Citrus Sinensis ID: 044696

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Protein Sequence
ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK
Secondary Structure (PSIPRED)
cccHHHHHHccccccEEEEcccccHHHHHHHHHHHHHcccccEEccccccHHHHHcccEEEEEcccHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHcHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccHcccccccEEEEcccccHHHHHHHHHHHHHccccEEEcccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccHHHHHHccHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
aldpdgivsalnpgavyvdttsshpALAREIFKVARerdcwavdapvsggdigardgKLAIFAAGDSAVVQWLTPLFevlgkptfmggagcgqsckIANQIVVGANLLglseglvfadeagldvrkwrdavkggaaGSMAMELYGERmiekdfrpggfaEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVAngdgkfgtqGLVSVIERINGK
Flexible Loop (DISEMBL)
ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK
Low Complexity Region (SEG)
ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYmvkdmgmgvdvveesedervvvLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK
Disordered region (IsUnstruct)
*********ALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE*****
Disordered Region (DISOPRED)
ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN**
Disordered Region (DISEMBL)
ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK
Disordered Region (DISPRO)
***PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN**
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	220	2.2.26 [Sep-21-2011]
Q9C991	299	Probable 3-hydroxyisobuty	yes	no	0.954	0.702	0.610	9e-70
Q949M8	318	Probable 3-hydroxyisobuty	no	no	0.945	0.654	0.591	5e-67
Q9SZE1	334	Probable 3-hydroxyisobuty	no	no	0.963	0.634	0.484	4e-56
O34948	288	Uncharacterized oxidoredu	yes	no	0.931	0.711	0.352	9e-36
P77161	292	2-hydroxy-3-oxopropionate	N/A	no	0.940	0.708	0.396	7e-35
Q0QLF5	301	2-(hydroxymethyl)glutarat	N/A	no	0.963	0.704	0.339	1e-22
O33730	291	Uncharacterized oxidoredu	yes	no	0.959	0.725	0.333	1e-22
P0ABQ2	294	2-hydroxy-3-oxopropionate	N/A	no	0.968	0.724	0.298	7e-22
P0ABQ3	294	2-hydroxy-3-oxopropionate	no	no	0.968	0.724	0.298	7e-22
Q55702	290	Uncharacterized oxidoredu	N/A	no	0.909	0.689	0.294	1e-16

>sp|Q9C991|3HID2_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 2, mitochondrial OS=Arabidopsis thaliana GN=At1g71170 PE=2 SV=1

 Score =  263 bits (671), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 133/218 (61%), Positives = 160/218 (73%), Gaps = 8/218 (3%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L  DG++S L PG V VD TSS P LAREI+  AR RDCWAVDAPVSGGD GAR+GKL I
Sbjct: 88  LGDDGVLSGLKPGGVTVDMTSSKPGLAREIYAEARRRDCWAVDAPVSGGDAGAREGKLTI 147

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
           FA GDS +V+WL P+ + +G   FMGGAG GQSCKI NQI VG+N++GL+EG+VFA++AG
Sbjct: 148 FAGGDSEIVEWLAPVMKTMGIVRFMGGAGSGQSCKIGNQICVGSNMIGLAEGIVFAEKAG 207

Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
           LD  KW +AVK GAAGS  M L+GE M  +D++  GFAEYMVKD+G           E  
Sbjct: 208 LDPVKWLEAVKDGAAGSAVMRLFGEMMAVRDYKATGFAEYMVKDLG--------MAAEAA 259

Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
           + +PG AL KQLF+ MVANGDGK G QG+V VI R+NG
Sbjct: 260 MAMPGTALNKQLFTVMVANGDGKLGFQGVVDVIRRLNG 297

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 3EC: 1

>sp|Q949M8|3HID3_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 3, mitochondrial OS=Arabidopsis thaliana GN=At1g71180 PE=2 SV=1

 Score =  254 bits (648), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 129/218 (59%), Positives = 158/218 (72%), Gaps = 10/218 (4%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L  DG++S L PG V VD TSS P LAREI   AR R+CWAVDAPVSGGD GAR+G L I
Sbjct: 109 LGDDGVLSGLTPGGVTVDMTSSKPGLAREIHAEARRRNCWAVDAPVSGGDAGAREGTLGI 168

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
           FA GDS +V+WL+P+ + +G  T+MG AG GQSCKI NQI   +NL+GL+EG+VFA++AG
Sbjct: 169 FAGGDSEIVEWLSPVMKNIGTVTYMGEAGSGQSCKIGNQIAGASNLVGLAEGIVFAEKAG 228

Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
           LD  KW +AVK GAAGS  M L+GE ++++D+R  GFAEYMVKD+GM  +          
Sbjct: 229 LDTVKWLEAVKDGAAGSAVMRLFGEMIVKRDYRATGFAEYMVKDLGMAAEAAMPG----- 283

Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
                AAL KQLF+ MVANGDGK G QG+VSVI R+NG
Sbjct: 284 -----AALSKQLFTGMVANGDGKLGIQGVVSVIRRLNG 316

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|Q9SZE1|3HID1_ARATH Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial OS=Arabidopsis thaliana GN=At4g29120 PE=2 SV=1

 Score =  217 bits (553), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 106/219 (48%), Positives = 159/219 (72%), Gaps = 7/219 (3%)

Query: 2   LDP-DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
           LDP  G +S L  G V VD T+S P+LA EI K A  ++C+++DAPVSGGD+GA++GKL+
Sbjct: 112 LDPKSGALSGLRQGGVLVDMTTSEPSLAEEIAKAASFKNCFSIDAPVSGGDLGAKNGKLS 171

Query: 61  IFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
           IFA GD   V+ L PLF ++GK  FMG +G GQ  K+ANQI + + +LGL EGL++A +A
Sbjct: 172 IFAGGDETTVKRLDPLFSLMGKVNFMGTSGKGQFAKLANQITIASTMLGLVEGLIYAHKA 231

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
           GLDV+K+ +A+  GAAGS +++LYG+R++++DF PG +  + VKD+G+ ++     E +R
Sbjct: 232 GLDVKKFLEAISTGAAGSKSIDLYGDRILKRDFDPGFYVNHFVKDLGICLN-----ECQR 286

Query: 181 V-VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN 218
           + + LPG AL +QL+ ++ A+G+G  GTQ L+  +ER+N
Sbjct: 287 MGLALPGLALAQQLYLSLKAHGEGDLGTQALLLALERLN 325

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 1

>sp|O34948|YKWC_BACSU Uncharacterized oxidoreductase YkwC OS=Bacillus subtilis (strain 168) GN=ykwC PE=3 SV=1

 Score =  150 bits (378), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 128/210 (60%), Gaps = 5/210 (2%)

Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
           +GI+     GA  +D T+S P+LA++I + A+E+  +A+DAPVSGGDIGA++G LAI   
Sbjct: 80  NGIIENAKEGAYLIDMTTSKPSLAKKIAEAAKEKALFALDAPVSGGDIGAQNGTLAIMVG 139

Query: 65  GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
           G+    +   P+F ++G+   + G AG GQ  K+ NQI + A ++G++E + +A ++GL+
Sbjct: 140 GEKEAFEACMPIFSLMGENIQYQGPAGSGQHTKMCNQIAIAAGMIGVAEAMAYAQKSGLE 199

Query: 124 VRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVV 183
                 ++  GAAGS ++     RM++ +F PG + ++ +KDMG+ ++  E   +E    
Sbjct: 200 PENVLKSITTGAAGSWSLSNLAPRMLQGNFEPGFYVKHFIKDMGIALEEAELMGEE---- 255

Query: 184 LPGAALGKQLFSAMVANGDGKFGTQGLVSV 213
           +PG +L K L+  + A G+   GTQ +  +
Sbjct: 256 MPGLSLAKSLYDKLAAQGEENSGTQSIYKL 285

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|P77161|GLXR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=glxR PE=2 SV=1

 Score =  147 bits (370), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 84/212 (39%), Positives = 120/212 (56%), Gaps = 5/212 (2%)

Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
           +G   A   G   VD +S  P   +   +   E     +DAPVSGG+IGAR+G L+I   
Sbjct: 77  NGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVG 136

Query: 65  GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
           GD AV + + PLFE+LGK  T +GG G GQ+CK+ANQI+V  N+  +SE L+FA +AG D
Sbjct: 137 GDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGAD 196

Query: 124 VRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVV 183
             + R A+ GG A S  +E++GERMI++ F PG       KD+ + +    +S     + 
Sbjct: 197 PVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLAL----QSAKALALN 252

Query: 184 LPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215
           LP  A  ++LF+   ANG  +     LV  +E
Sbjct: 253 LPNTATCQELFNTCAANGGSQLDHSALVQALE 284

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 0

>sp|Q0QLF5|HMGD_EUBBA 2-(hydroxymethyl)glutarate dehydrogenase OS=Eubacterium barkeri GN=Hgd PE=1 SV=1

 Score =  106 bits (265), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/218 (33%), Positives = 111/218 (50%), Gaps = 6/218 (2%)

Query: 4   PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA 63
           P G++SA   G V VD +S  P+   ++ KVA E+    VDAPVSGG  GA  G L I  
Sbjct: 81  PGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMV 140

Query: 64  AGDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGL 122
               AV + + P+  V+GK  + +G  G G + KI N +++G N+  L+E LV   + GL
Sbjct: 141 GASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGL 200

Query: 123 DVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFA-EYMVKDMGMGVDVVEESEDERV 181
                ++ +   +  S AME   E+ I      GGFA +   KD+G+ +    E+  E  
Sbjct: 201 KPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQHKDLGLAL----EAGKEGN 256

Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
           V LP  A+  Q+F    A G G+     ++ V E++ G
Sbjct: 257 VPLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQMTG 294

Catalyzes the conversion of 2-formylglutarate to (S)-2-hydroxymethylglutarate. Has very low activity with (S)-3-hydroxyisobutyrate.

Eubacterium barkeri (taxid: 1528)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 1

>sp|O33730|Y1503_SHEFN Uncharacterized oxidoreductase Sfri_1503 OS=Shewanella frigidimarina (strain NCIMB 400) GN=Sfri_1503 PE=3 SV=2

 Score =  106 bits (264), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 5/216 (2%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L   GIV  ++ GA+ VD T++   +AREI       +   +DAPVSGG  GA +G L +
Sbjct: 77  LGEHGIVHGMHAGAILVDHTTASADVAREIAAYIEPLNIAFLDAPVSGGQAGAENGALTV 136

Query: 62  FAAGDSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
              GD A    + P+     +    +G  G GQ  K+ NQI +   + GL+EGL FA  A
Sbjct: 137 MMGGDQAHFDTVKPVISAYSRCAELLGPVGAGQLTKMVNQICIAGVVQGLAEGLHFAKSA 196

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
           GLD  K  + +  GAA S  ME   + M +  +  G   ++M KD+G+ +D    +    
Sbjct: 197 GLDGLKVIEVISKGAAQSWQMENRYKTMWQGQYDFGFAIDWMRKDLGIALDEARRNGSH- 255

Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIER 216
              LP AAL  Q +S + A    ++ T  L++ +E+
Sbjct: 256 ---LPVAALVDQFYSEVQAMKGNRWDTSSLLARLEK 288

Shewanella frigidimarina (strain NCIMB 400) (taxid: 318167)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|P0ABQ2|GARR_ECOLI 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) GN=garR PE=1 SV=1

 Score =  103 bits (258), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 5/218 (2%)

Query: 1   ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
           AL  +GI+    PG V +D +S  P  +REI +  + +    +DAPVSGG+  A DG L+
Sbjct: 74  ALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLS 133

Query: 61  IFAAGDSAVVQWLTPLFEVL-GKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
           +   GD A+      L + + G     G  G G   K+ANQ++V  N+  +SE L  A +
Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK 193

Query: 120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDE 179
           AG++      A++GG AGS  ++     +++++F+PG   +  +KD+   +D       +
Sbjct: 194 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ 253

Query: 180 RVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI 217
               LP  A   ++  A+ A+G G      L    E++
Sbjct: 254 ----LPLTAAVMEMMQALRADGLGTADHSALACYYEKL 287

Escherichia coli (strain K12) (taxid: 83333)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 0

>sp|P0ABQ3|GARR_ECOL6 2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=garR PE=3 SV=1

 Score =  103 bits (258), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 109/218 (50%), Gaps = 5/218 (2%)

Query: 1   ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
           AL  +GI+    PG V +D +S  P  +REI +  + +    +DAPVSGG+  A DG L+
Sbjct: 74  ALGENGIIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLS 133

Query: 61  IFAAGDSAVVQWLTPLFEVL-GKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
           +   GD A+      L + + G     G  G G   K+ANQ++V  N+  +SE L  A +
Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATK 193

Query: 120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDE 179
           AG++      A++GG AGS  ++     +++++F+PG   +  +KD+   +D       +
Sbjct: 194 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQ 253

Query: 180 RVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI 217
               LP  A   ++  A+ A+G G      L    E++
Sbjct: 254 ----LPLTAAVMEMMQALRADGLGTADHSALACYYEKL 287

Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) (taxid: 199310)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 6

EC: 0

>sp|Q55702|Y229_SYNY3 Uncharacterized oxidoreductase slr0229 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr0229 PE=3 SV=1

 Score = 86.7 bits (213), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 107/207 (51%), Gaps = 7/207 (3%)

Query: 6   GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
           GI     P A+ +D ++     A E+    + +    +DAPV+GGD+GA +G L I   G
Sbjct: 84  GIAEYAKPQALIIDCSTIGKTAAYELATNLKLQGLRFLDAPVTGGDVGAINGTLTIMVGG 143

Query: 66  DSAVVQWLTPLFEVLG-KPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
           D +  +   P+ + +G K    G +G GQ+ K+ NQ++ G + +  +E +  +++ G+  
Sbjct: 144 DISDFEEALPVLKSIGEKIVHCGPSGSGQAVKLCNQVLCGIHAIAAAEAIQLSEQLGIAP 203

Query: 125 RKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVL 184
               D    GAAGS A+     +M E DF PG   ++++KD+ +   V E +E+     L
Sbjct: 204 ELVIDTCGSGAAGSWALTNLAPKMSEADFAPGFMVKHLLKDLRL---VREAAENGP---L 257

Query: 185 PGAALGKQLFSAMVANGDGKFGTQGLV 211
           PG  L + LF+++   G    G+Q ++
Sbjct: 258 PGVTLAESLFTSVQLLGGEDQGSQAII 284

Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
449464504	306	PREDICTED: uncharacterized oxidoreductas	0.995	0.715	0.789	2e-94
359485993	375	PREDICTED: uncharacterized oxidoreductas	0.990	0.581	0.735	8e-92
224058963	307	predicted protein [Populus trichocarpa]	0.977	0.700	0.767	5e-91
255576788	308	3-hydroxyisobutyrate dehydrogenase, puta	0.972	0.694	0.752	2e-87
356512612	309	PREDICTED: uncharacterized oxidoreductas	0.968	0.689	0.723	2e-87
357519377	372	6-phosphogluconate dehydrogenase NAD-bin	0.990	0.586	0.689	9e-85
449497683	282	PREDICTED: uncharacterized oxidoreductas	0.854	0.666	0.755	4e-76
298204534	275	unnamed protein product [Vitis vinifera]	0.836	0.669	0.607	4e-71
297838943	299	6-phosphogluconate dehydrogenase NAD-bin	0.954	0.702	0.610	1e-69
30698779	299	6-phosphogluconate dehydrogenase-like pr	0.954	0.702	0.610	5e-68

>gi|449464504|ref|XP_004149969.1| PREDICTED: uncharacterized oxidoreductase YkwC-like [Cucumis sativus]

 Score =  350 bits (898), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 173/219 (78%), Positives = 191/219 (87%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           LD +GI+  LNPG V VDTTSSHPALAR+IF  AR + CWAVDAPVSGGDIGARDGKLAI
Sbjct: 88  LDENGILQGLNPGGVVVDTTSSHPALARDIFIAARAKGCWAVDAPVSGGDIGARDGKLAI 147

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
           F  GD  VV WL PLFEVLGK T++G AGCGQSCKIANQ  + ANLLGLSEGLVFA+ AG
Sbjct: 148 FGGGDEGVVNWLLPLFEVLGKVTYVGEAGCGQSCKIANQFPISANLLGLSEGLVFAERAG 207

Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
           LD++K+ +AV+GG A SMAMEL+GERMI +DFRPGGFAEYMVKD+GMGVDVVEE EDERV
Sbjct: 208 LDMKKFVEAVRGGGAWSMAMELFGERMIGRDFRPGGFAEYMVKDLGMGVDVVEEGEDERV 267

Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK 220
           VVLPGAAL KQLFSAMVANGDGKFG QGL+SVIER+NGK
Sbjct: 268 VVLPGAALTKQLFSAMVANGDGKFGNQGLISVIERLNGK 306

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359485993|ref|XP_002270228.2| PREDICTED: uncharacterized oxidoreductase ykwC-like [Vitis vinifera]

 Score =  342 bits (876), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 161/219 (73%), Positives = 190/219 (86%), Gaps = 1/219 (0%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L P+GI+S LNPG V VDTTSSHP LAREI+  ARE++CW+VD+PVSGGDIGARDGKLAI
Sbjct: 154 LGPNGILSGLNPGGVLVDTTSSHPGLAREIYAAAREKNCWSVDSPVSGGDIGARDGKLAI 213

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
            A GDS VV+WLTPL+ V+GK T++G  GCG SCKIANQ++V AN+LGLSEGLVFA+ AG
Sbjct: 214 LAGGDSGVVEWLTPLYNVMGKGTYVGAPGCGMSCKIANQMIVAANMLGLSEGLVFAERAG 273

Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
           LD ++W DAV+GGAAGS AMEL+G RMIE+DFRPGG+AEYMVKD+GMGVD+VEE +DERV
Sbjct: 274 LDKQQWMDAVRGGAAGSKAMELFGGRMIERDFRPGGYAEYMVKDLGMGVDIVEE-DDERV 332

Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK 220
            VLPGAAL KQLF  MVANGDGK G QG +SVIE++NG+
Sbjct: 333 AVLPGAALNKQLFEVMVANGDGKLGAQGFISVIEKMNGR 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058963|ref|XP_002299666.1| predicted protein [Populus trichocarpa] gi|222846924|gb|EEE84471.1| predicted protein [Populus trichocarpa]

 Score =  339 bits (870), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 165/215 (76%), Positives = 189/215 (87%)

Query: 6   GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
           GI++ LNPG V VD+T+S PA AREIF+ A+ + C ++D+PVSGGDIGARDGKLAIFA G
Sbjct: 93  GILAGLNPGGVIVDSTTSSPAQAREIFQAAKAKGCHSIDSPVSGGDIGARDGKLAIFAGG 152

Query: 66  DSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVR 125
           D  VV WL+PL+EVLGK T+MG AGCGQSCKIANQIVVGANLLGLSEGLVFAD+AGLD R
Sbjct: 153 DQVVVNWLSPLYEVLGKVTYMGQAGCGQSCKIANQIVVGANLLGLSEGLVFADKAGLDAR 212

Query: 126 KWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLP 185
           K+ DAV+ GAAGSM MEL+G RMI++DF+ GGFAEYMVKDMGMGVDVVEESEDERV VLP
Sbjct: 213 KFLDAVRTGAAGSMVMELFGGRMIDRDFKAGGFAEYMVKDMGMGVDVVEESEDERVPVLP 272

Query: 186 GAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK 220
           GAALGKQLF+ MVANGDG  GTQ L++VIER+NGK
Sbjct: 273 GAALGKQLFAGMVANGDGNLGTQALITVIERLNGK 307

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255576788|ref|XP_002529281.1| 3-hydroxyisobutyrate dehydrogenase, putative [Ricinus communis] gi|223531270|gb|EEF33113.1| 3-hydroxyisobutyrate dehydrogenase, putative [Ricinus communis]

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 161/214 (75%), Positives = 181/214 (84%)

Query: 7   IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGD 66
           I+  L+ G V +D TSSHPALAREIF  ARE+ CWAVD+PVSGGDIGARDGKLAIF  GD
Sbjct: 95  ILDGLHHGGVIIDFTSSHPALAREIFASAREKGCWAVDSPVSGGDIGARDGKLAIFGGGD 154

Query: 67  SAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRK 126
             V+ WL P+FEVLGK T+MG  G GQSCKIANQIVVGANLLGLSEGLVFA++ GLDV++
Sbjct: 155 EIVINWLLPIFEVLGKVTYMGPPGRGQSCKIANQIVVGANLLGLSEGLVFAEKVGLDVKQ 214

Query: 127 WRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPG 186
           W D+V+GGAAGSM MEL+GERMI +DFRPGGFAEYMVKDMGM VDVVEESED  V VL G
Sbjct: 215 WMDSVRGGAAGSMVMELFGERMIGRDFRPGGFAEYMVKDMGMAVDVVEESEDGSVPVLLG 274

Query: 187 AALGKQLFSAMVANGDGKFGTQGLVSVIERINGK 220
           AAL KQLF+ MV NGDG  GTQGL++VIER+NGK
Sbjct: 275 AALCKQLFAGMVGNGDGHLGTQGLITVIERLNGK 308

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512612|ref|XP_003525012.1| PREDICTED: uncharacterized oxidoreductase ykwC-like [Glycine max]

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 154/213 (72%), Positives = 185/213 (86%)

Query: 7   IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGD 66
           ++S+L P +V VDTTSSHP LAR+IF  AR  D W+VDAPVSGGDIGARDGKLAI AAG+
Sbjct: 94  VLSSLRPNSVVVDTTSSHPDLARQIFSAARSLDAWSVDAPVSGGDIGARDGKLAILAAGE 153

Query: 67  SAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRK 126
            AVV+WL+PLF +LG+ T+MG AGCGQSCKIANQI +GANL+GLSEGLVFA  AGLD+R+
Sbjct: 154 KAVVEWLSPLFSILGRATYMGPAGCGQSCKIANQITIGANLIGLSEGLVFAKRAGLDLRE 213

Query: 127 WRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPG 186
           + +A+K GAAGS A+EL+GERMIE+DFRPGGFAEY VKD+GMGVDVVE  +D  +VVLPG
Sbjct: 214 FVEAIKDGAAGSKALELFGERMIERDFRPGGFAEYQVKDLGMGVDVVEGGDDAHLVVLPG 273

Query: 187 AALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
           A+L KQLFS+M+ANG GK G+QG++SVIERING
Sbjct: 274 ASLSKQLFSSMLANGQGKLGSQGIISVIERING 306

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357519377|ref|XP_003629977.1| 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Medicago truncatula] gi|355523999|gb|AET04453.1| 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Medicago truncatula]

 Score =  318 bits (815), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 151/219 (68%), Positives = 187/219 (85%), Gaps = 1/219 (0%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           LD +G+VS+LNP  V VDTTSSHP LA+EI   AR +  W++DAPVSGGDIGARDGKLAI
Sbjct: 90  LDKNGVVSSLNPNTVTVDTTSSHPDLAKEISVAARAKSAWSIDAPVSGGDIGARDGKLAI 149

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
           FAAG++AVV+WL PLFE++GK T++G AGCGQSCKIANQI +GANL+GLSEGLVFA  +G
Sbjct: 150 FAAGEAAVVEWLQPLFEIMGKATYLGPAGCGQSCKIANQITIGANLIGLSEGLVFAKRSG 209

Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
           +D+ ++ DA+K GAAG+ A+EL+G+RMI KDFRPGG+AEY VKD+GMGV+ VE  +DE V
Sbjct: 210 IDLEQFLDAIKNGAAGTKALELFGKRMINKDFRPGGYAEYQVKDLGMGVNFVEGDDDE-V 268

Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK 220
           VVLPGA+L KQ+F+ MVANGDGK G QG++SVI+RING 
Sbjct: 269 VVLPGASLVKQIFTGMVANGDGKLGGQGVISVIDRINGS 307

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449497683|ref|XP_004160476.1| PREDICTED: uncharacterized oxidoreductase YkwC-like [Cucumis sativus]

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 142/188 (75%), Positives = 160/188 (85%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           LD +GI+  LNPG V VDT SSHPALAR+IF  AR + CWAVDAPVSGGDIGARDGKLAI
Sbjct: 88  LDENGILQGLNPGGVVVDTNSSHPALARDIFTAARAKGCWAVDAPVSGGDIGARDGKLAI 147

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
           F  GD  VV WL PLFEVLGK T++G AGCGQSCKIANQ  + ANLLGLSEGLVFA+ AG
Sbjct: 148 FGGGDEGVVNWLLPLFEVLGKVTYVGEAGCGQSCKIANQFAISANLLGLSEGLVFAERAG 207

Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
           LD++K+ +AV+GG A SMAMEL+GERMI +DFRPGGFAEYMVKD+G+GVDVVEE +DERV
Sbjct: 208 LDMKKFVEAVRGGGAWSMAMELFGERMIGRDFRPGGFAEYMVKDLGIGVDVVEEGDDERV 267

