~~~g~-~~i~tn~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~--------------~~~~~KP----  216 (306)
T 2oyc_A          156 FSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQ--------------ALVVGKP----  216 (306)
T ss_dssp             CCHHHHHHHHHHHTSTTS-EEEESCCCCEEECTTSCEEECHHHHHHHHHHHHTCC--------------CEECSTT----
T ss_pred             CCHHHHHHHHHHHHcCCC-EEEEEcCCccccCCCCCcCCCCcHHHHHHHHHhCCC--------------ceeeCCC----
Confidence            457899999999999888 999999865433  1 1222223 334444444321              0112345    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhc------CCCeeeEEEEe
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICS------NPMLIKAKVHE  219 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~  219 (265)
                             |+.+++.+++++|++|+++++|||+. ||+.+|+++|...+.+.. |......+..      ....++..+  
T Consensus       217 -------~~~~~~~~~~~lgi~~~e~l~vGD~~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~~~~~~~~~pd~vi--  286 (306)
T 2oyc_A          217 -------SPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLT-GVSRLEEAQAYLAAGQHDLVPHYYV--  286 (306)
T ss_dssp             -------STHHHHHHHHHSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESS-SSCCHHHHHHHHHTTCGGGSCSEEE--
T ss_pred             -------CHHHHHHHHHHcCCChHHEEEECCCchHHHHHHHHCCCeEEEECC-CCCCHHHHHhhhcccccCCCCCEEE--
Confidence                   88999999999999999999999996 999999998876555544 4433222211      111345556  


Q ss_pred             CCCHHHHHHHHHH
Q 044617          220 WSSAEELKKILLH  232 (265)
Q Consensus       220 ~~~~~el~~~l~~  232 (265)
                       +++.||.+++++
T Consensus       287 -~~l~el~~~l~~  298 (306)
T 2oyc_A          287 -ESIADLTEGLED  298 (306)
T ss_dssp             -SSGGGGGGGC--
T ss_pred             -CCHHHHHHHHHh
Confidence             888888776554

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=99.48  E-value=1.1e-15  Score=126.83  Aligned_cols=130  Identities=12%  Similarity=0.003  Sum_probs=87.2

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHH--HHHHHh-cCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYI--ETIMEH-HGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i--~~~l~~-~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      ...+|++.++++.|+ +|+++ |+||+.....  ...+.. .++..+|+.+++.+              .....||    
T Consensus       129 ~~~~~~~~~~l~~L~-~g~~~-i~tn~~~~~~~~~~~l~~~~~l~~~~~~~~~~~--------------~~~~~KP----  188 (263)
T 1zjj_A          129 DLTYEKLKYATLAIR-NGATF-IGTNPDATLPGEEGIYPGAGSIIAALKVATNVE--------------PIIIGKP----  188 (263)
T ss_dssp             TCBHHHHHHHHHHHH-TTCEE-EESCCCSEEEETTEEEECHHHHHHHHHHHHCCC--------------CEECSTT----
T ss_pred             CCCHHHHHHHHHHHH-CCCEE-EEECCCccccCCCCCcCCcHHHHHHHHHHhCCC--------------ccEecCC----
Confidence            356889999999999 79988 9999876543  222222 34445566555531              1123456    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                             ++.+++.++++  ++|++++||||+. +|+.+|+++|+..+.+.. |......+......++..+   +++.|
T Consensus       189 -------~~~~~~~~~~~--~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~-g~~~~~~~~~~~~~p~~~~---~~l~e  255 (263)
T 1zjj_A          189 -------NEPMYEVVREM--FPGEELWMVGDRLDTDIAFAKKFGMKAIMVLT-GVSSLEDIKKSEYKPDLVL---PSVYE  255 (263)
T ss_dssp             -------SHHHHHHHHHH--STTCEEEEEESCTTTHHHHHHHTTCEEEEESS-SSCCHHHHTTCSSCCSEEE---SSGGG
T ss_pred             -------CHHHHHHHHHh--CCcccEEEECCChHHHHHHHHHcCCeEEEECC-CCCChHHHHhcCCCCCEEE---CCHHH
Confidence                   89999999998  8999999999995 999999998887666654 3332222322111345556   88888


Q ss_pred             HHHHHHH
Q 044617          226 LKKILLH  232 (265)
Q Consensus       226 l~~~l~~  232 (265)
                      |.++|.+
T Consensus       256 l~~~l~~  262 (263)
T 1zjj_A          256 LIDYLKT  262 (263)
T ss_dssp             GGGGGC-
T ss_pred             HHHHHhh
Confidence            8776543

>1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24

Probab=99.48  E-value=9.9e-14  Score=119.03  Aligned_cols=214  Identities=10%  Similarity=-0.014  Sum_probs=115.4

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHH--------H---HHHHcc-CCh--hHHHHHHHHHHHhCCCCHHHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHL--------F---NQLRST-LPW--NSLMDRMMKELHSQGKTVEDIANC   66 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~--------~---~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~   66 (265)
                      ||+|+|+|||||||++++....+.+..+....        .   ...... ..+  ..+... ...+..+|.......+.
T Consensus        19 ~~~kli~fDlDGTLld~~~~~~l~~~~~~g~~~~~~tGR~~~~~~~~~~~~~~~~~~~l~~~-~~~i~~nGa~i~~~~~~   97 (332)
T 1y8a_A           19 FQGHMFFTDWEGPWILTDFALELCMAVFNNARFFSNLSEYDDYLAYEVRREGYEAGYTLKLL-TPFLAAAGVKNRDVERI   97 (332)
T ss_dssp             -CCCEEEECSBTTTBCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHH-HHHHHHTTCCHHHHHHH
T ss_pred             CCceEEEEECcCCCcCccHHHHHHHHHHCCCEEEEEcCCCchhhhhhhhccCeechhhcCCc-CeEEEcCCcEEEECCeE
Confidence            45799999999999999875333333332211        1   111100 111  111111 12333456544333333


Q ss_pred             hcC-CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecC---------------CCce
Q 044617           67 LRQ-CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDE---------------QGRL  130 (265)
Q Consensus        67 ~~~-~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~---------------~~~~  130 (265)
                      +.. ..+.+++.++++.|++ |++++++|+....++....+.+++.   +.+++....++.               ....
T Consensus        98 ~~~~~~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~  173 (332)
T 1y8a_A           98 AELSAKFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVR---GELHGTEVDFDSIAVPEGLREELLSIIDVIA  173 (332)
T ss_dssp             HHHHCCBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCC---SEEEEEBCCGGGCCCCHHHHHHHHHHHHHHH
T ss_pred             eeccCCCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhh---hhhcccccchhhhccccccceeEEecCHHHH
Confidence            334 4678999999999999 9999999998877787777777652   233332111110               0000


Q ss_pred             EEeec--c-------ccccCCCccc---ccCCCCchHHHHHHHHHhcCCCCce----EEEEcCCCCCcccccCC----CC
Q 044617          131 RILPY--H-------DSTLSHHGCN---LCPSNLCKGFVLDHVCTSFGCGKQR----FIYLGDGRGDFCPTLKL----RD  190 (265)
Q Consensus       131 ~~~~~--~-------~~~~kp~~~~---~~~~~~~K~~~i~~~~~~~gi~~~~----~v~vGD~~~Di~~a~~~----~~  190 (265)
                      . .+.  .       ....+|....   +.+.+.+|..+++      |+++++    +++|||+.||+.|++.+    +.
T Consensus       174 ~-~~~~~~l~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~------gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~  246 (332)
T 1y8a_A          174 S-LSGEELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMR------GYCESKGIDFPVVVGDSISDYKMFEAARGLGGV  246 (332)
T ss_dssp             H-CCHHHHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHH------HHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCE
T ss_pred             h-hhhHHHHHHHHHHHhhcCCCceeeEEecCCCCCHHHHHh------ccChhhcCceEEEEeCcHhHHHHHHHHhhcCCe
Confidence            0 000  0       0000111121   3445566777666      455677    99999999999999764    33


Q ss_pred             CCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHHHh
Q 044617          191 CDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGA  236 (265)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~  236 (265)
                       ++++ + +  . +.+++.   ++..+ .-++...+...|++++..
T Consensus       247 -~vam-n-a--~-~~lk~~---Ad~v~-~~~~~dGV~~~l~~~~~~  282 (332)
T 1y8a_A          247 -AIAF-N-G--N-EYALKH---ADVVI-ISPTAMSEAKVIELFMER  282 (332)
T ss_dssp             -EEEE-S-C--C-HHHHTT---CSEEE-ECSSTHHHHHHHHHHHHH
T ss_pred             -EEEe-c-C--C-HHHHhh---CcEEe-cCCCCCHHHHHHHHHHHc
Confidence             3444 2 2  2 223322   23333 235567788888887744

>1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10

Probab=99.44  E-value=5.2e-13  Score=111.05  Aligned_cols=80  Identities=13%  Similarity=0.178  Sum_probs=54.2

Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                      ++.+.+.+|+.+++.+++++|++++++++|||+.||+.|++.   +++.++-. .+... +++.   ++..+ .-.+...
T Consensus       183 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~---ag~~v~~~-n~~~~-~~~~---a~~v~-~~~~~dG  253 (268)
T 1nf2_A          183 EIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEE---AGLRVAME-NAIEK-VKEA---SDIVT-LTNNDSG  253 (268)
T ss_dssp             EEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTT---CSEEEECT-TSCHH-HHHH---CSEEC-CCTTTTH
T ss_pred             EEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHH---cCCEEEec-CCCHH-HHhh---CCEEE-ccCCcch
Confidence            556889999999999999999999999999999999999955   44455433 22222 2221   22322 1122334


Q ss_pred             HHHHHHHHH
Q 044617          226 LKKILLHLI  234 (265)
Q Consensus       226 l~~~l~~~~  234 (265)
                      +.+.|++++
T Consensus       254 v~~~i~~~~  262 (268)
T 1nf2_A          254 VSYVLERIS  262 (268)
T ss_dssp             HHHHHTTBC
T ss_pred             HHHHHHHHH
Confidence            777776654

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=99.43  E-value=6.4e-15  Score=123.53  Aligned_cols=98  Identities=10%  Similarity=0.069  Sum_probs=74.5

Q ss_pred             hHHHHHHHHHHcCCcEEEEeCCCHHHH--H--HHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           75 HVAAAIKSAHSLGCDLKIVSDANQFYI--E--TIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        75 g~~e~l~~l~~~g~~~~ivS~~~~~~i--~--~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      ...++++.|+++|++ +|+||+.....  .  .+++..++..+|+.+++.+              .....||        
T Consensus       149 ~~~~l~~~L~~~g~~-~i~tn~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~--------------~~~~~KP--------  205 (284)
T 2hx1_A          149 DLNKTVNLLRKRTIP-AIVANTDNTYPLTKTDVAIAIGGVATMIESILGRR--------------FIRFGKP--------  205 (284)
T ss_dssp             HHHHHHHHHHHCCCC-EEEECCCSEEECSSSCEEECHHHHHHHHHHHHCSC--------------EEEESTT--------
T ss_pred             cHHHHHHHHhcCCCe-EEEECCCccccCcCCCccccCChHHHHHHHHhCCc--------------eeEecCC--------
Confidence            666777789999999 99999876655  2  1224456667777776641              1123456        


Q ss_pred             CCchHHHHHHHHHhc----CCCCceEEEEcCCC-CCcccccCCCCCCeeeecC
Q 044617          151 NLCKGFVLDHVCTSF----GCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~----gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~  198 (265)
                         ++.+++.+++++    |++|++++||||+. +|+.+|+++|...+.+..+
T Consensus       206 ---~p~~~~~a~~~l~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~v~~g  255 (284)
T 2hx1_A          206 ---DSQMFMFAYDMLRQKMEISKREILMVGDTLHTDILGGNKFGLDTALVLTG  255 (284)
T ss_dssp             ---SSHHHHHHHHHHHTTSCCCGGGEEEEESCTTTHHHHHHHHTCEEEEESSS
T ss_pred             ---CHHHHHHHHHHHhhccCCCcceEEEECCCcHHHHHHHHHcCCeEEEECCC
Confidence               789999999999    99999999999995 9999999988876666543

>4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii}

Probab=99.43  E-value=1.9e-12  Score=112.87  Aligned_cols=117  Identities=14%  Similarity=0.043  Sum_probs=87.1

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccc--cceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGC--FSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~--f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      +++|+++++++.|+++|++++|||++....++.+.+.+|+..-  -+.|++++..++++|.++..-...   .|     .
T Consensus       221 r~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~~~Vig~~l~~~~dG~~tg~~~~~---~p-----~  292 (385)
T 4gxt_A          221 RTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKEEKVLGLRLMKDDEGKILPKFDKD---FP-----I  292 (385)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCGGGEEEECEEECTTCCEEEEECTT---SC-----C
T ss_pred             eeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCcceEEEeEEEEecCCceeeeecCc---cc-----e
Confidence            3799999999999999999999999999999999999876321  246899988888788776521110   01     0


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                      .-+.+|+..++.+++.. +....++++|||.+|+.|+.......+.++
T Consensus       293 ~~~~gK~~~i~~~~~~~-~~~~~i~a~GDs~~D~~ML~~~~~~~~~li  339 (385)
T 4gxt_A          293 SIREGKVQTINKLIKND-RNYGPIMVGGDSDGDFAMLKEFDHTDLSLI  339 (385)
T ss_dssp             CSTHHHHHHHHHHTCCT-TEECCSEEEECSGGGHHHHHHCTTCSEEEE
T ss_pred             eCCCchHHHHHHHHHhc-CCCCcEEEEECCHhHHHHHhcCccCceEEE
Confidence            12445899998877542 455679999999999999975444444444

>1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10

Probab=99.43  E-value=9.1e-13  Score=110.05  Aligned_cols=45  Identities=16%  Similarity=0.176  Sum_probs=40.5

Q ss_pred             ccccCCCCchHHHHHHHHHhcC-CCCce--EEEEcCCCCCcccccCCC
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFG-CGKQR--FIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~g-i~~~~--~v~vGD~~~Di~~a~~~~  189 (265)
                      .++.+.+.+|+.+++.+++.+| +++++  +++|||+.||+.|++.++
T Consensus       181 leI~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag  228 (275)
T 1xvi_A          181 WHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMD  228 (275)
T ss_dssp             EEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSS
T ss_pred             EEEecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCC
Confidence            4667899999999999999999 99999  999999999999996543

>2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A

Probab=99.40  E-value=1.4e-12  Score=107.32  Aligned_cols=49  Identities=20%  Similarity=0.102  Sum_probs=41.9

Q ss_pred             ccccCCCCchHHHHHHHHHhcCC-CCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGC-GKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi-~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      .++.+ +.+|+.+++.+++.+|+ +++++++|||+.||+.|.+.   +++.++-
T Consensus       172 ~ei~~-g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~---ag~~va~  221 (249)
T 2zos_A          172 YTVHG-NSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEV---VDKVFIV  221 (249)
T ss_dssp             EEEEC-SCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTT---SSEEEEE
T ss_pred             EEEeC-CCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHh---CCcEEEe
Confidence            46678 99999999999999998 99999999999999999954   4445543

>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*

Probab=99.11  E-value=2.3e-14  Score=119.09  Aligned_cols=85  Identities=9%  Similarity=0.121  Sum_probs=71.0

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|+.|+++|++++++||+....+..+++.+|+.++|+.++.                             
T Consensus       134 ~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~f~~~~p-----------------------------  184 (263)
T 2yj3_A          134 SDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQEYYSNLSP-----------------------------  184 (263)
Confidence            346899999999999999999999999999999999999998877654432                             


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLR  189 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~  189 (265)
                             .....++++++..+++++||||+.||+.+++++|
T Consensus       185 -------~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Ag  218 (263)
T 2yj3_A          185 -------EDKVRIIEKLKQNGNKVLMIGDGVNDAAALALAD  218 (263)
Confidence                   1224466777788899999999999999997655

>1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A*

Probab=99.39  E-value=6.6e-13  Score=108.97  Aligned_cols=53  Identities=13%  Similarity=0.061  Sum_probs=44.7

Q ss_pred             CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      +...++++.+.+|+.+++.+++++|++++++++|||+.||+.|++.   +++.++-
T Consensus       151 ~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~---~g~~va~  203 (244)
T 1s2o_A          151 GKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFET---SARGVIV  203 (244)
T ss_dssp             TTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTS---SSEEEEC
T ss_pred             CceEEeccCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhc---cCcEEEE
Confidence            3445788999999999999999999999999999999999999964   4444443

>2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens}

Probab=99.39  E-value=1.5e-13  Score=108.73  Aligned_cols=97  Identities=9%  Similarity=0.066  Sum_probs=76.7

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      ..++||+.++|+++++. ++++|+|++...+++.+++.+++..+|+.+++.+....                        
T Consensus        67 v~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~f~~~l~rd~~~~------------------------  121 (195)
T 2hhl_A           67 VLKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVF------------------------  121 (195)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSCEEEEECGGGCEE------------------------
T ss_pred             EEeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCcccEEEEEEccccee------------------------
Confidence            46789999999999998 99999999999999999999999989888877421110                        


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                         .| ..+.+.++.+|.++++|++|||+.+++.++.+   +++.+..+
T Consensus       122 ---~k-~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~---ngi~i~~~  163 (195)
T 2hhl_A          122 ---HR-GNYVKDLSRLGRELSKVIIVDNSPASYIFHPE---NAVPVQSW  163 (195)
T ss_dssp             ---ET-TEEECCGGGSSSCGGGEEEEESCGGGGTTCGG---GEEECCCC
T ss_pred             ---cC-CceeeeHhHhCCChhHEEEEECCHHHhhhCcc---CccEEeee
Confidence               02 23444577889999999999999999998854   34444443

>3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A*

Probab=99.37  E-value=8.5e-13  Score=108.47  Aligned_cols=43  Identities=16%  Similarity=0.243  Sum_probs=36.1

Q ss_pred             CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCC----CCCcccccCC
Q 044617          142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG----RGDFCPTLKL  188 (265)
Q Consensus       142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~----~~Di~~a~~~  188 (265)
                      |...++.+.|.+|+.+++++++    +++++++|||+    .||+.|.+.+
T Consensus       176 ~~~leI~~~gv~Kg~al~~L~~----~~~ev~afGD~~~~g~NDi~Ml~~a  222 (246)
T 3f9r_A          176 QISFDVFPVGWDKTYCLQFVED----DFEEIHFFGDKTQEGGNDYEIYTDK  222 (246)
T ss_dssp             TTEEEEEETTCSGGGGGGGTTT----TCSEEEEEESCCSTTSTTHHHHTCT
T ss_pred             CeEEEEEeCCCCHHHHHHHHHc----CcccEEEEeCCCCCCCCCHHHHhCC
Confidence            3345677889999999999998    78999999995    9999998543

>2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A

Probab=99.36  E-value=3.2e-13  Score=105.81  Aligned_cols=89  Identities=12%  Similarity=0.145  Sum_probs=72.2

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      ..++||+.++|+++++. ++++|+|++...+++.+++.++...+|..+++.+....          .             
T Consensus        54 v~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~~f~~~~~rd~~~~----------~-------------  109 (181)
T 2ght_A           54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF----------H-------------  109 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTCCEEEEECGGGSEE----------E-------------
T ss_pred             EEeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCCcEEEEEeccCcee----------c-------------
Confidence            46799999999999998 99999999999999999999999888888776421110          0             


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccC
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLK  187 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~  187 (265)
                          | ..+.+.++.+|.++++|++|||+..++.++.+
T Consensus       110 ----k-~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~  142 (181)
T 2ght_A          110 ----R-GNYVKDLSRLGRDLRRVLILDNSPASYVFHPD  142 (181)
T ss_dssp             ----T-TEEECCGGGTCSCGGGEEEECSCGGGGTTCTT
T ss_pred             ----C-CcEeccHHHhCCCcceEEEEeCCHHHhccCcC
Confidence                1 12334467789999999999999999988854

>3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A*

Probab=99.34  E-value=3e-12  Score=105.81  Aligned_cols=78  Identities=10%  Similarity=-0.036  Sum_probs=53.5

Q ss_pred             cccCCCCchHHHHHHHHHhcCCCC--ceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGK--QRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSA  223 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~--~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (265)
                      ++.+. .+|+.+++.+++++|+++  +++++|||+.||+.|++.   +++.++-.+...   +.  .   . .+..-.+.
T Consensus       170 ei~~~-~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~---ag~~va~~na~~---~~--~---~-~~~~~~~~  236 (259)
T 3zx4_A          170 HAAKG-ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRA---VDLAVYVGRGDP---PE--G---V-LATPAPGP  236 (259)
T ss_dssp             EEESS-CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHT---SSEEEECSSSCC---CT--T---C-EECSSCHH
T ss_pred             EEcCC-CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHh---CCCeEEeCChhh---cC--C---c-EEeCCCCc
Confidence            45566 889999999999999998  999999999999999955   445555332211   21  1   1 12122333


Q ss_pred             HHHHHHHHHHHHh
Q 044617          224 EELKKILLHLIGA  236 (265)
Q Consensus       224 ~el~~~l~~~~~~  236 (265)
                      .-+.+.|+.++..
T Consensus       237 ~gv~~~~~~~~~~  249 (259)
T 3zx4_A          237 EGFRYAVERYLLP  249 (259)
T ss_dssp             HHHHHHHHHHTTT
T ss_pred             hHHHHHHHHHHHh
Confidence            4488888887643

>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A

Probab=99.33  E-value=2.1e-12  Score=109.13  Aligned_cols=100  Identities=8%  Similarity=-0.040  Sum_probs=78.1

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHh--------cCcccccceEEecCceecCCCceEEeecc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFY---IETIMEH--------HGLLGCFSEIYTNPTYVDEQGRLRILPYH  136 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~---i~~~l~~--------~gl~~~f~~i~~~~~~~d~~~~~~~~~~~  136 (265)
                      ....++||+.++|+.|+++|++++++||+....   +...++.        +|+  +|+.+++.+.             .
T Consensus       185 ~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~-------------~  249 (301)
T 1ltq_A          185 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGV--PLVMQCQREQ-------------G  249 (301)
T ss_dssp             GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCC--CCSEEEECCT-------------T
T ss_pred             cccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCC--CchheeeccC-------------C
Confidence            356889999999999999999999999997543   4566677        888  4777776411             0


Q ss_pred             ccccCCCcccccCCCCchHHHHHHHHHhcCCCCce-EEEEcCCCCCcccccCCCCCCeee
Q 044617          137 DSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQR-FIYLGDGRGDFCPTLKLRDCDFVM  195 (265)
Q Consensus       137 ~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~-~v~vGD~~~Di~~a~~~~~~~~~~  195 (265)
                        ..||           +|..+..++++++.++.+ ++||||+.+|+.+|+++|...+.+
T Consensus       250 --~~kp-----------~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~~~~v  296 (301)
T 1ltq_A          250 --DTRK-----------DDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQV  296 (301)
T ss_dssp             --CCSC-----------HHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEEC
T ss_pred             --CCcH-----------HHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCeEEEe
Confidence              1245           899999999999877644 799999999999999877654444

>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A

Probab=99.28  E-value=1.5e-11  Score=101.01  Aligned_cols=86  Identities=17%  Similarity=0.157  Sum_probs=64.8

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCH----HHHHHHHHhcCcccccc-eEEecCceecCCCceEEeeccccccCCC
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQ----FYIETIMEHHGLLGCFS-EIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~----~~i~~~l~~~gl~~~f~-~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      ..+++||+.++|+.|+++|++++|+||+..    ..+...++.+|+..+++ .++...            ..        
