Citrus Sinensis ID: 044654

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------
Protein Sequence
MALKHVFFILALTFLIMANLQMQPPEMIASTTCWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVIDH
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccEEEEEEcccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccEEEEEEcccccccccccEEEcc
Coil and Loop (DISEMBL)
MALKHVFFILALTFLIMANlqmqppemiaSTTCWNVLMNLKSCSNEIVIFFLNsqadigpdccrvidh
Flexible Loop (DISEMBL)
MALKHVFFILALTFLIMANLQMQPPEMIASTTCWNVLMNLKSCSNEIVIFFLnsqadigpdccRVIDH
Low Complexity Region (SEG)
MALKHVFFILALTFLIMANLQMQPPEMIASTTCWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVIDH
Disordered region (IsUnstruct)
***KHVFFILALTFLIMANLQMQPPEMIASTTCWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVI**
Disordered Region (DISOPRED)
****HVFFILALTFLIMANL***********TCWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRV***
Disordered Region (DISEMBL)
MALKHVFFILALTFLIMANLQMQPPEMIASTTCWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVIDH
Disordered Region (DISPRO)
MALKHVFFILALTFLIMANLQMQPPEMIASTTCWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVID*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALKHVFFILALTFLIMANLQMQPPEMIASTTCWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVIDH
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	68	2.2.26 [Sep-21-2011]
Q9SJ24	125	Egg cell-secreted protein	yes	no	0.985	0.536	0.362	2e-07
Q9SJ23	125	Egg cell-secreted protein	no	no	0.985	0.536	0.337	3e-07
Q9T039	127	Egg cell-secreted protein	no	no	0.514	0.275	0.571	7e-07
Q9SRD8	158	Egg cell-secreted protein	no	no	0.5	0.215	0.529	7e-06

>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 13/80 (16%)

Query: 1  MALKHVFFILALTFLIMANLQMQP-PEMIASTT------------CWNVLMNLKSCSNEI 47
          MA    F    +  L++ N+  +  PE   ST             CWN L  LKSC+NEI
Sbjct: 1  MASNTSFLFATIAILLVLNISGRTLPETEDSTNIAARLNGGGLMECWNALYELKSCTNEI 60

Query: 48 VIFFLNSQADIGPDCCRVID 67
          V+FFLN +  +G DCC+ ++
Sbjct: 61 VLFFLNGETKLGVDCCQAVE 80

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1

 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 13/80 (16%)

Query: 1  MALKHVFFILALTFLIMANLQMQPPEMIASTT-------------CWNVLMNLKSCSNEI 47
          MA    F  + +T L++ N+  +    +A +T             CW+ L  LKSC+NEI
Sbjct: 1  MASNTSFLFVTVTLLLVLNVSSRALPPVADSTNIAARLTGGGLMQCWDALYELKSCTNEI 60

Query: 48 VIFFLNSQADIGPDCCRVID 67
          V+FFLN +  +G  CC  +D
Sbjct: 61 VLFFLNGETKLGYGCCNAVD 80

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1

 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/35 (57%), Positives = 25/35 (71%)

Query: 33 CWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVID 67
          CWN L  LKSC+NEIV+FFLN +  +G  CC  +D
Sbjct: 48 CWNALYELKSCTNEIVLFFLNGETKLGVSCCESVD 82

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 33 CWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVI 66
          CW+ LM L+ CS E+++FFLN +  IGP CC  I
Sbjct: 57 CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAI 90

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	68
296082551	135	unnamed protein product [Vitis vinifera]	0.955	0.481	0.444	9e-11
224060465	146	predicted protein [Populus trichocarpa]	0.5	0.232	0.705	2e-08
255578404	136	conserved hypothetical protein [Ricinus	0.970	0.485	0.382	9e-08
359482498	128	PREDICTED: uncharacterized protein LOC10	0.970	0.515	0.407	2e-07
6683763	174	ECA1 protein [Hordeum vulgare subsp. vul	0.808	0.316	0.464	8e-07
255578398	135	conserved hypothetical protein [Ricinus	0.5	0.251	0.666	3e-06
357120013	166	PREDICTED: uncharacterized protein LOC10	0.5	0.204	0.588	3e-06
297825031	125	hypothetical protein ARALYDRAFT_900605 [	0.985	0.536	0.337	4e-06
297825029	125	hypothetical protein ARALYDRAFT_900604 [	0.985	0.536	0.362	4e-06
125543485	151	hypothetical protein OsI_11152 [Oryza sa	0.5	0.225	0.588	5e-06