Query: 182 VVLPGAAL 189
           VVLPGA L
Sbjct: 268 VVLPGAPL 275

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|298204534|emb|CBI23809.3| unnamed protein product [Vitis vinifera]

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 133/219 (60%), Positives = 160/219 (73%), Gaps = 35/219 (15%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L P+GI+S LNPG V VDTTSSHP LAREI+  ARE++CW+VD+PVSGGDIGARDGKLAI
Sbjct: 88  LGPNGILSGLNPGGVLVDTTSSHPGLAREIYAAAREKNCWSVDSPVSGGDIGARDGKLAI 147

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
            A GDS VV+WLTPL+ V+GK T++G  GCG SCKIANQ++V AN+LGLSEGLVFA+ AG
Sbjct: 148 LAGGDSGVVEWLTPLYNVMGKGTYVGAPGCGMSCKIANQMIVAANMLGLSEGLVFAERAG 207

Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
           LD ++W DAV+GGAAGS AMEL+G RMIE+DFRPGG+AEYMVKD+GMG            
Sbjct: 208 LDKQQWMDAVRGGAAGSKAMELFGGRMIERDFRPGGYAEYMVKDLGMG------------ 255

Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK 220
                                   G QG +SVIE++NG+
Sbjct: 256 -----------------------LGAQGFISVIEKMNGR 271

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297838943|ref|XP_002887353.1| 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297333194|gb|EFH63612.1| 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Arabidopsis lyrata subsp. lyrata]

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 133/218 (61%), Positives = 161/218 (73%), Gaps = 8/218 (3%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L  DG+++ L PG V VD TSS P LAREI   AR R+CWAVDAPVSGGD GAR+G+L I
Sbjct: 88  LGDDGVLAGLKPGGVTVDMTSSKPGLAREIHAEARRRNCWAVDAPVSGGDAGAREGRLTI 147

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
           FA GDS +V+WL+P+ + +G   +MG AG GQSCKI NQI VG+N++GL+EG+VFA++AG
Sbjct: 148 FAGGDSEIVEWLSPVMKTMGIVRYMGEAGSGQSCKIGNQICVGSNMVGLAEGIVFAEKAG 207

Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
           LD  KW DAVK GAAGS  M L+G  M E+D++  GFAEYMVKD+GM  D          
Sbjct: 208 LDPVKWLDAVKDGAAGSAVMRLFGGMMTERDYKATGFAEYMVKDLGMAADA--------A 259

Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
             +PG AL KQLFSAMVANGDGK G QG+VSVI R+NG
Sbjct: 260 TAMPGTALNKQLFSAMVANGDGKLGFQGVVSVIRRLNG 297

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30698779|ref|NP_565013.2| 6-phosphogluconate dehydrogenase-like protein [Arabidopsis thaliana] gi|75262226|sp|Q9C991.1|3HID2_ARATH RecName: Full=Probable 3-hydroxyisobutyrate dehydrogenase-like 2, mitochondrial; Short=HIBADH-like gi|12323434|gb|AAG51697.1|AC016972_16 putative dehydrogenase; 55429-56328 [Arabidopsis thaliana] gi|110738172|dbj|BAF01017.1| dehydrogenase like protein [Arabidopsis thaliana] gi|332197047|gb|AEE35168.1| 6-phosphogluconate dehydrogenase-like protein [Arabidopsis thaliana]

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 133/218 (61%), Positives = 160/218 (73%), Gaps = 8/218 (3%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L  DG++S L PG V VD TSS P LAREI+  AR RDCWAVDAPVSGGD GAR+GKL I
Sbjct: 88  LGDDGVLSGLKPGGVTVDMTSSKPGLAREIYAEARRRDCWAVDAPVSGGDAGAREGKLTI 147

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
           FA GDS +V+WL P+ + +G   FMGGAG GQSCKI NQI VG+N++GL+EG+VFA++AG
Sbjct: 148 FAGGDSEIVEWLAPVMKTMGIVRFMGGAGSGQSCKIGNQICVGSNMIGLAEGIVFAEKAG 207

Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
           LD  KW +AVK GAAGS  M L+GE M  +D++  GFAEYMVKD+G           E  
Sbjct: 208 LDPVKWLEAVKDGAAGSAVMRLFGEMMAVRDYKATGFAEYMVKDLG--------MAAEAA 259

Query: 182 VVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
           + +PG AL KQLF+ MVANGDGK G QG+V VI R+NG
Sbjct: 260 MAMPGTALNKQLFTVMVANGDGKLGFQGVVDVIRRLNG 297

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
TAIR|locus:2026341	299	AT1G71170 [Arabidopsis thalian	0.954	0.702	0.582	2e-63
TAIR|locus:2026351	318	AT1G71180 [Arabidopsis thalian	0.945	0.654	0.573	1.3e-61
TAIR|locus:2119921	334	AT4G29120 [Arabidopsis thalian	0.968	0.637	0.458	3.7e-48
UNIPROTKB|P77161	292	glxR [Escherichia coli K-12 (t	0.940	0.708	0.382	2.9e-32
UNIPROTKB|Q9KNF7	315	VC_A0007 "3-hydroxyisobutyrate	0.695	0.485	0.419	7.6e-25
TIGR_CMR|VC_A0007	315	VC_A0007 "2-hydroxy-3-oxopropi	0.695	0.485	0.419	7.6e-25
TIGR_CMR|CPS_2007	287	CPS_2007 "3-hydroxyisobutyrate	0.718	0.550	0.381	1.3e-22
UNIPROTKB|Q5LVB0	290	SPO0792 "6-phosphogluconate de	0.959	0.727	0.314	2.6e-22
TIGR_CMR|SPO_0792	290	SPO_0792 "6-phosphogluconate d	0.959	0.727	0.314	2.6e-22
UNIPROTKB|Q0QLF5	301	Hgd "2-(hydroxymethyl)glutarat	0.963	0.704	0.321	4.3e-22

TAIR|locus:2026341 AT1G71170 [Arabidopsis thaliana (taxid:3702)]

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 127/218 (58%), Positives = 152/218 (69%)

Query:     2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
             L  DG++S L PG V VD TSS P LAREI+  AR RDCWAVDAPVSGGD GAR+GKL I
Sbjct:    88 LGDDGVLSGLKPGGVTVDMTSSKPGLAREIYAEARRRDCWAVDAPVSGGDAGAREGKLTI 147

Query:    62 FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
             FA GDS +V+WL P+ + +G   FMGGAG GQSCKI NQI VG+N++GL+EG+VFA++AG
Sbjct:   148 FAGGDSEIVEWLAPVMKTMGIVRFMGGAGSGQSCKIGNQICVGSNMIGLAEGIVFAEKAG 207

Query:   122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYXXXXXXXXXXXXXXXXXXXX 181
             LD  KW +AVK GAAGS  M L+GE M  +D++  GFAEY                    
Sbjct:   208 LDPVKWLEAVKDGAAGSAVMRLFGEMMAVRDYKATGFAEYMVKDLGMAAEAAMA------ 261

Query:   182 XXLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
               +PG AL KQLF+ MVANGDGK G QG+V VI R+NG
Sbjct:   262 --MPGTALNKQLFTVMVANGDGKLGFQGVVDVIRRLNG 297

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA;ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0006098 "pentose-phosphate shunt" evidence=IEA;ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2026351 AT1G71180 [Arabidopsis thaliana (taxid:3702)]

 Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
 Identities = 125/218 (57%), Positives = 153/218 (70%)

Query:     2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
             L  DG++S L PG V VD TSS P LAREI   AR R+CWAVDAPVSGGD GAR+G L I
Sbjct:   109 LGDDGVLSGLTPGGVTVDMTSSKPGLAREIHAEARRRNCWAVDAPVSGGDAGAREGTLGI 168

Query:    62 FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
             FA GDS +V+WL+P+ + +G  T+MG AG GQSCKI NQI   +NL+GL+EG+VFA++AG
Sbjct:   169 FAGGDSEIVEWLSPVMKNIGTVTYMGEAGSGQSCKIGNQIAGASNLVGLAEGIVFAEKAG 228

Query:   122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYXXXXXXXXXXXXXXXXXXXX 181
             LD  KW +AVK GAAGS  M L+GE ++++D+R  GFAEY                    
Sbjct:   229 LDTVKWLEAVKDGAAGSAVMRLFGEMIVKRDYRATGFAEYMVKDLGMAAEAA-------- 280

Query:   182 XXLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
               +PGAAL KQLF+ MVANGDGK G QG+VSVI R+NG
Sbjct:   281 --MPGAALSKQLFTGMVANGDGKLGIQGVVSVIRRLNG 316

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA;ISS

GO:0005634 "nucleus" evidence=ISM

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2119921 AT4G29120 [Arabidopsis thaliana (taxid:3702)]

 Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
 Identities = 100/218 (45%), Positives = 146/218 (66%)

Query:     2 LDP-DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
             LDP  G +S L  G V VD T+S P+LA EI K A  ++C+++DAPVSGGD+GA++GKL+
Sbjct:   112 LDPKSGALSGLRQGGVLVDMTTSEPSLAEEIAKAASFKNCFSIDAPVSGGDLGAKNGKLS 171

Query:    61 IFAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
             IFA GD   V+ L PLF ++GK  FMG +G GQ  K+ANQI + + +LGL EGL++A +A
Sbjct:   172 IFAGGDETTVKRLDPLFSLMGKVNFMGTSGKGQFAKLANQITIASTMLGLVEGLIYAHKA 231

Query:   121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYXXXXXXXXXXXXXXXXXXX 180
             GLDV+K+ +A+  GAAGS +++LYG+R++++DF PG +  +                   
Sbjct:   232 GLDVKKFLEAISTGAAGSKSIDLYGDRILKRDFDPGFYVNHFVKDLGICLNECQRMGLA- 290

Query:   181 XXXLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN 218
                LPG AL +QL+ ++ A+G+G  GTQ L+  +ER+N
Sbjct:   291 ---LPGLALAQQLYLSLKAHGEGDLGTQALLLALERLN 325

GO:0000166 "nucleotide binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=ISS

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0050662 "coenzyme binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

UNIPROTKB|P77161 glxR [Escherichia coli K-12 (taxid:83333)]

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 81/212 (38%), Positives = 113/212 (53%)

Query:     5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
             +G   A   G   VD +S  P   +   +   E     +DAPVSGG+IGAR+G L+I   
Sbjct:    77 NGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVG 136

Query:    65 GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
             GD AV + + PLFE+LGK  T +GG G GQ+CK+ANQI+V  N+  +SE L+FA +AG D
Sbjct:   137 GDEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGAD 196

Query:   124 VRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYXXXXXXXXXXXXXXXXXXXXXX 183
               + R A+ GG A S  +E++GERMI++ F PG    +                      
Sbjct:   197 PVRVRQALMGGFASSRILEVHGERMIKRTFNPG----FKIALHQKDLNLALQSAKALALN 252

Query:   184 LPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215
             LP  A  ++LF+   ANG  +     LV  +E
Sbjct:   253 LPNTATCQELFNTCAANGGSQLDHSALVQALE 284

GO:0006974 "response to DNA damage stimulus" evidence=IEP

GO:0050662 "coenzyme binding" evidence=IEA

GO:0008442 "3-hydroxyisobutyrate dehydrogenase activity" evidence=IEA

GO:0006573 "valine metabolic process" evidence=IEA

GO:0006098 "pentose-phosphate shunt" evidence=IEA

GO:0004616 "phosphogluconate dehydrogenase (decarboxylating) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0046296 "glycolate catabolic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008679 "2-hydroxy-3-oxopropionate reductase activity" evidence=IEA;IDA

GO:0009436 "glyoxylate catabolic process" evidence=IMP

GO:0009442 "allantoin assimilation pathway" evidence=IEP

UNIPROTKB|Q9KNF7 VC_A0007 "3-hydroxyisobutyrate dehydrogenase, putative" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 65/155 (41%), Positives = 89/155 (57%)

Query:     6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
             G + A+ PGAV +D T++   LA E+   A++     +DAPVSGG  GA +G L I   G
Sbjct:   104 GAIPAMKPGAVLIDHTTTSALLAEELSAAAQQAGLHFMDAPVSGGQAGAENGVLTIMCGG 163

Query:    66 DSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
             D A+   + P+F   G+ +  MG AG GQ  K+ NQI +   L GLSEGL+ A++AGLD+
Sbjct:   164 DEALFAKMQPIFAAYGRSSVLMGTAGQGQRAKMVNQICIAGVLNGLSEGLMLAEQAGLDI 223

Query:   125 RKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFA 159
                   +K GAAGS  ME     M ++ F   GFA
Sbjct:   224 PNLVACLKNGAAGSWQMENRALTMSQEKF-DFGFA 257

GO:0008679 "2-hydroxy-3-oxopropionate reductase activity" evidence=ISS

GO:0019582 "D-galactarate catabolic process" evidence=ISS

TIGR_CMR|VC_A0007 VC_A0007 "2-hydroxy-3-oxopropionate reductase" [Vibrio cholerae O1 biovar El Tor (taxid:686)]

 Score = 283 (104.7 bits), Expect = 7.6e-25, P = 7.6e-25
 Identities = 65/155 (41%), Positives = 89/155 (57%)

Query:     6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
             G + A+ PGAV +D T++   LA E+   A++     +DAPVSGG  GA +G L I   G
Sbjct:   104 GAIPAMKPGAVLIDHTTTSALLAEELSAAAQQAGLHFMDAPVSGGQAGAENGVLTIMCGG 163

Query:    66 DSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
             D A+   + P+F   G+ +  MG AG GQ  K+ NQI +   L GLSEGL+ A++AGLD+
Sbjct:   164 DEALFAKMQPIFAAYGRSSVLMGTAGQGQRAKMVNQICIAGVLNGLSEGLMLAEQAGLDI 223

Query:   125 RKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFA 159
                   +K GAAGS  ME     M ++ F   GFA
Sbjct:   224 PNLVACLKNGAAGSWQMENRALTMSQEKF-DFGFA 257

GO:0008679 "2-hydroxy-3-oxopropionate reductase activity" evidence=ISS

GO:0019582 "D-galactarate catabolic process" evidence=ISS

TIGR_CMR|CPS_2007 CPS_2007 "3-hydroxyisobutyrate dehydrogenase family protein" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 61/160 (38%), Positives = 89/160 (55%)

Query:     1 ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
             +L  +GI + L+ G+++VD T++   LA E+  VA +   + +DAPVSGG  GA +G L 
Sbjct:    75 SLGDEGIFAGLSKGSIFVDHTTASAELAVELAAVADKNGQYFLDAPVSGGQAGAENGVLT 134

Query:    61 IFAAGDSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
             +   GD ++     P+     +    MG  G GQ  K+ NQI     + GL+EGL FA +
Sbjct:   135 VMVGGDESIFAKAEPVMAAFARFSQIMGPVGSGQLAKMVNQICFVNTVQGLAEGLNFAQK 194

Query:   120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFA 159
             AGLD  K  D +  GAAGS  M+  G+ M  ++F   GFA
Sbjct:   195 AGLDTDKLLDTIGKGAAGSWQMDNRGKTMCAREF-DFGFA 233

GO:0008152 "metabolic process" evidence=ISS

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=ISS

UNIPROTKB|Q5LVB0 SPO0792 "6-phosphogluconate dehydrogenase domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 68/216 (31%), Positives = 105/216 (48%)

Query:     4 PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA 63
             PDG ++ +  G+V+VD T+    + RE++  AR+     VDAPVSGG  GA +G L++  
Sbjct:    79 PDGALAGMAAGSVFVDHTTVSAKVTRELYAAARDGGVGFVDAPVSGGQAGAENGVLSVMC 138

Query:    64 AGDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGL 122
              GD A      P+     +    +G +G GQ  K+ NQI +   + GL+E L FA++AGL
Sbjct:   139 GGDQAEYDRAEPVIAAYARICRRIGESGAGQVTKMCNQIAIAGLVQGLAESLHFAEKAGL 198

Query:   123 DVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYXXXXXXXXXXXXXXXXXXXXX 182
             D R   + +  GAAGS  M    E M++ D    GFA                       
Sbjct:   199 DGRAVVEVISQGAAGSWQMANRYETMLD-DHWTHGFA---VDWMRKDLGICLDTANETGA 254

Query:   183 XLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN 218
              LP  AL  Q +  +   G G++ T  L++ + +++
Sbjct:   255 SLPVTALVDQFYKDVQKMGGGRWDTSSLLARLRKLD 290

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SPO_0792 SPO_0792 "6-phosphogluconate dehydrogenase domain protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 259 (96.2 bits), Expect = 2.6e-22, P = 2.6e-22
 Identities = 68/216 (31%), Positives = 105/216 (48%)

Query:     4 PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA 63
             PDG ++ +  G+V+VD T+    + RE++  AR+     VDAPVSGG  GA +G L++  
Sbjct:    79 PDGALAGMAAGSVFVDHTTVSAKVTRELYAAARDGGVGFVDAPVSGGQAGAENGVLSVMC 138

Query:    64 AGDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGL 122
              GD A      P+     +    +G +G GQ  K+ NQI +   + GL+E L FA++AGL
Sbjct:   139 GGDQAEYDRAEPVIAAYARICRRIGESGAGQVTKMCNQIAIAGLVQGLAESLHFAEKAGL 198

Query:   123 DVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYXXXXXXXXXXXXXXXXXXXXX 182
             D R   + +  GAAGS  M    E M++ D    GFA                       
Sbjct:   199 DGRAVVEVISQGAAGSWQMANRYETMLD-DHWTHGFA---VDWMRKDLGICLDTANETGA 254

Query:   183 XLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN 218
              LP  AL  Q +  +   G G++ T  L++ + +++
Sbjct:   255 SLPVTALVDQFYKDVQKMGGGRWDTSSLLARLRKLD 290

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q0QLF5 Hgd "2-(hydroxymethyl)glutarate dehydrogenase" [Eubacterium barkeri (taxid:1528)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 70/218 (32%), Positives = 102/218 (46%)

Query:     4 PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA 63
             P G++SA   G V VD +S  P+   ++ KVA E+    VDAPVSGG  GA  G L I  
Sbjct:    81 PGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMV 140

Query:    64 AGDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGL 122
                 AV + + P+  V+GK  + +G  G G + KI N +++G N+  L+E LV   + GL
Sbjct:   141 GASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGL 200

Query:   123 DVRKWRDAVKGGAAGSMAMELYGERMIEK-DFRPGGFAEYXXXXXXXXXXXXXXXXXXXX 181
                  ++ +   +  S AME   E+ I   DF  GGFA                      
Sbjct:   201 KPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFA-GGFA---MDLQHKDLGLALEAGKEGN 256

Query:   182 XXLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
               LP  A+  Q+F    A G G+     ++ V E++ G
Sbjct:   257 VPLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQMTG 294

GO:0043718 "2-hydroxymethylglutarate dehydrogenase activity" evidence=IDA

GO:0051187 "cofactor catabolic process" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9C991	3HID2_ARATH	1, ., 1, ., 1, ., 3, 1	0.6100	0.9545	0.7023	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00026517001	SubName- Full=Chromosome chr12 scaffold_38, whole genome shotgun sequence; (305 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00000535001	SubName- Full=Chromosome chr2 scaffold_105, whole genome shotgun sequence; (351 aa)	•					•			0.408

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	220
COG2084	286	COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase	6e-52
TIGR01505	291	TIGR01505, tartro_sem_red, 2-hydroxy-3-oxopropiona	1e-45
PRK15059	292	PRK15059, PRK15059, tartronate semialdehyde reduct	5e-41
PRK11559	296	PRK11559, garR, tartronate semialdehyde reductase;	6e-33
PLN02858	1378	PLN02858, PLN02858, fructose-bisphosphate aldolase	4e-22
pfam03446	163	pfam03446, NAD_binding_2, NAD binding domain of 6-	6e-22
TIGR01692	288	TIGR01692, HIBADH, 3-hydroxyisobutyrate dehydrogen	3e-18
PLN02858	1378	PLN02858, PLN02858, fructose-bisphosphate aldolase	1e-11
PRK15461	296	PRK15461, PRK15461, NADH-dependent gamma-hydroxybu	4e-09
COG1023	300	COG1023, Gnd, Predicted 6-phosphogluconate dehydro	0.004

>gnl|CDD|224995 COG2084, MmsB, 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

 Score =  168 bits (429), Expect = 6e-52
 Identities = 77/215 (35%), Positives = 117/215 (54%), Gaps = 5/215 (2%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
              +G++  L PGA+ +D ++  P  ARE+      +    +DAPVSGG  GA  G L I
Sbjct: 76  FGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVPGAAAGTLTI 135

Query: 62  FAAGDSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
              GD+   +   P+ E +GK    +G  G GQ+ K+AN I++  N+  L+E L  A++A
Sbjct: 136 MVGGDAEAFERAKPVLEAMGKNIVHVGPVGAGQAAKLANNILLAGNIAALAEALALAEKA 195

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
           GLD     + + GGAAGS  +E YG RM+E DF PG   + M+KD+G+ +D  +    E 
Sbjct: 196 GLDPDVVLEVISGGAAGSWILENYGPRMLEGDFSPGFAVDLMLKDLGLALDAAK----EL 251

Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215
              LP  AL  +L++   A G G+     L+ ++E
Sbjct: 252 GAPLPLTALAAELYAKAAAAGGGEEDFSALIKLLE 286

Length = 286

>gnl|CDD|130569 TIGR01505, tartro_sem_red, 2-hydroxy-3-oxopropionate reductase

 Score =  152 bits (386), Expect = 1e-45
 Identities = 88/220 (40%), Positives = 128/220 (58%), Gaps = 5/220 (2%)

Query: 1   ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
           A   +GI+    PG   VD +S  P  ++   K  +E+    +DAPVSGG+IGA +G L+
Sbjct: 73  AFGENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGIDYLDAPVSGGEIGAIEGTLS 132

Query: 61  IFAAGDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
           I   GD AV   + PLFE LGK    +GG G GQ+CK+ANQI+V  N+  +SE LVFA +
Sbjct: 133 IMVGGDQAVFDRVKPLFEALGKNIVLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASK 192

Query: 120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDE 179
           AG+D  + R A++GG AGS  +E+ GER+I++ F+PG   +   KD+ + +D    S   
Sbjct: 193 AGVDPVRVRQALRGGLAGSTVLEVKGERVIDRTFKPGFRIDLHQKDLNLALD----SAKA 248

Query: 180 RVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
               LP  A  ++LF+ + ANG G+     LV  +E +  
Sbjct: 249 VGANLPNTATVQELFNTLRANGGGQLDHSALVQALELLAN 288

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. Length = 291

>gnl|CDD|185019 PRK15059, PRK15059, tartronate semialdehyde reductase; Provisional

 Score =  140 bits (355), Expect = 5e-41
 Identities = 84/211 (39%), Positives = 119/211 (56%), Gaps = 5/211 (2%)

Query: 6   GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
           G   A   G   VD +S  P   +   +   E     +DAPVSGG+IGAR+G L+I   G
Sbjct: 78  GCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGG 137

Query: 66  DSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
           D AV + + PLFE+LGK  T +GG G GQ+CK+ANQI+V  N+  +SE L+FA +AG D 
Sbjct: 138 DEAVFERVKPLFELLGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADP 197

Query: 125 RKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVL 184
            + R A+ GG A S  +E++GERMI++ F PG       KD+ + +    +S     + L
Sbjct: 198 VRVRQALMGGFASSRILEVHGERMIKRTFNPGFKIALHQKDLNLAL----QSAKALALNL 253

Query: 185 PGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215
           P  A  ++LF+   ANG  +     LV  +E
Sbjct: 254 PNTATCQELFNTCAANGGSQLDHSALVQALE 284

Length = 292

>gnl|CDD|183197 PRK11559, garR, tartronate semialdehyde reductase; Provisional

 Score =  119 bits (301), Expect = 6e-33
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 5/220 (2%)

Query: 1   ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
           AL  +GI+    PG V +D +S  P  +REI    + +    +DAPVSGG+  A DG L+
Sbjct: 76  ALGENGIIEGAKPGTVVIDMSSIAPLASREIAAALKAKGIEMLDAPVSGGEPKAIDGTLS 135

Query: 61  IFAAGDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
           +   GD A+      L + +       G  G G   K+ANQ++V  N+  +SE LV A +
Sbjct: 136 VMVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALVLATK 195

Query: 120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDE 179
           AG++      A++GG AGS  ++     +++++F+PG   +  +KD+    + ++ S   
Sbjct: 196 AGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLA---NALDTSHGV 252

Query: 180 RVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
               LP  A   ++  A+ A+G G      L    E++  
Sbjct: 253 G-APLPLTAAVMEMMQALKADGLGTADHSALACYYEKLAK 291

Length = 296

>gnl|CDD|215463 PLN02858, PLN02858, fructose-bisphosphate aldolase

 Score = 93.8 bits (233), Expect = 4e-22
 Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 8/219 (3%)

Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFK--VARERDCWAVDAPVSGGDIGARDGKLAIF 62
            G VSAL  GA  V +++  P    ++ +      RD   VDAPVSGG   A  G L I 
Sbjct: 402 LGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVKRAAMGTLTIM 461