T Consensus        99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~------------~~--------  158 (262)
T 3ocu_A           99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEESAFYLKK------------DK--------  158 (262)
T ss_dssp             CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSGGGEEEES------------SC--------
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccccceeccC------------CC--------
Confidence            567899999999999999999999999865    57888899999976552 233210            00        


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT  185 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a  185 (265)
                              ..|......+.+. |.  .-+++|||..+|+.++
T Consensus       159 --------~~K~~~r~~l~~~-Gy--~iv~~vGD~~~Dl~~~  189 (262)
T 3ocu_A          159 --------SAKAARFAEIEKQ-GY--EIVLYVGDNLDDFGNT  189 (262)
T ss_dssp             --------SCCHHHHHHHHHT-TE--EEEEEEESSGGGGCST
T ss_pred             --------CChHHHHHHHHhc-CC--CEEEEECCChHHhccc
Confidence                    1277777777765 22  3499999999999885

>1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15

Probab=99.26  E-value=3.2e-11  Score=98.58  Aligned_cols=77  Identities=17%  Similarity=0.032  Sum_probs=53.8

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC--
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS--  222 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  222 (265)
                      .++.+.+.+|+.+++.+++.+|     +++|||+.||+.|.+.+.. ++.++-.+.      +   ..++...   .+  
T Consensus       152 lei~~~~~~Kg~al~~l~~~~g-----via~GD~~ND~~Ml~~a~~-g~~vam~Na------~---~~A~~v~---~~~~  213 (239)
T 1u02_A          152 IELRVPGVNKGSAIRSVRGERP-----AIIAGDDATDEAAFEANDD-ALTIKVGEG------E---THAKFHV---ADYI  213 (239)
T ss_dssp             EEEECTTCCHHHHHHHHHTTSC-----EEEEESSHHHHHHHHTTTT-SEEEEESSS------C---CCCSEEE---SSHH
T ss_pred             EEEEcCCCCHHHHHHHHHhhCC-----eEEEeCCCccHHHHHHhhC-CcEEEECCC------C---CcceEEe---CCCC
Confidence            4677999999999999999997     9999999999999954210 555554321      1   1223333   34  


Q ss_pred             -HHHHHHHHHHHHHhhcc
Q 044617          223 -AEELKKILLHLIGAISI  239 (265)
Q Consensus       223 -~~el~~~l~~~~~~~~~  239 (265)
                       ...+.+.|++++.....
T Consensus       214 ~~~gV~~~l~~~~~~~~~  231 (239)
T 1u02_A          214 EMRKILKFIEMLGVQKKQ  231 (239)
T ss_dssp             HHHHHHHHHHHHHHHHC-
T ss_pred             CHHHHHHHHHHHHHhccc
Confidence             55699999988765443

>3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida}

Probab=99.24  E-value=2.9e-11  Score=99.14  Aligned_cols=86  Identities=16%  Similarity=0.158  Sum_probs=63.8

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCH----HHHHHHHHhcCcccccc-eEEecCceecCCCceEEeeccccccCCC
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQ----FYIETIMEHHGLLGCFS-EIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~----~~i~~~l~~~gl~~~f~-~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      ..+++||+.++|+.|+++|++++|+||+..    ..+...++.+|+..+++ .++-..      +      .        
T Consensus        99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~~~Lilr~------~------~--------  158 (260)
T 3pct_A           99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVNDKTLLLKK------D------K--------  158 (260)
T ss_dssp             CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCSTTTEEEES------S------C--------
T ss_pred             CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCccccceeEecC------C------C--------
Confidence            467899999999999999999999999865    47888899999976653 233210      0      0        


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT  185 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a  185 (265)
                              ..|......+.+. |  ..-+++|||..+|+.+.
T Consensus       159 --------~~K~~~r~~L~~~-g--y~iv~~iGD~~~Dl~~~  189 (260)
T 3pct_A          159 --------SNKSVRFKQVEDM-G--YDIVLFVGDNLNDFGDA  189 (260)
T ss_dssp             --------SSSHHHHHHHHTT-T--CEEEEEEESSGGGGCGG
T ss_pred             --------CChHHHHHHHHhc-C--CCEEEEECCChHHcCcc
Confidence                    1266666666652 3  24599999999999873

>2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A

Probab=99.13  E-value=9e-11  Score=96.15  Aligned_cols=51  Identities=22%  Similarity=0.346  Sum_probs=39.9

Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcC----CCCCcccccCCCCCCeeee
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGD----GRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD----~~~Di~~a~~~~~~~~~~~  196 (265)
                      ..+++.+.+.+|+.+++.+   +|++++++++|||    +.||+.|.+.+|.+++++.
T Consensus       178 ~~leI~~~~~~Kg~al~~l---~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~  232 (246)
T 2amy_A          178 ISFDVFPDGWDKRYCLRHV---ENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT  232 (246)
T ss_dssp             TEEEEEETTCSGGGGGGGT---TTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS
T ss_pred             cEEEEecCCCchHHHHHHH---hCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee
Confidence            3357779999999999999   8999999999999    9999999965444444444

>2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A*

Probab=99.13  E-value=2e-10  Score=95.09  Aligned_cols=49  Identities=18%  Similarity=0.278  Sum_probs=42.1

Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcC----CCCCcccccCCCCCCeee
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGD----GRGDFCPTLKLRDCDFVM  195 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD----~~~Di~~a~~~~~~~~~~  195 (265)
                      .+++.+.+.+|+.+++.+   +|++++++++|||    +.||+.|.+.++..++++
T Consensus       188 ~leI~~~~vsKg~al~~l---~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av  240 (262)
T 2fue_A          188 SFDVFPEGWDKRYCLDSL---DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV  240 (262)
T ss_dssp             CEEEEETTCSTTHHHHHH---TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC
T ss_pred             EEEEecCCCCHHHHHHHH---HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe
Confidence            357789999999999999   8999999999999    999999997655455555

>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*

Probab=99.08  E-value=6.1e-10  Score=95.89  Aligned_cols=60  Identities=8%  Similarity=-0.092  Sum_probs=40.4

Q ss_pred             CCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHH
Q 044617          168 GKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLH  232 (265)
Q Consensus       168 ~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~  232 (265)
                      ++++++||||+. +|+.+|+++|+..+++.. |....... .....++..+   +++.||.+++.+
T Consensus       289 ~~~~~~~VGD~~~~Di~~A~~aG~~ti~V~~-G~~~~~~~-~~~~~pd~vi---~~l~el~~~il~  349 (352)
T 3kc2_A          289 PFHAVFMVGDNPASDIIGAQNYGWNSCLVKT-GVYNEGDD-LKECKPTLIV---NDVFDAVTKTLE  349 (352)
T ss_dssp             TSSEEEEEESCTTTHHHHHHHHTCEEEECSS-SSCCTTCC-CTTCCCSEEC---SSHHHHHHHHHH
T ss_pred             CcceEEEEecCcHHHHHHHHHcCCEEEEEcc-CCCCcccc-cccCCCCEEE---CCHHHHHHHHHH
Confidence            679999999998 699999998887666654 33322211 1112344545   899998887643

>4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A*

Probab=98.85  E-value=1.6e-09  Score=92.18  Aligned_cols=111  Identities=10%  Similarity=-0.005  Sum_probs=70.8

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh----cCcccccceEEecCceecCCC--ceEEeeccccccCCC-
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH----HGLLGCFSEIYTNPTYVDEQG--RLRILPYHDSTLSHH-  143 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~----~gl~~~f~~i~~~~~~~d~~~--~~~~~~~~~~~~kp~-  143 (265)
                      .++|++.++++.|+++|++++|||++..+.++.+.+.    +|+...  .|++....++...  ............++. 
T Consensus       143 ~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e--~ViG~~~~~~~~~~~~~~~~~~~~~dg~y~~  220 (327)
T 4as2_A          143 RVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPE--NVIGVTTLLKNRKTGELTTARKQIAEGKYDP  220 (327)
T ss_dssp             EECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGG--GEEEECEEEECTTTCCEECHHHHHHTTCCCG
T ss_pred             ccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHH--HeEeeeeeeeccccccccccccccccccccc
Confidence            5799999999999999999999999999999999887    465433  6787765444211  000000000000000 


Q ss_pred             -----------cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCccccc
Q 044617          144 -----------GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTL  186 (265)
Q Consensus       144 -----------~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~  186 (265)
                                 ......-+.+|+..+...++.-   ...++++||| ..|+.|+.
T Consensus       221 ~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g---~~Pi~a~Gns~dgD~~ML~  272 (327)
T 4as2_A          221 KANLDLEVTPYLWTPATWMAGKQAAILTYIDRW---KRPILVAGDTPDSDGYMLF  272 (327)
T ss_dssp             GGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSS---CCCSEEEESCHHHHHHHHH
T ss_pred             cccccccccccccccccccCccHHHHHHHHhhC---CCCeEEecCCCCCCHHHHh
Confidence                       0000122456888888877432   2358999999 58998883

>2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25

Probab=98.79  E-value=1.3e-08  Score=75.73  Aligned_cols=64  Identities=16%  Similarity=0.083  Sum_probs=49.2

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI   80 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l   80 (265)
                      |.+++|+||+||||+++..                                    .           .-..+.|++.+.|
T Consensus         1 m~~k~i~~DlDGTL~~~~~------------------------------------~-----------~i~~~~~~~~~al   33 (142)
T 2obb_A            1 SNAMTIAVDFDGTIVEHRY------------------------------------P-----------RIGEEIPFAVETL   33 (142)
T ss_dssp             -CCCEEEECCBTTTBCSCT------------------------------------T-----------SCCCBCTTHHHHH
T ss_pred             CCCeEEEEECcCCCCCCCC------------------------------------c-----------cccccCHHHHHHH
Confidence            6679999999999999732                                    0           0113467999999


Q ss_pred             HHHHHcCCcEEEEeCCC---HHHHHHHHHhcCcc
Q 044617           81 KSAHSLGCDLKIVSDAN---QFYIETIMEHHGLL  111 (265)
Q Consensus        81 ~~l~~~g~~~~ivS~~~---~~~i~~~l~~~gl~  111 (265)
                      +.++++|+.++|+|++.   ...+...++.+|+.
T Consensus        34 ~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~   67 (142)
T 2obb_A           34 KLLQQEKHRLILWSVREGELLDEAIEWCRARGLE   67 (142)
T ss_dssp             HHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred             HHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence            99999999999999987   44556666777774

>3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.52  E-value=1.5e-07  Score=87.41  Aligned_cols=87  Identities=15%  Similarity=0.183  Sum_probs=70.7

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      ++.|++.+.|+.|+++|++++++|+.....+..+.+.+|+.    .+++.              ..     |        
T Consensus       457 ~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----~~~~~--------------~~-----P--------  505 (645)
T 3j08_A          457 TLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----LVIAE--------------VL-----P--------  505 (645)
T ss_dssp             CCTTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----EEECS--------------CC-----T--------
T ss_pred             CchhHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC----EEEEe--------------CC-----H--------
Confidence            68899999999999999999999999999999999999975    33332              00     1        


Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                       ..|...++.+.++     ++++||||+.||+.|.+.   ++++++-
T Consensus       506 -~~K~~~v~~l~~~-----~~v~~vGDg~ND~~al~~---A~vgiam  543 (645)
T 3j08_A          506 -HQKSEEVKKLQAK-----EVVAFVGDGINDAPALAQ---ADLGIAV  543 (645)
T ss_dssp             -TCHHHHHHHHTTT-----CCEEEEECSSSCHHHHHH---SSEEEEE
T ss_pred             -HhHHHHHHHHhhC-----CeEEEEeCCHhHHHHHHh---CCEEEEe
Confidence             1389999888765     689999999999999954   5555553

>3qle_A TIM50P; chaperone, mitochondrion, preprotein translocation; HET: 1PE; 1.83A {Saccharomyces cerevisiae EC1118}

Probab=98.49  E-value=1.8e-07  Score=74.01  Aligned_cols=87  Identities=9%  Similarity=0.033  Sum_probs=64.8

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc-cccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL-GCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~-~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ....||+.++|+.+. ++++++|.|++...++..+++.++.. .+|...+..+......|.                   
T Consensus        58 v~~RPgl~eFL~~l~-~~yeivI~Tas~~~ya~~vl~~LDp~~~~f~~rl~R~~c~~~~g~-------------------  117 (204)
T 3qle_A           58 TAKRPGADYFLGYLS-QYYEIVLFSSNYMMYSDKIAEKLDPIHAFVSYNLFKEHCVYKDGV-------------------  117 (204)
T ss_dssp             EEECTTHHHHHHHHT-TTEEEEEECSSCHHHHHHHHHHTSTTCSSEEEEECGGGSEEETTE-------------------
T ss_pred             EEeCCCHHHHHHHHH-hCCEEEEEcCCcHHHHHHHHHHhCCCCCeEEEEEEecceeEECCe-------------------
Confidence            567899999999998 57999999999999999999999986 477765553211100110                   


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccc
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPT  185 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a  185 (265)
                               +.+-++.+|.+++++++|.|+.+-+...
T Consensus       118 ---------y~KdL~~Lgrdl~~vIiIDDsp~~~~~~  145 (204)
T 3qle_A          118 ---------HIKDLSKLNRDLSKVIIIDTDPNSYKLQ  145 (204)
T ss_dssp             ---------EECCGGGSCSCGGGEEEEESCTTTTTTC
T ss_pred             ---------eeecHHHhCCChHHEEEEECCHHHHhhC
Confidence                     1122556688999999999999877544

>1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18

Probab=98.42  E-value=3.6e-07  Score=66.82  Aligned_cols=30  Identities=20%  Similarity=0.249  Sum_probs=26.4

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHH
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQF   99 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~   99 (265)
                      ..+.+++.+.|+.++++|++++++||+...
T Consensus        23 ~~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~   52 (126)
T 1xpj_A           23 VLPRLDVIEQLREYHQLGFEIVISTARNMR   52 (126)
T ss_dssp             CCBCHHHHHHHHHHHHTTCEEEEEECTTTT
T ss_pred             CCCCHHHHHHHHHHHhCCCeEEEEeCCChh
Confidence            456799999999999999999999998654

>3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus}

Probab=98.40  E-value=4.7e-07  Score=85.15  Aligned_cols=89  Identities=15%  Similarity=0.163  Sum_probs=71.8

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      -++.|++.+.|+.|+++|++++++|+.....+..+.+.+|+.    .+++.              ..     |       
T Consensus       534 D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi~----~~~~~--------------~~-----P-------  583 (723)
T 3j09_A          534 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----LVIAE--------------VL-----P-------  583 (723)
T ss_dssp             CCSCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----EEECS--------------CC-----T-------
T ss_pred             CCcchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCc----EEEcc--------------CC-----H-------
Confidence            368899999999999999999999999999999999999975    34432              00     1       


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                        ..|...++.+.++     ++++||||+.||+.|.+.   ++++++-+
T Consensus       584 --~~K~~~v~~l~~~-----~~v~~vGDg~ND~~al~~---A~vgiamg  622 (723)
T 3j09_A          584 --HQKSEEVKKLQAK-----EVVAFVGDGINDAPALAQ---ADLGIAVG  622 (723)
T ss_dssp             --TCHHHHHHHHTTT-----CCEEEEECSSTTHHHHHH---SSEEEECC
T ss_pred             --HHHHHHHHHHhcC-----CeEEEEECChhhHHHHhh---CCEEEEeC
Confidence              1389999888765     689999999999999954   55666643

>2jc9_A Cytosolic purine 5'-nucleotidase; cytosolic 5-prime nucleotidase II, GMP-IMP specific nucleotidase, CN-II, NT5C2, hydrolase, polymorphism; HET: ADN; 1.5A {Homo sapiens} PDB: 2j2c_A* 2xje_A* 2xjf_A* 2jcm_A* 2xcw_A* 2xcv_A* 2xcx_A 2xjb_A* 2xjc_A* 2xjd_A*

Probab=98.37  E-value=1.3e-06  Score=78.07  Aligned_cols=124  Identities=17%  Similarity=0.286  Sum_probs=79.9

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc-C-------------cccccceEEecC---ceecCCCceEE
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH-G-------------LLGCFSEIYTNP---TYVDEQGRLRI  132 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~-g-------------l~~~f~~i~~~~---~~~d~~~~~~~  132 (265)
                      +...|++..+|+.|++.| +++|+||+...++..+++.+ |             +.++|+.|+...   ..+. .+..-.
T Consensus       245 v~kdp~l~~~L~~Lr~~G-KlfLiTNS~~~yv~~~m~yllg~~~~~~~~~~~~dWrdlFD~vI~~A~KP~FF~-~~~pfr  322 (555)
T 2jc9_A          245 VVKDGKLPLLLSRMKEVG-KVFLATNSDYKYTDKIMTYLFDFPHGPKPGSSHRPWQSYFDLILVDARKPLFFG-EGTVLR  322 (555)
T ss_dssp             BCCCTHHHHHHHHHHHHS-EEEEECSSCHHHHHHHHHHHTCSSSSSSTTSCCCCGGGGCSEEEESCCTTGGGT-TCCCEE
T ss_pred             cCCChHHHHHHHHHHHcC-CEEEEeCCChHHHHHHHHHhcCCCccccccccccchhhhCCEEEEeCCCCCccc-CCCcce
Confidence            345689999999999999 99999999999999999886 6             456788855531   1111 111000


Q ss_pred             eeccccccCCCcccccCCCCchHHH-----HHHHHHhcCCCCceEEEEcCCC-CCccccc-CCCCCCeeeec
Q 044617          133 LPYHDSTLSHHGCNLCPSNLCKGFV-----LDHVCTSFGCGKQRFIYLGDGR-GDFCPTL-KLRDCDFVMPR  197 (265)
Q Consensus       133 ~~~~~~~~kp~~~~~~~~~~~K~~~-----i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~-~~~~~~~~~~~  197 (265)
                       .......+...... .....++.+     +..+++.+|+..++++||||.. +||..++ ++|+.++.+..
T Consensus       323 -~Vd~~tg~l~~~~~-~~~l~~g~vY~gGn~~~~~~llg~~g~eVLYVGDhIftDIl~~kk~~GWrTiLViP  392 (555)
T 2jc9_A          323 -QVDTKTGKLKIGTY-TGPLQHGIVYSGGSSDTICDLLGAKGKDILYIGDHIFGDILKSKKRQGWRTFLVIP  392 (555)
T ss_dssp             -EEETTTTEECSSCC-CSCCCTTCCEEECCHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHHCCEEEEECT
T ss_pred             -EeecCCCccccccc-cccccCCceeccCCHHHHHHHhCCCCCeEEEECCEehHhHHhHHhhcCeEEEEEEe
Confidence             00000000000000 000112222     4788888899999999999995 9998886 77888877774

>3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp}

Probab=98.25  E-value=2e-06  Score=80.71  Aligned_cols=89  Identities=15%  Similarity=0.209  Sum_probs=71.0

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCC
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPS  150 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~  150 (265)
                      ++.|++++.|+.|+++|++++++|+.....+..+.+.+|+.+    +++.   +.        |.               
T Consensus       554 ~i~~~~~~aI~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi~~----v~a~---~~--------P~---------------  603 (736)
T 3rfu_A          554 PIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGIKK----VVAE---IM--------PE---------------  603 (736)
T ss_dssp             CBCSSHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHTCCC----EECS---CC--------HH---------------
T ss_pred             cchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCE----EEEe---cC--------HH---------------
Confidence            678999999999999999999999999999999999999764    3332   00        11               


Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                        .|...++.+.++    .+.++||||+.||..|.+   .++++++-+
T Consensus       604 --~K~~~v~~l~~~----g~~V~~vGDG~ND~paL~---~AdvGIAmg  642 (736)
T 3rfu_A          604 --DKSRIVSELKDK----GLIVAMAGDGVNDAPALA---KADIGIAMG  642 (736)
T ss_dssp             --HHHHHHHHHHHH----SCCEEEEECSSTTHHHHH---HSSEEEEES
T ss_pred             --HHHHHHHHHHhc----CCEEEEEECChHhHHHHH---hCCEEEEeC
Confidence              288888888775    367999999999999984   455566543

>3ef0_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, ALF4, transition state analog, cobalt, magnesium; 2.10A {Schizosaccharomyces pombe}

Probab=98.22  E-value=6.3e-07  Score=77.30  Aligned_cols=82  Identities=12%  Similarity=0.195  Sum_probs=60.3

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-ccc-eEEecCceecCCCceEEeeccccccCCCccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CFS-EIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f~-~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      .+.+.||+.++|+.+. +++.++|.|++...++..+++.++... +|. .+++.+    ..|.    .+           
T Consensus        73 ~v~~RPg~~eFL~~l~-~~yeivI~Tas~~~yA~~vl~~LDp~~~~f~~ri~sr~----~~g~----~~-----------  132 (372)
T 3ef0_A           73 YIKFRPGLAQFLQKIS-ELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRD----DSGS----LA-----------  132 (372)
T ss_dssp             EEEECTTHHHHHHHHH-TTEEEEEECSSCHHHHHHHHHHHCTTSCSSSSCEECTT----TSSC----SS-----------
T ss_pred             EEEECcCHHHHHHHHh-cCcEEEEEeCCcHHHHHHHHHHhccCCceeeeEEEEec----CCCC----cc-----------
Confidence            4577999999999999 579999999999999999999999876 665 455431    0010    00           


Q ss_pred             ccCCCCchHHHHHHHHHhc-CCCCceEEEEcCCCCCc
Q 044617          147 LCPSNLCKGFVLDHVCTSF-GCGKQRFIYLGDGRGDF  182 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~-gi~~~~~v~vGD~~~Di  182 (265)
                            .|.      ++.+ |.+++++++|.|++.-.
T Consensus       133 ------~Kd------L~~L~~~dl~~viiiDd~~~~~  157 (372)
T 3ef0_A          133 ------QKS------LRRLFPCDTSMVVVIDDRGDVW  157 (372)
T ss_dssp             ------CCC------GGGTCSSCCTTEEEEESCSGGG
T ss_pred             ------eec------HHHhcCCCCceEEEEeCCHHHc
Confidence                  021      3433 78899999999997533

>3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ...

Probab=98.18  E-value=6.2e-06  Score=80.24  Aligned_cols=141  Identities=13%  Similarity=0.109  Sum_probs=83.8

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccce----EEecCceecCCCceEEeeccccccCC-Ccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE----IYTNPTYVDEQGRLRILPYHDSTLSH-HGC  145 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~----i~~~~~~~d~~~~~~~~~~~~~~~kp-~~~  145 (265)
                      ++.|++.+.|+.|++.|+++.++|+.....+..+.+.+|+......    ++.... ++.-.. .  .......+. -.+
T Consensus       603 ~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~-~~~l~~-~--~~~~~~~~~~v~~  678 (995)
T 3ar4_A          603 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGRE-FDDLPL-A--EQREACRRACCFA  678 (995)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHH-HHTSCH-H--HHHHHHHHCCEEE
T ss_pred             CCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchh-hhhCCH-H--HHHHHHhhCcEEE
Confidence            6789999999999999999999999999999999999998643211    111100 000000 0  000000000 000


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC-CCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK-NYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      +.  ....|...++.+.++ |   +.+.|+|||.||+.|.++   ++++++-+ |...   .++.   .+... .-+++.