>gi|296082551|emb|CBI21556.3| unnamed protein product [Vitis vinifera]

 Score = 70.9 bits (172), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 16/81 (19%)

Query: 3  LKHVFFILALTFLIMAN-------LQMQPPEM---------IASTTCWNVLMNLKSCSNE 46
          +K+VF ++AL++LI          + M+P E+              CWN L+ LKSC+NE
Sbjct: 4  IKNVFLLVALSWLITNASASRELPMSMKPAELDLVARLETSGGLVECWNALVELKSCTNE 63

Query: 47 IVIFFLNSQADIGPDCCRVID 67
          I++FFLN QADIGPDCC  ID
Sbjct: 64 IILFFLNGQADIGPDCCGAID 84

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060465|ref|XP_002300213.1| predicted protein [Populus trichocarpa] gi|222847471|gb|EEE85018.1| predicted protein [Populus trichocarpa]

 Score = 62.8 bits (151), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/34 (70%), Positives = 29/34 (85%)

Query: 33 CWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVI 66
          CWN L+ +KSC+NEIV+FF+  QADIGPDCCR I
Sbjct: 51 CWNALVEIKSCTNEIVLFFMTGQADIGPDCCRAI 84

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578404|ref|XP_002530067.1| conserved hypothetical protein [Ricinus communis] gi|223530420|gb|EEF32307.1| conserved hypothetical protein [Ricinus communis]

 Score = 60.8 bits (146), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 15/81 (18%)

Query: 1  MALKHVFFILALTFLIMANLQMQPPEMIASTT---------------CWNVLMNLKSCSN 45
          MA K +  +L LT +I +    +    I+  +               CWN L+ +KSCSN
Sbjct: 1  MAFKIMTLLLGLTLVIASATAARDVPFISGNSLEARIEGSSSSSLVDCWNALIEIKSCSN 60

Query: 46 EIVIFFLNSQADIGPDCCRVI 66
          EI++FFLN   DIG DCCR I
Sbjct: 61 EIILFFLNGHTDIGADCCRSI 81

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482498|ref|XP_002274398.2| PREDICTED: uncharacterized protein LOC100260034 [Vitis vinifera] gi|147772490|emb|CAN65099.1| hypothetical protein VITISV_039724 [Vitis vinifera] gi|297743029|emb|CBI35896.3| unnamed protein product [Vitis vinifera]

 Score = 60.1 bits (144), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 15/81 (18%)

Query: 1  MALKHVFFILALTFLIMANLQMQP-----PEMIAST---------TCWNVLMNLKSCSNE 46
          MALK +F ++ALT+L MAN          P +  +T          CWN LM ++ C+NE
Sbjct: 1  MALKTLFLLVALTWL-MANAAATRDLPTNPGLDLTTRLETSGGLVECWNALMEIRQCTNE 59

Query: 47 IVIFFLNSQADIGPDCCRVID 67
          I++FFLN Q  +GP+CC+ I 
Sbjct: 60 IILFFLNGQTVLGPECCQAIS 80

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6683763|gb|AAF23356.1|AF109193_1 ECA1 protein [Hordeum vulgare subsp. vulgare] gi|326489569|dbj|BAK01765.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score = 57.8 bits (138), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)

Query: 11 ALTFLIMANLQMQPPEMIASTTCWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVI 66
          A TF+  A+L  +  E   S  CW  L+++KSC+ EI++FFLN +A +GP CCR I
Sbjct: 35 ATTFVRAADLADRL-EGAVSQQCWETLLHIKSCTGEIILFFLNGEAYLGPGCCRAI 89