Query: 63  AAGDSAVVQWLTPLFEVLGKPTFM--GGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
           A+G    ++    +   L +  ++  GG G G   K+ NQ++ G ++   +E + F    
Sbjct: 462 ASGTDEALKSAGSVLSALSEKLYVIKGGCGAGSGVKMVNQLLAGVHIASAAEAMAFGARL 521

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
           GL+ RK  D +      S   E     M++ D+ P    +  VKD+G+   V  E    +
Sbjct: 522 GLNTRKLFDIISNAGGTSWMFENRVPHMLDNDYTPYSALDIFVKDLGI---VSREGSSRK 578

Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
            + L  + +  QLF A  A+G G+     +V V E + G
Sbjct: 579 -IPLHLSTVAHQLFLAGSASGWGRIDDAAVVKVYETLTG 616

Length = 1378

>gnl|CDD|217563 pfam03446, NAD_binding_2, NAD binding domain of 6-phosphogluconate dehydrogenase

 Score = 87.5 bits (218), Expect = 6e-22
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L  DG++  L PG + +D ++S P   R   K   E+    +DAPVSGG+ GA  G L+I
Sbjct: 75  LGEDGLLPGLKPGDIIIDGSTSDPDDTRRRAKELAEKGIHFLDAPVSGGEEGAEAGTLSI 134

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTF 85
              GD    + + P+ E +G    
Sbjct: 135 MVGGDEEAFERVKPILEAMGACVT 158

The NAD binding domain of 6-phosphogluconate dehydrogenase adopts a Rossmann fold. Length = 163

>gnl|CDD|130753 TIGR01692, HIBADH, 3-hydroxyisobutyrate dehydrogenase

 Score = 80.6 bits (199), Expect = 3e-18
 Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 12/208 (5%)

Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
           +GI+  +  G++ +D ++  P  AR++ ++A       +DAPVSGG  GAR G L     
Sbjct: 74  EGILPKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMDAPVSGGVGGARAGTLTFMVG 133

Query: 65  GDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
           G +       P+   +G+     G  G GQ+ KI N +++G +++G +E +   ++ GLD
Sbjct: 134 GVAEEFAAAEPVLGPMGRNIVHCGDHGAGQAAKICNNMLLGISMIGTAEAMALGEKLGLD 193

Query: 124 VRKWRDAVKGGAAGSMAMELY------GERMIEKDFRPGGFA-EYMVKDMGMGVDVVEES 176
            +   +     +    + + Y        +    +   GGF    M+KD+G+  D  + +
Sbjct: 194 PKVLFEIANTSSGRCWSSDTYNPVPGVMPQAPASNGYQGGFGTALMLKDLGLAQDAAKSA 253

Query: 177 EDERVVVLPGAALGKQLFSAMVANGDGK 204
                   P  AL +QL+S     G G 
Sbjct: 254 GAP----TPLGALARQLYSLFDDKGHGG 277

3-hydroxyisobutyrate dehydrogenase is an enzyme that catalyzes the NAD+-dependent oxidation of 3-hydroxyisobutyrate to methylmalonate semialdehyde of the valine catabolism pathway. In Pseudomonas aeruginosa, 3-hydroxyisobutyrate dehydrogenase (mmsB) is co-induced with methylmalonate-semialdehyde dehydrogenase (mmsA) when grown on medium containing valine as the sole carbon source. The positive transcriptional regulator of this operon (mmsR) is located upstream of these genes and has been identified as a member of the XylS/AraC family of transcriptional regulators. 3-hydroxyisobutyrate dehydrogenase shares high sequence homology to the characterized 3-hydroxyisobutyrate dehydrogenase from rat liver with conservation of proposed NAD+ binding residues at the N-terminus (G-8,10,13,24 and D-31). This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446) [Energy metabolism, Amino acids and amines]. Length = 288

>gnl|CDD|215463 PLN02858, PLN02858, fructose-bisphosphate aldolase

 Score = 62.9 bits (153), Expect = 1e-11
 Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 8/220 (3%)

Query: 4   PDGIVSALNPGAVYVDTTSSHPALAREIFK--VARERDCWAVDAPVSGGDIGARDGKLAI 61
            +G    L  GAV +  ++  P   +++ K    R+   + VDA VS G     +GKL I
Sbjct: 81  DEGAAKGLQKGAVILIRSTILPLQLQKLEKKLTERKEQIFLVDAYVSKGMSDLLNGKLMI 140

Query: 62  FAAGDSAVVQWLTPLFEVLGKP--TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
            A+G S  +    P    + +   TF G  G G   K+ N+++ G +L+  +E +     
Sbjct: 141 IASGRSDAITRAQPFLSAMCQKLYTFEGEIGAGSKVKMVNELLEGIHLVASAEAMALGVR 200

Query: 120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDE 179
           AG+      D +   A  S   + +   +++ D+  G F   +V+++G    +V +    
Sbjct: 201 AGIHPWIIYDIISNAAGSSWIFKNHVPLLLKDDYIEGRFLNVLVQNLG----IVLDMAKS 256

Query: 180 RVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
               LP  A+  Q   +  ++  G      L  V E++ G
Sbjct: 257 LPFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFG 296

Length = 1378

>gnl|CDD|185358 PRK15461, PRK15461, NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

 Score = 54.9 bits (132), Expect = 4e-09
 Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 8/203 (3%)

Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
           +G+   L+  A+ +D ++ HP    ++    + +    +D PV      A  G L + A 
Sbjct: 79  NGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSDNAITGTLLLLAG 138

Query: 65  GDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCK-IANQIVVGANLLGLSEGLVFADEAGL 122
           G +  V+  TP+   +G      GG G G   K I N + +  N L  +E  V  +  GL
Sbjct: 139 GTAEQVERATPILMAMGNELINAGGPGMGIRVKLINNYMSIALNALS-AEAAVLCEALGL 197

Query: 123 DVRKWRDAVKGGAAGSMAMEL-YGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERV 181
                   + G AAG       +  ++++ D  P    +   KD+G+ +DV  +      
Sbjct: 198 SFDVALKVMSGTAAGKGHFTTTWPNKVLKGDLSPAFMIDLAHKDLGIALDVANQLH---- 253

Query: 182 VVLPGAALGKQLFSAMVANGDGK 204
           V +P  A  ++++S   A G G+
Sbjct: 254 VPMPLGAASREVYSQARAAGRGR 276

Length = 296

>gnl|CDD|223954 COG1023, Gnd, Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

 Score = 37.0 bits (86), Expect = 0.004
 Identities = 45/182 (24%), Positives = 69/182 (37%), Gaps = 18/182 (9%)

Query: 11  LNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVV 70
           L+ G + +D  +S+   +    K+  E+    +D   SGG  GA  G   +   GD   V
Sbjct: 84  LSAGDIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSGGVWGAERG-YCLMIGGDEEAV 142

Query: 71  QWLTPLFEVLGKPTF----MGGAGCGQSCK-IANQIVVGANLLGLSEGLVFADEAGLDV- 124
           + L P+F+ L          G +G G   K + N I  G  +  ++EG      +  D  
Sbjct: 143 ERLEPIFKALAPGEDGYLYCGPSGSGHFVKMVHNGIEYGM-MQAIAEGFELLKNSPFDYD 201

Query: 125 -----RKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDE 179
                  W     G    S  ++L      +KD      +   V D G G   VEE+ D 
Sbjct: 202 LEAVAEVWN---HGSVIRSWLLDL-TAEAFKKDPDLDQISGR-VSDSGEGRWTVEEALDL 256

Query: 180 RV 181
            V
Sbjct: 257 GV 258

Length = 300

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	220
COG2084	286	MmsB 3-hydroxyisobutyrate dehydrogenase and relate	100.0
KOG0409	327	consensus Predicted dehydrogenase [General functio	100.0
PRK15059	292	tartronate semialdehyde reductase; Provisional	100.0
PRK15461	296	NADH-dependent gamma-hydroxybutyrate dehydrogenase	100.0
TIGR01692	288	HIBADH 3-hydroxyisobutyrate dehydrogenase. This en	100.0
PLN02858	1378	fructose-bisphosphate aldolase	100.0
PLN02858	1378	fructose-bisphosphate aldolase	100.0
PRK11559	296	garR tartronate semialdehyde reductase; Provisiona	100.0
TIGR01505	291	tartro_sem_red 2-hydroxy-3-oxopropionate reductase	100.0
PRK12490	299	6-phosphogluconate dehydrogenase-like protein; Rev	100.0
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	100.0
PRK09599	301	6-phosphogluconate dehydrogenase-like protein; Rev	100.0
PRK09287	459	6-phosphogluconate dehydrogenase; Validated	100.0
TIGR00872	298	gnd_rel 6-phosphogluconate dehydrogenase (decarbox	99.98
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	99.97
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	99.97
PF14833	122	NAD_binding_11: NAD-binding of NADP-dependent 3-hy	99.96
TIGR03026	411	NDP-sugDHase nucleotide sugar dehydrogenase. All o	99.93
COG1023	300	Gnd Predicted 6-phosphogluconate dehydrogenase [Ca	99.89
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	99.86
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	99.83
PRK11064	415	wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro	99.83
PRK15182	425	Vi polysaccharide biosynthesis protein TviB; Provi	99.81
PRK06129	308	3-hydroxyacyl-CoA dehydrogenase; Validated	99.76
PRK15057	388	UDP-glucose 6-dehydrogenase; Provisional	99.76
PRK00094	325	gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr	99.75
COG0362	473	Gnd 6-phosphogluconate dehydrogenase [Carbohydrate	99.75
PRK14619	308	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	99.73
PRK12557	342	H(2)-dependent methylenetetrahydromethanopterin de	99.64
KOG2653	487	consensus 6-phosphogluconate dehydrogenase [Carboh	99.6
PRK08229	341	2-dehydropantoate 2-reductase; Provisional	99.52
PRK07679	279	pyrroline-5-carboxylate reductase; Reviewed	99.3
PRK07531	495	bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe	99.24
PRK08268	507	3-hydroxy-acyl-CoA dehydrogenase; Validated	99.12
PLN02353	473	probable UDP-glucose 6-dehydrogenase	99.09
PRK08507	275	prephenate dehydrogenase; Validated	99.02
PRK11199	374	tyrA bifunctional chorismate mutase/prephenate deh	98.94
TIGR02279	503	PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase Pa	98.94
PLN02688	266	pyrroline-5-carboxylate reductase	98.93
PRK08269	314	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.91
COG1004	414	Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en	98.87
COG0677	436	WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenas	98.78
PRK09260	288	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.75
PRK08655	437	prephenate dehydrogenase; Provisional	98.73
PRK07417	279	arogenate dehydrogenase; Reviewed	98.56
PRK06130	311	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.42
PF00984	96	UDPG_MGDP_dh: UDP-glucose/GDP-mannose dehydrogenas	98.33
PLN02545	295	3-hydroxybutyryl-CoA dehydrogenase	98.27
PRK07530	292	3-hydroxybutyryl-CoA dehydrogenase; Validated	98.03
TIGR00873	467	gnd 6-phosphogluconate dehydrogenase, decarboxylat	98.02
PRK06476	258	pyrroline-5-carboxylate reductase; Reviewed	98.0
PRK06035	291	3-hydroxyacyl-CoA dehydrogenase; Validated	97.89
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	97.85
PRK09287	459	6-phosphogluconate dehydrogenase; Validated	97.82
PF00393	291	6PGD: 6-phosphogluconate dehydrogenase, C-terminal	97.82
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	97.67
PTZ00142	470	6-phosphogluconate dehydrogenase; Provisional	97.64
PRK06545	359	prephenate dehydrogenase; Validated	97.6
KOG2666	481	consensus UDP-glucose/GDP-mannose dehydrogenase [C	97.54
PRK07680	273	late competence protein ComER; Validated	97.48
TIGR01724	341	hmd_rel H2-forming N(5),N(10)-methenyltetrahydrome	97.22
PRK11880	267	pyrroline-5-carboxylate reductase; Reviewed	97.19
PRK12921	305	2-dehydropantoate 2-reductase; Provisional	96.7
PRK05808	282	3-hydroxybutyryl-CoA dehydrogenase; Validated	96.51
PF02153	258	PDH: Prephenate dehydrogenase; InterPro: IPR003099	96.09
PLN02712	667	arogenate dehydrogenase	95.95
PRK08293	287	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.45
PLN02350	493	phosphogluconate dehydrogenase (decarboxylating)	95.32
PF00393	291	6PGD: 6-phosphogluconate dehydrogenase, C-terminal	95.31
PF10728	132	DUF2520: Domain of unknown function (DUF2520); Int	95.17
PRK14806	735	bifunctional cyclohexadienyl dehydrogenase/ 3-phos	94.97
PRK14620	326	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	94.85
COG0287	279	TyrA Prephenate dehydrogenase [Amino acid transpor	94.66
PRK12439	341	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	93.99
PTZ00431	260	pyrroline carboxylate reductase; Provisional	93.93
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	92.05
PF09130	73	DUF1932: Domain of unknown function (DUF1932); Int	91.73
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	91.47
PRK06249	313	2-dehydropantoate 2-reductase; Provisional	91.32
PF03721	185	UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen	91.18
COG0345	266	ProC Pyrroline-5-carboxylate reductase [Amino acid	90.32
TIGR01244	135	conserved hypothetical protein TIGR01244. No membe	89.28
PRK07634	245	pyrroline-5-carboxylate reductase; Reviewed	88.43
PRK11861	673	bifunctional prephenate dehydrogenase/3-phosphoshi	88.3
PRK08818	370	prephenate dehydrogenase; Provisional	87.78
COG0362	473	Gnd 6-phosphogluconate dehydrogenase [Carbohydrate	87.25
PRK07066	321	3-hydroxybutyryl-CoA dehydrogenase; Validated	86.47
TIGR00745	293	apbA_panE 2-dehydropantoate 2-reductase. This mode	85.66
TIGR00112	245	proC pyrroline-5-carboxylate reductase. This enzym	85.54
TIGR03376	342	glycerol3P_DH glycerol-3-phosphate dehydrogenase (	84.49
PLN02256	304	arogenate dehydrogenase	83.71
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	83.62
PRK12491	272	pyrroline-5-carboxylate reductase; Reviewed	83.53
COG1893	307	ApbA Ketopantoate reductase [Coenzyme metabolism]	81.3

>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]

Probab=100.00  E-value=1.7e-57  Score=385.89  Aligned_cols=211  Identities=36%  Similarity=0.629  Sum_probs=208.2

Q ss_pred             CCCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696            1 ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVL   80 (220)
Q Consensus         1 ~~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~   80 (220)
                      +||++|+++++++|++||||||++|+++++++++++++|++|||||||||+..|++|+|+||+||++++|++++|+|+.|
T Consensus        75 ~~g~~g~~~~~~~G~i~IDmSTisp~~a~~~a~~~~~~G~~~lDAPVsGg~~~A~~GtLtimvGG~~~~f~r~~pvl~~~  154 (286)
T COG2084          75 LFGENGLLEGLKPGAIVIDMSTISPETARELAAALAAKGLEFLDAPVSGGVPGAAAGTLTIMVGGDAEAFERAKPVLEAM  154 (286)
T ss_pred             HhCccchhhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCcEEecCccCCchhhhhCceEEEeCCCHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchh
Q 044696           81 GK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFA  159 (220)
Q Consensus        81 ~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~  159 (220)
                      |+ ++|+|+.|+|+.+|||||++.++++++++|++.|++|+|+|++.+.++++.+++.||+++++.|+|.+++|+|+|++
T Consensus       155 g~~i~~~G~~G~G~~~Kl~nn~l~~~~~~a~aEAl~la~k~Gld~~~~~~vi~~~~~~s~~~e~~~~~m~~~~~~p~F~v  234 (286)
T COG2084         155 GKNIVHVGPVGAGQAAKLANNILLAGNIAALAEALALAEKAGLDPDVVLEVISGGAAGSWILENYGPRMLEGDFSPGFAV  234 (286)
T ss_pred             cCceEEECCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccccCChHHHhhcchhhcCCCCcchhH
Confidence            99 99999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHH
Q 044696          160 EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE  215 (220)
Q Consensus       160 ~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~  215 (220)
                      +++.||++++++++++.    |+++|+.+.+.++|+.+.+.|+|++|++++++.++
T Consensus       235 ~~~~KDl~la~~~A~~~----g~~lP~~~~~~~ly~~~~~~G~g~~D~sal~~~l~  286 (286)
T COG2084         235 DLMLKDLGLALDAAKEL----GAPLPLTALAAELYAKAAAAGGGEEDFSALIKLLE  286 (286)
T ss_pred             HHHHHHHHHHHHHHHhc----CCCCcHHHHHHHHHHHHHhcCCCccChHHHHHHhC
Confidence            99999999999999999    99999999999999999999999999999999874

>KOG0409 consensus Predicted dehydrogenase [General function prediction only]

Probab=100.00  E-value=9.4e-54  Score=358.65  Aligned_cols=216  Identities=35%  Similarity=0.584  Sum_probs=212.0

Q ss_pred             CCCccchhhcCCCCCEE-EecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696            1 ALDPDGIVSALNPGAVY-VDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEV   79 (220)
Q Consensus         1 ~~g~~gi~~~~~~g~~i-vd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~   79 (220)
                      +||++|+++++++|+.. ||+||++|++++++++.++.+|++||||||+||..+|++|+|+||+|||++.|+++.|+|+.
T Consensus       109 ~~g~~Gvl~g~~~g~~~~vDmSTidp~~s~ei~~~i~~~~~~~vDAPVSGg~~~A~~G~LtimagGde~~~~~~~~~~~~  188 (327)
T KOG0409|consen  109 LLGKSGVLSGIRPGKKATVDMSTIDPDTSLEIAKAISNKGGRFVDAPVSGGVKGAEEGTLTIMAGGDEALFEAASPVFKL  188 (327)
T ss_pred             hcCCCcceeeccCCCceEEeccccCHHHHHHHHHHHHhCCCeEEeccccCCchhhhcCeEEEEecCcHHHHHHHHHHHHH
Confidence            58999999999999988 99999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCch
Q 044696           80 LGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGF  158 (220)
Q Consensus        80 ~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~  158 (220)
                      ||+ ++|+|..|+|+.+|||||+++++++.+++|+++|+++.|+|+.+++|+++.+..+|+.+.++.|.|.+++|.|+|.
T Consensus       189 mGk~~~~~G~~GnG~~~Kl~nnm~~g~~M~g~aEal~la~r~GLd~~~l~eiln~G~~~S~~~~~~~p~m~k~dy~p~f~  268 (327)
T KOG0409|consen  189 MGKNVVFLGGVGNGQAAKLCNNMLLGSSMVGLAEALALADRLGLDAKKLLEILNTGRCWSSMFYNPVPGMLKGDYNPGFA  268 (327)
T ss_pred             hcceEEEecccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCcccHHHhCcCchhhcCCCCCcch
Confidence            999 9999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696          159 AEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK  220 (220)
Q Consensus       159 ~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~  220 (220)
                      ++++.||++++.+++++.    ++|+|+...++|+|+...+.|+|+.|+++|++.+++.+++
T Consensus       269 ~~~m~KDLgla~~~a~~~----~~~~P~~slA~qly~~~~a~G~g~~Dfs~V~~~~~~~~~~  326 (327)
T KOG0409|consen  269 LKLMVKDLGLALNAAESV----KVPMPLGSLAHQLYKSMKALGYGDKDFSAVYRAFRRLNGI  326 (327)
T ss_pred             HHHHHHHHHHHHHhhhcc----CCCCchHHHHHHHHHHHHhcCCCccccHHHHHHHHHhccC
Confidence            999999999999999999    9999999999999999999999999999999999988764

>PRK15059 tartronate semialdehyde reductase; Provisional

Probab=100.00  E-value=2.6e-51  Score=353.03  Aligned_cols=215  Identities=39%  Similarity=0.615  Sum_probs=209.3

Q ss_pred             CCCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696            1 ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVL   80 (220)
Q Consensus         1 ~~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~   80 (220)
                      ++|++|+++++++|++|||+||++|+++++++++++++|++|+|+||+|++..+++|+|++|+||+++++++++|+|+.|
T Consensus        73 ~~~~~g~~~~~~~g~ivvd~sT~~p~~~~~~~~~~~~~G~~~vdaPVsGg~~~a~~g~l~~~~gG~~~~~~~~~p~l~~~  152 (292)
T PRK15059         73 LFGENGCTKASLKGKTIVDMSSISPIETKRFARQVNELGGDYLDAPVSGGEIGAREGTLSIMVGGDEAVFERVKPLFELL  152 (292)
T ss_pred             HcCCcchhccCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEEecCCCCHHHHhcCcEEEEEcCCHHHHHHHHHHHHHH
Confidence            36788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchh
Q 044696           81 GK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFA  159 (220)
Q Consensus        81 ~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~  159 (220)
                      ++ ++|+|+.|+|+++||+||++.++++++++|++.+++++|||+++++++++.+.+.|++++.+.|++.+++|+++|++
T Consensus       153 g~~~~~~G~~G~g~~~Kl~~N~l~~~~~~a~~Ea~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~l  232 (292)
T PRK15059        153 GKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALLFASKAGADPVRVRQALMGGFASSRILEVHGERMIKRTFNPGFKI  232 (292)
T ss_pred             cCCcEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCcccCHHHHhhchhhhcCCCCCCCch
Confidence            99 99999999999999999999999999999999999999999999999999988999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696          160 EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING  219 (220)
Q Consensus       160 ~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~  219 (220)
                      +++.||++++++++++.    |+++|+.+.++++|+.+.+.|+|++|++++++++++..|
T Consensus       233 ~~~~KDl~l~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~D~sa~~~~~~~~~~  288 (292)
T PRK15059        233 ALHQKDLNLALQSAKAL----ALNLPNTATCQELFNTCAANGGSQLDHSALVQALELMAN  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCcCChHHHHHHHHHhcC
Confidence            99999999999999999    999999999999999999999999999999999998765

>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-48  Score=336.93  Aligned_cols=215  Identities=22%  Similarity=0.348  Sum_probs=206.3

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      ++++|+++++++|++|||+||++|.+++++++++.++|++|+||||+|++..++.|++++|+||+++++++++|+|+.||
T Consensus        76 ~~~~~i~~~l~~g~lvid~sT~~p~~~~~l~~~l~~~g~~~ldapV~g~~~~a~~g~l~~~~gg~~~~~~~~~p~l~~~g  155 (296)
T PRK15461         76 FGENGVCEGLSRDALVIDMSTIHPLQTDKLIADMQAKGFSMMDVPVGRTSDNAITGTLLLLAGGTAEQVERATPILMAMG  155 (296)
T ss_pred             cCcccHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEEccCCCCHHHHHhCcEEEEECCCHHHHHHHHHHHHHHc
Confidence            56778999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-hhccccCCCCchh
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-RMIEKDFRPGGFA  159 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~f~~  159 (220)
                      + ++|+|++|+|+++||+||++...++++++|++.+++++|+|++.++++++.++..++.+..+.+ ++.+++|+++|++
T Consensus       156 ~~~~~~g~~G~g~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~Gld~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~f~~  235 (296)
T PRK15461        156 NELINAGGPGMGIRVKLINNYMSIALNALSAEAAVLCEALGLSFDVALKVMSGTAAGKGHFTTTWPNKVLKGDLSPAFMI  235 (296)
T ss_pred             CCeEeeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCcccChHHHccccchhccCCCCCCcch
Confidence            9 9999999999999999999999999999999999999999999999999988877888877765 8999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696          160 EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK  220 (220)
Q Consensus       160 ~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~  220 (220)
                      +++.||++++++++++.    |+|+|+.++++++|+.+.++|+|++|++++++++++..|+
T Consensus       236 ~~~~KD~~l~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~~~  292 (296)
T PRK15461        236 DLAHKDLGIALDVANQL----HVPMPLGAASREVYSQARAAGRGRQDWSAILEQVRVSAGL  292 (296)
T ss_pred             HHHHhhHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHhcCC
Confidence            99999999999999999    9999999999999999999999999999999999887764

>TIGR01692 HIBADH 3-hydroxyisobutyrate dehydrogenase

Probab=100.00  E-value=6.7e-47  Score=325.02  Aligned_cols=209  Identities=24%  Similarity=0.448  Sum_probs=200.3

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      +|++++.+.+++|+++||+||++|++++++++++.++|++|||+||+|++..++.|++.+|+||+++.+++++|+|+.++
T Consensus        71 ~g~~~l~~~~~~g~~vid~st~~p~~~~~~~~~~~~~g~~~vdaPv~Gg~~~a~~g~l~~~~gg~~~~~~~~~~~l~~~g  150 (288)
T TIGR01692        71 SGDEGILPKVAKGSLLIDCSTIDPDSARKLAELAAAHGAVFMDAPVSGGVGGARAGTLTFMVGGVAEEFAAAEPVLGPMG  150 (288)
T ss_pred             cCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCcEEECCCCCCHHHHhhCcEEEEECCCHHHHHHHHHHHHHhc
Confidence            57889999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-------hhccccC
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-------RMIEKDF  153 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~  153 (220)
                      + ++|+|++|+|+++||+||++.++++++++|++.+++++|+|+++++++++.+++.||.+..+.|       .+.+++|
T Consensus       151 ~~~~~~g~~g~g~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  230 (288)
T TIGR01692       151 RNIVHCGDHGAGQAAKICNNMLLGISMIGTAEAMALGEKLGLDPKVLFEIANTSSGRCWSSDTYNPVPGVMPQAPASNGY  230 (288)
T ss_pred             CCeEeeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCccCcHHHHhCCCccccccccccCCC
Confidence            9 9999999999999999999999999999999999999999999999999999888888876655       3467899


Q ss_pred             CCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHH
Q 044696          154 RPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVI  214 (220)
Q Consensus       154 ~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~  214 (220)
                      +++|+++++.||++++.+++++.    |+|+|+.+.++++|+++.++|+|++|++++++++
T Consensus       231 ~~~f~~~~~~KDl~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~  287 (288)
T TIGR01692       231 QGGFGTALMLKDLGLAQDAAKSA----GAPTPLGALARQLYSLFDDKGHGGKDFSSVIQLL  287 (288)
T ss_pred             CCCcchHHHHhhHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCCCChHHHHHHh
Confidence            99999999999999999999999    9999999999999999999999999999999876

This enzyme belongs to the 3-hydroxyacid dehydrogenase family, sharing a common evolutionary origin and enzymatic mechanism with 6-phosphogluconate. HIBADH exhibits sequence similarity to the NAD binding domain of 6-phosphogluconate dehydrogenase above trusted (pfam03446).