T Consensus       679 r~--~P~~K~~~v~~l~~~-g---~~v~~~GDG~ND~~alk~---Advgiamg~g~~~---ak~a---Ad~vl-~~~~~~  742 (995)
T 3ar4_A          679 RV--EPSHKSKIVEYLQSY-D---EITAMTGDGVNDAPALKK---AEIGIAMGSGTAV---AKTA---SEMVL-ADDNFS  742 (995)
T ss_dssp             SC--CSSHHHHHHHHHHTT-T---CCEEEEECSGGGHHHHHH---STEEEEETTSCHH---HHHT---CSEEE-TTCCHH
T ss_pred             Ee--CHHHHHHHHHHHHHC-C---CEEEEEcCCchhHHHHHH---CCeEEEeCCCCHH---HHHh---CCEEE-CCCCHH
Confidence            00  012488889888876 3   689999999999999854   55555543 2222   2221   23333 225677


Q ss_pred             HHHHHHH
Q 044617          225 ELKKILL  231 (265)
Q Consensus       225 el~~~l~  231 (265)
                      .|...++
T Consensus       743 ~i~~~i~  749 (995)
T 3ar4_A          743 TIVAAVE  749 (995)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7776553

>1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1

Probab=97.95  E-value=1.5e-05  Score=76.55  Aligned_cols=116  Identities=16%  Similarity=0.123  Sum_probs=72.6

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec-CceecCCCceEEeeccccccCCCc-cccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN-PTYVDEQGRLRILPYHDSTLSHHG-CNLC  148 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~-~~~~d~~~~~~~~~~~~~~~kp~~-~~~~  148 (265)
                      ++.|++++.++.|++.|+++.++|+.....+..+.+++|+....   +.. ...+................+... ++. 
T Consensus       535 p~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA~aIA~~lGI~~~~---~~~~~~~~~g~~~~~~~el~~~~~~~~V~arv-  610 (920)
T 1mhs_A          535 PPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETSRQLGLGTNI---YNAERLGLGGGGDMPGSEVYDFVEAADGFAEV-  610 (920)
T ss_dssp             CCCHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHTSSCSC---CCSSSSSSCBCCCGGGGGGGTTTTTTSCEESC-
T ss_pred             cccccHHHHHHHHhhcCceEEEEcCCCHHHHHHHHHHcCCCccc---cCccceeecCcccCCHHHHHHHHhhCeEEEEe-
Confidence            67899999999999999999999999999999999999985311   000 000000000000000000000000 011 


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                       ....|...++.+.++ |   +.+.|+|||.||..|.+   .++++++-+
T Consensus       611 -~P~~K~~iV~~Lq~~-g---~~Vam~GDGvNDapaLk---~AdvGIAmg  652 (920)
T 1mhs_A          611 -FPQHKYNVVEILQQR-G---YLVAMTGDGVNDAPSLK---KADTGIAVE  652 (920)
T ss_dssp             -CSTHHHHHHHHHHTT-T---CCCEECCCCGGGHHHHH---HSSEEEEET
T ss_pred             -CHHHHHHHHHHHHhC-C---CeEEEEcCCcccHHHHH---hCCcCcccc
Confidence             113589999988765 3   67999999999999984   456666543

>2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A

Probab=97.83  E-value=5.3e-05  Score=73.94  Aligned_cols=41  Identities=20%  Similarity=0.348  Sum_probs=38.7

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL  111 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~  111 (265)
                      ++.|++.+.|+.|++.|+++.++|+.....+..+.+.+|+.
T Consensus       599 plr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~  639 (1028)
T 2zxe_A          599 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGII  639 (1028)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSS
T ss_pred             CCChhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999999999985

>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A

Probab=97.82  E-value=8.5e-05  Score=72.55  Aligned_cols=41  Identities=17%  Similarity=0.332  Sum_probs=38.7

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL  111 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~  111 (265)
                      ++.|++++.|+.|++.|+++.++|+.....+..+.+.+|+.
T Consensus       604 p~r~~~~~aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~  644 (1034)
T 3ixz_A          604 PPRATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII  644 (1034)
T ss_pred             CCchhHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence            67899999999999999999999999999999999999984

>3shq_A UBLCP1; phosphatase, hydrolase; 1.96A {Drosophila melanogaster}

Probab=97.74  E-value=6.3e-05  Score=63.55  Aligned_cols=42  Identities=21%  Similarity=0.199  Sum_probs=37.5

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGC  113 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~  113 (265)
                      ...||+.++|+++.+ .|.++|.|++...++..+++.++....
T Consensus       164 ~~RP~l~eFL~~l~~-~yeivIfTas~~~ya~~vld~Ld~~~~  205 (320)
T 3shq_A          164 LMRPYLHEFLTSAYE-DYDIVIWSATSMRWIEEKMRLLGVASN  205 (320)
T ss_dssp             HBCTTHHHHHHHHHH-HEEEEEECSSCHHHHHHHHHHTTCTTC
T ss_pred             EeCCCHHHHHHHHHh-CCEEEEEcCCcHHHHHHHHHHhCCCCC
Confidence            458999999999996 599999999999999999999987544

>3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana}

Probab=97.65  E-value=2.2e-05  Score=75.25  Aligned_cols=114  Identities=17%  Similarity=0.181  Sum_probs=70.4

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccc-cc-e-EEecCceecCCCceEEeeccccccCCCc-cc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGC-FS-E-IYTNPTYVDEQGRLRILPYHDSTLSHHG-CN  146 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~-f~-~-i~~~~~~~d~~~~~~~~~~~~~~~kp~~-~~  146 (265)
                      ++.|++++.++.|++.|+++.++|+.....+..+.+++|+... ++ . +.+.+  .++.  +.-.+......+... ++
T Consensus       488 p~R~~a~~aI~~l~~aGI~v~MiTGD~~~tA~~iA~~lGi~~~~~~~~~l~g~~--~~~~--~~~~~l~~~~~~~~v~ar  563 (885)
T 3b8c_A          488 PPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGTH--KDAN--LASIPVEELIEKADGFAG  563 (885)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCEEEESSCHHHHTHHHHTTTCTTCCSTTSSCCBGG--GGTT--SCCSCHHHHHHTSCCEEC
T ss_pred             ccchhHHHHHHHHHHcCCcEEEEcCCChHHHHHHHHHhCCccccCCcceeeccc--cccc--cchhHHHHHHhhCcEEEE
Confidence            5789999999999999999999999999999999999998431 00 0 11100  0000  000000000000000 00


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      .  ....|...++.+.++ |   +.+.|+|||.||..|.++   ++++++-
T Consensus       564 v--~P~~K~~iV~~lq~~-g---~~Vam~GDGvNDapaLk~---AdvGIAm  605 (885)
T 3b8c_A          564 V--FPEHKYEIVKKLQER-K---HIVGMTGDGVNDAPALKK---ADIGIAV  605 (885)
T ss_dssp             C--CHHHHHHHHHHHHHT-T---CCCCBCCCSSTTHHHHHH---SSSCCCC
T ss_pred             E--CHHHHHHHHHHHHHC-C---CeEEEEcCCchhHHHHHh---CCEeEEe
Confidence            0  012488999988875 3   578999999999998854   4444443

>4g63_A Cytosolic IMP-GMP specific 5'-nucleotidase; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.70A {Legionella pneumophila subsp} PDB: 2bde_A

Probab=97.33  E-value=0.00073  Score=59.67  Aligned_cols=115  Identities=17%  Similarity=0.258  Sum_probs=75.4

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-c--------CcccccceEEecC---ceec----------CCCc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-H--------GLLGCFSEIYTNP---TYVD----------EQGR  129 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~--------gl~~~f~~i~~~~---~~~d----------~~~~  129 (265)
                      -.|....+|+.|++.|-+++++||+.-.++...+.. +        .+.++||.|+...   ..+.          ++|.
T Consensus       187 k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~M~y~~~~~~~~g~dWrdlFDvVIv~A~KP~FF~~~~~~~~v~~~~g~  266 (470)
T 4g63_A          187 REKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGT  266 (470)
T ss_dssp             CCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHTGGGSCTTCCGGGGCSEEEESCCTTHHHHSCCCEEEECTTTCC
T ss_pred             CCHhHHHHHHHHHHcCCeEEEeeCCCchHHHHHHHhhcccCCCCCCChhhhcCEEEECCCCCCcccCCCcceEEECCCCc
Confidence            368899999999999999999999999999988876 3        4778999888642   1111          1122


Q ss_pred             eEEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCccccc-CCCCCCeeeec
Q 044617          130 LRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTL-KLRDCDFVMPR  197 (265)
Q Consensus       130 ~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~-~~~~~~~~~~~  197 (265)
                      +..  .. ...+|.   +.     ...-+..+.+-+|....+++||||+. .|+..++ ..|+.+++++.
T Consensus       267 l~~--~~-~~~~~~---vY-----~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~  325 (470)
T 4g63_A          267 MTN--VH-GPIVPG---VY-----QGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE  325 (470)
T ss_dssp             EEE--CC-SSCCSE---EE-----EECCHHHHHHHTTCCGGGEEEEESCCCSCHHHHHHSCCCEEEEECT
T ss_pred             ccc--cc-cccCCc---ee-----ecCcHHHHHHHhCCCCCeEEEECCchHHHHHhhhhccCCeEEEEhH
Confidence            110  00 001110   00     12224455666677888999999995 9986554 34666666664

>3ef1_A RNA polymerase II subunit A C-terminal domain phosphatase; CTD, FCPH, BRCT, hydrolase, BEF3, acylphosphate analog, cobalt, magnesium; HET: BFD; 2.15A {Schizosaccharomyces pombe}

Probab=96.68  E-value=0.00022  Score=62.48  Aligned_cols=50  Identities=12%  Similarity=0.202  Sum_probs=42.4

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccc-ccce-EEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLG-CFSE-IYT  119 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~-~f~~-i~~  119 (265)
                      .+.+.||+.++|+.+.+ .|.++|.|.+...|+..+++.++... +|.. +++
T Consensus        81 ~V~~RPgl~eFL~~ls~-~yEivIfTas~~~YA~~Vl~~LDp~~~~f~~Rl~s  132 (442)
T 3ef1_A           81 YIKFRPGLAQFLQKISE-LYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLS  132 (442)
T ss_dssp             EEEECTTHHHHHHHHTT-TEEEEEECSSCHHHHHHHHHHHCTTSTTTTTCEEC
T ss_pred             EEEeCCCHHHHHHHHhC-CcEEEEEcCCCHHHHHHHHHHhccCCccccceEEE
Confidence            45679999999999995 69999999999999999999998766 5654 444

>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}

Probab=94.12  E-value=0.23  Score=40.41  Aligned_cols=48  Identities=17%  Similarity=0.176  Sum_probs=39.5

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeC---CCHHHHHHHHHhcCcc-cccceEEe
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSD---ANQFYIETIMEHHGLL-GCFSEIYT  119 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~---~~~~~i~~~l~~~gl~-~~f~~i~~  119 (265)
                      +.+++.+.|+.++++|++++++||   .....+...++.+|+. ..++.+++
T Consensus        31 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~~~~~~~ii~   82 (284)
T 2hx1_A           31 LLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLFSITADKIIS   82 (284)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCTTCCGGGEEE
T ss_pred             eChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcCCCCHhhEEc
Confidence            468999999999999999999998   5566777888889987 66666665

>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}

Probab=92.31  E-value=0.56  Score=37.70  Aligned_cols=47  Identities=17%  Similarity=0.053  Sum_probs=34.1

Q ss_pred             ChhHHHHHHHHHHcCCcEEEEeCCCHHHHHH---HHHhcCcccccceEEe
Q 044617           73 DSHVAAAIKSAHSLGCDLKIVSDANQFYIET---IMEHHGLLGCFSEIYT  119 (265)
Q Consensus        73 ~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~---~l~~~gl~~~f~~i~~  119 (265)
                      .+++.+.|+.++++|++++++||+.......   .++.+|+....+.+++
T Consensus        19 ~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~~~~~i~~   68 (263)
T 1zjj_A           19 IPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVSSSIIIT   68 (263)
T ss_dssp             CTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCCCGGGEEE
T ss_pred             CccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEEe
Confidence            3789999999999999999999987544333   3445677544445554

>2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A*

Probab=90.29  E-value=1.3  Score=36.32  Aligned_cols=40  Identities=10%  Similarity=0.013  Sum_probs=33.6

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeC---CCHHHHHHHHHhcCcc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSD---ANQFYIETIMEHHGLL  111 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~---~~~~~i~~~l~~~gl~  111 (265)
                      +.|++.+.|+.|+++|++++++||   .....+...++.+|+.
T Consensus        38 ~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~   80 (306)
T 2oyc_A           38 AVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG   80 (306)
T ss_dssp             ECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred             cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence            468899999999999999999996   4566677778888875

>3geb_A EYES absent homolog 2; hydrolase, activator, alternative splicing, cytoplasm, developmental protein, magnesium, nucleus, polymorphism; 2.40A {Homo sapiens} PDB: 3hb0_A 3hb1_A

Probab=89.23  E-value=1.5  Score=35.19  Aligned_cols=89  Identities=19%  Similarity=0.243  Sum_probs=55.7

Q ss_pred             HHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHhcCcccccc--eEEecCceecCCCceEEeeccccccCCCcccccCCCC
Q 044617           76 VAAAIKSAHSLG-CDLKIVSDANQFYIETIMEHHGLLGCFS--EIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNL  152 (265)
Q Consensus        76 ~~e~l~~l~~~g-~~~~ivS~~~~~~i~~~l~~~gl~~~f~--~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~  152 (265)
                      +...|....++. .--++||++..--.-..+=-+|+..+|.  .||++                             ...
T Consensus       164 a~k~L~~i~sr~~~vNVLVTs~qLVPaLaK~LLygL~~~fpieNIYSa-----------------------------~ki  214 (274)
T 3geb_A          164 SLKALNLINSRPNCVNVLVTTTQLIPALAKVLLYGLGSVFPIENIYSA-----------------------------TKT  214 (274)
T ss_dssp             HHHHHHHHHHSTTEEEEEEESSCHHHHHHHHHHTTCTTTSCGGGEEET-----------------------------TTT
T ss_pred             HHHHHHhhccCCceeEEEEecCchHHHHHHHHHhhcccceecccccch-----------------------------hhc
Confidence            344444444443 3446778775433333333457766654  36663                             134


Q ss_pred             chHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          153 CKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       153 ~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      +|..-++++.+++|-. -.-++||||.---++|+.   .+..|.+
T Consensus       215 GKesCFerI~~RFG~k-~~yvvIGDG~eEe~AAk~---~n~PFwr  255 (274)
T 3geb_A          215 GKESCFERIMQRFGRK-AVYVVIGDGVEEEQGAKK---HNMPFWR  255 (274)
T ss_dssp             CHHHHHHHHHHHHCTT-SEEEEEESSHHHHHHHHH---TTCCEEE
T ss_pred             CHHHHHHHHHHHhCCC-ceEEEECCCHHHHHHHHH---cCCCeEE
Confidence            5999999999999844 578899999888888855   3344544

>1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13

Probab=80.10  E-value=0.61  Score=40.17  Aligned_cols=17  Identities=18%  Similarity=0.481  Sum_probs=14.7

Q ss_pred             ceEEEEecCCCCCCCCc
Q 044617            3 DVVVVFDFDRTLIDDDS   19 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~   19 (265)
                      +|.|+||+||++++...
T Consensus         1 ~~~~~fdvdgv~~~~~~   17 (384)
T 1qyi_A            1 MKKILFDVDGVFLSEER   17 (384)
T ss_dssp             CCEEEECSBTTTBCSHH
T ss_pred             CceEEEecCceeechhh
Confidence            38899999999999853

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	265
d2feaa1	226	c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio	1e-11
d2bdua1	291	c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III	1e-08
d1j97a_	210	c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon	1e-05
d1nnla_	217	c.108.1.4 (A:) Phosphoserine phosphatase {Human (H	1e-05

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

 Score = 60.8 bits (146), Expect = 1e-11
 Identities = 30/195 (15%), Positives = 52/195 (26%), Gaps = 16/195 (8%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMG---LTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVE 61
            ++ DFD T+  +D+   ++          L + + S           M  L       E
Sbjct: 6   FIICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRMFGLLPSSLKEE 65

Query: 62  DIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNP 121
             +  L    +       +   +       ++S    F++  ++E           Y N 
Sbjct: 66  ITSFVLEDAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRI---YCNH 122

Query: 122 TYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGD 181
              D        P+       + C  C            V        Q  I +GD   D
Sbjct: 123 ASFDNDYIHIDWPHSCKGTCSNQCGCC---------KPSVIHELSEPNQYIIMIGDSVTD 173

Query: 182 FCPTLKLRDCDFVMP 196
                KL D  F   
Sbjct: 174 -VEAAKLSDLCFARD 187

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.3 bits (125), Expect = 1e-08
 Identities = 34/222 (15%), Positives = 56/222 (25%), Gaps = 43/222 (19%)

Query: 6   VVFDFDRTLIDDDSDNWVV----------------TQMGLTHLFNQLRSTLPWNSL---- 45
           ++ DFD TL     +                     +  L  L  Q  +      L    
Sbjct: 40  IITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTDECRRKLLQLKEQYYAIEVDPVLTVEE 99

Query: 46  MDRMMKE--------LHSQGKTVEDIANCLRQCP--LDSHVAAAIKSAHSLGCDLKIVSD 95
               M E        L  QG     +   +      L              G  + I S 
Sbjct: 100 KFPYMVEWYTKSHGLLIEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSA 159

Query: 96  ANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKG 155
                +E ++   G+     ++ +N    DE G L+                      K 
Sbjct: 160 GIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKGFKGE-----------LIHVFNKH 208

Query: 156 FVLDHVCTSFGCGKQR--FIYLGDGRGDFCPTLKLRDCDFVM 195
                    F   K     I LGD +GD      + + + ++
Sbjct: 209 DGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHIL 250

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 43.3 bits (100), Expect = 1e-05
 Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 19/194 (9%)

Query: 5   VVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHS---QGKTVE 61
           +++FDFD TL+++++ + +  + G+     ++        L             +   +E
Sbjct: 6   LILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIE 65

Query: 62  DIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNP 121
            +   +++          IK   + G  + +VS      +  I E  GL   F+      
Sbjct: 66  KVEKAIKRITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN----- 120

Query: 122 TYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGD 181
                      L   D  L+            KG +L+ +    G   +  + +GDG  D
Sbjct: 121 ----------RLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGAND 170

Query: 182 FCPTLKLRDCDFVM 195
                K        
Sbjct: 171 I-SMFKKAGLKIAF 183

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (99), Expect = 1e-05
 Identities = 21/182 (11%), Positives = 54/182 (29%), Gaps = 19/182 (10%)

Query: 6   VVFDFDRTLIDDDSDNWVVTQMGLTHLFNQL-----RSTLPWNSLMDRMMKELHSQGKTV 60
           V FD D T+I ++  + +    G+    +++        +P+ + +   +  +    + V
Sbjct: 13  VCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQPSREQV 72

Query: 61  EDIANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN 120
           + +    +   L   +   +         + ++S   +  +E +                
Sbjct: 73  QRLI-AEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLN----------I 121

Query: 121 PTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRG 180
           P       RL+     +            S      +            ++ I +GDG  
Sbjct: 122 PATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKE---KFHFKKIIMIGDGAT 178

Query: 181 DF 182
           D 
Sbjct: 179 DM 180

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	265
d2hsza1	224	Phosphoglycolate phosphatase Gph {Haemophilus somn	99.91
d1te2a_	218	Phosphatase YniC {Escherichia coli [TaxId: 562]}	99.91
d2hdoa1	207	Phosphoglycolate phosphatase {Lactobacillus planta	99.91
d2go7a1	204	Hypothetical protein SP2064 {Streptococcus pneumon	99.91
d2feaa1	226	2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate	99.91
d2ah5a1	210	predicted phosphatase SP0104 {Streptococcus pneumo	99.9
d1swva_	257	Phosphonoacetaldehyde hydrolase {Bacillus cereus [	99.89
d2hcfa1	228	Hypothetical protein CT1708 {Chlorobium tepidum [T	99.89
d1x42a1	230	Hypothetical protein PH0459 {Archaeon Pyrococcus h	99.89
d1nnla_	217	Phosphoserine phosphatase {Human (Homo sapiens) [T	99.89
d2gfha1	247	N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m	99.88
d1qq5a_	245	L-2-Haloacid dehalogenase, HAD {Xanthobacter autot	99.86
d2fi1a1	187	Putative hydrolase SP0805 {Streptococcus pneumonia	99.86
d1zrna_	220	L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s	99.86
d1o08a_	221	beta-Phosphoglucomutase {Lactococcus lactis [TaxId	99.85
d2fdra1	222	Hypothetical protein Atu0790 {Agrobacterium tumefa	99.84
d1j97a_	210	Phosphoserine phosphatase {Archaeon Methanococcus	99.82
d1u7pa_	164	Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu	99.82
d1zs9a1	253	E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}	99.81
d2gmwa1	182	D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc	99.81
d1cr6a1	222	Epoxide hydrolase, N-terminal domain {Mouse (Mus m	99.8
d1rkua_	206	Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta	99.78
d1zd3a1	225	Epoxide hydrolase, N-terminal domain {Human (Homo	99.77
d2o2xa1	209	Hypothetical protein Mll2559 {Mesorhizobium loti [	99.77
d2b0ca1	197	Putative phosphatase YihX {Escherichia coli [TaxId	99.75
d2fpwa1	161	Histidine biosynthesis bifunctional protein HisB,	99.75
d1wr8a_	230	Phosphoglycolate phosphatase, PGPase {Pyrococcus h	99.7
d2c4na1	250	NagD {Escherichia coli [TaxId: 562]}	99.7
d1rkqa_	271	Hypothetical protein YidA {Escherichia coli [TaxId	99.67
d1nrwa_	285	Hypothetical protein YwpJ {Bacillus subtilis [TaxI	99.67
d2bdua1	291	Cytosolic 5'-nucleotidase III {Mouse (Mus musculus	99.65
d1l6ra_	225	Phosphoglycolate phosphatase, PGPase {Archaeon The	99.65
d1rlma_	269	Sugar phosphatase SupH (YbiV) {Escherichia coli [T	99.63
d2g80a1	225	Protein UTR4 {Baker's yeast (Saccharomyces cerevis	99.63
d1vjra_	261	Hypothetical protein TM1742 {Thermotoga maritima [	99.63
d1yv9a1	253	Putative hydrolase EF1188 {Enterococcus faecalis [	99.57
d1wzca1	243	Putative mannosyl-3-phosphoglycerate phosphatase M	99.57
d1wvia_	253	Putative phosphatase SMU.1415c {Streptococcus muta	99.55
d2rbka1	260	Sugar-phosphate phosphatase BT4131 {Bacteroides th	99.53
d2b30a1	283	PFL1270w orthologue {Plasmodium vivax [TaxId: 5855	99.51
d1xvia_	232	Putative mannosyl-3-phosphoglycerate phosphatase M	99.5
d1nf2a_	267	Hypothetical protein TM0651 {Thermotoga maritima [	99.5
d1s2oa1	244	Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc	99.48
d1ltqa1	149	Polynucleotide kinase, phosphatase domain {Bacteri	99.42
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	99.36
d2amya1	243	Phosphomannomutase 2 {Human (Homo sapiens) [TaxId:	99.35
d1u02a_	229	Trehalose-6-phosphate phosphatase related protein	99.35
d2fuea1	244	Phosphomannomutase 1 {Human (Homo sapiens) [TaxId:	99.23
d1yj5a1	195	5' polynucleotide kinase-3' phosphatase, middle do	99.22
d1k1ea_	177	Probable phosphatase YrbI {Haemophilus influenzae,	99.15
d2b8ea1	135	Cation-transporting ATPase {Archaeon Archaeoglobus	98.96
d2b82a1	209	Class B acid phosphatase, AphA {Escherichia coli [	98.75
d1y8aa1	308	Hypothetical protein AF1437 {Archaeon Archaeoglobu	98.38
d1wpga2	168	Calcium ATPase, catalytic domain P {Rabbit (Orycto	98.36
d1xpja_	124	Hypothetical protein VC0232 {Vibrio cholerae [TaxI	98.35
d1ta0a_	181	Carboxy-terminal domain RNA polymerase II polypept	98.01
d2obba1	122	Hypothetical protein BT0820 {Bacteroides thetaiota	97.88
d1q92a_	195	5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo	97.45
d2bdea1	458	Cytosolic IMP-GMP specific 5'-nucleotidase {Legion	97.31
d1qyia_	380	Hypothetical protein MW1667 (SA1546) {Staphylococc	83.31

>d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase Gph
species: Haemophilus somnus [TaxId: 731]

Probab=99.91  E-value=8.1e-25  Score=175.20  Aligned_cols=199  Identities=17%  Similarity=0.201  Sum_probs=135.7

Q ss_pred             CC-ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHH---ccCChhHHHHHHH---HHHHhCCCCHHHHH----
Q 044617            1 MA-DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLR---STLPWNSLMDRMM---KELHSQGKTVEDIA----   64 (265)
Q Consensus         1 M~-~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~~~----   64 (265)
                      |+ +|+|+||+||||+|+...     ..+++.+|.+......+   ....+........   ............+.    