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578398|ref|XP_002530064.1| conserved hypothetical protein [Ricinus communis] gi|223530417|gb|EEF32304.1| conserved hypothetical protein [Ricinus communis]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 24/36 (66%), Positives = 27/36 (75%), Gaps = 2/36 (5%)

Query: 33 CWNVLMNLKSCSNEIVIFFLNSQAD--IGPDCCRVI 66
          CWN LM +KSCSNEI++FFLN Q D  IG DCC  I
Sbjct: 54 CWNALMEIKSCSNEIILFFLNGQTDITIGADCCSAI 89

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357120013|ref|XP_003561726.1| PREDICTED: uncharacterized protein LOC100836522 [Brachypodium distachyon]

 Score = 55.8 bits (133), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 26/34 (76%)

Query: 33 CWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVI 66
          CW  LM +KSC+ EI++FFLN +A +GP CCR I
Sbjct: 59 CWESLMEIKSCTGEIILFFLNGEAYLGPGCCRAI 92

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825031|ref|XP_002880398.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata] gi|297326237|gb|EFH56657.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata]

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 13/80 (16%)

Query: 1  MALKHVFFILALTFLIMANLQMQPPEMIASTT-------------CWNVLMNLKSCSNEI 47
          MA    F  + +T L+  N+  +   ++A +T             CW+ L  LKSC+NEI
Sbjct: 1  MASNTSFLFVTVTLLLALNVSGRTLPVVADSTNIAARLTGGGLMQCWDALYELKSCTNEI 60

Query: 48 VIFFLNSQADIGPDCCRVID 67
          V+FFLN +  +G  CC  +D
Sbjct: 61 VLFFLNGETKLGSGCCNAVD 80

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825029|ref|XP_002880397.1| hypothetical protein ARALYDRAFT_900604 [Arabidopsis lyrata subsp. lyrata] gi|297326236|gb|EFH56656.1| hypothetical protein ARALYDRAFT_900604 [Arabidopsis lyrata subsp. lyrata]

 Score = 55.5 bits (132), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 13/80 (16%)

Query: 1  MALKHVFFILALTFLIMANLQMQP-PEMIASTT------------CWNVLMNLKSCSNEI 47
          MA    F +  +  L++ N+  +  PE   ST             CWN L  LKSC+NEI
Sbjct: 1  MASYTSFLVAIVALLLVLNISGRTLPETADSTNIAARLNGGGLMECWNALYELKSCTNEI 60

Query: 48 VIFFLNSQADIGPDCCRVID 67
          V+FFLN +  +G DCC+ ++
Sbjct: 61 VLFFLNGETKLGVDCCQAVE 80

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|125543485|gb|EAY89624.1| hypothetical protein OsI_11152 [Oryza sativa Indica Group]

 Score = 55.5 bits (132), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 20/34 (58%), Positives = 27/34 (79%)

Query: 33 CWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVI 66
          CW VLM +KSC+ EI++FF+N +A +GP CCR I
Sbjct: 47 CWEVLMEIKSCTGEILLFFINGEAYLGPGCCRAI 80

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	68
TAIR|locus:2052536	125	EC1.2 "AT2G21740" [Arabidopsis	0.514	0.28	0.571	7.6e-09
TAIR|locus:2136293	127	EC1.4 "AT4G39340" [Arabidopsis	0.514	0.275	0.571	2.6e-08
TAIR|locus:2052556	125	EC1.3 "AT2G21750" [Arabidopsis	0.985	0.536	0.362	4.2e-08
TAIR|locus:2030136	158	EC1.1 "AT1G76750" [Arabidopsis	0.5	0.215	0.529	4.8e-07
TAIR|locus:2176080	155	EC1.5 "AT5G64720" [Arabidopsis	0.5	0.219	0.428	3.3e-05

TAIR|locus:2052536 EC1.2 "AT2G21740" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 20/35 (57%), Positives = 27/35 (77%)