>PLN02858 fructose-bisphosphate aldolase

Probab=100.00  E-value=5.1e-46  Score=370.43  Aligned_cols=216  Identities=24%  Similarity=0.346  Sum_probs=210.1

Q ss_pred             CCCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcC--CcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHH
Q 044696            1 ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERD--CWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFE   78 (220)
Q Consensus         1 ~~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G--~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~   78 (220)
                      +||++|+++++++|++||||||++|++++++++.+.++|  ++||||||+||++.|++|+|++|+||+++++++++|+|+
T Consensus        78 ~~g~~g~~~~l~~g~iivd~STi~p~~~~~la~~l~~~g~~~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~l~  157 (1378)
T PLN02858         78 FFGDEGAAKGLQKGAVILIRSTILPLQLQKLEKKLTERKEQIFLVDAYVSKGMSDLLNGKLMIIASGRSDAITRAQPFLS  157 (1378)
T ss_pred             HhchhhHHhcCCCcCEEEECCCCCHHHHHHHHHHHHhcCCceEEEEccCcCCHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999999  999999999999999999999999999999999999999


Q ss_pred             Hhcc-ceec-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCC
Q 044696           79 VLGK-PTFM-GGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPG  156 (220)
Q Consensus        79 ~~~~-~~~~-G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~  156 (220)
                      .||+ ++|+ |++|+|+++||+||++.++++++++|++.+++++|||++.++++|+.+++.||+++.+.|+|.+++|+++
T Consensus       158 ~~g~~i~~~~G~~G~g~~~KL~nN~l~~~~~~a~aEAl~la~~~Gld~~~l~~vl~~s~g~s~~~~~~~~~~~~~d~~~~  237 (1378)
T PLN02858        158 AMCQKLYTFEGEIGAGSKVKMVNELLEGIHLVASAEAMALGVRAGIHPWIIYDIISNAAGSSWIFKNHVPLLLKDDYIEG  237 (1378)
T ss_pred             HhcCceEEecCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCccCHHHHhhhhHhhcCCCCCC
Confidence            9999 8775 8999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696          157 GFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK  220 (220)
Q Consensus       157 f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~  220 (220)
                      |+++++.||++++++++++.    |+++|+.+.++++|+.+.+.|+|++|++++++++++.+|+
T Consensus       238 F~l~l~~KDl~la~~~A~~~----g~~lpl~~~a~~~~~~a~~~G~g~~D~sav~~~~~~~~g~  297 (1378)
T PLN02858        238 RFLNVLVQNLGIVLDMAKSL----PFPLPLLAVAHQQLISGSSSMQGDDTATSLAKVWEKVFGV  297 (1378)
T ss_pred             chhHHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHHcCC
Confidence            99999999999999999999    9999999999999999999999999999999999988764

>PLN02858 fructose-bisphosphate aldolase

Probab=100.00  E-value=5.4e-44  Score=355.96  Aligned_cols=216  Identities=29%  Similarity=0.426  Sum_probs=208.6

Q ss_pred             CCCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHh--cCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHH
Q 044696            1 ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARE--RDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFE   78 (220)
Q Consensus         1 ~~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~--~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~   78 (220)
                      +||++|+++++++|++||||||++|++++++++++++  +|++|+||||+|||..++.|+|++|+||++++|++++|+|+
T Consensus       398 l~g~~g~~~~l~~g~ivVd~STvsP~~~~~la~~l~~~g~g~~~lDAPVsGg~~~A~~G~L~imvgG~~~~~~~~~plL~  477 (1378)
T PLN02858        398 LFGDLGAVSALPAGASIVLSSTVSPGFVIQLERRLENEGRDIKLVDAPVSGGVKRAAMGTLTIMASGTDEALKSAGSVLS  477 (1378)
T ss_pred             HhchhhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhhCCCcEEEEccCCCChhhhhcCCceEEEECCHHHHHHHHHHHH
Confidence            3688899999999999999999999999999999999  99999999999999999999999999999999999999999


Q ss_pred             Hhcc-ceec-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCC
Q 044696           79 VLGK-PTFM-GGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPG  156 (220)
Q Consensus        79 ~~~~-~~~~-G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~  156 (220)
                      .|++ ++|+ |++|+|+++||+||++.++++++++|++.+++++|||+++++++++.+++.||+++.+.|+|.+++|+++
T Consensus       478 ~lg~~i~~~~g~~G~a~~~KL~nN~l~~~~~aa~aEal~la~k~Gld~~~l~evl~~s~g~s~~~~~~~~~~l~~d~~~~  557 (1378)
T PLN02858        478 ALSEKLYVIKGGCGAGSGVKMVNQLLAGVHIASAAEAMAFGARLGLNTRKLFDIISNAGGTSWMFENRVPHMLDNDYTPY  557 (1378)
T ss_pred             HHhCcEEEeCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccChhhhhccchhhcCCCCCC
Confidence            9999 8885 5699999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696          157 GFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK  220 (220)
Q Consensus       157 f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~  220 (220)
                      |+++++.||++++++++++.    |+|+|+++.++++|+.+.++|+|++|++++++++++..|+
T Consensus       558 f~l~l~~KDl~l~~~~a~~~----g~~~pl~~~~~~~~~~a~~~G~g~~D~sav~~~~~~~~g~  617 (1378)
T PLN02858        558 SALDIFVKDLGIVSREGSSR----KIPLHLSTVAHQLFLAGSASGWGRIDDAAVVKVYETLTGV  617 (1378)
T ss_pred             chhHHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCccChHHHHHHHHHhcCC
Confidence            99999999999999999999    9999999999999999999999999999999999987664

>PRK11559 garR tartronate semialdehyde reductase; Provisional

Probab=100.00  E-value=3.9e-43  Score=302.39  Aligned_cols=215  Identities=30%  Similarity=0.490  Sum_probs=207.7

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      ++++++++.+++|++|||+||++|.+++++++.+.++|++|+|+||+|+++.+..|++.+|+||+++++++++|+|+.++
T Consensus        77 ~~~~~~~~~~~~g~iiid~st~~~~~~~~l~~~~~~~g~~~~d~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~~l~~~~  156 (296)
T PRK11559         77 LGENGIIEGAKPGTVVIDMSSIAPLASREIAAALKAKGIEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMA  156 (296)
T ss_pred             cCcchHhhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCCcEEEcCCCCCHHHHhhCcEEEEECCCHHHHHHHHHHHHHhc
Confidence            46678889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhh
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAE  160 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~  160 (220)
                      . ++|+|+.|+|+.+|+++|++..+++++++|++.++++.|+|++++.+++..+.+.|+.++.+.|++.+++|.++|+++
T Consensus       157 ~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~Gi~~~~~~~~l~~~~~~s~~~~~~~~~~~~~d~~~~f~~~  236 (296)
T PRK11559        157 GSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALVLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRID  236 (296)
T ss_pred             CCeEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCcccCHHHHhhchHhhcCCCCCCcchH
Confidence            9 999999999999999999999999999999999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696          161 YMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK  220 (220)
Q Consensus       161 ~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~  220 (220)
                      ++.||++++++++++.    |+++|+.+.+.++|+.+.+.|+|++|++++++++++.+|+
T Consensus       237 ~~~KDl~~~~~~a~~~----g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~  292 (296)
T PRK11559        237 LHIKDLANALDTSHGV----GAPLPLTAAVMEMMQALKADGLGTADHSALACYYEKLAKV  292 (296)
T ss_pred             HHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCcCCcHHHHHHHHHhcCC
Confidence            9999999999999999    9999999999999999999999999999999999887763

>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase

Probab=100.00  E-value=5.2e-43  Score=301.14  Aligned_cols=215  Identities=40%  Similarity=0.691  Sum_probs=207.7

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      |+++++++.+++|++|||+||++|.+++++.+.++++|++|+|+||+|++..+..|++.+|+||+++++++++|+|+.++
T Consensus        74 ~~~~~~~~~~~~g~iivd~st~~~~~~~~l~~~l~~~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~lg  153 (291)
T TIGR01505        74 FGENGIIEGAKPGKTLVDMSSISPIESKRFAKAVKEKGIDYLDAPVSGGEIGAIEGTLSIMVGGDQAVFDRVKPLFEALG  153 (291)
T ss_pred             cCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCCEEecCCCCCHHHHhcCCEEEEecCCHHHHHHHHHHHHHhc
Confidence            56678888889999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhh
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAE  160 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~  160 (220)
                      . ++|+|+.|.|+.+|++||++...++.+++|++.++++.|+|+++++++++.+.+.|++++.+.+++.+++|+++|+++
T Consensus       154 ~~~~~~g~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~Gid~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~  233 (291)
T TIGR01505       154 KNIVLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGVDPVRVRQALRGGLAGSTVLEVKGERVIDRTFKPGFRID  233 (291)
T ss_pred             CCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCcccCHHHHhhChhhhcCCCCCCcchH
Confidence            9 999999999999999999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696          161 YMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK  220 (220)
Q Consensus       161 ~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~  220 (220)
                      ++.||++++++++++.    |+++|+.+.++++|+.+.+.|+|++|++++++++++.+++
T Consensus       234 ~~~KDl~~~~~~a~~~----g~~~~~~~~~~~~~~~a~~~g~~~~d~~~~~~~~~~~~~~  289 (291)
T TIGR01505       234 LHQKDLNLALDSAKAV----GANLPNTATVQELFNTLRANGGGQLDHSALVQALELLANH  289 (291)
T ss_pred             HHHHHHHHHHHHHHHc----CCCChhHHHHHHHHHHHHhcCCCccChHHHHHHHHHhcCC
Confidence            9999999999999999    9999999999999999999999999999999999887653

This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.

>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=100.00  E-value=2e-39  Score=280.14  Aligned_cols=203  Identities=22%  Similarity=0.236  Sum_probs=189.7

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc---
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK---   82 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~---   82 (220)
                      ++.+.+++|++|||+||++|.++++++++++++|++||||||+|++..+++|+ ++|+||++++|++++|+|+.++.   
T Consensus        79 ~i~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~vdapV~G~~~~a~~g~-~~~~gG~~~~~~~~~~~l~~~~~~~~  157 (299)
T PRK12490         79 DLYPLLSPGDIVVDGGNSRYKDDLRRAEELAERGIHYVDCGTSGGVWGLRNGY-CLMVGGDKEIYDRLEPVFKALAPEGP  157 (299)
T ss_pred             HHhccCCCCCEEEECCCCCchhHHHHHHHHHHcCCeEEeCCCCCCHHHHhcCC-eEEecCCHHHHHHHHHHHHHhcCcCC
Confidence            56777889999999999999999999999999999999999999999999998 89999999999999999999983   


Q ss_pred             -ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCHHHHHHHHhcc-CCChHHHHhhhhhhccccCCCCch
Q 044696           83 -PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG--LDVRKWRDAVKGG-AAGSMAMELYGERMIEKDFRPGGF  158 (220)
Q Consensus        83 -~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~G--l~~~~~~~~l~~~-~~~s~~~~~~~~~~~~~~~~~~f~  158 (220)
                       ++|+|++|+|+.+||+||++.++++++++|++.++++.|  +|+++++++++.+ .+.|++++.+.+++.++++  .|.
T Consensus       158 ~~~~~G~~g~a~~~Kl~~n~~~~~~~~~~aEa~~l~~~~g~~ld~~~~~~~~~~~~~~~s~~l~~~~~~~~~~~~--~~~  235 (299)
T PRK12490        158 GYVHAGPVGSGHFLKMVHNGIEYGMMQAYAEGLELLDKSDFDFDVEDVARLWRNGSVIRSWLLDLTVKALAEDPK--LAG  235 (299)
T ss_pred             cEEEECCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHcCCcHHHHHHHHHHHHHHhhCCC--hhh
Confidence             899999999999999999999999999999999999999  9999999999964 4889999999998876543  368


Q ss_pred             hhHHHHHH---HHHHHHHhhcccCCCCCccHHHHHH-HHHHHHHHCCCCCCChHHHHHHHH
Q 044696          159 AEYMVKDM---GMGVDVVEESEDERVVVLPGAALGK-QLFSAMVANGDGKFGTQGLVSVIE  215 (220)
Q Consensus       159 ~~~~~KD~---~~~~~~a~~~~~~~g~~~p~~~~~~-~~~~~a~~~G~g~~d~~av~~~~~  215 (220)
                      ++++.||+   +++++++++.    |+|+|++..+. .+|....++|.|..|++++.+++.
T Consensus       236 l~~~~KD~~~~~l~~~~A~~~----g~~~P~~~~a~~~~~~~~~~~~~~~~~~~a~~~~f~  292 (299)
T PRK12490        236 IKGYVNDSGEGRWTVEEAIEL----AVAAPVIAASLFMRFASQEDDSFHMKVVSALRNQFG  292 (299)
T ss_pred             hhHHHHhcCcHHHHHHHHHHc----CCCHHHHHHHHHHHHHhCccCChHHHHHHHHHHhhC
Confidence            89999998   8999999999    99999999995 999999999999999999988764

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=100.00  E-value=2.8e-38  Score=287.31  Aligned_cols=189  Identities=20%  Similarity=0.289  Sum_probs=177.6

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc---
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG---   81 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~---   81 (220)
                      +|+++.+.+|++|||+||++|+++++++++++++|++||||||+||+++|+.|+ ++|+||++++|++++|+|+.++   
T Consensus        91 ~gl~~~l~~G~iiID~sT~~~~~t~~~~~~l~~~Gi~fldapVSGG~~gA~~G~-~im~GG~~~a~~~v~pvL~~ia~k~  169 (493)
T PLN02350         91 KALSEYMEPGDCIIDGGNEWYENTERRIKEAAEKGLLYLGMGVSGGEEGARNGP-SLMPGGSFEAYKNIEDILEKVAAQV  169 (493)
T ss_pred             HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeCCCcCCHHHhcCCC-eEEecCCHHHHHHHHHHHHHHhhhc
Confidence            478899999999999999999999999999999999999999999999999999 9999999999999999999999   


Q ss_pred             ---c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHH---HhccCCChHHHHhhhhhhcccc-
Q 044696           82 ---K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDA---VKGGAAGSMAMELYGERMIEKD-  152 (220)
Q Consensus        82 ---~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~---l~~~~~~s~~~~~~~~~~~~~~-  152 (220)
                         + ++|+|++|+|+.+||+||.+.++++++++|++.++++ .|+|++++.++   ++.+.+.|++++.+.+.+..++ 
T Consensus       170 ~~~~~v~~vG~~GaG~~vKlv~N~i~~~~m~~iaEA~~l~~~~~Gld~~~l~~vf~~~~~g~~~S~llei~~~~l~~~d~  249 (493)
T PLN02350        170 DDGPCVTYIGPGGAGNFVKMVHNGIEYGDMQLISEAYDVLKSVGGLSNEELAEVFAEWNKGELESFLIEITADIFSVKDD  249 (493)
T ss_pred             CCCCcEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHcCCCccchHHHHHHHHHhhcCC
Confidence               5 9999999999999999999999999999999999999 59999999999   5678889999999999888775 


Q ss_pred             CCCCchhhHHHHHHH------HHHHHHhhcccCCCCCccH-HHHHHHHHHHHH
Q 044696          153 FRPGGFAEYMVKDMG------MGVDVVEESEDERVVVLPG-AALGKQLFSAMV  198 (220)
Q Consensus       153 ~~~~f~~~~~~KD~~------~~~~~a~~~~~~~g~~~p~-~~~~~~~~~~a~  198 (220)
                      |.++|.++++.||++      ++++.+.+.    |+|+|+ .+++.++|....
T Consensus       250 ~~~~f~l~~i~Kd~~~kGTg~w~~~~A~~l----gv~~p~i~~av~~r~~s~~  298 (493)
T PLN02350        250 KGDGYLVDKILDKTGMKGTGKWTVQQAAEL----SVAAPTIAASLDARYLSGL  298 (493)
T ss_pred             CCCCchHHHHHhhhcccchHHHHHHHHHHh----CCCccHHHHHHHHHHHhcc
Confidence            888999999999999      999999999    999999 777777776653

>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed

Probab=100.00  E-value=2.9e-36  Score=260.57  Aligned_cols=201  Identities=20%  Similarity=0.236  Sum_probs=182.3

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc---
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK---   82 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~---   82 (220)
                      ++.+.+.+|++|||+||++|..++++++.++++|++|||+||+|++..++.|. ++|+||+++++++++|+|+.+++   
T Consensus        79 ~l~~~l~~g~ivid~st~~~~~~~~~~~~~~~~g~~~~dapvsG~~~~a~~g~-~~~~gG~~~~~~~~~~~l~~~~~~~~  157 (301)
T PRK09599         79 ELAPLLSPGDIVIDGGNSYYKDDIRRAELLAEKGIHFVDVGTSGGVWGLERGY-CLMIGGDKEAVERLEPIFKALAPRAE  157 (301)
T ss_pred             HHHhhCCCCCEEEeCCCCChhHHHHHHHHHHHcCCEEEeCCCCcCHHHHhcCC-eEEecCCHHHHHHHHHHHHHHccccc
Confidence            56778889999999999999999999999999999999999999999999995 99999999999999999999986   


Q ss_pred             --ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCHHHHHHHHhccC-CChHHHHhhhhhhccccCCCCc
Q 044696           83 --PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE--AGLDVRKWRDAVKGGA-AGSMAMELYGERMIEKDFRPGG  157 (220)
Q Consensus        83 --~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~--~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~f  157 (220)
                        ++|+|++|+|+.+|+++|++.++++.+++|++.++++  +|+|+++++++++.+. ..|++++.+.+.+.++   +.|
T Consensus       158 ~~~~~~G~~G~g~~~Kl~~n~l~~~~~~~~aEa~~l~~~~~~gld~~~~~~~~~~~~~~~s~~l~~~~~~~~~~---~~~  234 (301)
T PRK09599        158 DGYLHAGPVGAGHFVKMVHNGIEYGMMQAYAEGFELLEASRFDLDLAAVAEVWRRGSVIRSWLLDLTADALAED---PKL  234 (301)
T ss_pred             CCeEeECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHhCCcHHHHHHHHHHHHHHhcC---CCH
Confidence              7999999999999999999999999999999999999  9999999999999875 6899999998888553   233


Q ss_pred             h-hhHHHHH---HHHHHHHHhhcccCCCCCccHHHHHHH-HHHHHHHCCCCCCChHHHHHHH
Q 044696          158 F-AEYMVKD---MGMGVDVVEESEDERVVVLPGAALGKQ-LFSAMVANGDGKFGTQGLVSVI  214 (220)
Q Consensus       158 ~-~~~~~KD---~~~~~~~a~~~~~~~g~~~p~~~~~~~-~~~~a~~~G~g~~d~~av~~~~  214 (220)
                      + +..+.||   ++++++.+.+.    |+|+|++.++.. +|....+.|+++.|.+++.+++
T Consensus       235 ~~~~~~~kd~~~~~~~~~~A~~~----~~~~P~~~~a~~~~~~~~~~~~~~~~~~~a~~~~f  292 (301)
T PRK09599        235 DEISGYVEDSGEGRWTVEEAIDL----AVPAPVIAAALFMRFRSRQEDSFADKVVAALRNGF  292 (301)
T ss_pred             HHHHHHHHhhCcHHHHHHHHHHc----CCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHHhc
Confidence            3 4445556   59999999999    999999999554 5999999999999999998876

>PRK09287 6-phosphogluconate dehydrogenase; Validated

Probab=100.00  E-value=1.6e-32  Score=248.34  Aligned_cols=181  Identities=19%  Similarity=0.280  Sum_probs=162.6

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P   83 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~   83 (220)
                      +++++.+.+|++|||+||++|.++++++++++++|++||||||+||+.+|+.|. ++|+||++++|++++|+|+.++. +
T Consensus        73 ~~l~~~l~~GdiiID~gn~~~~~t~~~~~~l~~~Gi~fvdapVSGG~~gA~~G~-siM~GG~~~a~~~~~piL~~ia~~~  151 (459)
T PRK09287         73 EQLLPLLEKGDIIIDGGNSNYKDTIRREKELAEKGIHFIGMGVSGGEEGALHGP-SIMPGGQKEAYELVAPILEKIAAKV  151 (459)
T ss_pred             HHHHhcCCCCCEEEECCCCCHHHHHHHHHHHHhcCCeEEecCCCCCHHHHhcCC-EEEEeCCHHHHHHHHHHHHHHhhhh
Confidence            468899999999999999999999999999999999999999999999999998 99999999999999999999998 8


Q ss_pred             -------eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHH---hccCCChHHHHhhhhhhcccc
Q 044696           84 -------TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFAD-EAGLDVRKWRDAV---KGGAAGSMAMELYGERMIEKD  152 (220)
Q Consensus        84 -------~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~-~~Gl~~~~~~~~l---~~~~~~s~~~~~~~~~~~~~~  152 (220)
                             +|+|+.|+|+.+||++|.+.++.+++++|++.+++ +.|+|++++.+++   +.+...|++++.+.+.+.++|
T Consensus       152 ~~g~~c~~~vG~~GaGh~vKmvhN~ie~~~mq~iaEa~~l~~~~~Gl~~~~l~~v~~~wn~g~~~S~l~ei~~~~l~~~d  231 (459)
T PRK09287        152 EDGEPCVTYIGPDGAGHYVKMVHNGIEYGDMQLIAEAYDLLKDGLGLSAEEIADVFAEWNKGELNSYLIEITADILRQKD  231 (459)
T ss_pred             cCCCCceeeeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccChHHHhHhHHHhcCC
Confidence                   99999999999999999999999999999999999 5999999999999   577789999999999999999


Q ss_pred             CCCCc-hhhHHH-----HH-HHHHHHHHhhcccCCCCCccHHHHH
Q 044696          153 FRPGG-FAEYMV-----KD-MGMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       153 ~~~~f-~~~~~~-----KD-~~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                      |.++. -++...     |- =+...+.+-++    |+|.|++..+
T Consensus       232 ~~~~~~~~d~i~d~~~~~gtg~Wt~~~a~~~----~v~~~~i~~A  272 (459)
T PRK09287        232 EETGKPLVDVILDKAGQKGTGKWTSQSALDL----GVPLTLITEA  272 (459)
T ss_pred             CCCCCcchHHhcCcccCCcHHHHHHHHHHHh----CCChHHHHHH
Confidence            85443 233321     11 25778888899    9999987765

>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating)

Probab=99.98  E-value=9.5e-31  Score=225.91  Aligned_cols=206  Identities=17%  Similarity=0.179  Sum_probs=178.9

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc---
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK---   82 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~---   82 (220)
                      ++.+.+++|++|||+||+.|.+++++.++++++|++|+|+||+|++.+++.| +.+|+||+++++++++|+|+.++.   
T Consensus        78 ~l~~~l~~g~ivid~st~~~~~t~~~~~~~~~~g~~~vda~vsGg~~~a~~G-~~~~~gG~~~~~~~~~~~l~~~~~~~~  156 (298)
T TIGR00872        78 ELAPTLEKGDIVIDGGNSYYKDSLRRYKLLKEKGIHLLDCGTSGGVWGRERG-YCFMIGGDGEAFARAEPLFADVAPEEQ  156 (298)
T ss_pred             HHHhhCCCCCEEEECCCCCcccHHHHHHHHHhcCCeEEecCCCCCHHHHhcC-CeeeeCCCHHHHHHHHHHHHHhcCcCC
Confidence            5677888999999999999999999999999999999999999999999999 699999999999999999999984   