T Consensus         1 M~~~k~iiFD~DGTL~Ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (224)
T d2hsza1           1 MTQFKLIGFDLDGTLVNSLPDLALSINSALKDVNLPQASENLVMTWIGNGADVLSQRAVDWACKQAEKELTEDEFKYFKR   80 (224)
T ss_dssp             CSSCSEEEECSBTTTEECHHHHHHHHHHHHHHTTCCCCCHHHHHHHCSSCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCcccCHHHHHHHHHHHHHHCCCCCCcHHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhHHHHHHHHH
Confidence            76 699999999999998642     45666666543211111   1112221111111   11111122211111    


Q ss_pred             --------HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeecc
Q 044617           65 --------NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYH  136 (265)
Q Consensus        65 --------~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~  136 (265)
                              .......++||+.++|+.|+++|++++++||+....+...++++|+..+|+.+++..              .
T Consensus        81 ~~~~~~~~~~~~~~~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~~~~~~--------------~  146 (224)
T d2hsza1          81 QFGFYYGENLCNISRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSEMLGGQ--------------S  146 (224)
T ss_dssp             HHHHHHHHHTTSSCEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSEEECTT--------------T
T ss_pred             HHHHHHHHhhccccchHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcccccccc--------------c
Confidence                    122456789999999999999999999999999999999999999999999998852              2


Q ss_pred             ccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEE
Q 044617          137 DSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAK  216 (265)
Q Consensus       137 ~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (265)
                      ....||           ||..+..++++++++++++++|||+.+|+.+|+++|...+++. +|+.....+.+  ..++..
T Consensus       147 ~~~~kp-----------~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~-~g~~~~~~l~~--~~~d~~  212 (224)
T d2hsza1         147 LPEIKP-----------HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLT-YGYNYNIPIAQ--SKPDWI  212 (224)
T ss_dssp             SSSCTT-----------SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-SSCSTTCCGGG--GCCSEE
T ss_pred             cccccc-----------cchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEe-CCCCCcchhhh--cCCCEE
Confidence            222345           8899999999999999999999999999999999887655554 44443322221  123455


Q ss_pred             EEeCCCHHHHHHHH
Q 044617          217 VHEWSSAEELKKIL  230 (265)
Q Consensus       217 ~~~~~~~~el~~~l  230 (265)
                      +   +++.||.+++
T Consensus       213 v---~~l~dL~~ii  223 (224)
T d2hsza1         213 F---DDFADILKIT  223 (224)
T ss_dssp             E---SSGGGGGGGT
T ss_pred             E---CCHHHHHHhh
Confidence            6   8899987765

>d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphatase YniC
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=1.2e-24  Score=173.84  Aligned_cols=192  Identities=17%  Similarity=0.160  Sum_probs=129.5

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccCC---hhHHHHHHHHHHHhCCCCHHHHH---------H
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTLP---WNSLMDRMMKELHSQGKTVEDIA---------N   65 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------~   65 (265)
                      +++++||+||||+|+...     ..++++.|.+......+....   .....................+.         .
T Consensus         3 i~a~iFD~DGTL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (218)
T d1te2a_           3 ILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISL   82 (218)
T ss_dssp             CCEEEECCBTTTBCCHHHHHHHHHHHHHHTTCCGGGGGGSCCCTTCCHHHHHHHHHHHSCCSSSCHHHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhCCCccchhhhhhhcccccchhHHHHHHHHHHHHHHh
Confidence            689999999999998542     445666666533222222221   11111111111111111111111         1


Q ss_pred             HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                      .....+++||+.++|++|+++|++++|+||+....+...++.+|+.++|+.+++.+              .....||   
T Consensus        83 ~~~~~~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~i~~~~--------------~~~~~Kp---  145 (218)
T d1te2a_          83 VEETRPLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAE--------------KLPYSKP---  145 (218)
T ss_dssp             HHHHCCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEECT--------------TSSCCTT---
T ss_pred             hhccccccchHHHHHHHhhhcccccccccccccccccccccccccccccccccccc--------------ccccchh---
Confidence            12345678999999999999999999999999999999999999999999999852              1122355   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEE  225 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  225 (265)
                              ++..++.+++++|++|+++++|||+.+|+.+|+++|...+++... .......   ...++..+   +++.|
T Consensus       146 --------~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~~-~~~~~~~---~~~a~~~i---~~l~e  210 (218)
T d1te2a_         146 --------HPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPAP-EAQNDPR---FVLANVKL---SSLTE  210 (218)
T ss_dssp             --------STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TTTTCGG---GGGSSEEC---SCGGG
T ss_pred             --------hHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECCC-CCccchh---hcCCCEEE---CChhh
Confidence                    789999999999999999999999999999999988766655432 2222211   11234445   88877


Q ss_pred             H
Q 044617          226 L  226 (265)
Q Consensus       226 l  226 (265)
                      |
T Consensus       211 l  211 (218)
T d1te2a_         211 L  211 (218)
T ss_dssp             C
T ss_pred             C
Confidence            5

>d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Phosphoglycolate phosphatase
species: Lactobacillus plantarum [TaxId: 1590]

Probab=99.91  E-value=1.2e-25  Score=178.60  Aligned_cols=187  Identities=14%  Similarity=0.094  Sum_probs=129.7

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccC--ChhHHHHHHHHHHHhCCCC---HHH--------
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTL--PWNSLMDRMMKELHSQGKT---VED--------   62 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~--------   62 (265)
                      |++|+|+|||||||+|+...     ..++.++|.+....+.....  ......       ...+..   .+.        
T Consensus         1 M~~k~viFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~   73 (207)
T d2hdoa1           1 MTYQALMFDIDGTLTNSQPAYTTVMREVLATYGKPFSPAQAQKTFPMAAEQAM-------TELGIAASEFDHFQAQYEDV   73 (207)
T ss_dssp             CCCSEEEECSBTTTEECHHHHHHHHHHHHHTTTCCCCHHHHHHHTTSCHHHHH-------HHTTCCGGGHHHHHHHHHHH
T ss_pred             CCCcEEEEeCCCCcCcCHHHHHHHHHHHHHHcCCCCCHHHHHHHhcchhhhhh-------hccccchhhHHHHHHHhhhh
Confidence            88999999999999998542     44555555543222222111  111111       111111   111        


Q ss_pred             HHHHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCC
Q 044617           63 IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSH  142 (265)
Q Consensus        63 ~~~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp  142 (265)
                      +........++||+.++|+.|++ +++++|+||+....+...++++|+..+|+.+++..              .....||
T Consensus        74 ~~~~~~~~~~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f~~i~~~~--------------~~~~~KP  138 (207)
T d2hdoa1          74 MASHYDQIELYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRMAVTISAD--------------DTPKRKP  138 (207)
T ss_dssp             HTTCGGGCEECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGEEEEECGG--------------GSSCCTT
T ss_pred             hcccccccccccchhhhhhhhcc-ccccccccccccccccccccccccccccccccccc--------------ccccchh
Confidence            11223456789999999999986 69999999999999999999999999999988852              2223456


Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                                 +|.+++.+++++|++|+++++|||+.+|+.+|+++|+..+++ .+|+.......    .++..+   ++
T Consensus       139 -----------~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v-~~g~~~~~~~~----~~~~~i---~~  199 (207)
T d2hdoa1         139 -----------DPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLA-VWGMDPNADHQ----KVAHRF---QK  199 (207)
T ss_dssp             -----------SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-GGGCCTTGGGS----CCSEEE---SS
T ss_pred             -----------hhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEE-ecCCCChhHhh----hcCcEe---CC
Confidence                       899999999999999999999999999999999988765544 44444433221    233445   78


Q ss_pred             HHHHHH
Q 044617          223 AEELKK  228 (265)
Q Consensus       223 ~~el~~  228 (265)
                      +.||++
T Consensus       200 l~dll~  205 (207)
T d2hdoa1         200 PLDILE  205 (207)
T ss_dssp             GGGGGG
T ss_pred             HHHHHh
Confidence            888765

>d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein SP2064
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.91  E-value=2.9e-25  Score=175.90  Aligned_cols=185  Identities=15%  Similarity=0.143  Sum_probs=128.3

Q ss_pred             ceEEEEecCCCCCCCCc-----hHHHHHHhCchHHH---HHHHccCChhHHHHHHHHHHHhCCCCHHHHHH--------H
Q 044617            3 DVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHLF---NQLRSTLPWNSLMDRMMKELHSQGKTVEDIAN--------C   66 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~   66 (265)
                      +.+++||+||||+|+..     ...+++++|.+...   ...+...........+.   ...+...+.+..        .
T Consensus         1 ~~a~iFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   77 (204)
T d2go7a1           1 KTAFIWDLDGTLLDSYEAILSGIEETFAQFSIPYDKEKVREFIFKYSVQDLLVRVA---EDRNLDVEVLNQVRAQSLAEK   77 (204)
T ss_dssp             CCEEEECTBTTTEECHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHSCHHHHHHHHH---HHHTCCHHHHHHHHHHHHTTC
T ss_pred             CEEEEEcCCCcCccCHHHHHHHHHHHHHHcCCCCCHHHHHHhhccccccccccccc---chhhhhHHHHHHHHHHHHHhh
Confidence            46899999999999854     24566666764322   22222223332222221   122333332221        1


Q ss_pred             hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           67 LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        67 ~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      .....++||+.++|+.|+++|++++|+||+... +..+++++|+.++|+.+++++              .....||    
T Consensus        78 ~~~~~~~pgv~~~L~~L~~~g~~~~v~Sn~~~~-~~~~l~~~gl~~~f~~i~~s~--------------~~~~~Kp----  138 (204)
T d2go7a1          78 NAQVVLMPGAREVLAWADESGIQQFIYTHKGNN-AFTILKDLGVESYFTEILTSQ--------------SGFVRKP----  138 (204)
T ss_dssp             GGGCEECTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHHTCGGGEEEEECGG--------------GCCCCTT----
T ss_pred             cccCcccchHHhhhhcccccccchhhhcccchh-hhhhhhhcccccccccccccc--------------cccccch----
Confidence            235678999999999999999999999998764 566899999999999999852              1223456    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                             ++.+++.+++++|++|++|++|||+.+|+.+|+++|+..+++..+.+.           .+..+   ++..||
T Consensus       139 -------~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~~~~~~-----------~~~~~---~~~~dl  197 (204)
T d2go7a1         139 -------SPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFLESTYE-----------GNHRI---QALADI  197 (204)
T ss_dssp             -------SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESSCCSCT-----------TEEEC---SSTTHH
T ss_pred             -------hHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEcCCCCC-----------cCeec---CCHHHH
Confidence                   899999999999999999999999999999999988776666544211           12333   777777


Q ss_pred             HHHH
Q 044617          227 KKIL  230 (265)
Q Consensus       227 ~~~l  230 (265)
                      .+++
T Consensus       198 ~~l~  201 (204)
T d2go7a1         198 SRIF  201 (204)
T ss_dssp             HHHT
T ss_pred             HHHh
Confidence            7654

>d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: MtnX-like
domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=3.5e-24  Score=172.19  Aligned_cols=209  Identities=15%  Similarity=0.132  Sum_probs=139.8

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHH---HHHHHcc-CChhHHHHHHHHHHHhC-CCCHHHHH-HHhcCCCCChhH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHL---FNQLRST-LPWNSLMDRMMKELHSQ-GKTVEDIA-NCLRQCPLDSHV   76 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~g~   76 (265)
                      +.+|+|||||||++++....+++.++.+..   ...+... ..+.......   .... +...+.+. ......+++||+
T Consensus         4 k~lVifD~DGTL~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~pg~   80 (226)
T d2feaa1           4 KPFIICDFDGTITMNDNIINIMKTFAPPEWMALKDGVLSKTLSIKEGVGRM---FGLLPSSLKEEITSFVLEDAKIREGF   80 (226)
T ss_dssp             CEEEEECCTTTTBSSCHHHHHHHHHSCTHHHHHHHHHHTTSSCHHHHHHHH---HTTSBGGGHHHHHHHHHHHCCBCTTH
T ss_pred             CeEEEEeCCCCCcCchHHHHHHHHHCcchHHHHHHHHHcCcccHHHHHHHH---HHHhccccHHHHHHHHHhccchhHHH
Confidence            578999999999999988888888876532   2222222 2222222221   1111 11222222 333567899999


Q ss_pred             HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHH
Q 044617           77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGF  156 (265)
Q Consensus        77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~  156 (265)
                      .++++.|+++|++++++|++....++.+++++|+.++   ++++...+++++.....+...    +.     ..+..|+.
T Consensus        81 ~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~---~~an~~~~~~~~~~~~~~~~~----~~-----~~~~~k~~  148 (226)
T d2feaa1          81 REFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDR---IYCNHASFDNDYIHIDWPHSC----KG-----TCSNQCGC  148 (226)
T ss_dssp             HHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGG---EEEEEEECSSSBCEEECTTCC----CT-----TCCSCCSS
T ss_pred             HHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccc---eeeeeEEEeCCcceecccccc----cc-----ccccCCHH
Confidence            9999999999999999999999999999999988544   556555555443322212111    00     11234788


Q ss_pred             HHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHHH
Q 044617          157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIG  235 (265)
Q Consensus       157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~  235 (265)
                      .+..+++++++++++++|||||.+|+.||+   .+++.|+..+.  .+...+..    ..+..|++|.||...|+++.+
T Consensus       149 ~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~---~A~~~~a~~~~--~~~~~~~~----~~~~~~~d~~~i~~~l~~~~~  218 (226)
T d2feaa1         149 CKPSVIHELSEPNQYIIMIGDSVTDVEAAK---LSDLCFARDYL--LNECREQN----LNHLPYQDFYEIRKEIENVKE  218 (226)
T ss_dssp             CHHHHHHHHCCTTCEEEEEECCGGGHHHHH---TCSEEEECHHH--HHHHHHTT----CCEECCSSHHHHHHHHHTSHH
T ss_pred             HHHHHHHHhcCCCceEEEEeCchhhHHHHH---HCCEEEEecch--HHHHHHcC----CCeeecCCHHHHHHHHHHHHH
Confidence            889999999999999999999999999995   46678876431  12222221    123456999999999887754

>d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: predicted phosphatase SP0104
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.90  E-value=5e-24  Score=169.30  Aligned_cols=194  Identities=14%  Similarity=0.157  Sum_probs=132.4

Q ss_pred             CC-ceEEEEecCCCCCCCCc-----hHHHHHHhCchHHHHHHHccC---ChhHHHHHHHHHHHhCCCC------HHHH-H
Q 044617            1 MA-DVVVVFDFDRTLIDDDS-----DNWVVTQMGLTHLFNQLRSTL---PWNSLMDRMMKELHSQGKT------VEDI-A   64 (265)
Q Consensus         1 M~-~k~iifD~DGTL~ds~~-----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~------~~~~-~   64 (265)
                      |. +|+|+||+||||+|+..     ...+++++|.+....+.+...   .+.......   +......      ...+ .
T Consensus         1 M~~ik~VifD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~   77 (210)
T d2ah5a1           1 MTSITAIFFDLDGTLVDSSIGIHNAFTYTFKELGVPSPDAKTIRGFMGPPLESSFATC---LSKDQISEAVQIYRSYYKA   77 (210)
T ss_dssp             CTTCCEEEECSBTTTEECHHHHHHHHHHHHHHHTCCCCCHHHHHHTSSSCHHHHHHTT---SCGGGHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCccccCHHHHHHHHHHHHHHCCCCCCCHHHHHHhhhcchhhhcccc---ccchhhHHHHHHHHHHHHh
Confidence            65 89999999999999854     245566666653212221111   111111000   0000000      0011 1


Q ss_pred             HHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCc
Q 044617           65 NCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHG  144 (265)
Q Consensus        65 ~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~  144 (265)
                      .......+++++.++|+.++.+ ++++|+||+....++..++.+|+..+|+.+++...                ..+|  
T Consensus        78 ~~~~~~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~gl~~~fd~v~~~~~----------------~~~~--  138 (210)
T d2ah5a1          78 KGIYEAQLFPQIIDLLEELSSS-YPLYITTTKDTSTAQDMAKNLEIHHFFDGIYGSSP----------------EAPH--  138 (210)
T ss_dssp             TGGGSCEECTTHHHHHHHHHTT-SCEEEEEEEEHHHHHHHHHHTTCGGGCSEEEEECS----------------SCCS--
T ss_pred             hhhhcccchhHHHHHHhhhhcc-cchhhcccccchhhhHHHHhhcccccccccccccc----------------cccc--
Confidence            2224567899999999999986 59999999999999999999999999999887410                1233  


Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                               ||..+..+++++|++|+++++|||+.+|+.+|+++|...+++. +|+.....+.+  ..++..+   +++.
T Consensus       139 ---------~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i~v~-~g~~~~~~l~~--~~pd~vi---~~l~  203 (210)
T d2ah5a1         139 ---------KADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAIT-WGFGEQADLLN--YQPDYIA---HKPL  203 (210)
T ss_dssp             ---------HHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES-SSSSCHHHHHT--TCCSEEE---SSTT
T ss_pred             ---------cccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEEEEc-CCCCCHHHHHh--CCCCEEE---CCHH
Confidence                     8999999999999999999999999999999999888766664 44443333332  1245666   8999


Q ss_pred             HHHHHHH
Q 044617          225 ELKKILL  231 (265)
Q Consensus       225 el~~~l~  231 (265)
                      ||.++|+
T Consensus       204 el~~~le  210 (210)
T d2ah5a1         204 EVLAYFQ  210 (210)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHhC
Confidence            9988763

>d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Phosphonoacetaldehyde hydrolase
species: Bacillus cereus [TaxId: 1396]

Probab=99.89  E-value=4.1e-23  Score=169.13  Aligned_cols=135  Identities=13%  Similarity=0.077  Sum_probs=104.4

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCccccc-ceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCF-SEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f-~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++|+.|+++|++++|+||+....+...++.+|+..+| +.+++.              ......||     
T Consensus        97 ~~~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~d~~~~~--------------d~~~~~KP-----  157 (257)
T d1swva_          97 YASPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPDFLVTP--------------DDVPAGRP-----  157 (257)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCSCCBCG--------------GGSSCCTT-----
T ss_pred             cCccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccccccccc--------------cccccccc-----
Confidence            4578999999999999999999999999999999999999998887 455553              12223456     


Q ss_pred             cCCCCchHHHHHHHHHhcCCC-CceEEEEcCCCCCcccccCCCCCCeeeecCCCch----h------------------h
Q 044617          148 CPSNLCKGFVLDHVCTSFGCG-KQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPL----W------------------D  204 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~-~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~----~------------------~  204 (265)
                            .|.++..+++++|+. +++|+||||+.+|+.+|+++|+..+++..+....    .                  .
T Consensus       158 ------~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~~ti~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (257)
T d1swva_         158 ------YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILGSSELGLTEEEVENMDSVELREKIEVVRN  231 (257)
T ss_dssp             ------SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTTCTTTCCCHHHHHHSCHHHHHHHHHHHHH
T ss_pred             ------ChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCCEEEEEccCCCCCCCCHHHHhhCCHHHHHHHHHHHHH
Confidence                  789999999999985 5999999999999999999888766666543210    0                  0


Q ss_pred             hhhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          205 RICSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      .+..  ..++..+   +++.||..+|+++
T Consensus       232 ~l~~--~gad~vi---~~l~eL~~ii~~~  255 (257)
T d1swva_         232 RFVE--NGAHFTI---ETMQELESVMEHI  255 (257)
T ss_dssp             HHHH--TTCSEEE---SSGGGHHHHHHHH
T ss_pred             HHHh--CCCCEEE---CCHHHHHHHHHHH
Confidence            0110  1145666   8999999988775

>d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein CT1708
species: Chlorobium tepidum [TaxId: 1097]

Probab=99.89  E-value=2.1e-23  Score=167.92  Aligned_cols=135  Identities=10%  Similarity=0.045  Sum_probs=104.2

Q ss_pred             CCCCChhHHHHHHHHHHcC-CcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLG-CDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g-~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++|+.|+++| ++++|+||+....+...++.+|+.++|+.+++.+.              ...+||     
T Consensus        89 ~~~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~i~~~~~--------------~~~~k~-----  149 (228)
T d2hcfa1          89 DITLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPFGAFADD--------------ALDRNE-----  149 (228)
T ss_dssp             GEEECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSCEECTTT--------------CSSGGG-----
T ss_pred             CceecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccccccccc--------------cccccc-----
Confidence            3467899999999999997 89999999999999999999999999998887521              112233     


Q ss_pred             cCCCCchHHHHHHHHHhc---CCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          148 CPSNLCKGFVLDHVCTSF---GCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~---gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                            +|..+...+..+   +++|++++||||+.+|+.+|+++|+..+++..+.++...+.+.   .++..+   +++.
T Consensus       150 ------~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g~~~~~~l~~~---~ad~vi---~~~~  217 (228)
T d2hcfa1         150 ------LPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATGNFTMEELARH---KPGTLF---KNFA  217 (228)
T ss_dssp             ------HHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCSSSCHHHHHTT---CCSEEE---SCSC
T ss_pred             ------hhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCCCCCHHHHhhC---CCCEEE---CCHH
Confidence                  666655555554   7899999999999999999999888766665554554443332   345666   8888


Q ss_pred             HHHHHHHHHH
Q 044617          225 ELKKILLHLI  234 (265)
Q Consensus       225 el~~~l~~~~  234 (265)
                      ||.++|..++
T Consensus       218 el~~~l~~l~  227 (228)
T d2hcfa1         218 ETDEVLASIL  227 (228)
T ss_dssp             CHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            8888888764

>d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: Hypothetical protein PH0459
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.89  E-value=3.5e-23  Score=166.87  Aligned_cols=131  Identities=18%  Similarity=0.235  Sum_probs=106.6

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|++|++ |++++++||+....+...++.+|+.++|+.++++              ......||      
T Consensus        98 ~~~~~p~~~~~L~~l~~-~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~i~~s--------------~~~~~~KP------  156 (230)
T d1x42a1          98 YGELYPEVVEVLKSLKG-KYHVGMITDSDTEYLMAHLDALGIKDLFDSITTS--------------EEAGFFKP------  156 (230)
T ss_dssp             HCCBCTTHHHHHHHHBT-TBEEEEEESSCHHHHHHHHHHHTCGGGCSEEEEH--------------HHHTBCTT------
T ss_pred             hCcccccHHHHHHHhhc-cCceeeeeccccccchhhhccccccccccccccc--------------ccccccch------
Confidence            46789999999999975 7999999999999999999999999999999985              22223456      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCC-CCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDG-RGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~-~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                           ++..++.+++++|++|+++++|||+ .+|+.+|+++|...+++.+.+... . ...   .++..+   .++.||.