Query:    33 CWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVID 67
             CWN L  LKSC+NEIV+FFLN +  +G DCC+ ++
Sbjct:    46 CWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVE 80

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2136293 EC1.4 "AT4G39340" [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 20/35 (57%), Positives = 25/35 (71%)

Query:    33 CWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVID 67
             CWN L  LKSC+NEIV+FFLN +  +G  CC  +D
Sbjct:    48 CWNALYELKSCTNEIVLFFLNGETKLGVSCCESVD 82

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052556 EC1.3 "AT2G21750" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 29/80 (36%), Positives = 42/80 (52%)

Query:     1 MALKHVFFILALTFLIMANLQMQ--PP-----EMIASTT------CWNVLMNLKSCSNEI 47
             MA    F  + +T L++ N+  +  PP      + A  T      CW+ L  LKSC+NEI
Sbjct:     1 MASNTSFLFVTVTLLLVLNVSSRALPPVADSTNIAARLTGGGLMQCWDALYELKSCTNEI 60

Query:    48 VIFFLNSQADIGPDCCRVID 67
             V+FFLN +  +G  CC  +D
Sbjct:    61 VLFFLNGETKLGYGCCNAVD 80

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2030136 EC1.1 "AT1G76750" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query:    33 CWNVLMNLKSCSNEIVIFFLNSQADIGPDCCRVI 66
             CW+ LM L+ CS E+++FFLN +  IGP CC  I
Sbjct:    57 CWDSLMQLQHCSGELILFFLNGETYIGPGCCSAI 90

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0048240 "sperm capacitation" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2176080 EC1.5 "AT5G64720" [Arabidopsis thaliana (taxid:3702)]

 Score = 80 (33.2 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
 Identities = 18/42 (42%), Positives = 23/42 (54%)

Query:    33 CWNVLMNLKSCSNEIVIFFLNS--------QADIGPDCCRVI 66
             CWN  + LKSC++EIV FFL+         +  I  DCC  I
Sbjct:    53 CWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAI 94

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005576 "extracellular region" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019340001 SubName- Full=Chromosome chr7 scaffold_20, whole genome shotgun sequence; (135 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	68
pfam05617	67	pfam05617, Prolamin_like, Prolamin-like	3e-05

>gnl|CDD|218659 pfam05617, Prolamin_like, Prolamin-like

 Score = 37.5 bits (87), Expect = 3e-05
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 33 CWNVLMN-LKSCSNEIVIFFLNSQADIGPDCCRVI 66
          CW+     +  C +EI      ++ ++GPDCC+ I
Sbjct: 2  CWSACAVKIPGCVDEIFASIFGNKGNLGPDCCQAI 36

Both DUF784 and DUF1278 members are found to be expressed in the plant embryo sac and are regulated by the Myb98 transcription factor. Computational analysis has revealed that they are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to the typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, both DUF784 and DUF1278 domains only contain six conserved Cys residues that may form three pairs of disulfide bonds. These two domains may have potential functions in lipid transfer or protection during plant embryo sac development and reproduction. This family has been merged with the DUF1278 family. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	68
PLN00213	118	predicted protein; Provisional	99.95
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.23
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	85.81
PLN00214	115	putative protein; Provisional	84.15

>PLN00213 predicted protein; Provisional

Probab=99.95  E-value=1.5e-28  Score=162.84  Aligned_cols=68  Identities=31%  Similarity=0.697  Sum_probs=61.1