Q ss_pred             -ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCHHHHHHHHhccC-CChHHHHhhhhhhccccCCCCch
Q 044696           83 -PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA--GLDVRKWRDAVKGGA-AGSMAMELYGERMIEKDFRPGGF  158 (220)
Q Consensus        83 -~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~--Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~f~  158 (220)
                       ++|+|+.|+|+.+|+++|.+.++.+++++|++.++++.  |+|++++.++++.+. ..|++++.+.+.+.++++.+.|.
T Consensus       157 ~~~~~G~~G~~~~~K~~~n~l~~~~~~~~aE~~~l~~~~g~~ld~~~~~~i~~~g~~~~s~~l~~~~~~~~~~~~~~~~~  236 (298)
T TIGR00872       157 GYLYCGPCGSGHFVKMVHNGIEYGMMAAIAEGFEILRNSQFDFDIPEVARVWRRGSVIRSWLLDLTAIAFRESPDLAEFS  236 (298)
T ss_pred             CEEEECCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCHHHHHHHHcCCchhHhHHHHHHHHHHhcCCcHHHHH
Confidence             69999999999999999999999999999999999998  579999999999986 68999999988888877766776


Q ss_pred             hh-HHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696          159 AE-YMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING  219 (220)
Q Consensus       159 ~~-~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~  219 (220)
                      .. ...+|.+.+++.+.+.    |+|+|.+..+.  |.+..... .+.-...++...|+..|
T Consensus       237 ~~~~~~~~~r~~v~~a~~~----g~p~P~~~~al--~~~~~~~~-~~~~~~~~~~~~r~~fg  291 (298)
T TIGR00872       237 GRVSDSGEGRWTVIAAIDL----GVPAPVIATSL--QSRFASRD-LDDFANKVLAALRKEFG  291 (298)
T ss_pred             HHHHhhccHHHHHHHHHHh----CCCHHHHHHHH--HHHHHhCC-CCCcHHHHHHHHHHhhC
Confidence            55 5789999999999999    99999999854  33333321 12234556666666554

This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=99.97  E-value=9.6e-30  Score=230.94  Aligned_cols=180  Identities=19%  Similarity=0.281  Sum_probs=157.9

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c-
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P-   83 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~-   83 (220)
                      ++++.+.+|++|||+||+.|.+++++++.+.++|++|||+||+||+.+|+.|. ++|+||++++|++++|+|+.++. + 
T Consensus        83 ~l~~~L~~g~iIID~gns~~~~t~~~~~~l~~~gi~fvdapVsGG~~gA~~G~-~im~GG~~~a~~~~~p~L~~ia~~~~  161 (467)
T TIGR00873        83 QLLPLLEKGDIIIDGGNSHYPDTERRYKELKAKGILFVGSGVSGGEEGARKGP-SIMPGGSAEAWPLVAPIFQKIAAKVD  161 (467)
T ss_pred             HHHhhCCCCCEEEECCCcCHHHHHHHHHHHHhcCCEEEcCCCCCCHHHHhcCC-cCCCCCCHHHHHHHHHHHHHHhhhcC
Confidence            57788899999999999999999999999999999999999999999999998 99999999999999999999997 6 


Q ss_pred             -----eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHH---hccCCChHHHHhhhhhhccccCC
Q 044696           84 -----TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFAD-EAGLDVRKWRDAV---KGGAAGSMAMELYGERMIEKDFR  154 (220)
Q Consensus        84 -----~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~-~~Gl~~~~~~~~l---~~~~~~s~~~~~~~~~~~~~~~~  154 (220)
                           +|+|+.|+|+.+||++|.+.++++++++|++.+++ +.|+|++++.+++   +.+...|++++...+.+.++|-.
T Consensus       162 ~~~~~~~~G~~GsG~~vKmvhN~i~~~~m~~~aEa~~ll~~~~g~~~~~l~~v~~~w~~~~~~S~l~~~~~~~~~~~d~~  241 (467)
T TIGR00873       162 GEPCCTWIGPDGAGHYVKMVHNGIEYGDMQLICEAYDILKDGLGLSNEEIAEVFTEWNNGELDSYLIEITADILKKKDED  241 (467)
T ss_pred             CCCceEEECCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCcccchHHHhHHHHHhccCCC
Confidence                 89999999999999999999999999999999985 7999999999999   57778899999998888776532


Q ss_pred             CCchhhHHH-----H-HHHHHHHHHhhcccCCCCCccHHHHH
Q 044696          155 PGGFAEYMV-----K-DMGMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       155 ~~f~~~~~~-----K-D~~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                      ...-++...     | --+..++.+-++    |+|.|++..+
T Consensus       242 ~~~~l~~i~~~~~~~gtg~wt~~~a~~~----~v~~p~i~~a  279 (467)
T TIGR00873       242 GKPLVDKILDTAGQKGTGKWTAISALDL----GVPVTLITES  279 (467)
T ss_pred             CCccHHhhcCcccCccHHHHHHHHHHHc----CCCchHHHHH
Confidence            122222221     1 125778889999    9999988765

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=99.97  E-value=4e-29  Score=226.89  Aligned_cols=181  Identities=18%  Similarity=0.266  Sum_probs=156.6

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc--
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK--   82 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~--   82 (220)
                      +++++.+.+|++|||+||+.|..++++.+++.++|++|||+||+||+.+|+.|. ++|+||++++|++++|+|+.++.  
T Consensus        85 ~~l~~~L~~g~iIID~gn~~~~dt~~r~~~l~~~Gi~fldapVSGG~~gA~~G~-~lm~GG~~~a~~~~~piL~~ia~~~  163 (470)
T PTZ00142         85 DNLLPLLEKGDIIIDGGNEWYLNTERRIKRCEEKGILYLGMGVSGGEEGARYGP-SLMPGGNKEAYDHVKDILEKCSAKV  163 (470)
T ss_pred             HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEcCCCCCCHHHHhcCC-EEEEeCCHHHHHHHHHHHHHHhhhc
Confidence            357788899999999999999999999999999999999999999999999999 89999999999999999999985  


Q ss_pred             -----ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHH---hccCCChHHHHhhhhhhccccC
Q 044696           83 -----PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFAD-EAGLDVRKWRDAV---KGGAAGSMAMELYGERMIEKDF  153 (220)
Q Consensus        83 -----~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~-~~Gl~~~~~~~~l---~~~~~~s~~~~~~~~~~~~~~~  153 (220)
                           ++|+|+.|+|+.+||++|.+.++++++++|++.+++ +.|+|++++.+++   +.+...|++++.....+..+|-
T Consensus       164 ~~~~~~~~~G~~GaGh~vKmvhN~ie~~~m~~iaEa~~l~~~~~gl~~~~l~~v~~~w~~g~~~S~l~ei~~~~~~~~d~  243 (470)
T PTZ00142        164 GDSPCVTYVGPGSSGHYVKMVHNGIEYGDMQLISESYKLMKHILGMSNEELSEVFNKWNEGILNSYLIEITAKILAKKDD  243 (470)
T ss_pred             CCCCeEEEECCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHcCCCccCHHHHHHHHHhhcccc
Confidence                 499999999999999999999999999999999998 7999999999998   4677889999887776665542


Q ss_pred             CC-CchhhHHH-----HH-HHHHHHHHhhcccCCCCCccHHHHH
Q 044696          154 RP-GGFAEYMV-----KD-MGMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       154 ~~-~f~~~~~~-----KD-~~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                      .. ..-++...     |- =+...+.+-++    |+|.|+...+
T Consensus       244 ~~~~~~l~~i~d~~~~~gtg~wt~~~a~~~----~v~~p~i~~a  283 (470)
T PTZ00142        244 LGEEHLVDKILDIAGSKGTGKWTVQEALER----GIPVPTMAAS  283 (470)
T ss_pred             cCCCcchhhhcCcccCCchHHhHHHHHHHc----CCCchHHHHH
Confidence            21 12333321     11 25778888999    9999988776

>PF14833 NAD_binding_11: NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase; PDB: 3OBB_A 3Q3C_A 2UYY_D 3G0O_A 1WP4_A 2CVZ_B 1YB4_A 3PDU_G 2I9P_D 2GF2_D

Probab=99.96  E-value=9.1e-29  Score=186.98  Aligned_cols=121  Identities=31%  Similarity=0.543  Sum_probs=114.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhh-hccccCCCCchhhHHHHHHHH
Q 044696           90 GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGER-MIEKDFRPGGFAEYMVKDMGM  168 (220)
Q Consensus        90 G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~-~~~~~~~~~f~~~~~~KD~~~  168 (220)
                      |+|+++|++||++.++++.+++|++.++++.|||+++++++|+.+++.|++++.+.|+ +.+++|+|+|+++++.||+++
T Consensus         1 G~g~~~Kl~~N~l~~~~~~~~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~~~~~~~~~~~~~~~~f~l~~~~KDl~l   80 (122)
T PF14833_consen    1 GAGQAMKLANNLLIAANMAALAEALALAEKAGLDPEQLLDVLSAGSGGSWMLKNRAPRMILNGDFDPGFSLDLARKDLRL   80 (122)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS-HHHHHHHHHTSTTHBHHHHHHHHHHHHTTTTCSSSBHHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHccCCcCchHHHhhhhhhhhcccCCccchhHhhccHHHH
Confidence            7899999999999999999999999999999999999999999999999999999995 999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHH
Q 044696          169 GVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVI  214 (220)
Q Consensus       169 ~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~  214 (220)
                      +++++++.    |+|+|+.+.++++|+.+.++|+|++|+++++++|
T Consensus        81 ~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~D~sai~~~~  122 (122)
T PF14833_consen   81 ALDLAKEA----GVPLPLGSAARQLYQAAKAQGGGDEDFSAIYKLL  122 (122)
T ss_dssp             HHHHHHHT----T---HHHHHHHHHHHHHHHTTTTTSBGGGGHHHH
T ss_pred             HHHHHHHc----CCCCHHHHHHHHHHHHHHhcCCCCCCHHHHHhHC
Confidence            99999999    9999999999999999999999999999999986

...

>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase

Probab=99.93  E-value=3.4e-25  Score=199.11  Aligned_cols=178  Identities=16%  Similarity=0.115  Sum_probs=160.6

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc--CCc-EEEecCCCChHHhhccce--------eEEecCCHHhHHHH
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARER--DCW-AVDAPVSGGDIGARDGKL--------AIFAAGDSAVVQWL   73 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~--G~~-~ldapV~g~~~~a~~g~l--------~i~~gG~~~~~~~~   73 (220)
                      +++.+++++|++||++||++|.+++++.+.+.++  |.. ++|+||+++|..+..|++        .+++|+++++++++
T Consensus       104 ~~i~~~l~~g~lvi~~STv~pgt~~~l~~~~~~~~~g~~~~~d~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~~  183 (411)
T TIGR03026       104 ETIAKHLRKGATVVLESTVPPGTTEEVVKPILERASGLKLGEDFYLAYNPEFLREGNAVHDLLNPDRIVGGETEEAGEAV  183 (411)
T ss_pred             HHHHHhcCCCCEEEEeCcCCCCchHHHHHHHHHhhcCCCCCCCceEEECCCcCCCCChhhhhcCCCEEEEeCCHHHHHHH
Confidence            3567788999999999999999999998776655  654 789999999999999998        89999999999999


Q ss_pred             HHHHHHhc-c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccc
Q 044696           74 TPLFEVLG-K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEK  151 (220)
Q Consensus        74 ~~~l~~~~-~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~  151 (220)
                      +++|+.++ + ++++|+++.|+.+|+++|++...+++.++|++.+|++.|+|+++++++++.+           |+|..+
T Consensus       184 ~~l~~~~~~~~~~~~~~~~~Ae~~Kl~~N~~~a~~ia~~nE~~~la~~~GiD~~~v~~~~~~~-----------~~i~~~  252 (411)
T TIGR03026       184 AELYAPIIEDGPVLVTSIETAEMIKLAENTFRAVKIAFANELARICEALGIDVYEVIEAAGTD-----------PRIGFN  252 (411)
T ss_pred             HHHHHHhccCCCEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhCCC-----------CCCCCC
Confidence            99999998 6 9999999999999999999999999999999999999999999999999864           456677


Q ss_pred             cCCCCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          152 DFRPGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       152 ~~~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                      +|.|+|  ...++.||++++++.+++.    |+++|+++++++..+.-
T Consensus       253 ~~~pg~g~gg~c~~KD~~~l~~~a~~~----g~~~~l~~~~~~~N~~~  296 (411)
T TIGR03026       253 FLNPGPGVGGHCIPKDPLALIYKAKEL----GYNPELIEAAREINDSQ  296 (411)
T ss_pred             cCCCCCCCCCCchhhhHHHHHHHHHhc----CCCcHHHHHHHHHHHHh
Confidence            888865  6778999999999999999    99999999998876654

All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.

>COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.89  E-value=4.7e-22  Score=162.79  Aligned_cols=199  Identities=21%  Similarity=0.263  Sum_probs=158.1

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc----
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK----   82 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~----   82 (220)
                      +.+.+.+|.+|||-..+....+.+.+++++++|++|+|+-.|||+.+++.|- .+|+|||+++|++++|+|+.++.    
T Consensus        80 la~~L~~GDivIDGGNS~y~Ds~rr~~~l~~kgi~flD~GTSGG~~G~~~G~-~lMiGG~~~a~~~~~pif~~lA~ge~G  158 (300)
T COG1023          80 LAPLLSAGDIVIDGGNSNYKDSLRRAKLLAEKGIHFLDVGTSGGVWGAERGY-CLMIGGDEEAVERLEPIFKALAPGEDG  158 (300)
T ss_pred             HHhhcCCCCEEEECCccchHHHHHHHHHHHhcCCeEEeccCCCCchhhhcCc-eEEecCcHHHHHHHHHHHHhhCcCcCc
Confidence            5567889999999999999999999999999999999999999999999998 89999999999999999999873    


Q ss_pred             ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCHHHHHHHHhccC-CChHHHHhhhhhhcc-ccCCCCch
Q 044696           83 PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE--AGLDVRKWRDAVKGGA-AGSMAMELYGERMIE-KDFRPGGF  158 (220)
Q Consensus        83 ~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~--~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~-~~~~~~f~  158 (220)
                      ..|+|+.|+|+.+||++|-+.+++|++++|.+.+.++  +.+|.+.+.++.+.++ ..||+++-....+.+ .+++   .
T Consensus       159 yl~~Gp~GsGHfvKMVHNGIEYGmM~a~aEGfelL~~s~fD~D~~~VA~vW~hGSVIrSWLldLt~~Af~~d~~L~---q  235 (300)
T COG1023         159 YLYCGPSGSGHFVKMVHNGIEYGMMQAIAEGFELLKNSPFDYDLEAVAEVWNHGSVIRSWLLDLTAEAFKKDPDLD---Q  235 (300)
T ss_pred             cccccCCCcchhHHHHhccHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhCcchHHHHHHHHHHHHHhhCCCHH---H
Confidence            6899999999999999999999999999999999988  5678888999999877 568888766554432 1111   1


Q ss_pred             hhHHHHH---HHHHHHHHhhcccCCCCCccHHHHHH-HHHHHHHHCCCCCCChHH-HHHHHHHhc
Q 044696          159 AEYMVKD---MGMGVDVVEESEDERVVVLPGAALGK-QLFSAMVANGDGKFGTQG-LVSVIERIN  218 (220)
Q Consensus       159 ~~~~~KD---~~~~~~~a~~~~~~~g~~~p~~~~~~-~~~~~a~~~G~g~~d~~a-v~~~~~~~~  218 (220)
                      +.-...|   =+..++++-+.    |+|.|++..+. .+|+.-     .+..|+. ++..+|...
T Consensus       236 ~~g~v~dSGEGrWTv~~aldl----gvpaPVia~al~~Rf~S~-----~~d~f~~kvlaalR~~F  291 (300)
T COG1023         236 ISGRVSDSGEGRWTVEEALDL----GVPAPVIALALMMRFRSR-----QDDTFAGKVLAALRNEF  291 (300)
T ss_pred             hcCeeccCCCceeehHHHHhc----CCCchHHHHHHHHHHhcc-----chhhHHHHHHHHHHHHh
Confidence            1111111   25567888899    99999987663 444432     2334443 444455443

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=99.86  E-value=2.9e-22  Score=158.64  Aligned_cols=86  Identities=34%  Similarity=0.628  Sum_probs=76.4

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      ++++ +++++.+|++|||+||++|+++++++++++++|++|||+||+|+++.+++|+|++|+||++++|++++|+|++|+
T Consensus        76 ~~~~-i~~~l~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapV~Gg~~~a~~g~l~~~~gG~~~~~~~~~~~l~~~~  154 (163)
T PF03446_consen   76 FGEN-ILAGLRPGKIIIDMSTISPETSRELAERLAAKGVRYVDAPVSGGPPGAEEGTLTIMVGGDEEAFERVRPLLEAMG  154 (163)
T ss_dssp             HCTT-HGGGS-TTEEEEE-SS--HHHHHHHHHHHHHTTEEEEEEEEESHHHHHHHTTEEEEEES-HHHHHHHHHHHHHHE
T ss_pred             hhhH-HhhccccceEEEecCCcchhhhhhhhhhhhhccceeeeeeeecccccccccceEEEccCCHHHHHHHHHHHHHHh
Confidence            4556 999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-cee-cCC
Q 044696           82 K-PTF-MGG   88 (220)
Q Consensus        82 ~-~~~-~G~   88 (220)
                      . ++| +||
T Consensus       155 ~~v~~~~G~  163 (163)
T PF03446_consen  155 KNVYHYVGP  163 (163)
T ss_dssp             EEEEEE-ES
T ss_pred             CCceeeeCc
Confidence            9 885 486

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=99.83  E-value=8.5e-21  Score=165.81  Aligned_cols=198  Identities=14%  Similarity=0.096  Sum_probs=167.3

Q ss_pred             hhhcCCCCCEEEecCC-CCHHH--HHHHHHHHHh---cCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696            7 IVSALNPGAVYVDTTS-SHPAL--AREIFKVARE---RDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVL   80 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST-~~p~~--~~~la~~~~~---~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~   80 (220)
                      +++.++++.++|+++| ++|++  .+.+++.+.+   +++.+++.|..........+++.+++||+++.+++++++|+..
T Consensus        90 v~~~l~~~~~vi~~~~Gi~~~~~~~~~l~~~l~~~~~~~~~~~~gP~~a~~~~~~~~~~~~~~~~~~~~~~~v~~ll~~~  169 (328)
T PRK14618         90 TLAGLPRALGYVSCAKGLAPDGGRLSELARVLEFLTQARVAVLSGPNHAEEIARFLPAATVVASPEPGLARRVQAAFSGP  169 (328)
T ss_pred             HHHhcCcCCEEEEEeeccccCCCccchHHHHHHHhcCCCeEEEECccHHHHHHcCCCeEEEEEeCCHHHHHHHHHHhCCC
Confidence            4566788999999999 68876  7788888876   7777888776665555556899999999999999999999999


Q ss_pred             cc-ce--------ecCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhc----cCCCh
Q 044696           81 GK-PT--------FMGG---------AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKG----GAAGS  138 (220)
Q Consensus        81 ~~-~~--------~~G~---------~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~----~~~~s  138 (220)
                      +. ++        ++|.         .|.++.+|+.+|+.......++.|++.++++.|++++++++++..    ++..|
T Consensus       170 ~~~v~~~~di~g~~~~~~lkN~~ai~~G~~~~~k~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~gDl~~t~~s  249 (328)
T PRK14618        170 SFRVYTSRDRVGVELGGALKNVIALAAGMVDGLKLGDNAKAALITRGLREMVRFGVALGAEEATFYGLSGLGDLIATATS  249 (328)
T ss_pred             cEEEEecCCccchhhhHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHhCCCccchhcCcchhheeeEecc
Confidence            87 65        4665         699999999999999999999999999999999999999999775    35678


Q ss_pred             HHHHhhh--hhhccc---c-CCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHH
Q 044696          139 MAMELYG--ERMIEK---D-FRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVS  212 (220)
Q Consensus       139 ~~~~~~~--~~~~~~---~-~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~  212 (220)
                      +..+++.  +++.++   + |+++|.+....||++++.+.+++.    ++++|+++.+.+++       +++.|...+++
T Consensus       250 ~~~rn~~~g~~~~~g~~~~~~~~~~~~~~g~kd~~~~~~la~~~----~~~~Pl~~~~~~~~-------~~~~~~~~~~~  318 (328)
T PRK14618        250 PHSRNRAAGEAIVRGVDREHLEAGGKVVEGLYTVKALDAWAKAH----GHDLPIVEAVARVA-------RGGWDPLAGLR  318 (328)
T ss_pred             CCCccHHHHHHHhCCCCHHHHHHcCCEEecHHHHHHHHHHHHHh----CCCCCHHHHHHHHH-------hCCCCHHHHHH
Confidence            8888874  488888   4 677899999999999999999999    99999999998887       46667777666


Q ss_pred             HHH
Q 044696          213 VIE  215 (220)
Q Consensus       213 ~~~  215 (220)
                      .+-
T Consensus       319 ~~~  321 (328)
T PRK14618        319 SLM  321 (328)
T ss_pred             HHh
Confidence            553

>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional

Probab=99.83  E-value=1.6e-19  Score=162.51  Aligned_cols=172  Identities=12%  Similarity=0.106  Sum_probs=145.5

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCC--------------cEEEec--CCCChHHhhccceeEEecC-CH
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDC--------------WAVDAP--VSGGDIGARDGKLAIFAAG-DS   67 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~--------------~~ldap--V~g~~~~a~~g~l~i~~gG-~~   67 (220)
                      +++.+++++|++||++||++|.+++++...+.+++.              .++++|  +..|...+..+++..++|| ++
T Consensus       103 ~~i~~~l~~g~iVI~~STv~pgtt~~~~~~l~~~~~~~~~~~~~g~~~~f~v~~~PE~~~~G~~~~~~~~~~~vvgG~~~  182 (415)
T PRK11064        103 KSIAPVLKKGDLVILESTSPVGATEQMAEWLAEARPDLTFPQQAGEQADINIAYCPERVLPGQVMVELIKNDRVIGGMTP  182 (415)
T ss_pred             HHHHHhCCCCCEEEEeCCCCCCHHHHHHHHHHHhccCCcccccccCCCCeEEEECCCccCCCChhhhhcCCCEEEEeCCH
Confidence            467888999999999999999999999998887643              358888  8888888888999999999 99


Q ss_pred             HhHHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh
Q 044696           68 AVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE  146 (220)
Q Consensus        68 ~~~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~  146 (220)
                      +.+++++++++.++. ++++|++++|..+|+++|++.+..++.+.|+..+|++.|+|++++++.++..+..        .
T Consensus       183 ~~~~~~~~ly~~~~~~~~~~~~~~~Ae~~Kl~~N~~~a~~ia~~nE~~~lae~~GiD~~~v~~~~~~~~ri--------~  254 (415)
T PRK11064        183 VCSARASELYKIFLEGECVVTNSRTAEMCKLTENSFRDVNIAFANELSLICADQGINVWELIRLANRHPRV--------N  254 (415)
T ss_pred             HHHHHHHHHHHHhcCCCeeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhccCCCc--------c
Confidence            999999999999999 9999999999999999999999999999999999999999999999998754311        1


Q ss_pred             hhccccCCC--CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696          147 RMIEKDFRP--GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA  196 (220)
Q Consensus       147 ~~~~~~~~~--~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~  196 (220)
                           -+.|  +|.-.++.||......   ..    +.++++.+++++..+.
T Consensus       255 -----~l~pG~G~GG~ClpkD~~~L~~---~~----~~~~~l~~~a~~~N~~  294 (415)
T PRK11064        255 -----ILQPGPGVGGHCIAVDPWFIVA---QN----PQQARLIRTAREVNDG  294 (415)
T ss_pred             -----cCCCCCCCCCccccccHHHHHH---hc----CCccHHHHHHHHHHHH
Confidence                 1223  5667788999987643   45    6677888888665443

>PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional

Probab=99.81  E-value=3.3e-19  Score=160.74  Aligned_cols=177  Identities=12%  Similarity=0.102  Sum_probs=146.1