T Consensus       157 -----~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~~~~~~~-~-~~~---~~d~~i---~~l~el~  223 (230)
T d1x42a1         157 -----HPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRKGEKR-E-FWD---KCDFIV---SDLREVI  223 (230)
T ss_dssp             -----SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECTTSCCG-G-GGG---GSSEEE---SSTTHHH
T ss_pred             -----hhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEECCCCCCc-c-ccc---CCCEEE---CCHHHHH
Confidence                 7899999999999999999999998 589999999888777665543322 2 111   234556   9999999


Q ss_pred             HHHHHH
Q 044617          228 KILLHL  233 (265)
Q Consensus       228 ~~l~~~  233 (265)
                      ++|+++
T Consensus       224 ~~l~~l  229 (230)
T d1x42a1         224 KIVDEL  229 (230)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            999875

>d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=1.4e-22  Score=162.30  Aligned_cols=201  Identities=13%  Similarity=0.165  Sum_probs=132.7

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHcc-----CChhHHHHHHHHHHHhCCCCHHHHHHHh-cCCCCChhH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRST-----LPWNSLMDRMMKELHSQGKTVEDIANCL-RQCPLDSHV   76 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~   76 (265)
                      .++|+|||||||+++++...++...|.......+...     ..+..........+  .+...+.+.... ....++||+
T Consensus        10 ~~aV~FD~DGTLi~~e~~~~l~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~pg~   87 (217)
T d1nnla_          10 ADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALI--QPSREQVQRLIAEQPPHLTPGI   87 (217)
T ss_dssp             CSEEEEETBTTTBSSCHHHHHHHHTTCTTTC------------CHHHHHHHHHHHH--CCCHHHHHHHHHHSCCCBCTTH
T ss_pred             CCEEEEcCccccCCccHHHHHHHHcCChHHHHHHHHHHHcCCCCHHHHHHHHHHhc--ccchHHHHHHHHhhccccCHHH
Confidence            4789999999999999888888888776533322221     12333322222211  233223333333 346789999


Q ss_pred             HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHH
Q 044617           77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGF  156 (265)
Q Consensus        77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~  156 (265)
                      .+++++|+++|++++|+|++....++++++.+|+..+  .+++++..++.+|..+......    |     +..+..|..
T Consensus        88 ~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~--~v~an~~~~~~~G~~~g~~~~~----p-----~~~~~~K~~  156 (217)
T d1nnla_          88 RELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT--NVFANRLKFYFNGEYAGFDETQ----P-----TAESGGKGK  156 (217)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG--GEEEECEEECTTSCEEEECTTS----G-----GGSTTHHHH
T ss_pred             HHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCccc--ceeeeeeeeeehhccccceeee----e-----eeccchHHH
Confidence            9999999999999999999999999999999999754  6888887777777766422211    1     122345889


Q ss_pred             HHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                      .++.+.++.  +++++++||||.||+.|++.   +++.++.++.......++   .++..+   .+|.||+
T Consensus       157 ~v~~~~~~~--~~~~~~~vGDs~~Di~~~~~---ag~~va~~~~~~~~~~~~---~ad~~i---~~f~ell  216 (217)
T d1nnla_         157 VIKLLKEKF--HFKKIIMIGDGATDMEACPP---ADAFIGFGGNVIRQQVKD---NAKWYI---TDFVELL  216 (217)
T ss_dssp             HHHHHHHHH--CCSCEEEEESSHHHHTTTTT---SSEEEEECSSCCCHHHHH---HCSEEE---SCGGGGC
T ss_pred             HHHHHHhcc--CccccEEEEeCHhhHHHHHh---CCceEEECCCHHHHHHHH---hCCCEe---CCHHHhc
Confidence            999887765  46899999999999999955   455555443333233332   234555   7777763

>d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: N-acylneuraminate-9-phosphatase NANP
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.88  E-value=4.4e-22  Score=161.78  Aligned_cols=140  Identities=16%  Similarity=0.134  Sum_probs=111.5

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ....++||+.++|+.|++ +++++++||+....+...++.+|+..+|+.+++.              ......||     
T Consensus       106 ~~~~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~s--------------~~~~~~KP-----  165 (247)
T d2gfha1         106 QHMILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFDAIVIG--------------GEQKEEKP-----  165 (247)
T ss_dssp             HTCCCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCSEEEEG--------------GGSSSCTT-----
T ss_pred             ccCccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhccccccccccccc--------------cccccchh-----
Confidence            467889999999999985 7999999999999999999999999999998875              22233466     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                            .+.+++.+++++|++|+++++|||+. +|+.+|+++|...+++...+.....   .....++..+   .++.||
T Consensus       166 ------~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~~~~~~~~~~~~~~---~~~~~p~~~i---~~l~eL  233 (247)
T d2gfha1         166 ------APSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKSGRVPL---TSSPMPHYMV---SSVLEL  233 (247)
T ss_dssp             ------CHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEECTTCCCCS---SCCCCCSEEE---SSGGGH
T ss_pred             ------hhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCeEEEEECCCCCCcc---cccCCCCEEE---CCHHHH
Confidence                  78999999999999999999999996 8999999989876655543222111   1122345566   899999


Q ss_pred             HHHHHHHHHhhcc
Q 044617          227 KKILLHLIGAISI  239 (265)
Q Consensus       227 ~~~l~~~~~~~~~  239 (265)
                      .++|+++=.++++
T Consensus       234 ~~ll~~i~~~~~~  246 (247)
T d2gfha1         234 PALLQSIDCKVSM  246 (247)
T ss_dssp             HHHHHHHTTCCEE
T ss_pred             HHHHHHHhhhccC
Confidence            9999998666554

>d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Xanthobacter autotrophicus [TaxId: 280]

Probab=99.86  E-value=5.2e-21  Score=154.85  Aligned_cols=138  Identities=9%  Similarity=0.069  Sum_probs=108.7

Q ss_pred             HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcc
Q 044617           66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGC  145 (265)
Q Consensus        66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~  145 (265)
                      .+....++|++.+.|++|+  ++.++++||+....+...++..++..+|+.+++.+              .....||   
T Consensus        88 ~~~~~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~fd~v~~s~--------------~~~~~KP---  148 (245)
T d1qq5a_          88 AYNRLTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDAVISVD--------------AKRVFKP---  148 (245)
T ss_dssp             GGGSCCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSEEEEGG--------------GGTCCTT---
T ss_pred             cccccccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhcccccccccccccc--------------cccccCc---
Confidence            3446788999999999886  57899999999999999999999999999998852              2234466   


Q ss_pred             cccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhh-------------------
Q 044617          146 NLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRI-------------------  206 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~-------------------  206 (265)
                              .|.++..+++++|++|+++++|||+.+|+.+|+++|+.++++.+.+.......                   
T Consensus       149 --------~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~~tv~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (245)
T d1qq5a_         149 --------HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVARLSQEALARELVSGTIAPLTMFKALRMRE  220 (245)
T ss_dssp             --------SHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECCSCHHHHHHHTTSSSCCHHHHHHHHHSSC
T ss_pred             --------cHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCCeEEEEcCCCcccccccccccccccchhhhhhhhhh
Confidence                    78999999999999999999999999999999999998888876542211100                   


Q ss_pred             hcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          207 CSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      ......++..+   +++.||.++++.+
T Consensus       221 ~~~~~~pd~~i---~~l~el~~lv~~~  244 (245)
T d1qq5a_         221 ETYAEAPDFVV---PALGDLPRLVRGM  244 (245)
T ss_dssp             CTTSCCCSEEE---SSGGGHHHHHHHH
T ss_pred             hhccCCCCEEE---CCHHHHHHHHHhh
Confidence            00112356667   8999999988764

>d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphonoacetaldehyde hydrolase-like
domain: Putative hydrolase SP0805
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=99.86  E-value=3.5e-22  Score=156.06  Aligned_cols=164  Identities=15%  Similarity=0.127  Sum_probs=112.3

Q ss_pred             CCceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHccC--ChhHHHHHHHHHHHhC-CCCHHH----HHHHhc
Q 044617            1 MADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRSTL--PWNSLMDRMMKELHSQ-GKTVED----IANCLR   68 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~   68 (265)
                      |++|+|+||+||||+|+...     ..++...|.+..........  ......    ...... ....+.    ......
T Consensus         1 M~~k~viFD~DGTL~dt~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~   76 (187)
T d2fi1a1           1 MKYHDYIWDLGGTLLDNYETSTAAFVETLALYGITQDHDSVYQALKVSTPFAI----ETFAPNLENFLEKYKENEARELE   76 (187)
T ss_dssp             CCCSEEEECTBTTTBCHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHCHHHHH----HHHCTTCTTHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCCcccCHHHHHHHHHHHHHHcCCCccHHHHHhhhhccchhhh----hhhhHHHHHHHHHHHHHHHHHhh
Confidence            88999999999999997542     34455556543222221110  111111    111110 111111    223345


Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|+.|+++|++++|+||+..... ..++++++..+|+.+++.+              .....||      
T Consensus        77 ~~~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~~-~~l~~~~l~~~fd~i~~~~--------------~~~~~KP------  135 (187)
T d2fi1a1          77 HPILFEGVSDLLEDISNQGGRHFLVSHRNDQVL-EILEKTSIAAYFTEVVTSS--------------SGFKRKP------  135 (187)
T ss_dssp             SCCBCTTHHHHHHHHHHTTCEEEEECSSCTHHH-HHHHHTTCGGGEEEEECGG--------------GCCCCTT------
T ss_pred             cCcccchhHHHHHHHHhhhccccccccCccchh-hhhhhhccccccccccccc--------------cccccCC------
Confidence            678899999999999999999999999877655 5789999999999988852              1223456      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                           +|..++.+++++++  +++++|||+.+|+.+|+++|...+.+.
T Consensus       136 -----~p~~~~~~~~~~~~--~~~l~vgDs~~Di~aA~~aG~~~i~v~  176 (187)
T d2fi1a1         136 -----NPESMLYLREKYQI--SSGLVIGDRPIDIEAGQAAGLDTHLFT  176 (187)
T ss_dssp             -----SCHHHHHHHHHTTC--SSEEEEESSHHHHHHHHHTTCEEEECS
T ss_pred             -----CHHHHHHHHHHcCC--CCeEEEeCCHHHHHHHHHcCCEEEEEC
Confidence                 78999999999986  459999999999999998777655554

>d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: HAD-related
domain: L-2-Haloacid dehalogenase, HAD
species: Pseudomonas sp., strain YL [TaxId: 306]

Probab=99.86  E-value=2e-21  Score=154.89  Aligned_cols=130  Identities=13%  Similarity=0.134  Sum_probs=108.5

Q ss_pred             cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           68 RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        68 ~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ....+++++.++++.+++++++++++||+........++..++..+|+.++++              ......||     
T Consensus        90 ~~~~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~~~~s--------------~~~~~~KP-----  150 (220)
T d1zrna_          90 LRLAPFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDHLLSV--------------DPVQVYKP-----  150 (220)
T ss_dssp             GGCEECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSEEEES--------------GGGTCCTT-----
T ss_pred             ccccccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccceeee--------------eeeecccc-----
Confidence            45678999999999999999999999999999999999999999999999885              22233456     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHH
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELK  227 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~  227 (265)
                            .|..++.+++++|++|++++||||+..|+.+|+++|+.++++.+.+.....+    ...++..+   +++.||.
T Consensus       151 ------~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r~~~~~~~~----~~~~d~~i---~~l~el~  217 (220)
T d1zrna_         151 ------DNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINRTGNVFEEM----GQTPDWEV---TSLRAVV  217 (220)
T ss_dssp             ------SHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECTTCCCCCSS----SCCCSEEE---SSHHHHH
T ss_pred             ------HHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcCCCCCcccc----cCCCCEEE---CCHHHHH
Confidence                  7899999999999999999999999999999999999888887665443331    22345666   8999987


Q ss_pred             HH
Q 044617          228 KI  229 (265)
Q Consensus       228 ~~  229 (265)
                      ++
T Consensus       218 ~l  219 (220)
T d1zrna_         218 EL  219 (220)
T ss_dssp             TT
T ss_pred             hh
Confidence            64

>d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: beta-Phosphoglucomutase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.85  E-value=3.5e-22  Score=159.70  Aligned_cols=168  Identities=13%  Similarity=0.163  Sum_probs=115.3

Q ss_pred             CceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHHHcc---CChhHHHHHHHHHHHhCCCCHHHH----------
Q 044617            2 ADVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQLRST---LPWNSLMDRMMKELHSQGKTVEDI----------   63 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----------   63 (265)
                      |+|+|+||+||||+|+...     ..++..+|.+.....+...   .........+.... ....+.+.+          
T Consensus         1 MikaiiFD~DGTL~ds~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   79 (221)
T d1o08a_           1 MFKAVLFDLDGVITDTAEYHFRAWKALAEEIGINGVDRQFNEQLKGVSREDSLQKILDLA-DKKVSAEEFKELAKRKNDN   79 (221)
T ss_dssp             CCCEEEECCBTTTBTHHHHHHHHHHHHHHHTTCCCCCHHHHTTTTTCCHHHHHHHHHTTS-SSCCCHHHHHHHHHHHHHH
T ss_pred             CCcEEEEcCCCCeEcCHHHHHHHHHHHHHHcCCCCChHHHHHHHhhccchhhhhhccccc-cccchhhhhhhHHHHHHhh
Confidence            4799999999999997442     3455555654322222221   12222111111100 011122111          


Q ss_pred             -HHHh---cCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617           64 -ANCL---RQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        64 -~~~~---~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                       .+..   ....++||+.++|+.|+++|++++++||+.  .....++.+|+..+|+.+++..              ....
T Consensus        80 ~~~~~~~~~~~~~~~g~~~~l~~l~~~~~~i~i~s~~~--~~~~~l~~~~l~~~f~~i~~~~--------------~~~~  143 (221)
T d1o08a_          80 YVKMIQDVSPADVYPGILQLLKDLRSNKIKIALASASK--NGPFLLERMNLTGYFDAIADPA--------------EVAA  143 (221)
T ss_dssp             HHHHTTTCCGGGBCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHTTCGGGCSEECCTT--------------TSSS
T ss_pred             ccccccccccccccCCceeccccccccccceEEEeecc--hhhHHHHhhccccccccccccc--------------cccc
Confidence             1111   234689999999999999999999999974  4678889999999999988752              2223


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      .||           ++..++.+++++|++|++|++|||+.+|+.+|+++|+.++++..
T Consensus       144 ~KP-----------~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~  190 (221)
T d1o08a_         144 SKP-----------APDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGR  190 (221)
T ss_dssp             CTT-----------STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESC
T ss_pred             ccc-----------ChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEECC
Confidence            466           78999999999999999999999999999999998887766653

>d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: beta-Phosphoglucomutase-like
domain: Hypothetical protein Atu0790
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=99.84  E-value=1.4e-21  Score=156.20  Aligned_cols=200  Identities=14%  Similarity=0.179  Sum_probs=134.9

Q ss_pred             ceEEEEecCCCCCCCCch-----HHHHHHhCchHHHHHH---HccCChhHHHHHHHHHHHhCCCCHHH---HH-----HH
Q 044617            3 DVVVVFDFDRTLIDDDSD-----NWVVTQMGLTHLFNQL---RSTLPWNSLMDRMMKELHSQGKTVED---IA-----NC   66 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~   66 (265)
                      +|+|+|||||||+||...     ..++++.|++....+.   +....+......+...... ....+.   +.     ..
T Consensus         2 ~kaviFD~DGtL~dt~~~~~~a~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~   80 (222)
T d2fdra1           2 FDLIIFDCDGVLVDSEIIAAQVESRLLTEAGYPISVEEMGERFAGMTWKNILLQVESEASI-PLSASLLDKSEKLLDMRL   80 (222)
T ss_dssp             CSEEEECSBTTTBCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCCHHHHHHHHHHHHCC-CCCTHHHHHHHHHHHHHH
T ss_pred             ceEEEECCCCcccCCHHHHHHHHHHHHHHcCCCCCHHHHHHHHhhhccccccccccccccc-cccccchhHHHHHHHHHh
Confidence            589999999999998553     4566677765322222   2233444444443333211 111111   11     12


Q ss_pred             hcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccc
Q 044617           67 LRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCN  146 (265)
Q Consensus        67 ~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~  146 (265)
                      .....++||+.++|+.|+.   +.+++|+.....+...++.+++..+|+.++....           .......||    
T Consensus        81 ~~~~~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~~~~~~~-----------~~~~~~~KP----  142 (222)
T d2fdra1          81 ERDVKIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPHIYSAK-----------DLGADRVKP----  142 (222)
T ss_dssp             HHHCCBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTCEEEHH-----------HHCTTCCTT----
T ss_pred             hhccchhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccceeecccc-----------ccccccccc----
Confidence            2357889999999987764   5789999999999999999999999987554210           111223455    


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCch---hhhhhcCCCeeeEEEEeCCCH
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPL---WDRICSNPMLIKAKVHEWSSA  223 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  223 (265)
                             ++..+.++++++|++|+++++|||+..|+.+|+++|+..+++.......   ...+.+.  .++..+   +++
T Consensus       143 -------~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v~~~~~~~~~~~~~l~~~--~ad~vi---~~l  210 (222)
T d2fdra1         143 -------KPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFTGASHTYPSHADRLTDA--GAETVI---SRM  210 (222)
T ss_dssp             -------SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEECCSTTCCTTHHHHHHHH--TCSEEE---SCG
T ss_pred             -------CHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEEccCCCCCcchHHHHHhC--CCCEEE---CCH
Confidence                   7899999999999999999999999999999999888777775442211   1112211  235666   999


Q ss_pred             HHHHHHHHHH
Q 044617          224 EELKKILLHL  233 (265)
Q Consensus       224 ~el~~~l~~~  233 (265)
                      .||.++|..+
T Consensus       211 ~eL~~ll~~l  220 (222)
T d2fdra1         211 QDLPAVIAAM  220 (222)
T ss_dssp             GGHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999988876

>d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Phosphoserine phosphatase
domain: Phosphoserine phosphatase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.82  E-value=4.4e-20  Score=145.45  Aligned_cols=202  Identities=16%  Similarity=0.224  Sum_probs=135.5

Q ss_pred             CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHcc---C--ChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhH
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRST---L--PWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHV   76 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   76 (265)
                      ++|+|+|||||||+|+++...+++..|.......+...   .  .+......  ......+..............+++++
T Consensus         3 kkKlv~FDlDGTL~d~es~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (210)
T d1j97a_           3 KKKLILFDFDSTLVNNETIDEIAREAGVEEEVKKITKEAMEGKLNFEQSLRK--RVSLLKDLPIEKVEKAIKRITPTEGA   80 (210)
T ss_dssp             CCCEEEECCCCCCBSSCHHHHHHHHTTCHHHHHHHHHHHHTTSSCHHHHHHH--HHHTTTTCBHHHHHHHHHTCCBCTTH
T ss_pred             CCeEEEEeCCCCcCCchHHHHHHHHcCCcHHHHHHHHHHhcccchhHHHHHH--HHHHHhhhHHHHHHHHhhhhhhhhhH
Confidence            57999999999999999988888888887654333211   1  11111111  11112344455555566678899999


Q ss_pred             HHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHH
Q 044617           77 AAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGF  156 (265)
Q Consensus        77 ~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~  156 (265)
                      .+.++.++.+|..++++|++....+....+..+...++...+..    + .+.......          ..+..+..|+.
T Consensus        81 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~----------~~~~~~~~~~~  145 (210)
T d1j97a_          81 EETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIV----K-DGKLTGDVE----------GEVLKENAKGE  145 (210)
T ss_dssp             HHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEEEEEE----E-TTEEEEEEE----------CSSCSTTHHHH
T ss_pred             HHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhhhhcc----c-ccccccccc----------ccccccccccc
Confidence            99999999999999999999999999999988877665544432    2 122111100          11133455899


Q ss_pred             HHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHH
Q 044617          157 VLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKIL  230 (265)
Q Consensus       157 ~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l  230 (265)
                      .+..+++.+++.++++++||||.||+.|++.   +++.++-.+   .+.+++.   ++..+ ...|+.+|+++|
T Consensus       146 ~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~---ag~~va~na---~~~lk~~---Ad~vi-~~~d~~~vl~~l  209 (210)
T d1j97a_         146 ILEKIAKIEGINLEDTVAVGDGANDISMFKK---AGLKIAFCA---KPILKEK---ADICI-EKRDLREILKYI  209 (210)
T ss_dssp             HHHHHHHHHTCCGGGEEEEESSGGGHHHHHH---CSEEEEESC---CHHHHTT---CSEEE-CSSCGGGGGGGC
T ss_pred             hhhhHHHHhcccccceEEecCCcChHHHHHH---CCCCEEECC---CHHHHHh---CCEEE-cCCCHHHHHHHh
Confidence            9999999999999999999999999999965   444454322   2234332   33444 334667776654

>d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Magnesium-dependent phosphatase-1, Mdp1
domain: Magnesium-dependent phosphatase-1, Mdp1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=1.9e-20  Score=143.10  Aligned_cols=101  Identities=14%  Similarity=0.140  Sum_probs=84.6

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCH-HHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQ-FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNL  147 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~-~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~  147 (265)
                      ...++||+.++|+.|+++|++++|+||+.. ......++.+++..+|..+.+.                   .||     
T Consensus        44 ~~~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~~~~~~~-------------------~kp-----   99 (164)
T d1u7pa_          44 NIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIY-------------------PGS-----   99 (164)
T ss_dssp             EECCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGCSEEEES-------------------SSC-----
T ss_pred             ccccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccceeeecc-------------------cCC-----
Confidence            468899999999999999999999998765 5567778899998887766552                   134     


Q ss_pred             cCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCC
Q 044617          148 CPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNY  200 (265)
Q Consensus       148 ~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~  200 (265)
                            |+..+..+++++|++|++++||||+..|+.+|+++|...+.+ .+|+
T Consensus       100 ------~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~~~i~v-~~G~  145 (164)
T d1u7pa_         100 ------KVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHI-RDGM  145 (164)
T ss_dssp             ------HHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEEEEC-SSCC
T ss_pred             ------ChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCCEEEEE-CCCC
Confidence                  899999999999999999999999999999999977755544 4554

>d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: E-1 enzyme
species: Human(Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=2.2e-20  Score=151.00  Aligned_cols=108  Identities=13%  Similarity=0.128  Sum_probs=91.1

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ...++||+.++|..|+++|++++|+||+........++..|+..+|+.....   ++          .....||      
T Consensus       125 ~~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~~---~d----------~~~~~KP------  185 (253)
T d1zs9a1         125 KAEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELVDGH---FD----------TKIGHKV------  185 (253)
T ss_dssp             CBCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGCSEE---EC----------GGGCCTT------
T ss_pred             ccccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhccee---ec----------cccccCC------
Confidence            4578999999999999999999999999999999999999988877653331   11          1112466      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNY  200 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~  200 (265)
                           ++.+++.+++++|++|++++||||+.+|+.+|+++|+.++++.+.|.