Q ss_pred             CchHHHHHHHHHHHHH---hhccc-CC-------C----CCCcChhhhhhhccCCcchHHHHHHHHHhCccc-cCccccc
Q 044654            1 MALKHVFFILALTFLI---MANLQ-MQ-------P----PEMIASTTCWNVLMNLKSCSNEIVIFFLNSQAD-IGPDCCR   64 (68)
Q Consensus         1 Ma~k~~f~lL~v~~ii---~~~lp-~~-------p----~~~~~~~~Cwssl~~v~gC~~EI~~~~~~G~~~-igp~CC~   64 (68)
                      |+||||++||+|+|++   |+|+| ++       |    ++.+|++||||||+++|||+.||++|+++||++ ||++|||
T Consensus         1 m~iknV~~ll~v~cIvvsVna~lpqf~~~fp~~~p~~~~pg~pd~~kCwSSl~~vpGCv~EI~~si~~gkf~~Ig~aCCK   80 (118)
T PLN00213          1 MSIKNVFLLLAVLCIIVSVNAQLPQFPAQLPFLFPFQLIPGLPDITKCFSSVMDIPGCIAEISQSIFTGKFGNLGPACCK   80 (118)
T ss_pred             CchHHHHHHHHHHHHHheeccCCCCCCCCCCCCCCccCCCCCccHHHHHHHHcCCcchHHHHHHHHHhchhcccchHHHH
Confidence            9999999999999999   88875 42       1    334699999999999999999999999999998 9999999


Q ss_pred             cccC
Q 044654           65 VIDH   68 (68)
Q Consensus        65 Ai~~   68 (68)
                      ||++
T Consensus        81 Af~~   84 (118)
T PLN00213         81 AFLD   84 (118)
T ss_pred             HHHh
Confidence            9974

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.23  E-value=2.6e-12  Score=75.73  Aligned_cols=36  Identities=33%  Similarity=0.835  Sum_probs=33.7

Q ss_pred             hhhhhccCCcchHHHHHHHHHhCccc-cCcccccccc
Q 044654           32 TCWNVLMNLKSCSNEIVIFFLNSQAD-IGPDCCRVID   67 (68)
Q Consensus        32 ~Cwssl~~v~gC~~EI~~~~~~G~~~-igp~CC~Ai~   67 (68)
                      |||+++.++++|+.||+.+|++|+.. ||++||+||+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~   37 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAIN   37 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHH
Confidence            69999999999999999999999955 9999999986

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=85.81  E-value=0.69  Score=29.40  Aligned_cols=9  Identities=33%  Similarity=0.515  Sum_probs=6.2

Q ss_pred             CchHHHHHH
Q 044654            1 MALKHVFFI    9 (68)
Q Consensus         1 Ma~k~~f~l    9 (68)
                      ||+|+.+||
T Consensus         1 MaSK~~llL    9 (95)
T PF07172_consen    1 MASKAFLLL    9 (95)
T ss_pred             CchhHHHHH
Confidence            998885443

Some of them may be involved in resistance to environmental stress [].

>PLN00214 putative protein; Provisional

Probab=84.15  E-value=0.88  Score=30.43  Aligned_cols=60  Identities=18%  Similarity=0.447  Sum_probs=35.2

Q ss_pred             hHHHHHHHHHHHHHhhcccCCCCC-CcChhhhhhhccCCcchHHHHHHHHH-hCccccCccccccc
Q 044654            3 LKHVFFILALTFLIMANLQMQPPE-MIASTTCWNVLMNLKSCSNEIVIFFL-NSQADIGPDCCRVI   66 (68)
Q Consensus         3 ~k~~f~lL~v~~ii~~~lp~~p~~-~~~~~~Cwssl~~v~gC~~EI~~~~~-~G~~~igp~CC~Ai   66 (68)
                      +..+|..++++|++-.-+...... ..-...|---+.  +-|..||+..++ ||.  ...+||+-+
T Consensus         8 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~C~~Kmt--~KCa~EI~a~i~~N~t--~s~~CC~~L   69 (115)
T PLN00214          8 ITTLFIVVALVCAFVPVFSVEEAEAKSLWNTCLVKIT--PKCALDIIAVVFENGT--LIDPCCNDL   69 (115)
T ss_pred             hhHHHHHHHHHHhcccccchhhhHHHHHHHHHHhhcc--HhhHHHHHHHHHcCCC--CchHHHHHH
Confidence            346777788888763222221111 111244544333  669999999999 565  578888754

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00