Q ss_pred             CccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHh--cCCcEEE--------ecCCCChHHhhccceeEEecC-CHHhHH
Q 044696            3 DPDGIVSALNPGAVYVDTTSSHPALAREIFKVARE--RDCWAVD--------APVSGGDIGARDGKLAIFAAG-DSAVVQ   71 (220)
Q Consensus         3 g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~--~G~~~ld--------apV~g~~~~a~~g~l~i~~gG-~~~~~~   71 (220)
                      +.++|.+++++|++||++||+.|.+++++.+...+  .|.+|.|        .|+.+|.......++..+++| +++..+
T Consensus       102 a~~~i~~~l~~g~lVI~~STv~pgtt~~~~~~~l~~~~g~~~~~~~~~~~~PE~v~~G~a~~~~~~~~riv~G~~~~~~~  181 (425)
T PRK15182        102 ASETVGTVLNRGDIVVYESTVYPGCTEEECVPILARMSGMTFNQDFYVGYSPERINPGDKKHRLTNIKKITSGSTAQIAE  181 (425)
T ss_pred             HHHHHHHhcCCCCEEEEecCCCCcchHHHHHHHHHhccCCCcCCCeeEeeCCCcCCCCcccccccCCCeEEECCCHHHHH
Confidence            45688999999999999999999999987655544  4888888        556677776666666655555 566778


Q ss_pred             HHHHHHHHhc-c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhc
Q 044696           72 WLTPLFEVLG-K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMI  149 (220)
Q Consensus        72 ~~~~~l~~~~-~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~  149 (220)
                      +++++++.+. . ++++++++.|..+|+++|++.+.+++.+.|+..+|++.|+|.+++++++...    |.       +.
T Consensus       182 ~~~~ly~~~~~~~~~~~~~~~~AE~~Kl~~N~~~av~Ia~~NE~a~lae~~GiD~~~v~~a~~~~----~~-------~~  250 (425)
T PRK15182        182 LIDEVYQQIISAGTYKAESIKVAEAAKVIENTQRDLNIALVNELAIIFNRLNIDTEAVLRAAGSK----WN-------FL  250 (425)
T ss_pred             HHHHHHHHHhhcCcEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCC----CC-------cc
Confidence            8999999997 4 8899999999999999999999999999999999999999999999996543    21       11


Q ss_pred             cccCCCC-chhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696          150 EKDFRPG-GFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA  196 (220)
Q Consensus       150 ~~~~~~~-f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~  196 (220)
                        .+.|+ |.-.+.-||....+..+++.    |+++++..++++..+.
T Consensus       251 --~~~pG~vGG~ClpkD~~~L~~~a~~~----g~~~~l~~~a~~iN~~  292 (425)
T PRK15182        251 --PFRPGLVGGHCIGVDPYYLTHKSQGI----GYYPEIILAGRRLNDN  292 (425)
T ss_pred             --cCCCCccccccccccHHHHHHHHHhc----CCCcHHHHHHHHHHHH
Confidence              13355 67778999999999999999    9999999999877654

>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=99.76  E-value=2.1e-17  Score=143.36  Aligned_cols=185  Identities=16%  Similarity=0.101  Sum_probs=153.9

Q ss_pred             cCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEec---CCHHhHHHHHHHHHHhcc-cee
Q 044696           10 ALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA---GDSAVVQWLTPLFEVLGK-PTF   85 (220)
Q Consensus        10 ~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~g---G~~~~~~~~~~~l~~~~~-~~~   85 (220)
                      ...++.++|.+||. +....++++.+...+..++|.|+.+....    .+..+++   |+++++++++++++.+|+ ++|
T Consensus       106 ~~~~~~~ii~ssts-~~~~~~la~~~~~~~~~~~~hp~~p~~~~----~lveiv~~~~t~~~~~~~~~~~~~~lG~~~v~  180 (308)
T PRK06129        106 ALAPPHAILASSTS-ALLASAFTEHLAGRERCLVAHPINPPYLI----PVVEVVPAPWTAPATLARAEALYRAAGQSPVR  180 (308)
T ss_pred             HhCCCcceEEEeCC-CCCHHHHHHhcCCcccEEEEecCCCcccC----ceEEEeCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence            34567777765555 55688899998888889999999864221    4778886   899999999999999999 999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHHHHH
Q 044696           86 MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKD  165 (220)
Q Consensus        86 ~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD  165 (220)
                      +|+.+.|.   ++||+    +...+.|++.++++.|+|++++.++++.+.+.+|.+  +.|.+..++|.++|...++.||
T Consensus       181 v~~~~~G~---i~nrl----~~a~~~EA~~l~~~g~~~~~~id~~~~~~~g~~~~~--~gp~~~~d~~~~~g~~~~~~k~  251 (308)
T PRK06129        181 LRREIDGF---VLNRL----QGALLREAFRLVADGVASVDDIDAVIRDGLGLRWSF--MGPFETIDLNAPGGVADYAQRY  251 (308)
T ss_pred             ecCCCccH---HHHHH----HHHHHHHHHHHHHcCCCCHHHHHHHHHhccCCCccC--cCHHHHHhccccccHHHHHHHH
Confidence            99776665   56664    447999999999999999999999999988888776  7888888888889999999999


Q ss_pred             HHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHH
Q 044696          166 MGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVS  212 (220)
Q Consensus       166 ~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~  212 (220)
                      ..++.+++++.    +.|.|++....+......+.-++..++..+.+
T Consensus       252 ~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (308)
T PRK06129        252 GPMYRRMAAER----GQPVPWDGELVARVEAERRAALPLDQLAARQA  294 (308)
T ss_pred             HHHHHhhcccc----CCCchhhHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence            99999999999    99999988776666667777788888887655

>PRK15057 UDP-glucose 6-dehydrogenase; Provisional

Probab=99.76  E-value=2.3e-17  Score=147.27  Aligned_cols=169  Identities=15%  Similarity=0.065  Sum_probs=139.0

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccce--------eEEecCCHHhHHHHHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKL--------AIFAAGDSAVVQWLTPLF   77 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l--------~i~~gG~~~~~~~~~~~l   77 (220)
                      ++.+ +++|+++|++||++|.+++++.+.+.++|+.|       +|..+..|++        .+++||+++..+++.++|
T Consensus       103 ~i~~-~~~g~lVV~~STv~pgtt~~l~~~~~~~~v~~-------~PE~l~~G~a~~d~~~p~rvv~G~~~~~~~~~~~~l  174 (388)
T PRK15057        103 DVVE-INPYAVMVIKSTVPVGFTAAMHKKYRTENIIF-------SPEFLREGKALYDNLHPSRIVIGERSERAERFAALL  174 (388)
T ss_pred             HHHh-cCCCCEEEEeeecCCchHHHHHHHhhcCcEEE-------CcccccCCcccccccCCCEEEEEcCcHHHHHHHHHH
Confidence            4555 68999999999999999999999988877666       8889999999        999999999999999999


Q ss_pred             HH--hcc-ce-ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccC
Q 044696           78 EV--LGK-PT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDF  153 (220)
Q Consensus        78 ~~--~~~-~~-~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~  153 (220)
                      ..  ++. +. +++++++|..+|+++|.+.+..++.+.|...+|++.|+|.+++++++...+..+       +..+.  .
T Consensus       175 ~~~~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~NE~a~lae~~GiD~~eV~~a~~~d~ri~-------~~~l~--p  245 (388)
T PRK15057        175 QEGAIKQNIPTLFTDSTEAEAIKLFANTYLAMRVAYFNELDSYAESLGLNTRQIIEGVCLDPRIG-------NHYNN--P  245 (388)
T ss_pred             HhhhhcCCCceeeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHhcCCCCCC-------CccCC--C
Confidence            64  566 54 799999999999999999999999999999999999999999999998643211       11110  0


Q ss_pred             CCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          154 RPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       154 ~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                      -++|.-.++-||.......+  .    ++++++.+++++.-+.-
T Consensus       246 G~G~GG~ClpkD~~~L~~~~--~----~~~~~l~~~~~~~N~~~  283 (388)
T PRK15057        246 SFGYGGYCLPKDTKQLLANY--Q----SVPNNLISAIVDANRTR  283 (388)
T ss_pred             CCCCCCcChhhhHHHHHHhc--c----CCCcHHHHHHHHHHHHh
Confidence            13677889999999886555  5    67788999987765543

>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated

Probab=99.75  E-value=4.6e-18  Score=147.77  Aligned_cols=198  Identities=13%  Similarity=0.064  Sum_probs=152.8

Q ss_pred             chhhcCCCCCEEEecC-CCCHHHHHHHHHHHHhc-----CCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696            6 GIVSALNPGAVYVDTT-SSHPALAREIFKVARER-----DCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEV   79 (220)
Q Consensus         6 gi~~~~~~g~~ivd~S-T~~p~~~~~la~~~~~~-----G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~   79 (220)
                      ++.+.+.+++++|+++ |++|++.+++++.+++.     ...++++|..+....+...++.++.|++.+.+++++++|+.
T Consensus        90 ~l~~~~~~~~~vi~~~ngv~~~~~~~~~~~l~~~~~~~~~~~~~~~P~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~  169 (325)
T PRK00094         90 QLKPLLPPDAPIVWATKGIEPGTGKLLSEVLEEELPDLAPIAVLSGPSFAKEVARGLPTAVVIASTDEELAERVQELFHS  169 (325)
T ss_pred             HHHhhcCCCCEEEEEeecccCCCCCcHHHHHHHHcCCCCceEEEECccHHHHHHcCCCcEEEEEeCCHHHHHHHHHHhCC
Confidence            4556677899999998 99998888888877775     34467777766555566667888888999999999999998


Q ss_pred             hcc-ceecCC-----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc----CCC
Q 044696           80 LGK-PTFMGG-----------------AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG----AAG  137 (220)
Q Consensus        80 ~~~-~~~~G~-----------------~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~----~~~  137 (220)
                      .+. +++..+                 .|.+..+|+++|.+......++.|++.++++.|+|++++++++..+    ...
T Consensus       170 ~~~~~~~~~d~~g~~~~k~~~N~~~~~~g~~~~~k~~~n~~~~~~~~~~~E~~~la~~~G~d~~~~~~~~~~~~~~~~~~  249 (325)
T PRK00094        170 PYFRVYTNTDVIGVELGGALKNVIAIAAGIADGLGLGDNARAALITRGLAEITRLGVALGANPETFLGLAGLGDLVLTCT  249 (325)
T ss_pred             CCEEEEecCCcchhhHHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHhCCChhhhhcccHhhhhhhhcc
Confidence            886 655433                 2788889999999999999999999999999999999999876543    122


Q ss_pred             hHHHHhhh--hhhcccc-C-----CCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHH
Q 044696          138 SMAMELYG--ERMIEKD-F-----RPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQG  209 (220)
Q Consensus       138 s~~~~~~~--~~~~~~~-~-----~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~a  209 (220)
                      |+..+++.  ..+..+. +     .++ .+..+.||++++.+.+++.    |+++|+.+.+.++|       +.+.+...
T Consensus       250 s~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~kd~~~~~~~a~~~----~~~~P~~~~~~~~~-------~~~~~~~~  317 (325)
T PRK00094        250 SPLSRNRRFGLALGQGKSLEEALAEIG-MVAEGVRTAKAVYELAKKL----GVEMPITEAVYAVL-------YEGKDPRE  317 (325)
T ss_pred             CCCCccHHHHHHHHCCCCHHHHHHHcC-CEeecHHHHHHHHHHHHHh----CCCCCHHHHHHHHH-------cCCCCHHH
Confidence            33333333  3343332 1     112 5677899999999999999    99999999999998       46778777


Q ss_pred             HHHHHH
Q 044696          210 LVSVIE  215 (220)
Q Consensus       210 v~~~~~  215 (220)
                      +++.+.
T Consensus       318 ~~~~~~  323 (325)
T PRK00094        318 AVEDLM  323 (325)
T ss_pred             HHHHHh
Confidence            766553

>COG0362 Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.75  E-value=1.5e-17  Score=144.90  Aligned_cols=180  Identities=20%  Similarity=0.282  Sum_probs=150.6

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc----
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG----   81 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~----   81 (220)
                      .+++++.+|.++||-..+....+.+.-+.+.++|++||-+.||||-.+|..|. .||.||++++|+.+.|+|+.++    
T Consensus        87 ~L~p~Le~gDIiIDGGNs~y~DT~RR~~eL~~~Gi~FvG~GVSGGEeGA~~GP-SiMpGG~~eay~~v~pil~~IaAk~~  165 (473)
T COG0362          87 QLLPLLEKGDIIIDGGNSHYKDTIRRNKELSEKGILFVGMGVSGGEEGARHGP-SIMPGGQKEAYELVAPILTKIAAKVD  165 (473)
T ss_pred             HHHhhcCCCCEEEeCCCcCCchHHHHHHHHHhcCCeEEeccccccccccccCC-CcCCCCCHHHHHHHHHHHHHHHhhcC
Confidence            57889999999999999999999999999999999999999999999999998 8999999999999999999996    


Q ss_pred             --c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHhc---cCCChHHHHhhhhhhccccCC
Q 044696           82 --K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAVKG---GAAGSMAMELYGERMIEKDFR  154 (220)
Q Consensus        82 --~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l~~---~~~~s~~~~~~~~~~~~~~~~  154 (220)
                        . +.|+|+.|+|+.+|+++|-+-++-|+.++|+..+.+. .|++.+++.+++..   +-..|.+++-...-+...|-+
T Consensus       166 g~pCc~~iG~~GAGHfVKmVHNGIEYgDMQlIaE~Y~ilk~~lgls~~ei~~vF~~WN~geL~SYLIeIT~~IL~~kD~~  245 (473)
T COG0362         166 GEPCCTWIGPDGAGHFVKMVHNGIEYGDMQLIAEAYDILKDGLGLSAEEIAEVFEEWNKGELDSYLIEITADILRKKDEE  245 (473)
T ss_pred             CCCceeeECCCCCCceeeeeecCchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhccCcchHHHHHHHHHHHhhcCcc
Confidence              4 8999999999999999999999999999999999988 99999999888765   445677777665555555544


Q ss_pred             CC-chhhHHHHHH------HHHHHHHhhcccCCCCCccHHHHH
Q 044696          155 PG-GFAEYMVKDM------GMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       155 ~~-f~~~~~~KD~------~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                      .+ --++..+.-.      +.....|-+.    |+|+++...+
T Consensus       246 ~~kplvd~ILD~AgQKGTGkWt~~~Aldl----GvP~t~I~ea  284 (473)
T COG0362         246 GGKPLVDKILDKAGQKGTGKWTVISALDL----GVPLTLITEA  284 (473)
T ss_pred             cCCchHHHHHHHhcCCCcchhhHHHHHHc----CCCcHHHHHH
Confidence            33 2233332111      4566778888    9999876543

>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=99.73  E-value=7.1e-18  Score=146.32  Aligned_cols=185  Identities=15%  Similarity=0.148  Sum_probs=149.3

Q ss_pred             CCCCCEEEecCC-CCHHHHHHHHHHHHhcCCcEEEecCC--CChHHh-----hccceeEEecCCHHhHHHHHHHHHHhcc
Q 044696           11 LNPGAVYVDTTS-SHPALAREIFKVARERDCWAVDAPVS--GGDIGA-----RDGKLAIFAAGDSAVVQWLTPLFEVLGK   82 (220)
Q Consensus        11 ~~~g~~ivd~ST-~~p~~~~~la~~~~~~G~~~ldapV~--g~~~~a-----~~g~l~i~~gG~~~~~~~~~~~l~~~~~   82 (220)
                      +.+++++|++|+ ++|++.+.+++.+..   +|.++||.  ++|..+     +.+++++++|++.+.+++++++|+.++.
T Consensus        72 ~~~~~ivi~~s~gi~~~~~~~~s~~~~~---~~~~~~v~~i~gp~~a~ei~~~~~~~~~~ag~~~~~~~~v~~ll~~~~~  148 (308)
T PRK14619         72 LPPETIIVTATKGLDPETTRTPSQIWQA---AFPNHPVVVLSGPNLSKEIQQGLPAATVVASRDLAAAETVQQIFSSERF  148 (308)
T ss_pred             CCCCcEEEEeCCcccCCCCcCHHHHHHH---HcCCCceEEEECCCcHHHHhcCCCeEEEEEeCCHHHHHHHHHHhCCCcE
Confidence            567899999998 889888888877754   47788984  454433     2258899999999999999999999987


Q ss_pred             -ceecCC-----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhh
Q 044696           83 -PTFMGG-----------------AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELY  144 (220)
Q Consensus        83 -~~~~G~-----------------~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~  144 (220)
                       +++.++                 .|.+..+|+.+|........++.|++.++++.|++++.++++ . +.+.++.   .
T Consensus       149 ~~~~~~d~~G~~~~~alkNv~ai~~G~~~~~~l~~N~~~a~~~~~~~E~~~l~~~~G~~~~t~~~~-~-g~gd~~~---t  223 (308)
T PRK14619        149 RVYTNSDPLGTELGGTLKNVIAIAAGVCDGLQLGTNAKAALVTRALPEMIRVGTHLGAQTETFYGL-S-GLGDLLA---T  223 (308)
T ss_pred             EEEecCCchhhhhHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHHHHHhCCCccccccc-c-chhhhhe---e
Confidence             885555                 223455569999999999999999999999999999999984 3 4455444   3


Q ss_pred             hhhhccccCCCCchhhHH----------------HHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChH
Q 044696          145 GERMIEKDFRPGGFAEYM----------------VKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQ  208 (220)
Q Consensus       145 ~~~~~~~~~~~~f~~~~~----------------~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~  208 (220)
                      .+.+.+++|.++|.+...                .||++++.+++++.    |+++|+...+.++|       +++.+..
T Consensus       224 ~~~~~~rn~~~g~~l~~g~~~~~~~~~~~~~~eG~~~~~~~~~~~~~~----~~~~Pl~~~v~~i~-------~~~~~~~  292 (308)
T PRK14619        224 CTSPLSRNYQVGYGLAQGKSLEQILAELEGTAEGVNTANVLVQLAQQQ----NIAVPITEQVYRLL-------QGEITPQ  292 (308)
T ss_pred             ecCCCCccHHHHHHHHCCCCHHHHHHhcCCEeecHHHHHHHHHHHHHc----CCCCCHHHHHHHHH-------cCCCCHH
Confidence            467778888888888877                99999999999999    99999999999998       4666776


Q ss_pred             HHHHHH
Q 044696          209 GLVSVI  214 (220)
Q Consensus       209 av~~~~  214 (220)
                      .+++.+
T Consensus       293 ~~~~~l  298 (308)
T PRK14619        293 QALEEL  298 (308)
T ss_pred             HHHHHH
Confidence            666554

>PRK12557 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein; Provisional

Probab=99.64  E-value=5e-15  Score=130.11  Aligned_cols=123  Identities=16%  Similarity=0.142  Sum_probs=104.6

Q ss_pred             chhhcCCCCCEEEecCCCCHHHH-HHHHHHHH----hcCCcEEE-ecCCCChHHhhccceeEEecC--------CHHhHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALA-REIFKVAR----ERDCWAVD-APVSGGDIGARDGKLAIFAAG--------DSAVVQ   71 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~-~~la~~~~----~~G~~~ld-apV~g~~~~a~~g~l~i~~gG--------~~~~~~   71 (220)
                      ++.+++++|++|||+||++|... +.+.+++.    ..|+.+.+ +||.|+    +.+.+.+|+||        +++.++
T Consensus       101 ~L~~~L~~g~IVId~ST~~~~~~s~~l~~~l~~~~~~~gi~~~~p~~v~Ga----e~g~l~Vm~gg~t~~~~~~~~e~~e  176 (342)
T PRK12557        101 NILPHLPENAVICNTCTVSPVVLYYSLEGELRTKRKDVGISSMHPAAVPGT----PQHGHYVIAGKTTNGTELATEEQIE  176 (342)
T ss_pred             HHHhhCCCCCEEEEecCCCHHHHHHHHHHHhcccccccCeeecCCcccccc----ccchheEEeCCCcccccCCCHHHHH
Confidence            57788899999999999999988 77777775    45776664 334444    56677888877        899999


Q ss_pred             HHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Q 044696           72 WLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKG  133 (220)
Q Consensus        72 ~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~  133 (220)
                      +++|+|+.++. +++++ +|.++.+|+++|++.+.++++++|++.++++.|.++.++++-+..
T Consensus       177 ~v~~LL~a~G~~v~~~~-~g~~~~vk~~~n~l~av~~a~~aE~~~l~~~~~~~p~~~~~~~~~  238 (342)
T PRK12557        177 KCVELAESIGKEPYVVP-ADVVSAVADMGSLVTAVALSGVLDYYSVGTKIIKAPKEMIEKQIL  238 (342)
T ss_pred             HHHHHHHHcCCEEEEeC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence            99999999999 86666 699999999999999999999999999999999999999887643

>KOG2653 consensus 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=99.60  E-value=1.2e-14  Score=125.27  Aligned_cols=179  Identities=18%  Similarity=0.206  Sum_probs=142.5

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc----
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG----   81 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~----   81 (220)
                      .+.+.+.+|.+|||-.......+.+..+++.++|+-||-+.||||..+|+.|. .+|.||+.++|..++++|+.++    
T Consensus        90 ~L~p~LekgDiIIDGGNs~y~dT~RR~~el~k~GilfvG~GVSGGEEGAR~GP-SlMpGg~~~Awp~ik~ifq~iaakv~  168 (487)
T KOG2653|consen   90 ELVPYLEKGDIIIDGGNSEYQDTERRCRELAKKGILFVGSGVSGGEEGARYGP-SLMPGGSKEAWPHIKDIFQKIAAKVS  168 (487)
T ss_pred             HHHhhcCCCCEEEeCCcccCcchHHHHHHHHhcCcEEEecCccCcccccccCC-ccCCCCChHHHHHHHHHHHHHHHHhc
Confidence            57788999999999999999888888889999999999999999999999998 8899999999999999999885    


Q ss_pred             ---c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHhccC---CChHHHHhhhhhhccccC
Q 044696           82 ---K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAVKGGA---AGSMAMELYGERMIEKDF  153 (220)
Q Consensus        82 ---~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l~~~~---~~s~~~~~~~~~~~~~~~  153 (220)
                         + +.|+|+-|+|+.+||++|-+.++-|+.++|+..+.++ .|++.+++.+++..+-   ..|++++-...-+.=+|-
T Consensus       169 ~~epCc~wvG~~GaGhfVKMVHNGIEYGDMqLI~EaY~vlk~~~gls~~eia~vF~~WN~geleSfLieIT~dIlk~~d~  248 (487)
T KOG2653|consen  169 DGEPCCDWVGEGGAGHFVKMVHNGIEYGDMQLICEAYDVLKSVLGLSNDEIAEVFDDWNKGELESFLIEITADILKFKDE  248 (487)
T ss_pred             CCCCCeeeecCCCCccchhhhccCcccchHHHHHHHHHHHHHhcCCcHHHHHHHHHhhcccchhHHHHHHhHHHhheecc
Confidence               3 6899999999999999999999999999999999999 9999999999987642   345555544332221111


Q ss_pred             CCCchh-hHH-----HHHH-HHHHHHHhhcccCCCCCccHHHHH
Q 044696          154 RPGGFA-EYM-----VKDM-GMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       154 ~~~f~~-~~~-----~KD~-~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                      + +-.+ +-.     .|.. ......+-+.    |+|.|+...+
T Consensus       249 ~-G~~lv~kI~D~aGqKGTGkwt~~~Ale~----g~Pv~lI~ea  287 (487)
T KOG2653|consen  249 D-GKPLVDKILDKAGQKGTGKWTVISALEL----GVPVTLIGEA  287 (487)
T ss_pred             C-CChHHHHHHhhhcCCCccHHHHHHHHHh----CCChHHHHHH
Confidence            1 1111 111     1111 3456677788    9998876544

>PRK08229 2-dehydropantoate 2-reductase; Provisional

Probab=99.52  E-value=1.5e-13  Score=120.40  Aligned_cols=185  Identities=18%  Similarity=0.084  Sum_probs=139.3

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEec-----CCCChHHhh---ccceeEEecCCHHhHHHHHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAP-----VSGGDIGAR---DGKLAIFAAGDSAVVQWLTPLFE   78 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldap-----V~g~~~~a~---~g~l~i~~gG~~~~~~~~~~~l~   78 (220)
                      +.+.+.++++||++++ .+...+.+.+.+.+  .++++++     ++++|..+.   .|++.+.   +.+.++++.++|+
T Consensus        93 l~~~~~~~~iii~~~n-G~~~~~~l~~~~~~--~~~~~g~~~~~~~~~~pg~~~~~~~g~l~~~---~~~~~~~~~~~l~  166 (341)
T PRK08229         93 LAGHARPGAVVVSFQN-GVRNADVLRAALPG--ATVLAGMVPFNVISRGPGAFHQGTSGALAIE---ASPALRPFAAAFA  166 (341)
T ss_pred             HHhhCCCCCEEEEeCC-CCCcHHHHHHhCCC--CcEEEEEEEEEEEecCCceEEecCCCceEec---CCchHHHHHHHHH
Confidence            4556678888888854 56656667766643  4577763     354544433   5665443   3456789999999