T Consensus       186 -----~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~r~g~  232 (253)
T d1zs9a1         186 -----ESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVVRPGN  232 (253)
T ss_dssp             -----CHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEECCTTC
T ss_pred             -----CcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEeCCCC
Confidence                 89999999999999999999999999999999999998888876543

>d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=2.3e-20  Score=145.06  Aligned_cols=143  Identities=13%  Similarity=0.140  Sum_probs=95.4

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCCHH---------------HHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDANQF---------------YIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~---------------~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...++||+.++|+.|+++|++++++||....               ++...+...++.  ++.++.+             
T Consensus        25 ~~~~~~gv~e~l~~L~~~g~~~~ivTNq~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~c-------------   89 (182)
T d2gmwa1          25 NFEFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD--LDGIYYC-------------   89 (182)
T ss_dssp             GCCBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC--CSEEEEE-------------
T ss_pred             HeeECCCHHHHHHHHhhcCchhhhhhccchhhhhhhHHHhhhhhhhhhhhhhhhhccc--ccceeec-------------
Confidence            5678999999999999999999999997531               223333334432  2233222             


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCee
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLI  213 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (265)
                      |+++....+...+.|.....+|.++..+++++++++++++||||+.+|+++|+++|.........|+........   .+
T Consensus        90 p~~p~~~~~~~~~~~~~rKP~p~m~~~~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~---~a  166 (182)
T d2gmwa1          90 PHHPQGSVEEFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAEN---AA  166 (182)
T ss_dssp             CCBTTCSSGGGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHH---HC
T ss_pred             ccccccccccccccccccCCccccccchhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCccccc---CC
Confidence            111110000001112222338899999999999999999999999999999999888765666666655443332   23


Q ss_pred             eEEEEeCCCHHHHHHHHHH
Q 044617          214 KAKVHEWSSAEELKKILLH  232 (265)
Q Consensus       214 ~~~~~~~~~~~el~~~l~~  232 (265)
                      +..+   +++.||.++|++
T Consensus       167 d~v~---~~l~dl~~~ikk  182 (182)
T d2gmwa1         167 DWVL---NSLADLPQAIKK  182 (182)
T ss_dssp             SEEE---SCGGGHHHHHHC
T ss_pred             CEEE---CCHHHHHHHhcC
Confidence            4556   999999998863

>d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.6e-20  Score=149.77  Aligned_cols=109  Identities=8%  Similarity=0.077  Sum_probs=90.4

Q ss_pred             HhcCCCCChhHHHHHHHHHHcCCcEEEEeCCC----HHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccC
Q 044617           66 CLRQCPLDSHVAAAIKSAHSLGCDLKIVSDAN----QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLS  141 (265)
Q Consensus        66 ~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~----~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~k  141 (265)
                      ......++|++.++|.+|+++|++++++||+.    .......+...++..+|+.+++++              .....|
T Consensus        92 ~~~~~~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~fd~i~~s~--------------~~~~~K  157 (222)
T d1cr6a1          92 AMAARSINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHFDFLIESC--------------QVGMIK  157 (222)
T ss_dssp             HHHTCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGCSEEEEHH--------------HHSCCT
T ss_pred             HHhcCCCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhhceeeehh--------------hccCCC
Confidence            34567889999999999999999999999853    335566667889999999999852              222346


Q ss_pred             CCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617          142 HHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN  199 (265)
Q Consensus       142 p~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~  199 (265)
                      |           ++.+++.++++++++|++++||||+.+|+.+|+++|+.++.+..+.
T Consensus       158 P-----------~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~~~~  204 (222)
T d1cr6a1         158 P-----------EPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVHNTA  204 (222)
T ss_dssp             T-----------CHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECCSSS
T ss_pred             C-----------ChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEECCcc
Confidence            6           8999999999999999999999999999999999888877776543

>d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Homoserine kinase ThrH
domain: Homoserine kinase ThrH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.78  E-value=5.5e-18  Score=132.88  Aligned_cols=198  Identities=16%  Similarity=0.157  Sum_probs=133.3

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKS   82 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~   82 (265)
                      +|+|+|||||||+++ ....++...|.............+..++..-...+...+.....+..........++....+..
T Consensus         2 mkli~fDlDGTLl~e-~~~~~a~~~Gi~~~~~tgR~~~~~~~~~~~~v~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (206)
T d1rkua_           2 MEIACLDLEGVLVPE-IWIAFAEKTGIDALKATTRDIPDYDVLMKQRLRILDEHGLKLGDIQEVIATLKPLEGAVEFVDW   80 (206)
T ss_dssp             CEEEEEESBTTTBCC-HHHHHHHHHTCGGGGCCTTTCCCHHHHHHHHHHHHHHTTCCHHHHHHHHTTCCCCTTHHHHHHH
T ss_pred             cEEEEEcCccchHHH-HHHHHHHHcCCHHHHHHCCCCCCHHHHHHHHHHHHHhCCCceehhhhhhhhccccchHHHHHHH
Confidence            489999999999985 4455667777754222111223456665555556666677777777777778889999888888


Q ss_pred             HHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHHHHHH
Q 044617           83 AHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVC  162 (265)
Q Consensus        83 l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~  162 (265)
                      ++ .+++.+++|++...........+++..++...+.    ....+.....                 ...++......+
T Consensus        81 ~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~~~~~-----------------~~~~~~~~~~~~  138 (206)
T d1rkua_          81 LR-ERFQVVILSDTFYEFSQPLMRQLGFPTLLCHKLE----IDDSDRVVGY-----------------QLRQKDPKRQSV  138 (206)
T ss_dssp             HH-TTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEEEE----ECTTSCEEEE-----------------ECCSSSHHHHHH
T ss_pred             hh-cCceEEEeccCchHHHHHHHHHhCCchhhcceee----eecccccccc-----------------cccchhhHHHHH
Confidence            76 5789999999999999999998887644332222    2222221110                 112556667788


Q ss_pred             HhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          163 TSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       163 ~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      +.++++++++++||||.||+.|.+   .++++++- +.+ ....++.+.     +..++|..||.+.|.+.
T Consensus       139 ~~~~i~~~eviaiGDg~NDi~Ml~---~Ag~gIAm-na~-~~v~~~~~~-----~~~~~~~~d~~~~~~~~  199 (206)
T d1rkua_         139 IAFKSLYYRVIAAGDSYNDTTMLS---EAHAGILF-HAP-ENVIREFPQ-----FPAVHTYEDLKREFLKA  199 (206)
T ss_dssp             HHHHHTTCEEEEEECSSTTHHHHH---HSSEEEEE-SCC-HHHHHHCTT-----SCEECSHHHHHHHHHHH
T ss_pred             HHhcccccceEEecCCccCHHHHH---hCCccEEE-CCC-HHHHHhCCC-----ceeecCHHHHHHHHHHH
Confidence            889999999999999999999994   45656665 222 233333322     22238999999887765

>d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Epoxide hydrolase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=4.5e-19  Score=140.75  Aligned_cols=110  Identities=8%  Similarity=0.059  Sum_probs=88.7

Q ss_pred             HHHHhcCCCCChhHHHHHHHHHHcCCcEEEEeCCCHHH----HHHHHHhcCcccccceEEecCceecCCCceEEeecccc
Q 044617           63 IANCLRQCPLDSHVAAAIKSAHSLGCDLKIVSDANQFY----IETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDS  138 (265)
Q Consensus        63 ~~~~~~~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~----i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~  138 (265)
                      +........++|++.++|..|+++|++++++||+....    ........++..+|+.+++.              ....
T Consensus        91 ~~~~~~~~~~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~fd~i~~s--------------~~~~  156 (225)
T d1zd3a1          91 FDKAISARKINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHFDFLIES--------------CQVG  156 (225)
T ss_dssp             HHHHHHHCEECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTSSEEEEH--------------HHHT
T ss_pred             HHHHhhcCCCCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhccEEEec--------------cccc
Confidence            33445567889999999999999999999999875443    33444556788889998885              2233


Q ss_pred             ccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          139 TLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       139 ~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      ..||           ++.+++++++++|++|+++++|||+..|+.+|+++|+.++++..
T Consensus       157 ~~KP-----------~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~~  204 (225)
T d1zd3a1         157 MVKP-----------EPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQD  204 (225)
T ss_dssp             CCTT-----------CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECSS
T ss_pred             cchh-----------HHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEECC
Confidence            4567           89999999999999999999999999999999998887666653

>d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Hypothetical protein Mll2559
species: Mesorhizobium loti [TaxId: 381]

Probab=99.77  E-value=6.6e-19  Score=139.38  Aligned_cols=145  Identities=14%  Similarity=0.127  Sum_probs=92.3

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDAN---------------QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~---------------~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...++||+.++|+.|+++|++++|+||..               ...+...++..|+.  ++.++.....-...+..  .
T Consensus        46 ~~~l~pgv~e~L~~L~~~G~~l~IvTNQ~gi~~g~~~~~~~~~~~~~~~~~l~~~g~~--~~~~~~~~~~~~~~~~~--~  121 (209)
T d2o2xa1          46 EIVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVF--VDMVLACAYHEAGVGPL--A  121 (209)
T ss_dssp             GCCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCC--CSEEEEECCCTTCCSTT--C
T ss_pred             HeEecccHHHHHHHHHhhCCeEEEecccccchhhhhhhhhhhhhhhHHHHHhhhcccc--cceEEEecccccccccc--c
Confidence            46789999999999999999999999953               12233444555542  44444431110000000  0


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCee
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLI  213 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (265)
                      ......+||           ++.++..+++++++++++++||||+.+|+++|+++|+..+++..+ +....     +.  
T Consensus       122 ~~~~~~rKP-----------~p~ml~~a~~~~~i~~~~~~~VGD~~~Di~aA~~AGi~~i~v~~g-~~~~~-----~~--  182 (209)
T d2o2xa1         122 IPDHPMRKP-----------NPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQGWLVDG-EAAVQ-----PG--  182 (209)
T ss_dssp             CSSCTTSTT-----------SCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSEEEEETC-CCEEE-----TT--
T ss_pred             ccccccccc-----------cchhhhHhHHHhCCCccceEEeCCCHHHHHHHHHCCCcEEEEeCC-CCccc-----CC--
Confidence            001112355           789999999999999999999999999999999988877766543 32111     11  


Q ss_pred             eEEEEeCCCHHHHHHHHHHHHHhhc
Q 044617          214 KAKVHEWSSAEELKKILLHLIGAIS  238 (265)
Q Consensus       214 ~~~~~~~~~~~el~~~l~~~~~~~~  238 (265)
                       ..+....+..++.++++ .++.+.
T Consensus       183 -~~~~~~~~~~e~~dll~-~v~~l~  205 (209)
T d2o2xa1         183 -FAIRPLRDSSELGDLLA-AIETLG  205 (209)
T ss_dssp             -EEEEEESSHHHHHHHHH-HHHHTC
T ss_pred             -ccccCccchhHHHHHHH-HHHHHH
Confidence             22223377777777554 334443

>d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: YihX-like
domain: Putative phosphatase YihX
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=4.6e-19  Score=137.56  Aligned_cols=104  Identities=14%  Similarity=0.182  Sum_probs=87.5

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhc-CcccccceEEecCceecCCCceEEeeccccccCCCccccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHH-GLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLC  148 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~-gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~  148 (265)
                      ..+++++.+++..++++|++++++||+........+..+ ++..+|+.++++              ......||      
T Consensus        83 ~~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~~fd~v~~s--------------~~~~~~Kp------  142 (197)
T d2b0ca1          83 VALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRDAADHIYLS--------------QDLGMRKP------  142 (197)
T ss_dssp             EEECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHHHCSEEEEH--------------HHHTCCTT------
T ss_pred             cccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchhhccceeec--------------cccccccc------
Confidence            467899999999999999999999998877777666665 788889998875              22233466      


Q ss_pred             CCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          149 PSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                           ++.+++.+++++|++|++|++|||+.+|+.+|+++|..++.+...
T Consensus       143 -----~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~~~  187 (197)
T d2b0ca1         143 -----EARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVKDK  187 (197)
T ss_dssp             -----CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECCST
T ss_pred             -----chHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEECCC
Confidence                 899999999999999999999999999999999988877766543

>d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Histidinol phosphatase-like
domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=6.9e-20  Score=139.22  Aligned_cols=108  Identities=12%  Similarity=0.177  Sum_probs=76.3

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHhcCcccccceEEecCceecCCCceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDAN---------------QFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRIL  133 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~---------------~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~  133 (265)
                      ...++||+.++|+.|+++|++++++||.+               ...+...+...|+.  ++.++.+....         
T Consensus        28 ~~~~~pgv~e~L~~L~~~g~~l~i~TNq~~ia~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~i~~~~~~~---------   96 (161)
T d2fpwa1          28 KLAFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ--FDEVLICPHLP---------   96 (161)
T ss_dssp             GCCBCTTHHHHHHHHHHTTEEEEEEEECTTTTSTTSCHHHHHHHHHHHHHHHHHTTCC--EEEEEEECCCG---------
T ss_pred             HceECccHHHHHHHHHHcCCceeeecccccchhHHHHHHHhhhhhhhhhhhccccccc--cceeeeccccc---------
Confidence            56889999999999999999999999964               12344555666653  33444321000         


Q ss_pred             eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          134 PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       134 ~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      ......+||           +|.++.++++++|++|++++||||+..|+.+|+++|+..+.+...
T Consensus        97 ~~~~~~~KP-----------~p~~~~~~~~~~~id~~~~~~IGD~~~Di~aA~~aG~~~i~i~~~  150 (161)
T d2fpwa1          97 ADECDCRKP-----------KVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRE  150 (161)
T ss_dssp             GGCCSSSTT-----------SSGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECBTT
T ss_pred             ccccccccc-----------ccHHHHHHHHhcCCChhcEEEECCCHHHHHHHHHcCCeEEEECCC
Confidence            011123466           789999999999999999999999999999999988887776543

>d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=99.70  E-value=1.7e-16  Score=126.43  Aligned_cols=156  Identities=16%  Similarity=0.177  Sum_probs=100.1

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCcee--------------------------
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYV--------------------------  124 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~--------------------------  124 (265)
                      .+.+.+.+.|++|+++|++++++|++....+.......++...+  +..+...+                          
T Consensus        19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~--i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (230)
T d1wr8a_          19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPV--VAEDGGAISYKKKRIFLASMDEEWILWNEIRKRF   96 (230)
T ss_dssp             CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCE--EEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHC
T ss_pred             ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCccc--ccccceeeeccccccccccccHHHHHHHHHHHhc
Confidence            56788999999999999999999999999998888877765432  11111000                          


Q ss_pred             ----------cCCCceEEe-----------------eccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcC
Q 044617          125 ----------DEQGRLRIL-----------------PYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGD  177 (265)
Q Consensus       125 ----------d~~~~~~~~-----------------~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD  177 (265)
                                +........                 ........+..++.++.+.+|+.+++.+++++|++++++++|||
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD  176 (230)
T d1wr8a_          97 PNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGD  176 (230)
T ss_dssp             TTCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEEC
T ss_pred             ccccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeec
Confidence                      000000000                 00000112333466788999999999999999999999999999


Q ss_pred             CCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHHHHhh
Q 044617          178 GRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHLIGAI  237 (265)
Q Consensus       178 ~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~~~  237 (265)
                      +.||+.|++.   +++.++-++ +. ..+++..   +. +..-.+...+.+.+.++++++
T Consensus       177 ~~NDi~ml~~---ag~~vav~n-a~-~~~k~~A---~~-v~~~~~~~gv~~~i~~~l~~~  227 (230)
T d1wr8a_         177 GENDLDAFKV---VGYKVAVAQ-AP-KILKENA---DY-VTKKEYGEGGAEAIYHILEKF  227 (230)
T ss_dssp             SGGGHHHHHH---SSEEEECTT-SC-HHHHTTC---SE-ECSSCHHHHHHHHHHHHHHHT
T ss_pred             CccHHHHHHH---CCeEEEECC-CC-HHHHHhC---CE-EECCCCcCHHHHHHHHHHHHc
Confidence            9999999954   555665332 22 2233322   22 222244455888888887654

>d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: NagD
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=1.1e-17  Score=136.20  Aligned_cols=71  Identities=13%  Similarity=0.106  Sum_probs=54.6

Q ss_pred             CchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          152 LCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                      ..++..++.+++++|++|++++||||+. +|+.+|+++|+.++++ .+|....+.+...+..++..+   +++.||
T Consensus       176 KP~p~~~~~a~~~lgi~p~e~v~IGD~~~~DI~~a~~aG~~tilV-~~G~~~~~~l~~~~~~pd~i~---~sl~eL  247 (250)
T d2c4na1         176 KPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILV-LSGVSSLDDIDSMPFRPSWIY---PSVAEI  247 (250)
T ss_dssp             TTSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEE-SSSSCCGGGGSSCSSCCSEEE---SSGGGC
T ss_pred             cchhhhHhhhhhhhcCCchheEEecCChHHHHHHHHHCCCCEEEE-CCCCCCHHHHHhCCCCCCEEE---CCHHHh
Confidence            3357899999999999999999999996 6999999999887765 455555554543333456767   888775

>d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YidA
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=1.4e-16  Score=130.57  Aligned_cols=144  Identities=16%  Similarity=0.196  Sum_probs=103.6

Q ss_pred             CCceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHH
Q 044617            1 MADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAI   80 (265)
Q Consensus         1 M~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l   80 (265)
                      |.+|+|+||+||||++++                                                   ..+.+.+.++|
T Consensus         2 ~~iKli~~DlDGTL~~~~---------------------------------------------------~~i~~~~~~al   30 (271)
T d1rkqa_           2 LAIKLIAIDMDGTLLLPD---------------------------------------------------HTISPAVKNAI   30 (271)
T ss_dssp             CCCCEEEECCCCCCSCTT---------------------------------------------------SCCCHHHHHHH
T ss_pred             CCeeEEEEeCCccccCCC---------------------------------------------------CccCHHHHHHH
Confidence            789999999999999873                                                   25678899999


Q ss_pred             HHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEec-Ccee-c-CCCc----------------------------
Q 044617           81 KSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTN-PTYV-D-EQGR----------------------------  129 (265)
Q Consensus        81 ~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~-~~~~-d-~~~~----------------------------  129 (265)
                      ++|+++|++++++|++....+...++.+++...+..+++. ...+ + .++.                            
T Consensus        31 ~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~~~~~  110 (271)
T d1rkqa_          31 AAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKLSREVGSHFHA  110 (271)
T ss_dssp             HHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHHHHHHTCEEEE
T ss_pred             HHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcEEEEcCceeEeccCCCeEEEeecccHHHHHHHHHHHHhhcceEEE
Confidence            9999999999999999999999999988876443332221 1100 0 0000                            


Q ss_pred             ------------------------------------------eE--Ee--e-----------------ccccccCCCccc
Q 044617          130 ------------------------------------------LR--IL--P-----------------YHDSTLSHHGCN  146 (265)
Q Consensus       130 ------------------------------------------~~--~~--~-----------------~~~~~~kp~~~~  146 (265)
                                                                ..  ..  +                 +......++..+
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  190 (271)
T d1rkqa_         111 LDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYTVLKSAPYFLE  190 (271)
T ss_dssp             ECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEEEEEEETTEEE
T ss_pred             EecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhcceEEEEecCceEE
Confidence                                                      00  00  0                 000011223346


Q ss_pred             ccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          147 LCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       147 ~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      ++|.+.+|..+++.++++++++++++++|||+.||+.|.+   .+++.++-.
T Consensus       191 i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~---~~~~~~am~  239 (271)
T d1rkqa_         191 ILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIE---YAGVGVAVD  239 (271)
T ss_dssp             EEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH---HSSEEEECT
T ss_pred             ecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHH---hCCcEEEeC
Confidence            6789999999999999999999999999999999999994   456666644

>d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein YwpJ
species: Bacillus subtilis [TaxId: 1423]

Probab=99.67  E-value=3.1e-16  Score=129.28  Aligned_cols=51  Identities=14%  Similarity=0.088  Sum_probs=44.4

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      .++.+.+.+|..+++++++.+|++++++++|||+.||+.|.+   .+++.++-.
T Consensus       205 ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~---~a~~svam~  255 (285)
T d1nrwa_         205 FELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLE---AAGKGVAMG  255 (285)
T ss_dssp             EEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHH---HSSEEEECT
T ss_pred             EEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHH---hCCeEEEeC
Confidence            467788999999999999999999999999999999999994   456666643

>d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Pyrimidine 5'-nucleotidase (UMPH-1)
domain: Cytosolic 5'-nucleotidase III
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.65  E-value=8.7e-16  Score=126.55  Aligned_cols=167  Identities=15%  Similarity=0.078  Sum_probs=107.9

Q ss_pred             HhCCCCHHHHHHHhc--CCCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceE
Q 044617           54 HSQGKTVEDIANCLR--QCPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLR  131 (265)
Q Consensus        54 ~~~~~~~~~~~~~~~--~~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~  131 (265)
                      ...+...+.+.+.+.  ...+.||+.++++.|+++|++++|+|+|....++.+++++|+...--.|++|...+++++...
T Consensus       116 ~~~~l~~~~i~~~v~~~~i~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~~  195 (291)
T d2bdua1         116 IEQGIPKAKLKEIVADSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLK  195 (291)
T ss_dssp             HHHCCBGGGHHHHHHHSCCCBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBEE
T ss_pred             HHcCCCHHHHHHHHHhcCCCcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeEe
Confidence            344666666666554  578999999999999999999999999999999999999997533226999999888665533


Q ss_pred             EeeccccccCCCcccccCCCCchHHHHHHHHHhcC--CCCceEEEEcCCCCCcccccCCCCCC----eeeecCCCchhhh
Q 044617          132 ILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFG--CGKQRFIYLGDGRGDFCPTLKLRDCD----FVMPRKNYPLWDR  205 (265)
Q Consensus       132 ~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~g--i~~~~~v~vGD~~~Di~~a~~~~~~~----~~~~~~~~~~~~~  205 (265)
                      ......           ....+|...+......+.  -+..+++++|||.+|+.||+.+...+    ++|.+.  ...+.
T Consensus       196 ~~~~~~-----------i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~~~~~~~l~igFL~~--~~ee~  262 (291)
T d2bdua1         196 GFKGEL-----------IHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLND--RVDEL  262 (291)
T ss_dssp             EECSSC-----------CCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTCSCCSEEEEEEEECS--CHHHH
T ss_pred             eccCCc-----------cccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCCccccceeeeehhHh--hHHHH
Confidence            221111           112346555554443322  35578999999999999997544333    233322  22222


Q ss_pred             hhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          206 ICSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      +..--...+..+....+++-+..+|+.+
T Consensus       263 l~~y~~~~DIVl~~d~~~~v~~~il~~i  290 (291)
T d2bdua1         263 LEKYMDSYDIVLVKEESLEVVNSILQKT  290 (291)
T ss_dssp             HHHHHHHSSEEEETCCBCHHHHHHHHHH
T ss_pred             HHHHHhcCCEEEecCCChhHHHHHHHHh
Confidence            2210012234445556777677666654

>d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphoglycolate phosphatase, PGPase
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.65  E-value=2.6e-16  Score=125.61  Aligned_cols=170  Identities=18%  Similarity=0.170  Sum_probs=111.3

Q ss_pred             CceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHH
Q 044617            2 ADVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIK   81 (265)
Q Consensus         2 ~~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~   81 (265)
                      |+|+|+||+||||+++.                                                   ..+.+++.+.|+
T Consensus         2 miKli~~D~DGTL~~~~---------------------------------------------------~~i~~~~~~al~   30 (225)
T d1l6ra_           2 MIRLAAIDVDGNLTDRD---------------------------------------------------RLISTKAIESIR   30 (225)
T ss_dssp             CCCEEEEEHHHHSBCTT---------------------------------------------------SCBCHHHHHHHH
T ss_pred             CeEEEEEecCCCCcCCC---------------------------------------------------CcCCHHHHHHHH
Confidence            57999999999999872                                                   356789999999


Q ss_pred             HHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCc-eecCCCceE-----------------------------
Q 044617           82 SAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPT-YVDEQGRLR-----------------------------  131 (265)
Q Consensus        82 ~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~-~~d~~~~~~-----------------------------  131 (265)
                      .|++.|++++++|++....+..+...+++...+  +..+.. .++..+...                             