Q ss_pred             Hhcc-ceecCCCCHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHcCCCHHHHHHHHhcc---
Q 044696           79 VLGK-PTFMGGAGCGQSCKIANQIVVGAN--------------------LLGLSEGLVFADEAGLDVRKWRDAVKGG---  134 (220)
Q Consensus        79 ~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~--------------------~~~~aEa~~la~~~Gl~~~~~~~~l~~~---  134 (220)
                      ..+. +.+.++++.++..|+++|++...+                    ..++.|++.++++.|++++.+.++...+   
T Consensus       167 ~~g~~~~~~~di~~~~w~Kl~~N~~~~~~al~~~~~~~l~~~~~~~~~~~~~~~E~~~va~a~Gi~~~~~~~~~~~~~~~  246 (341)
T PRK08229        167 RAGLPLVTHEDMRAVQWAKLLLNLNNAVNALSGLPLKEELAQRSYRRCLALAQREALRVLKAAGIRPARLTPLPPAWIPR  246 (341)
T ss_pred             hcCCCceecchhHHHHHHHHHHHhccHHHHHhCCchHHHhcCchHHHHHHHHHHHHHHHHHHcCCCccccCCCChhhhhh
Confidence            9888 999999999999999999754444                    3789999999999999988765554433   


Q ss_pred             --CCChHHHHhhhhhhccccCCCCchhhHHHHHHH------------HHHHHHhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696          135 --AAGSMAMELYGERMIEKDFRPGGFAEYMVKDMG------------MGVDVVEESEDERVVVLPGAALGKQLFSAMVAN  200 (220)
Q Consensus       135 --~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~------------~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~  200 (220)
                        ...++.++...+++.+.++.+   ...|.||+.            .+++.+++.    |+++|..+.+.++++.+.+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~---~~Sm~~D~~~~r~tEi~~i~G~i~~~a~~~----gv~~P~~~~~~~~~~~~~~~  319 (341)
T PRK08229        247 LLRLPDPLFRRLAGRMLAIDPLA---RSSMSDDLAAGRATEIDWINGEIVRLAGRL----GAPAPVNARLCALVHEAERA  319 (341)
T ss_pred             hhcCChHHHHHHHHHhhccCCcc---CchHHHHHHcCCcchHHHHhhHHHHHHHHc----CCCCcHHHHHHHHHHHHHhC
Confidence              245667777777777766543   346999999            799999999    99999999999999999888


Q ss_pred             CCCC
Q 044696          201 GDGK  204 (220)
Q Consensus       201 G~g~  204 (220)
                      |...
T Consensus       320 ~~~~  323 (341)
T PRK08229        320 GARP  323 (341)
T ss_pred             CCcC
Confidence            7544

>PRK07679 pyrroline-5-carboxylate reductase; Reviewed

Probab=99.30  E-value=1.7e-11  Score=104.88  Aligned_cols=165  Identities=15%  Similarity=0.195  Sum_probs=124.0

Q ss_pred             chhhcCCCCCEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCC---hHHhhccceeEEecCC---HHhHHHHHHHHH
Q 044696            6 GIVSALNPGAVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGG---DIGARDGKLAIFAAGD---SAVVQWLTPLFE   78 (220)
Q Consensus         6 gi~~~~~~g~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~---~~~a~~g~l~i~~gG~---~~~~~~~~~~l~   78 (220)
                      ++.+.+.++++||++ +++++++.+++.    ..     ++||+++   ++.+..+.++++++|+   ++.++.++++|+
T Consensus        84 ~l~~~~~~~~liIs~~aGi~~~~l~~~~----~~-----~~~v~r~mPn~~~~~~~~~t~~~~~~~~~~~~~~~v~~l~~  154 (279)
T PRK07679         84 PFKEYIHNNQLIISLLAGVSTHSIRNLL----QK-----DVPIIRAMPNTSAAILKSATAISPSKHATAEHIQTAKALFE  154 (279)
T ss_pred             HHHhhcCCCCEEEEECCCCCHHHHHHHc----CC-----CCeEEEECCCHHHHHhcccEEEeeCCCCCHHHHHHHHHHHH
Confidence            344556788999996 999999888743    12     3788887   4577778889999987   568899999999


Q ss_pred             Hhcc-ce------e--cCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHHHHhccCCCh-HHHH--hhh
Q 044696           79 VLGK-PT------F--MGGAGCGQSCKIANQIVVGANLLGLSEGLV-FADEAGLDVRKWRDAVKGGAAGS-MAME--LYG  145 (220)
Q Consensus        79 ~~~~-~~------~--~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~-la~~~Gl~~~~~~~~l~~~~~~s-~~~~--~~~  145 (220)
                      .+|. ++      |  +|..|+|.++           +..+.|++. .+++.|+|+++..+++..+...+ .++.  .+.
T Consensus       155 ~~G~~~~v~e~~~~~~~a~~Gsgpa~-----------~~~~~eal~e~~~~~Gl~~~~a~~~~~~~~~gsa~~~~~~~~~  223 (279)
T PRK07679        155 TIGLVSVVEEEDMHAVTALSGSGPAY-----------IYYVVEAMEKAAKKIGLKEDVAKSLILQTMIGAAEMLKASEKH  223 (279)
T ss_pred             hCCcEEEeCHHHhhhHHHhhcCHHHH-----------HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            9999 76      6  6777887773           334445554 58999999999999998855333 5554  467


Q ss_pred             hhhccccC-CCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCC
Q 044696          146 ERMIEKDF-RPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG  201 (220)
Q Consensus       146 ~~~~~~~~-~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G  201 (220)
                      |..+.+++ +|+|+....       ++..++.    |+.--+.+++.+-++++.+.|
T Consensus       224 ~~~l~~~v~spgg~t~~g-------l~~l~~~----~~~~~i~~a~~~a~~r~~~l~  269 (279)
T PRK07679        224 PSILRKEITSPGGTTEAG-------IEVLQEH----RFQQALISCITQATQRSHNLG  269 (279)
T ss_pred             HHHHHHhcCCCchHHHHH-------HHHHHHC----ChHHHHHHHHHHHHHHHHHHH
Confidence            78888888 678865554       4445566    888888888888888887765

>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated

Probab=99.24  E-value=1.4e-10  Score=106.95  Aligned_cols=115  Identities=12%  Similarity=0.101  Sum_probs=98.3

Q ss_pred             CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCC---HHhHHHHHHHHHHhcc-ceecC
Q 044696           12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGD---SAVVQWLTPLFEVLGK-PTFMG   87 (220)
Q Consensus        12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~---~~~~~~~~~~l~~~~~-~~~~G   87 (220)
                      .++.+||++||+++..+ ++++.+..++..+++.|+...    .-+.|+.+++|+   ++++++++++|+.+|+ +++++
T Consensus       106 ~~~~~iI~SsTsgi~~s-~l~~~~~~~~r~~~~hP~nP~----~~~~Lvevv~g~~t~~e~~~~~~~~~~~lG~~~v~~~  180 (495)
T PRK07531        106 ARPDALIGSSTSGFLPS-DLQEGMTHPERLFVAHPYNPV----YLLPLVELVGGGKTSPETIRRAKEILREIGMKPVHIA  180 (495)
T ss_pred             CCCCcEEEEcCCCCCHH-HHHhhcCCcceEEEEecCCCc----ccCceEEEcCCCCCCHHHHHHHHHHHHHcCCEEEeec
Confidence            34456899999998865 778888888889999998732    245789999998   6899999999999999 99998


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHcCCCHHHHHHHHhccCCChH
Q 044696           88 GAGCGQSCKIANQIVVGANLLGL-SEGLVFADEAGLDVRKWRDAVKGGAAGSM  139 (220)
Q Consensus        88 ~~G~a~~~Kl~~n~~~~~~~~~~-aEa~~la~~~Gl~~~~~~~~l~~~~~~s~  139 (220)
                              |.++|++...++.++ .|++.++++.|+|++++.++++.+.+.+|
T Consensus       181 --------k~~~gfi~nrl~~a~~~EA~~L~~~g~~s~~~id~~~~~g~g~~~  225 (495)
T PRK07531        181 --------KEIDAFVGDRLLEALWREALWLVKDGIATTEEIDDVIRYSFGLRW  225 (495)
T ss_pred             --------CCCcchhHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhccCCCc
Confidence                    688899998888885 99999999999999999999998876654

>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated

Probab=99.12  E-value=5.8e-10  Score=102.99  Aligned_cols=106  Identities=21%  Similarity=0.232  Sum_probs=87.3

Q ss_pred             hcCCCCCEE-EecCCCCHHHHHHHHHHHHh----cCCcEEE-ecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHH
Q 044696            9 SALNPGAVY-VDTTSSHPALAREIFKVARE----RDCWAVD-APVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEV   79 (220)
Q Consensus         9 ~~~~~g~~i-vd~ST~~p~~~~~la~~~~~----~G~~~ld-apV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~   79 (220)
                      ..+++++++ .|+||++|+   ++++.+..    .|.||++ +|++         +|+.+++|   +++++++++++++.
T Consensus       110 ~~~~~~ailasntStl~i~---~la~~~~~p~r~~G~hff~Pa~v~---------~LvEvv~g~~Ts~~~~~~~~~l~~~  177 (507)
T PRK08268        110 AIVSPDCILATNTSSLSIT---AIAAALKHPERVAGLHFFNPVPLM---------KLVEVVSGLATDPAVADALYALARA  177 (507)
T ss_pred             hhCCCCcEEEECCCCCCHH---HHHhhcCCcccEEEEeecCCcccC---------eeEEEeCCCCCCHHHHHHHHHHHHH
Confidence            345678888 499999997   45555543    4999999 9999         58999986   88999999999999


Q ss_pred             hcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696           80 LGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA  135 (220)
Q Consensus        80 ~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~  135 (220)
                      +++ ++++|+ +|.      ++|-++.   ..+.|++.++++.|++++++-+++..+.
T Consensus       178 lgk~pv~v~d~pGf------i~Nrll~---~~~~Ea~~l~~~g~~~~~~iD~al~~~~  226 (507)
T PRK08268        178 WGKTPVRAKDTPGF------IVNRAAR---PYYTEALRVLEEGVADPATIDAILREAA  226 (507)
T ss_pred             cCCceEEecCCCCh------HHHHHHH---HHHHHHHHHHHcCCCCHHHHHHHHHhcC
Confidence            999 999997 783      5555543   4899999999999999999999997644

>PLN02353 probable UDP-glucose 6-dehydrogenase

Probab=99.09  E-value=7.4e-09  Score=94.79  Aligned_cols=174  Identities=14%  Similarity=0.071  Sum_probs=130.9

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc--C--CcEEEecCC--CChHHhhcccee-EEecCCH-----HhHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARER--D--CWAVDAPVS--GGDIGARDGKLA-IFAAGDS-----AVVQWLT   74 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~--G--~~~ldapV~--g~~~~a~~g~l~-i~~gG~~-----~~~~~~~   74 (220)
                      |.+.+++|++||.-||+.|.+++++.+.+.++  |  .++.-+|-.  -|..--.--+.. +++||..     ++.++++
T Consensus       113 i~~~l~~~~lVv~~STvp~Gtt~~~~~~l~~~~~g~~f~v~~~PErl~~G~a~~d~~~p~riViG~~~~~~~~~a~~~~~  192 (473)
T PLN02353        113 IADVSKSDKIVVEKSTVPVKTAEAIEKILTHNSKGINFQILSNPEFLAEGTAIEDLFKPDRVLIGGRETPEGQKAVQALK  192 (473)
T ss_pred             HHhhCCCCcEEEEeCCCCCChHHHHHHHHHhhCCCCCeEEEECCCccCCCCcccccCCCCEEEEccCCchhhHHHHHHHH
Confidence            56678899999999999999999999888764  4  346777843  232222222333 5569852     3567788


Q ss_pred             HHHHHhcc--ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcccc
Q 044696           75 PLFEVLGK--PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKD  152 (220)
Q Consensus        75 ~~l~~~~~--~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~  152 (220)
                      .++..+.+  ++.+.++-.|...|++.|.+....++.+.|...+|++.|+|..++.+.+...+-.+       +....  
T Consensus       193 ~lY~~~~~~~~i~~~s~~~AE~~K~~eN~~ra~~Iaf~NEla~lce~~giD~~eV~~~~~~d~rig-------~~~l~--  263 (473)
T PLN02353        193 DVYAHWVPEERIITTNLWSAELSKLAANAFLAQRISSVNAMSALCEATGADVSQVSHAVGKDSRIG-------PKFLN--  263 (473)
T ss_pred             HHHHHhhcCCCEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhCCCCcCC-------CCCCC--
Confidence            88888763  66778889999999999999999999999999999999999999998887643111       11111  


Q ss_pred             CCCCchhhHHHHHHHHHHHHHhhcccCCCCC--ccHHHHHHHH
Q 044696          153 FRPGGFAEYMVKDMGMGVDVVEESEDERVVV--LPGAALGKQL  193 (220)
Q Consensus       153 ~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~--~p~~~~~~~~  193 (220)
                      --++|.-.++.||.......+++.    |++  +++...+.+.
T Consensus       264 PG~G~GG~ClpkD~~~L~~~a~~~----g~~~~~~l~~~~~~i  302 (473)
T PLN02353        264 ASVGFGGSCFQKDILNLVYICECN----GLPEVAEYWKQVIKM  302 (473)
T ss_pred             CCCCCCCcchhhhHHHHHHHHHHc----CCchHHHHHHHHHHH
Confidence            013567778999999999999999    988  7777666543

>PRK08507 prephenate dehydrogenase; Validated

Probab=99.02  E-value=4.4e-08  Score=83.68  Aligned_cols=119  Identities=16%  Similarity=0.233  Sum_probs=91.7

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCC----hHHhh----ccceeEEec---CCHHhHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGG----DIGAR----DGKLAIFAA---GDSAVVQWLT   74 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~----~~~a~----~g~l~i~~g---G~~~~~~~~~   74 (220)
                      +.+ +.++++|+|++|+.+...+.+.+.   .+.+|+.+ |+.|+    |..+.    .|...++++   ++++.+++++
T Consensus        78 l~~-l~~~~iv~d~gs~k~~i~~~~~~~---~~~~~v~~hPmaG~e~~Gp~~a~~~l~~g~~~il~~~~~~~~~~~~~v~  153 (275)
T PRK08507         78 LLD-IKENTTIIDLGSTKAKIIESVPKH---IRKNFIAAHPMAGTENSGPKAAIKGLYEGKVVVLCDVEKSGEKHQERAK  153 (275)
T ss_pred             Hhc-cCCCCEEEECccchHHHHHHHHHh---cCCCEEecCCcCcCchhhHHhccHHHhCCCeEEEecCCCCCHHHHHHHH
Confidence            455 678999999999988877766554   24679999 99884    65443    678888886   4667889999


Q ss_pred             HHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc
Q 044696           75 PLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG  134 (220)
Q Consensus        75 ~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~  134 (220)
                      ++|+.+|. ++++++.+....+|+++|+.. ....++++++.    .+.+.+.+.++...+
T Consensus       154 ~l~~~~G~~~~~~~~~~hD~~~a~vs~lph-~~a~~l~~~~~----~~~~~~~~~~~~~~g  209 (275)
T PRK08507        154 EIFSGLGMRIVYMDAKEHDLHAAYISHLPH-IISFALANTVL----KEEDERNIFDLAGGG  209 (275)
T ss_pred             HHHHHhCCEEEEeCHHHHHHHHHHHhHHHH-HHHHHHHHHHH----hcCChHHHHhhcccc
Confidence            99999999 999999999999999999865 55666666662    366766666665543

>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional

Probab=98.94  E-value=3.6e-08  Score=87.89  Aligned_cols=115  Identities=18%  Similarity=0.291  Sum_probs=97.6

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEE-EecCCCChHHhhccceeEEecC-CHHhHHHHHHHHHHhcc-c
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAV-DAPVSGGDIGARDGKLAIFAAG-DSAVVQWLTPLFEVLGK-P   83 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~l-dapV~g~~~~a~~g~l~i~~gG-~~~~~~~~~~~l~~~~~-~   83 (220)
                      +.+ +++|++|+|+||+.+...+++.+...   ..|| ..|+.|+....-.+.+.+++.| +++++++++++++.+|. +
T Consensus       162 l~~-l~~~~iv~Dv~SvK~~~~~~~~~~~~---~~fvg~HPm~G~~~~~~~~~~vv~~~~~~~~~~~~~~~l~~~lG~~v  237 (374)
T PRK11199        162 LPP-LPEDCILVDLTSVKNAPLQAMLAAHS---GPVLGLHPMFGPDVGSLAKQVVVVCDGRQPEAYQWLLEQIQVWGARL  237 (374)
T ss_pred             HhC-CCCCcEEEECCCccHHHHHHHHHhCC---CCEEeeCCCCCCCCcccCCCEEEEcCCCCchHHHHHHHHHHHCCCEE
Confidence            445 78999999999999988888876542   2688 9999998777778888888888 55788999999999999 9


Q ss_pred             eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 044696           84 TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRD  129 (220)
Q Consensus        84 ~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~  129 (220)
                      +++++.+....+++++. +  .++.+++++..+++ .+++.+.+++
T Consensus       238 ~~~~~~~HD~~~a~vsh-L--pH~~a~al~~~l~~-~~~~~~~~~~  279 (374)
T PRK11199        238 HRISAVEHDQNMAFIQA-L--RHFATFAYGLHLAK-ENVDLEQLLA  279 (374)
T ss_pred             EECCHHHHHHHHHHHHH-H--HHHHHHHHHHHHHH-cCCCHHHHHH
Confidence            99999999999999983 3  88999999999988 8888877654

>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC

Probab=98.94  E-value=4.5e-09  Score=97.00  Aligned_cols=108  Identities=21%  Similarity=0.203  Sum_probs=85.1

Q ss_pred             cCCCCCEEE-ecCCCCHHH-HHHHHHHHHhcCCcEEE-ecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhcc-
Q 044696           10 ALNPGAVYV-DTTSSHPAL-AREIFKVARERDCWAVD-APVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGK-   82 (220)
Q Consensus        10 ~~~~g~~iv-d~ST~~p~~-~~~la~~~~~~G~~~ld-apV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~-   82 (220)
                      .++++.++. |+||.+++. +..+....+..|.||++ +|++         .|+.+++|   ++++++++.++++.+++ 
T Consensus       109 ~~~~~~IlasnTStl~i~~iA~~~~~p~r~~G~HFf~Papv~---------~LvEvv~g~~Ts~e~~~~~~~l~~~lgk~  179 (503)
T TIGR02279       109 LCPADTIIASNTSSLSITAIAAGLARPERVAGLHFFNPAPVM---------ALVEVVSGLATAAEVAEQLYETALAWGKQ  179 (503)
T ss_pred             hCCCCeEEEECCCCCCHHHHHHhcCcccceEEEeccCccccC---------ceEEEeCCCCCCHHHHHHHHHHHHHcCCe
Confidence            344455444 777777763 44444444567999999 9999         38999999   99999999999999999 


Q ss_pred             ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696           83 PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA  135 (220)
Q Consensus        83 ~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~  135 (220)
                      ++++|+ +|.     ++|+++    ...+.|++.+.++.+++++++-++++.+.
T Consensus       180 pv~v~d~pGf-----i~Nrl~----~~~~~EA~~l~e~g~a~~~~ID~al~~~~  224 (503)
T TIGR02279       180 PVHCHSTPGF-----IVNRVA----RPYYAEALRALEEQVAAPAVLDAALRDGA  224 (503)
T ss_pred             eeEeCCCCCc-----HHHHHH----HHHHHHHHHHHHcCCCCHHHHHHHHHhcC
Confidence            999997 785     444444    35999999999999999999999998644

This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.

>PLN02688 pyrroline-5-carboxylate reductase

Probab=98.93  E-value=1.3e-08  Score=86.28  Aligned_cols=170  Identities=16%  Similarity=0.110  Sum_probs=112.7

Q ss_pred             chhhcCCCCCEEEec-CCCCHHHHHHHHHHHHhcCCcEEE-ecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhccc
Q 044696            6 GIVSALNPGAVYVDT-TSSHPALAREIFKVARERDCWAVD-APVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKP   83 (220)
Q Consensus         6 gi~~~~~~g~~ivd~-ST~~p~~~~~la~~~~~~G~~~ld-apV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~~   83 (220)
                      ++.+.++++++||.+ ++++++..+   ++...+  +++. .|..+...+.....++...+++++.+++++++|+.+|.+
T Consensus        80 ~l~~~~~~~~~iIs~~~g~~~~~l~---~~~~~~--~vvr~mP~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~~G~~  154 (266)
T PLN02688         80 ELRPLLSKDKLLVSVAAGITLADLQ---EWAGGR--RVVRVMPNTPCLVGEAASVMSLGPAATADDRDLVATLFGAVGKI  154 (266)
T ss_pred             HHHhhcCCCCEEEEecCCCcHHHHH---HHcCCC--CEEEECCCcHHHHhCceEEEEeCCCCCHHHHHHHHHHHHhCCCE
Confidence            344566789988876 555555544   222221  6774 676665544433333333345889999999999999996


Q ss_pred             eecC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHH-h--hhhh-hcc
Q 044696           84 TFMG---------GAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAME-L--YGER-MIE  150 (220)
Q Consensus        84 ~~~G---------~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~-~--~~~~-~~~  150 (220)
                      +|++         ..|+|.++       ++.++.+++|+   +++.|+|+++..+++..+...++.+- .  .-|. +.+
T Consensus       155 ~~~~e~~~d~~~~~~g~g~a~-------~~~~~~a~~ea---~~~~Gl~~~~a~~~~~~~~~gs~~l~~~~~~~~~~l~~  224 (266)
T PLN02688        155 WVVDEKLLDAVTGLSGSGPAY-------IFLAIEALADG---GVAAGLPRDVALSLAAQTVLGAAKMVLETGKHPGQLKD  224 (266)
T ss_pred             EEeCHHHcchhHhhhcCHHHH-------HHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence            6764         46776664       66788888888   89999999999999988765555432 1  1111 111


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCC
Q 044696          151 KDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG  201 (220)
Q Consensus       151 ~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G  201 (220)
                      .--+|+-       -....++..++.    |++-.+.+++.+.++++.+.+
T Consensus       225 ~v~spgG-------~t~~~l~~l~~~----g~~~~~~~a~~~~~~r~~~~~  264 (266)
T PLN02688        225 MVTSPGG-------TTIAGVHELEKG----GFRAALMNAVVAAAKRSRELS  264 (266)
T ss_pred             hCCCCch-------HHHHHHHHHHHC----ChHHHHHHHHHHHHHHHHHhc
Confidence            1112221       125566777788    999999999999999998865

>PRK08269 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.91  E-value=3.6e-09  Score=92.22  Aligned_cols=108  Identities=24%  Similarity=0.350  Sum_probs=91.9

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHH----HhcCCcEEEec-------CCCChHHhhccceeEEecCCHHhHHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVA----RERDCWAVDAP-------VSGGDIGARDGKLAIFAAGDSAVVQWLTP   75 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~----~~~G~~~ldap-------V~g~~~~a~~g~l~i~~gG~~~~~~~~~~   75 (220)
                      +.+.+++++++  +||+|+-...++++.+    +-.|.||++.|       |++++            ++++++++++++
T Consensus       101 l~~~~~~~~il--aSntS~~~~~~la~~~~~p~r~~g~Hf~~Pp~~~~lvEVv~g~------------~t~~e~~~~~~~  166 (314)
T PRK08269        101 LGRHVDADAII--ASTTSTFLVTDLQRHVAHPERFLNAHWLNPAYLMPLVEVSPSD------------ATDPAVVDRLAA  166 (314)
T ss_pred             HHhhCCCCcEE--EEccccCCHHHHHhhcCCcccEEEEecCCccccCceEEEeCCC------------CCCHHHHHHHHH
Confidence            44567778777  8999999999999988    45799999999       88877            789999999999


Q ss_pred             HHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCC
Q 044696           76 LFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAA  136 (220)
Q Consensus        76 ~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~  136 (220)
                      +++.+|+ ++++|+.+ |       +++.......+.|++.++++.+++++++.+++..+.+
T Consensus       167 ll~~lGk~~v~v~d~~-G-------fi~nri~~~~l~EAl~l~e~g~~~~e~iD~a~~~g~G  220 (314)
T PRK08269        167 LLERIGKVPVVCGPSP-G-------YIVPRIQALAMNEAARMVEEGVASAEDIDKAIRTGFG  220 (314)
T ss_pred             HHHHcCCcEEEecCCC-C-------cchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCC
Confidence            9999999 99999843 2       3566677889999999999999999999999986654

>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=98.87  E-value=1.1e-07  Score=84.02  Aligned_cols=176  Identities=16%  Similarity=0.099  Sum_probs=135.4