T Consensus        31 ~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~--i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (225)
T d1l6ra_          31 SAEKKGLTVSLLSGNVIPVVYALKIFLGINGPV--FGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKRTSMRSILTNRW  108 (225)
T ss_dssp             HHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCE--EEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTTSSCBCCGGGGG
T ss_pred             HHHHCCCEEEEEcCCchhhhHHHHHHcCCCceE--EeecceEEEeCCccEEEecChHHHHHHHHHHHHhcCcceeecccc
Confidence            999999999999999998888888888875431  111111 111100000                             


Q ss_pred             ------Eee--c-------------cccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCC
Q 044617          132 ------ILP--Y-------------HDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRD  190 (265)
Q Consensus       132 ------~~~--~-------------~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~  190 (265)
                            ...  .             ......+..++..+.+.+|+.+++.+++++|++++++++||||.||+.|++   .
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~nD~~m~~---~  185 (225)
T d1l6ra_         109 REASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQ---L  185 (225)
T ss_dssp             CSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHT---S
T ss_pred             eeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCcchHHHHH---H
Confidence                  000  0             000111223345577889999999999999999999999999999999995   4


Q ss_pred             CCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHHHHH
Q 044617          191 CDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKILLHL  233 (265)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~  233 (265)
                      +++.++-.+ +. +.+++.   ++. +...++...+.+.|+++
T Consensus       186 a~~~vav~n-a~-~~~k~~---ad~-v~~~~~~~gi~~~l~~~  222 (225)
T d1l6ra_         186 PVRKACPAN-AT-DNIKAV---SDF-VSDYSYGEEIGQIFKHF  222 (225)
T ss_dssp             SSEEEECTT-SC-HHHHHH---CSE-ECSCCTTHHHHHHHHHT
T ss_pred             CCeEEEECC-Cc-HHHHHh---CCE-EECCCCcCHHHHHHHHh
Confidence            555555432 12 223221   222 22334555677777654

>d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar phosphatase SupH (YbiV)
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=3.4e-16  Score=128.08  Aligned_cols=84  Identities=12%  Similarity=0.111  Sum_probs=60.0

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .++.+.+.+|..+++.+++++|++++++++|||+.||+.|.   ..++..++-.+. ... +++.   ++... .-.+.+
T Consensus       182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml---~~ag~~vam~Na-~~~-lk~~---A~~v~-~~~~~~  252 (269)
T d1rlma_         182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEML---KMARYSFAMGNA-AEN-IKQI---ARYAT-DDNNHE  252 (269)
T ss_dssp             EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH---HHCSEEEECTTC-CHH-HHHH---CSEEC-CCGGGT
T ss_pred             EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHH---HhCCeEEEeCCC-CHH-HHHh---CCEEc-CCCCcc
Confidence            46779999999999999999999999999999999999999   456667764422 222 3221   12222 112223


Q ss_pred             HHHHHHHHHHHhh
Q 044617          225 ELKKILLHLIGAI  237 (265)
Q Consensus       225 el~~~l~~~~~~~  237 (265)
                      -+...|++++++-
T Consensus       253 Gva~~i~~~l~~~  265 (269)
T d1rlma_         253 GALNVIQAVLDNT  265 (269)
T ss_dssp             HHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHhcC
Confidence            3999999988753

>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Enolase-phosphatase E1
domain: Protein UTR4
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.63  E-value=3.6e-16  Score=123.99  Aligned_cols=100  Identities=11%  Similarity=0.082  Sum_probs=76.4

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH-----------HhcCcccccceEEecCceecCCCceEEeecccc
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIM-----------EHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDS  138 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l-----------~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~  138 (265)
                      ..+++++.+++.    .+..+++.++..........           +.+|+.++|+.+++.+             .  .
T Consensus        96 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~Fd~v~~~~-------------~--~  156 (225)
T d2g80a1          96 APVYADAIDFIK----RKKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYIDGYFDIN-------------T--S  156 (225)
T ss_dssp             BCCCHHHHHHHH----HCSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCCEEECHH-------------H--H
T ss_pred             ccchhhHHHHHh----hHHhhhhhhhccchhhhhhhhhhhhhHHHHHHhcCCccccceeeecc-------------c--c
Confidence            345666666553    35678888888766544433           4557888898887741             1  1


Q ss_pred             ccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCC
Q 044617          139 TLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKN  199 (265)
Q Consensus       139 ~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~  199 (265)
                      ..||           .+.++..+++++|+.|++|++|||+.+|+.+|+++|+.++++.+.|
T Consensus       157 ~~KP-----------~p~~f~~~~~~lg~~p~e~l~VgD~~~Dv~~A~~aG~~ti~v~r~g  206 (225)
T d2g80a1         157 GKKT-----------ETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIATGLASRPG  206 (225)
T ss_dssp             CCTT-----------CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEECCTT
T ss_pred             CCCC-----------ChhHhHHHHHhcccCchhceeecCCHHHHHHHHHcCCEEEEEeCCC
Confidence            1366           7999999999999999999999999999999999999888887654

>d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Hypothetical protein TM1742
species: Thermotoga maritima [TaxId: 2336]

Probab=99.63  E-value=6.8e-16  Score=125.97  Aligned_cols=76  Identities=16%  Similarity=0.110  Sum_probs=58.9

Q ss_pred             CchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHHHHHH
Q 044617          152 LCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEELKKIL  230 (265)
Q Consensus       152 ~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l  230 (265)
                      ..++..+..+++++|++|++++||||+. +|+.+|+++|+.++++.. |......+......++..+   +++.||.++|
T Consensus       185 KP~p~~~~~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~-G~~~~~~~~~~~~~PD~ii---~~l~eL~~~l  260 (261)
T d1vjra_         185 KPNPLVVDVISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLT-GETTPEDLERAETKPDFVF---KNLGELAKAV  260 (261)
T ss_dssp             TTSTHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESS-SSCCHHHHHHCSSCCSEEE---SSHHHHHHHH
T ss_pred             CCcHHHHHHHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECC-CCCCHHHHhhcCCCCCEEE---CCHHHHHHHh
Confidence            4467999999999999999999999995 799999998988777754 4433333333333457777   9999999887


Q ss_pred             H
Q 044617          231 L  231 (265)
Q Consensus       231 ~  231 (265)
                      +
T Consensus       261 ~  261 (261)
T d1vjra_         261 Q  261 (261)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative hydrolase EF1188
species: Enterococcus faecalis [TaxId: 1351]

Probab=99.57  E-value=1.8e-15  Score=122.94  Aligned_cols=72  Identities=15%  Similarity=0.216  Sum_probs=52.5

Q ss_pred             CCchHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          151 NLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       151 ~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                      +..++.+++++++++|++|++++||||+. +|+.+|+++|+..+++. +|....+.+.+....++..+   +++.|+
T Consensus       179 ~KP~~~~~~~~~~~~gi~~~~~l~IGD~~~~DI~~a~~aG~~si~V~-~G~~~~~~~~~~~~~Pd~vi---~sl~e~  251 (253)
T d1yv9a1         179 GKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDSLLVT-SGFTPKSAVPTLPTPPTYVV---DSLDEW  251 (253)
T ss_dssp             STTSHHHHHHHHHHHCSCGGGEEEEESCTTTHHHHHHHHTCEEEEET-TSSSCSSSTTTCSSCCSEEE---SSGGGC
T ss_pred             cccchhHHHHHHHHhCCCccceEEecCChHHHHHHHHHCCCCEEEEC-CCCCCHHHHHhcCCCCCEEE---CCHHHc
Confidence            34477889999999999999999999996 69999999888766654 34443333333333456767   777654

>d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.57  E-value=1.3e-14  Score=116.35  Aligned_cols=70  Identities=19%  Similarity=0.091  Sum_probs=51.6

Q ss_pred             cccCCCCchHHHHHHHHHhcC-CCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHH
Q 044617          146 NLCPSNLCKGFVLDHVCTSFG-CGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAE  224 (265)
Q Consensus       146 ~~~~~~~~K~~~i~~~~~~~g-i~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (265)
                      .+++.+.+|..++..++++++ +.++++++|||+.||+.|.+   .++..++-.+. ..        .....+   ++..
T Consensus       172 ~~~~~~~~K~~al~~l~~~~~~~~~~~~~a~GD~~ND~~Ml~---~a~~~va~~Na-~~--------~~~~~~---~~i~  236 (243)
T d1wzca1         172 YTVHGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFE---VVDKVFIVGSL-KH--------KKAQNV---SSII  236 (243)
T ss_dssp             EEEECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHT---TSSEEEEESSC-CC--------TTCEEE---SCHH
T ss_pred             cchhhhhccHHHHHHHHHHhcCCCcccEEEEcCCHhHHHHHH---cCCcEEEeCCC-Ch--------HHHhhh---hHHH
Confidence            456889999999999999995 88999999999999999994   45655554321 11        112334   7788


Q ss_pred             HHHHHH
Q 044617          225 ELKKIL  230 (265)
Q Consensus       225 el~~~l  230 (265)
                      |+.+++
T Consensus       237 ~~~~~i  242 (243)
T d1wzca1         237 DVLEVI  242 (243)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            877765

>d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NagD-like
domain: Putative phosphatase SMU.1415c
species: Streptococcus mutans [TaxId: 1309]

Probab=99.55  E-value=9.3e-15  Score=118.68  Aligned_cols=69  Identities=14%  Similarity=0.252  Sum_probs=51.9

Q ss_pred             hHHHHHHHHHhcCCCCceEEEEcCCC-CCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCCHHHH
Q 044617          154 KGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSSAEEL  226 (265)
Q Consensus       154 K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el  226 (265)
                      .|.+++.+++++|++|++++||||+. +|+.+|+++|+.++++.. |+...+.+......++..+   +++.|+
T Consensus       182 ~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~-G~~~~~~~~~~~~~PD~vi---~sl~e~  251 (253)
T d1wvia_         182 EAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTT-GFTKPEEVPALPIQPDFVL---SSLAEW  251 (253)
T ss_dssp             SHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESS-SSSCTTTGGGCSSCCSEEE---SCGGGC
T ss_pred             CcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECC-CCCCHHHHhhcCCCCCEEE---CCHHHc
Confidence            58999999999999999999999996 599999999988777754 3333333333333456767   777664

>d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sugar-phosphate phosphatase BT4131
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=99.53  E-value=6.8e-15  Score=119.81  Aligned_cols=52  Identities=15%  Similarity=0.172  Sum_probs=44.4

Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      .++++|.+.+|..+++.+++++|++++++++|||+.||+.|.+   .++..++-.
T Consensus       177 ~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~---~a~~svav~  228 (260)
T d2rbka1         177 FADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLR---HAAIGVAMG  228 (260)
T ss_dssp             CCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHH---HSSEEEECT
T ss_pred             EEEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHH---hCCeEEEeC
Confidence            3467789999999999999999999999999999999999994   455555533

>d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: PFL1270w orthologue
species: Plasmodium vivax [TaxId: 5855]

Probab=99.51  E-value=4.5e-14  Score=115.65  Aligned_cols=50  Identities=8%  Similarity=0.152  Sum_probs=43.5

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      .++.+.+.+|..++..+++.++++++++++|||+.||+.|.+   .+++.++-
T Consensus       199 ~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~---~a~~~va~  248 (283)
T d2b30a1         199 AEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLS---NFKYSFAV  248 (283)
T ss_dssp             EEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHH---SCSEEEEC
T ss_pred             EeecCCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHH---hCCcEEEe
Confidence            466788999999999999999999999999999999999994   45556653

>d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP)
species: Escherichia coli [TaxId: 562]

Probab=99.50  E-value=8.3e-14  Score=110.54  Aligned_cols=122  Identities=11%  Similarity=0.022  Sum_probs=81.8

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecC------------------------
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDE------------------------  126 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~------------------------  126 (265)
                      .+.+.++++|+.|+++|++++++|++....+...++.+++.... .+..+...+-.                        
T Consensus        21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~~~-~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (232)
T d1xvia_          21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLP-LIAENGAVIQLAEQWQEIDGFPRIISGISHGEISL   99 (232)
T ss_dssp             CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSC-EEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHH
T ss_pred             cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCCce-EEccCCeEEEecCCccccchhhhhhhHHHHHHHHH
Confidence            45678899999999999999999999999999999999875321 22222211100                        


Q ss_pred             ---------------------------------------C--CceEEeec-----------------cccccCCCccccc
Q 044617          127 ---------------------------------------Q--GRLRILPY-----------------HDSTLSHHGCNLC  148 (265)
Q Consensus       127 ---------------------------------------~--~~~~~~~~-----------------~~~~~kp~~~~~~  148 (265)
                                                             .  ........                 ..........+.+
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  179 (232)
T d1xvia_         100 VLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVL  179 (232)
T ss_dssp             HHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHHTTEEEEECSSCEEEE
T ss_pred             hhhhhhhhhccccccccchhhhhhhhhhcccchhhhhhhhcceeeeecccccHHHHHHHHHHhhhccceeeeccceeecc
Confidence                                                   0  00000000                 0001112334566


Q ss_pred             CCCCchHHHHHHHHH---hcCCCCceEEEEcCCCCCcccccCCCCCCeeee
Q 044617          149 PSNLCKGFVLDHVCT---SFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       149 ~~~~~K~~~i~~~~~---~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                      +.+.+|..+++.+++   ++|++++++++|||+.||+.|.+.   +++.++
T Consensus       180 ~~~~~K~~~~~~l~~~~~~l~i~~~~~iafGD~~NDl~Ml~~---a~~~va  227 (232)
T d1xvia_         180 DASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEV---MDYAVI  227 (232)
T ss_dssp             ETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHT---SSEEEE
T ss_pred             CCCchHHHHHHHHHHHHHHcCCChhcEEEEcCCHhHHHHHHh---CCeEEE
Confidence            888999999888876   468999999999999999999954   444444

>d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Hypothetical protein TM0651
species: Thermotoga maritima [TaxId: 2336]

Probab=99.50  E-value=5.5e-14  Score=114.79  Aligned_cols=51  Identities=18%  Similarity=0.334  Sum_probs=44.7

Q ss_pred             ccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          145 CNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       145 ~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      +++.+.+.+|+.+++.+++++|++++++++|||+.||+.|.   ..+++.++-.
T Consensus       182 ~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml---~~~~~sva~~  232 (267)
T d1nf2a_         182 LEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMF---EEAGLRVAME  232 (267)
T ss_dssp             EEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHH---TTCSEEEECT
T ss_pred             eeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHH---HhCCcEEEeC
Confidence            46678999999999999999999999999999999999999   4566666644

>d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Sucrose-phosphatase Slr0953
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=99.48  E-value=7e-14  Score=112.52  Aligned_cols=52  Identities=13%  Similarity=0.091  Sum_probs=44.2

Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeec
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPR  197 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~  197 (265)
                      ..+++.+.+.+|..+++.+++++|++++++++|||+.||+.|.   ..++..++-
T Consensus       152 ~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~~GD~~ND~~Ml---~~~~~~vav  203 (244)
T d1s2oa1         152 KDVDLLPQRSNKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLF---ETSARGVIV  203 (244)
T ss_dssp             TEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHH---TSSSEEEEC
T ss_pred             cEEEEEeCccchhHHHHHHHHhccCChhhEEEEcCCCCCHHHH---hhCCcEEEe
Confidence            3346668899999999999999999999999999999999999   445555554

>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: Polynucleotide kinase, phosphatase domain
species: Bacteriophage T4 [TaxId: 10665]

Probab=99.42  E-value=8.5e-14  Score=103.58  Aligned_cols=129  Identities=10%  Similarity=-0.024  Sum_probs=77.6

Q ss_pred             ceEEEEecCCCCCCCCchHHHHHHhCchHHHHHHHccCChhHHHHHHHHHHHhCCCCHHHHHHHhcCCCCChhHHHHHHH
Q 044617            3 DVVVVFDFDRTLIDDDSDNWVVTQMGLTHLFNQLRSTLPWNSLMDRMMKELHSQGKTVEDIANCLRQCPLDSHVAAAIKS   82 (265)
Q Consensus         3 ~k~iifD~DGTL~ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~e~l~~   82 (265)
                      .|+|+||+||||+++...                 ....|.                      .+....++|++.++++.
T Consensus         7 pk~vifDiDgTL~~~~~~-----------------~~~~~~----------------------~~~~~~~~p~v~~~l~~   47 (149)
T d1ltqa1           7 PKAVIFDVDGTLAKMNGR-----------------GPYDLE----------------------KCDTDVINPMVVELSKM   47 (149)
T ss_dssp             CEEEEEETBTTTBCCSSC-----------------CTTCGG----------------------GGGGCCBCHHHHHHHHH
T ss_pred             CcEEEEEcCCCcEeCCCC-----------------CcCCcc----------------------ccccCccCHHHHHHHHH
Confidence            689999999999998540                 001111                      11245779999999999


Q ss_pred             HHHcCCcEEEEeCCCHHH---HHHHHHhcCc------ccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCc
Q 044617           83 AHSLGCDLKIVSDANQFY---IETIMEHHGL------LGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLC  153 (265)
Q Consensus        83 l~~~g~~~~ivS~~~~~~---i~~~l~~~gl------~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~  153 (265)
                      |+++|++++++||+...+   +...++..+.      ...+......               ....           ...
T Consensus        48 l~~~G~~Iii~T~R~~~~~~~t~~~l~~~~~~~~~~~~~~~~~~~~~---------------~~~~-----------~~~  101 (149)
T d1ltqa1          48 YALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVPLVMQCQR---------------EQGD-----------TRK  101 (149)
T ss_dssp             HHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCCCSEEEEC---------------CTTC-----------CSC
T ss_pred             HHhccCeEEEEecCcHHHHHHHHHHHHHHhhhhhhcCCCcEEEeecc---------------cccc-----------cCC
Confidence            999999999999986332   1222222110      0111121111               0000           011


Q ss_pred             hHHHHHHHHHhcCCCCce-EEEEcCCCCCcccccCCCCCCeeee
Q 044617          154 KGFVLDHVCTSFGCGKQR-FIYLGDGRGDFCPTLKLRDCDFVMP  196 (265)
Q Consensus       154 K~~~i~~~~~~~gi~~~~-~v~vGD~~~Di~~a~~~~~~~~~~~  196 (265)
                      +.......+.+...+..+ +++|||+..|++||+++|...+.+.
T Consensus       102 d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi~~~~V~  145 (149)
T d1ltqa1         102 DDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVECWQVA  145 (149)
T ss_dssp             HHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCCEEECS
T ss_pred             chHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCCcEEEeC
Confidence            344555555555544445 5678999999999999777655554

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=99.36  E-value=9.1e-14  Score=119.31  Aligned_cols=145  Identities=15%  Similarity=0.115  Sum_probs=98.1

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccce--EEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSE--IYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~--i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      +.+|+.++|+.|+++|++++++||++...+..+++.+|+.++|+.  +++....... ..  ..+......||       
T Consensus       216 p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i~~~~d~~~~-~~--~~~~~~~~~KP-------  285 (380)
T d1qyia_         216 PVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFIATASDVLEA-EN--MYPQARPLGKP-------  285 (380)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGEECHHHHHHH-HH--HSTTSCCCCTT-------
T ss_pred             chhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceEEecchhhhh-hh--hccccccccCC-------
Confidence            456999999999999999999999999999999999999998875  3332110000 00  00111223344       


Q ss_pred             CCCchHHHHHHHH--------------HhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCc--hhhhhhcCCCee
Q 044617          150 SNLCKGFVLDHVC--------------TSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYP--LWDRICSNPMLI  213 (265)
Q Consensus       150 ~~~~K~~~i~~~~--------------~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  213 (265)
                          .|..+..++              +.+++.+++|+||||+.||+.+|++++...++++.+..+  ..+.+.+.  .+
T Consensus       286 ----~p~~~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag~~~Igv~~G~~g~~~~~el~~~--~A  359 (380)
T d1qyia_         286 ----NPFSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDAAGELEAH--HA  359 (380)
T ss_dssp             ----STHHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCEEEEESCBTTBGGGHHHHHHT--TC
T ss_pred             ----ChHHHHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCCCCEEEEecCCCCcccHHHHHhC--CC
Confidence                455555554              445677899999999999999999877655666533111  12222221  24


Q ss_pred             eEEEEeCCCHHHHHHHHHHHHH
Q 044617          214 KAKVHEWSSAEELKKILLHLIG  235 (265)
Q Consensus       214 ~~~~~~~~~~~el~~~l~~~~~  235 (265)
                      +..+   +++.||.++|..+++
T Consensus       360 D~ii---~~~~el~~il~~l~~  378 (380)
T d1qyia_         360 DYVI---NHLGELRGVLDNLLE  378 (380)
T ss_dssp             SEEE---SSGGGHHHHHSCTTT
T ss_pred             CEEE---CCHHHHHHHHHHHHh
Confidence            5666   999999998877654

>d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=1.1e-12  Score=104.33  Aligned_cols=43  Identities=23%  Similarity=0.342  Sum_probs=34.4

Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcC----CCCCcccccCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGD----GRGDFCPTLKL  188 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD----~~~Di~~a~~~  188 (265)
                      ...++.+.+.+|+.++++++   +++++++++|||    |.||++|.+.+
T Consensus       175 ~~lei~~~~vsKg~al~~l~---~~~~~ev~afGD~~~~g~NDi~Ml~~~  221 (243)
T d2amya1         175 ISFDVFPDGWDKRYCLRHVE---NDGYKTIYFFGDKTMPGGNDHEIFTDP  221 (243)
T ss_dssp             TEEEEEETTCSGGGGGGGTT---TSCCSEEEEEECSCC---CCCHHHHCT
T ss_pred             ccceeeccccCHHHHHHHHh---CCCcceEEEEcCCCCCCCCcHHHHHcc
Confidence            34467799999999998875   568899999999    77999999553

>d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Trehalose-phosphatase
domain: Trehalose-6-phosphate phosphatase related protein
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=99.35  E-value=2.6e-12  Score=101.49  Aligned_cols=73  Identities=19%  Similarity=0.095  Sum_probs=52.4

Q ss_pred             CcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecCCCchhhhhhcCCCeeeEEEEeCCC
Q 044617          143 HGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRKNYPLWDRICSNPMLIKAKVHEWSS  222 (265)
Q Consensus       143 ~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (265)
                      ..+++.|.|.+|..+++.++++     +++++|||+.||+.|...++ .+++++.+..         +..++..+   ++
T Consensus       149 ~~idi~p~g~~Kg~al~~l~~~-----~~~i~~GDs~ND~~Mf~~~~-~~~av~~g~~---------~~~A~~~~---~~  210 (229)
T d1u02a_         149 MIIELRVPGVNKGSAIRSVRGE-----RPAIIAGDDATDEAAFEAND-DALTIKVGEG---------ETHAKFHV---AD  210 (229)
T ss_dssp             SEEEEECTTCCHHHHHHHHHTT-----SCEEEEESSHHHHHHHHTTT-TSEEEEESSS---------CCCCSEEE---SS
T ss_pred             eEEEEecCCCCHHHHHHHHhcc-----ccceeecCCCChHHHHhccC-CeEEEEeCCC---------CccCeEEc---CC
Confidence            3446779999999999999875     58999999999999986533 3666664421         12233445   77


Q ss_pred             HHHHHHHHHHH
Q 044617          223 AEELKKILLHL  233 (265)
Q Consensus       223 ~~el~~~l~~~  233 (265)
                      ..|+.++|+.+
T Consensus       211 ~~ev~~~l~~l  221 (229)
T d1u02a_         211 YIEMRKILKFI  221 (229)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            88877766654

>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Predicted hydrolases Cof
domain: Phosphomannomutase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=6.6e-12  Score=99.65  Aligned_cols=46  Identities=17%  Similarity=0.233  Sum_probs=37.8

Q ss_pred             CCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCC----CCCcccccCCC
Q 044617          141 SHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDG----RGDFCPTLKLR  189 (265)
Q Consensus       141 kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~----~~Di~~a~~~~  189 (265)
                      .+.+.++++.+++|+.+++.+++   .+++++++|||+    .||++|.+.++
T Consensus       173 ~~~~lei~~~~vsKg~al~~L~~---~~~~ev~afGD~~~~G~ND~eml~~a~  222 (244)
T d2fuea1         173 GMISFDVFPEGWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGNDFEIFADPR  222 (244)
T ss_dssp             SSSCEEEEETTCSTTHHHHHHTT---SCCSEEEEEESCCSTTSTTHHHHHSTT
T ss_pred             cCccceecchhccHHHHHHHHhc---CChhhEEEEcCCCCCCCCcHHHHHcCC
Confidence            34455788999999999999986   488999999996    59999996544

>d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: phosphatase domain of polynucleotide kinase
domain: 5' polynucleotide kinase-3' phosphatase, middle domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=5.1e-12  Score=97.52  Aligned_cols=81  Identities=15%  Similarity=0.240  Sum_probs=61.0

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCC--------H----HHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDAN--------Q----FYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDST  139 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~--------~----~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~  139 (265)
                      ++|++.+.|+.|+++|+.++|+||..        .    ...+.+++.++..  + .++.+             ++....
T Consensus        51 l~~~v~~~i~~L~~~gy~iiIvTNQ~gI~rg~~s~~~~~~~~~~i~~~l~~~--~-~i~~~-------------~~~~~~  114 (195)
T d1yj5a1          51 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGVP--F-QVLVA-------------THAGLN  114 (195)
T ss_dssp             SCTTHHHHHHHHHHHTCEEEEEEECHHHHHTSSCHHHHHHHHHHHHHHHTSC--C-EEEEE-------------CSSSSS
T ss_pred             ccCCHHHHHHHHHhCCcEEEEecCcchhccCCcCHHHHHHHHHHHHHHcCCC--c-cEEEe-------------cCcccc
Confidence            47999999999999999999999952        1    1244455666643  2 23332             345556


Q ss_pred             cCCCcccccCCCCchHHHHHHHHHhcC----CCCceEEEEcCCC
Q 044617          140 LSHHGCNLCPSNLCKGFVLDHVCTSFG----CGKQRFIYLGDGR  179 (265)
Q Consensus       140 ~kp~~~~~~~~~~~K~~~i~~~~~~~g----i~~~~~v~vGD~~  179 (265)
                      +||           ++.++..++++++    ++.++++||||..
T Consensus       115 RKP-----------~~GM~~~~~~~~n~~~~id~~~S~~IGD~~  147 (195)
T d1yj5a1         115 RKP-----------VSGMWDHLQEQANEGIPISVEDSVFVGDAA  147 (195)
T ss_dssp             STT-----------STHHHHHHHHTSSSSCCCCGGGCEEECSCC
T ss_pred             CCC-----------ccHHHHHHHHHhcccccCCcCceEEEeCcc
Confidence            778           8999999999985    8899999999975

>d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Probable phosphatase YrbI
domain: Probable phosphatase YrbI
species: Haemophilus influenzae, HI1679 [TaxId: 727]

Probab=99.15  E-value=4.7e-12  Score=96.63  Aligned_cols=83  Identities=14%  Similarity=0.181  Sum_probs=68.3

Q ss_pred             HHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccCCCCchHHHH
Q 044617           79 AIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCPSNLCKGFVL  158 (265)
Q Consensus        79 ~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~~~~~K~~~i  158 (265)
                      .+..|+..|+.++++|+.....+....+.+++.    .++..              .                .+|...+
T Consensus        40 gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~----~~~~~--------------~----------------~~K~~~l   85 (177)
T d1k1ea_          40 GIKMLMDADIQVAVLSGRDSPILRRRIADLGIK----LFFLG--------------K----------------LEKETAC   85 (177)
T ss_dssp             HHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC----EEEES--------------C----------------SCHHHHH
T ss_pred             HHHHHhhhcEEEEEecCCchhHHHHHHhhhccc----ccccc--------------c----------------ccHHHHH
Confidence            578889999999999999999999988988864    22321              1                1289999


Q ss_pred             HHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          159 DHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       159 ~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                      +.+++++++++++++||||+.||+.+.+   .+++.++-.
T Consensus        86 ~~~~~~~~i~~~~v~~vGDd~nDl~~l~---~~g~siap~  122 (177)
T d1k1ea_          86 FDLMKQAGVTAEQTAYIGDDSVDLPAFA---ACGTSFAVA  122 (177)
T ss_dssp             HHHHHHHTCCGGGEEEEECSGGGHHHHH---HSSEEEECT
T ss_pred             HHHHHHhcCCcceeEEecCCccHHHHHh---hCCeEEEcC
Confidence            9999999999999999999999999994   466677654

>d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Cation-transporting ATPase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.96  E-value=1.5e-09  Score=78.56  Aligned_cols=89  Identities=16%  Similarity=0.182  Sum_probs=67.8

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      -++.|++++.++.|++.|+++.++|+.....+..+.+.+|+.    .+++.-   .        |.              
T Consensus        20 D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI~----~v~~~~---~--------p~--------------   70 (135)
T d2b8ea1          20 DTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----LVIAEV---L--------PH--------------   70 (135)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS----EEECSC---C--------HH--------------
T ss_pred             CCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhhh----hhcccc---c--------hh--------------
Confidence            367899999999999999999999999999999999999975    444420   0        11              


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                         .|...++...+.     ..+.|+||+.||..+.+   .+++.++-.
T Consensus        71 ---~k~~~v~~~q~~-----~~v~~vGDg~nD~~aL~---~Advgia~~  108 (135)
T d2b8ea1          71 ---QKSEEVKKLQAK-----EVVAFVGDGINDAPALA---QADLGIAVG  108 (135)
T ss_dssp             ---HHHHHHHHHTTT-----SCEEEEECSSSSHHHHH---HSSEEEEEC
T ss_pred             ---HHHHHHHHHHcC-----CEEEEEeCCCCcHHHHH---hCCeeeecC
Confidence               166666554332     57899999999999884   456666643

>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Class B acid phosphatase, AphA
domain: Class B acid phosphatase, AphA
species: Escherichia coli [TaxId: 562]

Probab=98.75  E-value=7e-10  Score=85.59  Aligned_cols=95  Identities=14%  Similarity=0.141  Sum_probs=61.2

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHH---HHHHHH-HhcCcccc--cceEEecCceecCCCceEEeeccccccCCC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQF---YIETIM-EHHGLLGC--FSEIYTNPTYVDEQGRLRILPYHDSTLSHH  143 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~---~i~~~l-~~~gl~~~--f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~  143 (265)
                      ..+.||++++++.++++|++++.+||+...   .....+ +.+|+...  .+.++..    +   .    +.        
T Consensus        85 A~p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~~vll~~----~---~----~~--------  145 (209)
T d2b82a1          85 SIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMNPVIFAG----D---K----PG--------  145 (209)
T ss_dssp             CEECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBCCCEECC----C---C----TT--------
T ss_pred             cCcchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCcccccceEeeC----C---C----CC--------
Confidence            456789999999999999999999997533   233334 45776421  1122221    0   0    00        


Q ss_pred             cccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCCCeeeecC
Q 044617          144 GCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDCDFVMPRK  198 (265)
Q Consensus       144 ~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~~~~~~~~  198 (265)
                             ...|...+    +++++    ++++||..+|+.+|..+|..++-+.+.
T Consensus       146 -------K~~rr~~I----k~y~I----~l~~GD~l~Df~aA~eagi~~iRi~r~  185 (209)
T d2b82a1         146 -------QNTKSQWL----QDKNI----RIFYGDSDNDITAARDVGARGIRILRA  185 (209)
T ss_dssp             -------CCCSHHHH----HHTTE----EEEEESSHHHHHHHHHTTCEEEECCCC
T ss_pred             -------chHHHHHH----HHcCe----EEEecCCHHHHhHHHHcCCCceEeecc
Confidence                   01144444    34554    789999999999998877776666554

>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: AF1437-like
domain: Hypothetical protein AF1437
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.38  E-value=1e-06  Score=68.13  Aligned_cols=191  Identities=10%  Similarity=0.063  Sum_probs=119.5

Q ss_pred             EEEEecCCCCCCCCchHHHHHHhCch-HH------HHHHH----ccCCh--hHHHHHHHHHHHhCCCCHHHHHHHhc-CC
Q 044617            5 VVVFDFDRTLIDDDSDNWVVTQMGLT-HL------FNQLR----STLPW--NSLMDRMMKELHSQGKTVEDIANCLR-QC   70 (265)
Q Consensus         5 ~iifD~DGTL~ds~~~~~~~~~~~~~-~~------~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   70 (265)
                      +.++||.|-|.-.+....++.++--. ..      +..++    ++-++  -.-.+-....+...|++.+.+.++.. ..
T Consensus         1 ~fvtDcEGPlslnDnA~E~~a~~~~~grfF~~lS~yDD~L~~E~~reGY~aG~TLKLIvPFl~a~Gvt~edL~~fSE~~~   80 (308)
T d1y8aa1           1 MFFTDWEGPWILTDFALELCMAVFNNARFFSNLSEYDDYLAYEVRREGYEAGYTLKLLTPFLAAAGVKNRDVERIAELSA   80 (308)
T ss_dssp             EEEECSBTTTBCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCCTTCCTTTHHHHHHHHHHHTTCCHHHHHHHHHHHC
T ss_pred             CceeccCCCCcccccHHHHHHhcCCCcchhhhhhhhhhHHHHHhhccCCCCccchhhHHHHHHHhCCCHHHHHHHhhhce
Confidence            36899999999887655555443211 11      11222    11111  11233344556677899888887776 78


Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceE-------------------
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLR-------------------  131 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~-------------------  131 (265)
                      .+.||+.++++.+++. ++-+|+|.+-..+++++..+.|+.  +. +++++..+|.-....                   
T Consensus        81 ~lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp--~e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~~d~~~e  156 (308)
T d1y8aa1          81 KFVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR--GE-LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE  156 (308)
T ss_dssp             CBCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC--SE-EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred             eecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC--ce-eecccccccccCCChHHHHHHHHHhhhccCccHH
Confidence            9999999999999997 899999999999999999999984  33 666554444211100                   


Q ss_pred             -E----eeccccccCCCccc-ccCCC-CchHHHHHHHHHhcCCCCceEEEEcCCCCCcccccCCCCC-CeeeecCCCc
Q 044617          132 -I----LPYHDSTLSHHGCN-LCPSN-LCKGFVLDHVCTSFGCGKQRFIYLGDGRGDFCPTLKLRDC-DFVMPRKNYP  201 (265)
Q Consensus       132 -~----~~~~~~~~kp~~~~-~~~~~-~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di~~a~~~~~~-~~~~~~~~~~  201 (265)
                       .    ...........-++ .-+.| ..|..+++..++..++++  .+|||||.+|+++.+.++.. ++.+...|..
T Consensus       157 el~e~~d~~f~~~e~~~i~e~Vk~VGgg~k~~i~~~~~~~~~~~~--~~~VGDSITDve~Lr~~r~~gGlaIsFNGN~  232 (308)
T d1y8aa1         157 ELFRKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDF--PVVVGDSISDYKMFEAARGLGGVAIAFNGNE  232 (308)
T ss_dssp             HHHHHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSS--CEEEECSGGGHHHHHHHHHTTCEEEEESCCH
T ss_pred             HHHHHHHHHhccchHhhHHhhhcccCCchhHHHHHhhcccccCCc--ceeccCccccHHHHHHHhcCCCeeEEecCcc
Confidence             0    00000000000010 11233 346677888888888877  49999999999998776664 5666655533

>d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Meta-cation ATPase, catalytic domain P
domain: Calcium ATPase, catalytic domain P
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.36  E-value=1.1e-06  Score=65.58  Aligned_cols=41  Identities=17%  Similarity=0.278  Sum_probs=38.9

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcc
Q 044617           71 PLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLL  111 (265)
Q Consensus        71 ~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~  111 (265)
                      ++.+++.+.|+.|++.|+++.++|+.....+..+.+.+|+.
T Consensus        20 p~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~   60 (168)
T d1wpga2          20 PPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF   60 (168)
T ss_dssp             CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSS
T ss_pred             CCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCC
Confidence            67899999999999999999999999999999999999984

>d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein VC0232
domain: Hypothetical protein VC0232
species: Vibrio cholerae [TaxId: 666]

Probab=98.35  E-value=8.6e-07  Score=62.41  Aligned_cols=49  Identities=20%  Similarity=0.320  Sum_probs=38.8

Q ss_pred             CCCCChhHHHHHHHHHHcCCcEEEEeCCC---------------HHHHHHHHHhcCcccccceEEe
Q 044617           69 QCPLDSHVAAAIKSAHSLGCDLKIVSDAN---------------QFYIETIMEHHGLLGCFSEIYT  119 (265)
Q Consensus        69 ~~~~~~g~~e~l~~l~~~g~~~~ivS~~~---------------~~~i~~~l~~~gl~~~f~~i~~  119 (265)
                      ...+.+++.+.+..|+++|+.++|.|++.               ...+...|+..|+.  ++.++-
T Consensus        22 ~~~P~~~~Ie~l~~l~~~G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~gI~--Yd~Li~   85 (124)
T d1xpja_          22 NVLPRLDVIEQLREYHQLGFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQVP--YDEILV   85 (124)
T ss_dssp             GCCBCHHHHHHHHHHHHTTCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTTCC--CSEEEE
T ss_pred             ccCcCHHHHHHHHHHHHCCCEEEEEecCCccccCCcHHHHHHHHHHHHHHHHHHcCCC--ceEEEE
Confidence            45778999999999999999999999884               23466778888984  455553

>d1ta0a_ c.108.1.16 (A:) Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: NLI interacting factor-like phosphatase
domain: Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, NRAMP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.01  E-value=1.5e-05  Score=60.02  Aligned_cols=84  Identities=12%  Similarity=0.148  Sum_probs=59.0

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHhcCcccccceEEecCceecCCCceEEeeccccccCCCcccccC
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEHHGLLGCFSEIYTNPTYVDEQGRLRILPYHDSTLSHHGCNLCP  149 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~~gl~~~f~~i~~~~~~~d~~~~~~~~~~~~~~~kp~~~~~~~  149 (265)
                      +.+.||+.++|+.+.+. +.++|-|.+...+++.+++.++-...|...+..+....         ..     +       
T Consensus        54 v~~RP~l~eFL~~l~~~-yei~I~Ta~~~~YA~~il~~ldp~~~~~~~~~r~~c~~---------~~-----~-------  111 (181)
T d1ta0a_          54 VLKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWGAFRARLFRESCVF---------HR-----G-------  111 (181)
T ss_dssp             EEECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCSSCCEEEEECGGGSEE---------ET-----T-------
T ss_pred             EecCCCHHHHHHHHHhc-eEEEEEcCCcHHHHHHHHHHhccCCceeEEEEeeeeee---------cC-----C-------
Confidence            45799999999999986 99999999999999999999877655554444211000         00     0       


Q ss_pred             CCCchHHHHHHHHHhcCCCCceEEEEcCCCCCc
Q 044617          150 SNLCKGFVLDHVCTSFGCGKQRFIYLGDGRGDF  182 (265)
Q Consensus       150 ~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~~Di  182 (265)
                            . ..+-++.+|-+.+++++|.|+..-.
T Consensus       112 ------~-~~KdL~~l~~~l~~vvivDd~~~~~  137 (181)
T d1ta0a_         112 ------N-YVKDLSRLGRDLRRVLILDNSPASY  137 (181)
T ss_dssp             ------E-EECCGGGSCSCGGGEEEECSCGGGG
T ss_pred             ------c-ccccHhhcCCCHHHeEEEcCChhhh
Confidence                  0 0011345567788999999987644

>d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: BT0820-like
domain: Hypothetical protein BT0820
species: Bacteroides thetaiotaomicron [TaxId: 818]

Probab=97.88  E-value=8.1e-06  Score=57.24  Aligned_cols=46  Identities=13%  Similarity=-0.045  Sum_probs=35.4

Q ss_pred             CCCChhHHHHHHHHHHcCCcEEEEeCCCHHH---HHHHHHhcCcccccceE
Q 044617           70 CPLDSHVAAAIKSAHSLGCDLKIVSDANQFY---IETIMEHHGLLGCFSEI  117 (265)
Q Consensus        70 ~~~~~g~~e~l~~l~~~g~~~~ivS~~~~~~---i~~~l~~~gl~~~f~~i  117 (265)
                      ..+.|++.++|+.|+++|+.++|.|++....   ....++..|+.  |+.+
T Consensus        20 ~kPi~~~Ie~l~~L~~~G~~IIi~TaR~~~~~~~t~~wL~~~~i~--yd~i   68 (122)
T d2obba1          20 GEEIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE--FYAA   68 (122)
T ss_dssp             CCBCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC--CSEE
T ss_pred             ccccHHHHHHHHHHHHCCCeEEEEecCCCcchHHHHHHHHHcCCC--ceeh
Confidence            3578999999999999999999999987654   34455666664  4444

>d1q92a_ c.108.1.8 (A:) 5'(3')-deoxyribonucleotidase (dNT-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5'(3')-deoxyribonucleotidase (dNT-2)
domain: 5'(3')-deoxyribonucleotidase (dNT-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=7.1e-05  Score=56.71  Aligned_cols=31  Identities=19%  Similarity=0.098  Sum_probs=25.4

Q ss_pred             hcCCCCChhHHHHHHHHHHcCC-cEEEEeCCC
Q 044617           67 LRQCPLDSHVAAAIKSAHSLGC-DLKIVSDAN   97 (265)
Q Consensus        67 ~~~~~~~~g~~e~l~~l~~~g~-~~~ivS~~~   97 (265)
                      +...+++||+.+++..|++.|. .+.++|...
T Consensus        70 f~~L~p~~gA~e~l~~L~~~~~~~v~i~t~~~  101 (195)
T d1q92a_          70 FFELEPLPGAVEAVKEMASLQNTDVFICTSPI  101 (195)
T ss_dssp             TTTCCBCTTHHHHHHHHHHSTTEEEEEEECCC
T ss_pred             HhhCCcccCHHHHHHHHhhccCccceEEcccc
Confidence            4567899999999999998764 678888764

>d2bdea1 c.108.1.23 (A:2-459) Cytosolic IMP-GMP specific 5'-nucleotidase {Legionella pneumophila [TaxId: 446]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: 5' nucleotidase-like
domain: Cytosolic IMP-GMP specific 5'-nucleotidase
species: Legionella pneumophila [TaxId: 446]

Probab=97.31  E-value=0.00021  Score=60.75  Aligned_cols=115  Identities=16%  Similarity=0.242  Sum_probs=76.2

Q ss_pred             CChhHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHh-c--------CcccccceEEecCc---eec----------CCCc
Q 044617           72 LDSHVAAAIKSAHSLGCDLKIVSDANQFYIETIMEH-H--------GLLGCFSEIYTNPT---YVD----------EQGR  129 (265)
Q Consensus        72 ~~~g~~e~l~~l~~~g~~~~ivS~~~~~~i~~~l~~-~--------gl~~~f~~i~~~~~---~~d----------~~~~  129 (265)
                      -.|.+..+|..|++.|.+++++||+.-.++...++. +        .+.++||.|+....   .+.          +.|.
T Consensus       186 k~~~l~~~L~~lr~~GKklFLiTNS~~~y~~~~m~y~~~~~~~~g~dWr~lFDvVIv~A~KP~FF~~~~~~~~v~~~~g~  265 (458)
T d2bdea1         186 REKEVVEGLKHFIRYGKKIFILTNSEYSYSKLLLDYALSPFLDKGEHWQGLFEFVITLANKPRFFYDNLRFLSVNPENGT  265 (458)
T ss_dssp             CCHHHHHHHHHHHTTTCEEEEECSSCHHHHHHHHHHHHGGGSCTTCCGGGTEEEEEESCCHHHHHHSCCCEEEECTTTCC
T ss_pred             CChhHHHHHHHHHHcCCeEEEEecCcHHHHHHHhhhhcccCCCCCCChHHhceEEEeCCCCCCccCCCCcceEEeCCCCc
Confidence            368899999999999999999999999998888875 3        56788998886421   111          1222


Q ss_pred             eEEeeccccccCCCcccccCCCCchHHHHHHHHHhcCCCCceEEEEcCCC-CCccccc-CCCCCCeeeec
Q 044617          130 LRILPYHDSTLSHHGCNLCPSNLCKGFVLDHVCTSFGCGKQRFIYLGDGR-GDFCPTL-KLRDCDFVMPR  197 (265)
Q Consensus       130 ~~~~~~~~~~~kp~~~~~~~~~~~K~~~i~~~~~~~gi~~~~~v~vGD~~-~Di~~a~-~~~~~~~~~~~  197 (265)
                      +..   .....+|.        +=...-...+.+-+|....+++||||+. .|+..++ ..|+.+++++.
T Consensus       266 l~~---~~~~~~~~--------vY~gGn~~~l~~llg~~g~~VLY~GDhi~~Di~~~kk~~gWrT~~Ii~  324 (458)
T d2bdea1         266 MTN---VHGPIVPG--------VYQGGNAKKFTEDLGVGGDEILYIGDHIYGDILRLKKDCNWRTALVVE  324 (458)
T ss_dssp             EEE---CCSCCCSE--------EEEECCHHHHHHHTTCCGGGEEEEESSCCSCHHHHHHHHCSEEEEECT
T ss_pred             ccc---CCccccCC--------ccccCCHHHHHHHhCCCCCcEEEECCccchhhhhhhhhcCCceEEehH
Confidence            210   00111110        0012225556666677888999999996 9986664 45777777764

>d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: HAD-like
superfamily: HAD-like
family: Hypothetical protein MW1667 (SA1546)
domain: Hypothetical protein MW1667 (SA1546)
species: Staphylococcus aureus [TaxId: 1280]

Probab=83.31  E-value=0.19  Score=41.22  Aligned_cols=16  Identities=19%  Similarity=0.574  Sum_probs=14.3

Q ss_pred             eEEEEecCCCCCCCCc
Q 044617            4 VVVVFDFDRTLIDDDS   19 (265)
Q Consensus         4 k~iifD~DGTL~ds~~   19 (265)
                      |.|+||+||+|++...
T Consensus         2 ~~i~fd~dGVll~~~~   17 (380)
T d1qyia_           2 KKILFDVDGVFLSEER   17 (380)
T ss_dssp             CEEEECSBTTTBCSHH
T ss_pred             ceEEEeCCcEEEccee
Confidence            7899999999999854