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccce--------eEEecCCHH-hHHHHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKL--------AIFAAGDSA-VVQWLTPLF   77 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l--------~i~~gG~~~-~~~~~~~~l   77 (220)
                      +.++++..++||.-||+.|.+++++.+.+.+....= |--|.-.|.--+.|+.        -+.+|...+ +.+..+.++
T Consensus       106 i~~~~~~~~vvV~KSTVPvGt~~~v~~~i~~~~~~~-~f~v~~NPEFLREG~Av~D~~~PdRIViG~~~~~a~~~~~ely  184 (414)
T COG1004         106 IGEILDGKAVVVIKSTVPVGTTEEVRAKIREENSGK-DFEVASNPEFLREGSAVYDFLYPDRIVIGVRSERAAAVLRELY  184 (414)
T ss_pred             HHhhcCCCeEEEEcCCCCCCchHHHHHHHHhhcccC-CceEecChHHhcCcchhhhccCCCeEEEccCChhHHHHHHHHH
Confidence            556776669999999999999999999887654221 4455666666666654        478888665 467777887


Q ss_pred             HHh--cc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCC
Q 044696           78 EVL--GK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFR  154 (220)
Q Consensus        78 ~~~--~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~  154 (220)
                      +.+  .. .+.+-..-.|...|++.|.+++.=++.+.|.-.+|++.|+|..++.+-+....       +..++.++-  .
T Consensus       185 ~~~~~~~~p~l~t~~~~AE~IKyaaNafLAtKIsFiNEia~ice~~g~D~~~V~~gIGlD~-------RIG~~fl~a--G  255 (414)
T COG1004         185 APFLRQDVPILFTDLREAELIKYAANAFLATKISFINEIANICEKVGADVKQVAEGIGLDP-------RIGNHFLNA--G  255 (414)
T ss_pred             hhhhhcCCCEEEecchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHcCCCc-------hhhHhhCCC--C
Confidence            765  34 56666778899999999999999999999999999999999999998887532       111222211  1


Q ss_pred             CCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696          155 PGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA  196 (220)
Q Consensus       155 ~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~  196 (220)
                      .+|.-.++-||.+..+..+++.    |.+.+++.++.+.-++
T Consensus       256 ~GyGGsCfPKD~~AL~~~a~~~----~~~~~ll~avv~vN~~  293 (414)
T COG1004         256 FGYGGSCFPKDTKALIANAEEL----GYDPNLLEAVVEVNER  293 (414)
T ss_pred             CCCCCcCCcHhHHHHHHHHHhc----CCchHHHHHHHHHHHH
Confidence            3677889999999999999999    9999999998665443

>COG0677 WecC UDP-N-acetyl-D-mannosaminuronate dehydrogenase [Cell envelope biogenesis, outer membrane]

Probab=98.78  E-value=9.5e-08  Score=84.29  Aligned_cols=130  Identities=16%  Similarity=0.215  Sum_probs=108.0

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc--------CCcEEEec--CCCChHHhhccceeEEecCCHH-hHHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARER--------DCWAVDAP--VSGGDIGARDGKLAIFAAGDSA-VVQWLT   74 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~--------G~~~ldap--V~g~~~~a~~g~l~i~~gG~~~-~~~~~~   74 (220)
                      -|.+.+++|.++|--||+.|.+++++..++.+.        .....-+|  |.-|...-+--+..=.+||..+ ..+.+.
T Consensus       113 sIa~~L~kG~LVIlEST~~PGTTe~v~~plle~~sgL~~~~Df~laysPERv~PG~~~~el~~~~kVIgG~tp~~~e~a~  192 (436)
T COG0677         113 SIAPVLKKGDLVILESTTPPGTTEEVVKPLLEERSGLKFGEDFYLAYSPERVLPGNVLKELVNNPKVIGGVTPKCAELAA  192 (436)
T ss_pred             HHHHhcCCCCEEEEecCCCCCcHHHHHHHHHhhcCCCcccceeeEeeCccccCCCchhhhhhcCCceeecCCHHHHHHHH
Confidence            367889999999999999999999999999874        23345566  5555544444455667888655 556778


Q ss_pred             HHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696           75 PLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA  135 (220)
Q Consensus        75 ~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~  135 (220)
                      -+.+.+-. ++.+.++-.|.+.||.-|.+-..+++...|...+++++|||..+++++.+.-+
T Consensus       193 ~lY~~iv~~~~~vts~~tAEm~Kl~EN~fRdVNIALaNElali~~~~GIdvwevIeaAnt~P  254 (436)
T COG0677         193 ALYKTIVEGVIPVTSARTAEMVKLTENTFRDVNIALANELALICNAMGIDVWEVIEAANTKP  254 (436)
T ss_pred             HHHHHheEEEEEcCChHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhCCcHHHHHHHhccCC
Confidence            88888888 88899999999999999999999999999999999999999999999888754

>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.75  E-value=7.1e-08  Score=82.92  Aligned_cols=111  Identities=18%  Similarity=0.164  Sum_probs=83.9

Q ss_pred             hhhcCCCCCEE-EecCCCCHHHHHHHHHHH-HhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhc
Q 044696            7 IVSALNPGAVY-VDTTSSHPALAREIFKVA-RERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLG   81 (220)
Q Consensus         7 i~~~~~~g~~i-vd~ST~~p~~~~~la~~~-~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~   81 (220)
                      +.+.+++++++ +|+||++|++..+..+.. +..|++|+ +|+.++       +|+.|++|   +++++++++++++.++
T Consensus       103 l~~~~~~~~il~~~tSt~~~~~l~~~~~~~~r~~g~h~~-~Pv~~~-------~Lve~v~g~~t~~~~~~~~~~~l~~lg  174 (288)
T PRK09260        103 ADAHAPAECYIATNTSTMSPTEIASFTKRPERVIAMHFF-NPVHKM-------KLVELIRGLETSDETVQVAKEVAEQMG  174 (288)
T ss_pred             HHhhCCCCcEEEEcCCCCCHHHHHhhcCCcccEEEEecC-CCcccC-------ceEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence            45667888866 899999998766555432 22599999 999875       68999999   9999999999999999


Q ss_pred             c-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc
Q 044696           82 K-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG  134 (220)
Q Consensus        82 ~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~  134 (220)
                      + ++++|+ +|.      +.|=++   ...+.|++.+.+.--.+++++=..+..+
T Consensus       175 ~~~v~v~d~~Gf------~~nRl~---~~~~~ea~~~~~~gv~~~~~iD~~~~~g  220 (288)
T PRK09260        175 KETVVVNEFPGF------VTSRIS---ALVGNEAFYMLQEGVATAEDIDKAIRLG  220 (288)
T ss_pred             CeEEEecCcccH------HHHHHH---HHHHHHHHHHHHcCCCCHHHHHHHHHhC
Confidence            9 999997 773      333333   3467788888877556787776655543

>PRK08655 prephenate dehydrogenase; Provisional

Probab=98.73  E-value=1.1e-06  Score=79.98  Aligned_cols=120  Identities=13%  Similarity=0.179  Sum_probs=93.8

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhc
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLG   81 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~   81 (220)
                      .+.+.++++++|+|++|+.+...+.+.+.+. .|++|+.+ |+.|.....-.|+..+++.+   +++.+++++++|+.+|
T Consensus        77 ~l~~~l~~~~iViDvsSvK~~~~~~l~~~~~-~~~~~V~~HPmaGp~~~~~~g~~~il~p~~~~~~~~~~~v~~ll~~~G  155 (437)
T PRK08655         77 EVAPHVKEGSLLMDVTSVKERPVEAMEEYAP-EGVEILPTHPMFGPRTPSLKGQVVILTPTEKRSNPWFDKVKNFLEKEG  155 (437)
T ss_pred             HHHhhCCCCCEEEEcccccHHHHHHHHHhcC-CCCEEEEcCCCCCCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHcC
Confidence            3556678999999999999999888887754 58899999 99987666678888888876   4678899999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDA  130 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~  130 (220)
                      . ++++++.   .--|++.+.....++.+++.+..+ ++.|++.++....
T Consensus       156 ~~v~~~~~e---~HD~~~a~vs~lph~~a~al~~~l-~~~g~~~~~~~~~  201 (437)
T PRK08655        156 ARVIVTSPE---EHDRIMSVVQGLTHFAYISIASTL-KRLGVDIKESRKF  201 (437)
T ss_pred             CEEEECCHH---HHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHHHHhh
Confidence            9 8888865   335555666666777777777665 6779998775433

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=98.56  E-value=2.2e-06  Score=73.45  Aligned_cols=99  Identities=18%  Similarity=0.235  Sum_probs=78.4

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCCCh-HHhhccceeEEec----------CCHHhHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSGGD-IGARDGKLAIFAA----------GDSAVVQWL   73 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g~~-~~a~~g~l~i~~g----------G~~~~~~~~   73 (220)
                      .+.+.+.++.+|+|++|+.+...+++.+.    +.+|+. .|+.|++ .+.+.+...+|.|          ++++.++.+
T Consensus        76 ~l~~~l~~~~ii~d~~Svk~~~~~~~~~~----~~~~v~~HPm~G~~~~g~~~a~~~lf~g~~~~l~p~~~~~~~~~~~v  151 (279)
T PRK07417         76 QLIPALPPEAIVTDVGSVKAPIVEAWEKL----HPRFVGSHPMAGTAESGVEAGQRGLFKNRPWVLTPTENTDLNALAIV  151 (279)
T ss_pred             HHHHhCCCCcEEEeCcchHHHHHHHHHHh----hCCceeeCCcCCCCcchHHHhhHHHhCCCcEEEccCCCCCHHHHHHH
Confidence            45566788999999999998877655533    346898 6999986 6666666555544          578899999


Q ss_pred             HHHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHH
Q 044696           74 TPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLL  108 (220)
Q Consensus        74 ~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~  108 (220)
                      +++++.+|. ++++++.+....+|+++|+.......
T Consensus       152 ~~l~~~lG~~~v~~~~~~hD~~~a~~shlp~~~a~~  187 (279)
T PRK07417        152 EELAVSLGSKIYTADPEEHDRAVALISHLPVMVSAA  187 (279)
T ss_pred             HHHHHHcCCEEEEcCHHHHHHHHHHHcchHHHHHHH
Confidence            999999999 99999999999999999887755533

>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.42  E-value=1.4e-06  Score=75.65  Aligned_cols=107  Identities=17%  Similarity=0.146  Sum_probs=79.2

Q ss_pred             CCCCEEEecCCCCHHHHHHHHHHHHh----cCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhcc-c
Q 044696           12 NPGAVYVDTTSSHPALAREIFKVARE----RDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGK-P   83 (220)
Q Consensus        12 ~~g~~ivd~ST~~p~~~~~la~~~~~----~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~-~   83 (220)
                      .++.++|.++|.++.. .++++.+..    .|++|.+.|..        +.+..++.|   +++++++++++|+.+|. +
T Consensus       105 ~~~~~ii~s~tsg~~~-~~l~~~~~~~~~~ig~h~~~p~~~--------~~l~~i~~g~~t~~~~~~~v~~l~~~~G~~~  175 (311)
T PRK06130        105 CDPDTIFATNTSGLPI-TAIAQAVTRPERFVGTHFFTPADV--------IPLVEVVRGDKTSPQTVATTMALLRSIGKRP  175 (311)
T ss_pred             CCCCcEEEECCCCCCH-HHHHhhcCCcccEEEEccCCCCcc--------CceEEEeCCCCCCHHHHHHHHHHHHHcCCEE
Confidence            3555667677766653 366666643    25666555532        235566666   57899999999999999 9


Q ss_pred             eecCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCC
Q 044696           84 TFMGG--AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAA  136 (220)
Q Consensus        84 ~~~G~--~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~  136 (220)
                      +++++  +|.     ++||++.    ..++|++.++++.|+|++++.++++.+.+
T Consensus       176 v~~~~d~~G~-----i~nr~~~----~~~~Ea~~l~~~g~~~~~~id~~~~~~~g  221 (311)
T PRK06130        176 VLVKKDIPGF-----IANRIQH----ALAREAISLLEKGVASAEDIDEVVKWSLG  221 (311)
T ss_pred             EEEcCCCCCc-----HHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHHhcCC
Confidence            99985  565     7888754    67999999999999999999999976544

>PF00984 UDPG_MGDP_dh: UDP-glucose/GDP-mannose dehydrogenase family, central domain; InterPro: IPR014026 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=98.33  E-value=1e-05  Score=58.46  Aligned_cols=90  Identities=14%  Similarity=-0.010  Sum_probs=73.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCC--CchhhHHHHHHHH
Q 044696           91 CGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRP--GGFAEYMVKDMGM  168 (220)
Q Consensus        91 ~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~--~f~~~~~~KD~~~  168 (220)
                      .|..+|++.|.+....++.+.|...+|++.|+|..++.+.+...+..           ...-+.|  +|.-..+.||...
T Consensus         3 ~AEl~K~~~N~~~a~~iaf~Nel~~lce~~giD~~~V~~~~~~d~ri-----------~~~~~~pg~g~GG~ClpkD~~~   71 (96)
T PF00984_consen    3 EAELIKYAENAFRATKIAFANELARLCEKLGIDVYEVIEAANTDPRI-----------GPHYLRPGPGFGGSCLPKDPYA   71 (96)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSBHHHHHHHHHTSTTT-----------TSSS-S-SSS--SSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHccCccc-----------ccccCCCCCCCCCcchhhhHHH
Confidence            57899999999999999999999999999999999999999864321           1111223  5777899999999


Q ss_pred             HHHHHhhcccCCCCCccHHHHHHHHHH
Q 044696          169 GVDVVEESEDERVVVLPGAALGKQLFS  195 (220)
Q Consensus       169 ~~~~a~~~~~~~g~~~p~~~~~~~~~~  195 (220)
                      ....+++.    |.+.++++++.+..+
T Consensus        72 L~~~~~~~----g~~~~ll~~~~~~N~   94 (96)
T PF00984_consen   72 LIYLAKEL----GYPPQLLEAVININE   94 (96)
T ss_dssp             HHHHHHHT----TSHHHHHHHHHHHHH
T ss_pred             HHHHHHHc----CCCHHHHHHHHHhcC
Confidence            99999999    999999888877644

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents an alpha helical region that serves as the dimerisation interface for these enzymes [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 2O3J_A 3OJO_A 3OJL_A 3PLR_A 3PJG_A 3PID_A 3PLN_A 3PHL_A 3TDK_B 2Q3E_A ....

>PLN02545 3-hydroxybutyryl-CoA dehydrogenase

Probab=98.27  E-value=6.6e-06  Score=70.91  Aligned_cols=111  Identities=18%  Similarity=0.142  Sum_probs=82.7

Q ss_pred             hhhcCCCCCEEE-ecCCCCHHHHHHHHHH-HHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhc
Q 044696            7 IVSALNPGAVYV-DTTSSHPALAREIFKV-ARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLG   81 (220)
Q Consensus         7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~-~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~   81 (220)
                      +.+.++++++|+ |+||+++.+..+.... .+-.|+||.+.|+.+        .++.++.|   +++++++++++|+.+|
T Consensus       105 l~~~~~~~~il~s~tS~i~~~~l~~~~~~~~r~~g~h~~~pp~~~--------~lveiv~g~~t~~e~~~~~~~ll~~lG  176 (295)
T PLN02545        105 LDRICKPSAILASNTSSISITRLASATQRPQQVIGMHFMNPPPIM--------KLVEIIRGADTSDEVFDATKALAERFG  176 (295)
T ss_pred             HHhhCCCCcEEEECCCCCCHHHHHhhcCCCcceEEEeccCCcccC--------ceEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence            345577888886 9999999876655432 233589999999874        44666654   8899999999999999


Q ss_pred             c-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc
Q 044696           82 K-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG  134 (220)
Q Consensus        82 ~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~  134 (220)
                      + ++++++ +|     .++|+++.    ..+.|++.+.+.--.+++++=..+..+
T Consensus       177 ~~~~~~~d~~g-----~i~nri~~----~~~~ea~~~~~~gv~~~~~iD~~~~~g  222 (295)
T PLN02545        177 KTVVCSQDYPG-----FIVNRILM----PMINEAFYALYTGVASKEDIDTGMKLG  222 (295)
T ss_pred             CeeEEecCccc-----HHHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHHhc
Confidence            9 999997 67     35565544    358899999888778888876665543

>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=98.03  E-value=2.8e-05  Score=66.91  Aligned_cols=110  Identities=22%  Similarity=0.180  Sum_probs=78.4

Q ss_pred             chhhcCCCCCEEE-ecCCCCHHHHHHHHHHHHh----cCCcEEE-ecCCCChHHhhccceeEEecCCHHhHHHHHHHHHH
Q 044696            6 GIVSALNPGAVYV-DTTSSHPALAREIFKVARE----RDCWAVD-APVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEV   79 (220)
Q Consensus         6 gi~~~~~~g~~iv-d~ST~~p~~~~~la~~~~~----~G~~~ld-apV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~   79 (220)
                      ++.+.++++++++ ++||+++.   ++++.+..    .|+||++ +|+++...      +....+++++++++++++|+.
T Consensus       104 ~l~~~~~~~~ii~s~ts~~~~s---~la~~~~~~~r~~g~h~~~p~~~~~~ve------i~~g~~t~~~~~~~~~~~~~~  174 (292)
T PRK07530        104 QLCPVLKPEAILATNTSSISIT---RLASATDRPERFIGIHFMNPVPVMKLVE------LIRGIATDEATFEAAKEFVTK  174 (292)
T ss_pred             HHHhhCCCCcEEEEcCCCCCHH---HHHhhcCCcccEEEeeccCCcccCceEE------EeCCCCCCHHHHHHHHHHHHH
Confidence            3556678888887 88888775   46665532    3889999 66664431      222246899999999999999


Q ss_pred             hcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CHHHHHHHHhc
Q 044696           80 LGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGL-DVRKWRDAVKG  133 (220)
Q Consensus        80 ~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl-~~~~~~~~l~~  133 (220)
                      +|+ ++++++.+    -|++|+++.    ..+.|++.+.++ |+ +++++=.++..
T Consensus       175 ~gk~~v~~~d~p----g~i~nRl~~----~~~~ea~~~~~~-g~~~~~~iD~~~~~  221 (292)
T PRK07530        175 LGKTITVAEDFP----AFIVNRILL----PMINEAIYTLYE-GVGSVEAIDTAMKL  221 (292)
T ss_pred             cCCeEEEecCcC----ChHHHHHHH----HHHHHHHHHHHh-CCCCHHHHHHHHHh
Confidence            999 99998744    577787654    457788888777 54 67776656543

>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating

Probab=98.02  E-value=0.00016  Score=66.46  Aligned_cols=145  Identities=12%  Similarity=0.094  Sum_probs=106.2

Q ss_pred             HHhHHHHHHHHHHhcc---ceecCCCCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHH
Q 044696           67 SAVVQWLTPLFEVLGK---PTFMGGAGC------GQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAV  131 (220)
Q Consensus        67 ~~~~~~~~~~l~~~~~---~~~~G~~G~------a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l  131 (220)
                      .++++|..|.++..-.   ..+.|+.+.      ++.+|.+.|.+.++.+++++|++.+.++      .++|..++.+++
T Consensus       278 ~av~~R~~S~~k~~r~~~~~~~~gp~~~~~~~~~~~~i~~l~~al~~~~i~ayaQGf~ll~~as~~~~w~ldl~~ia~iW  357 (467)
T TIGR00873       278 ESVFARYLSSLKEERVAASKVLSGPLAPEPAVDKEEFIEDVRQALYASKIISYAQGFMLLREASEEYGWDLNLGEIALIW  357 (467)
T ss_pred             HHHHHHhccccHHHHHHhhcccCCCCcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHh
Confidence            3577888888876542   344566543      8999999999999999999999999988      899999999999


Q ss_pred             hccC-CChHHHHhhhhhhccc-cC-----CCCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCC
Q 044696          132 KGGA-AGSMAMELYGERMIEK-DF-----RPGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGD  202 (220)
Q Consensus       132 ~~~~-~~s~~~~~~~~~~~~~-~~-----~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~  202 (220)
                      +.+. -.|++++...+...++ +.     ++.|  .+......+|.++..+-+.    |+|+|.+..+..+|+.....- 
T Consensus       358 r~GcIIrs~lL~~i~~a~~~~~~l~~l~~~~~~~~~i~~~~~~~r~vV~~a~~~----gip~P~ls~aL~y~~~~~s~~-  432 (467)
T TIGR00873       358 RGGCIIRSGFLDKITKAFAENPDLANLLLAPYFKDALKDAQSGWRRVVALAIEY----GIPVPAFSAALSFYDGYRTAR-  432 (467)
T ss_pred             CCCceeeHhHHHHHHHHHHcCCChhhhcCCHHHHHHHHHhhHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHhhcCc-
Confidence            9877 5788887765554332 11     1112  2334455568899999999    999999999999999876632 


Q ss_pred             CCCChHHHHHHHHHhcC
Q 044696          203 GKFGTQGLVSVIERING  219 (220)
Q Consensus       203 g~~d~~av~~~~~~~~~  219 (220)
                         -...++...|+..|
T Consensus       433 ---~~~nliqaqRd~FG  446 (467)
T TIGR00873       433 ---LPANLLQAQRDYFG  446 (467)
T ss_pred             ---ccHHHHHHHHHHhc
Confidence               22345555555443

This model does not specify whether the cofactor is NADP only (EC 1.1.1.44), NAD only, or both. The model does not assign an EC number for that reason.

>PRK06476 pyrroline-5-carboxylate reductase; Reviewed

Probab=98.00  E-value=0.00026  Score=59.85  Aligned_cols=109  Identities=14%  Similarity=0.173  Sum_probs=76.6

Q ss_pred             CCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhccceecCCCC
Q 044696           11 LNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTFMGGAG   90 (220)
Q Consensus        11 ~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~~~~~G~~G   90 (220)
                      ..+|++||+++  .+-....+.+++......+.+.|..   +.+.....+.++.++    +.++++|+.+|..+++++. 
T Consensus        83 ~~~~~~vis~~--ag~~~~~l~~~~~~~~~~~r~~P~~---~~a~~~g~t~~~~~~----~~~~~l~~~lG~~~~~~~e-  152 (258)
T PRK06476         83 FRPGQTVISVI--AATDRAALLEWIGHDVKLVRAIPLP---FVAERKGVTAIYPPD----PFVAALFDALGTAVECDSE-  152 (258)
T ss_pred             cCCCCEEEEEC--CCCCHHHHHHHhCCCCCEEEECCCC---hhhhCCCCeEecCCH----HHHHHHHHhcCCcEEECCh-
Confidence            35788888744  5666677777776555678899983   333444556677664    4789999999994446643 


Q ss_pred             HHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc
Q 044696           91 CGQSCKIANQI-----VVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG  134 (220)
Q Consensus        91 ~a~~~Kl~~n~-----~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~  134 (220)
                           |..+++     +.+..+..+.++..++++.|+|+++..+++...
T Consensus       153 -----~~~d~~~a~~s~~a~~~~~~~~~~~~~~~~Gl~~~~a~~~~~~~  196 (258)
T PRK06476        153 -----EEYDLLAAASALMATYFGILETATGWLEEQGLKRQKARAYLAPL  196 (258)
T ss_pred             -----HhccceeehhccHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence                 333444     455555677788899999999999999988754

>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated

Probab=97.89  E-value=3.2e-05  Score=66.59  Aligned_cols=110  Identities=12%  Similarity=0.070  Sum_probs=80.4

Q ss_pred             hcCCCCCEEEecCCCCHHHHHHHHHHHHh----cCCcEEE-ecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-
Q 044696            9 SALNPGAVYVDTTSSHPALAREIFKVARE----RDCWAVD-APVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-   82 (220)
Q Consensus         9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~----~G~~~ld-apV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-   82 (220)
                      +.+.++++++  |+++.-...++++.+..    .|.||.+ +|+++... +..|+.+     ++++++++.++++.+|+ 
T Consensus       109 ~~~~~~~il~--S~tsg~~~~~la~~~~~~~r~ig~hf~~P~~~~~~vE-v~~g~~T-----~~e~~~~~~~~~~~lgk~  180 (291)
T PRK06035        109 RNVSPETIIA--SNTSGIMIAEIATALERKDRFIGMHWFNPAPVMKLIE-VVRAALT-----SEETFNTTVELSKKIGKI  180 (291)
T ss_pred             hhCCCCeEEE--EcCCCCCHHHHHhhcCCcccEEEEecCCCcccCccEE-EeCCCCC-----CHHHHHHHHHHHHHcCCe
Confidence            4456677665  33333355567776654    3889998 88998865 3466655     88999999999999999 


Q ss_pred             ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc
Q 044696           83 PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG  134 (220)
Q Consensus        83 ~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~  134 (220)
                      ++++++.+.....|+++|++        .|++.+.+.--.+++++=.++..+
T Consensus       181 ~v~v~d~pgfv~nRl~~~~~--------~ea~~~~~~g~a~~~~iD~~~~~~  224 (291)
T PRK06035        181 PIEVADVPGFFTTRFIEGWL--------LEAIRSFEIGIATIKDIDEMCKLA  224 (291)
T ss_pred             EEEeCCCCCeeHHHHHHHHH--------HHHHHHHHcCCCCHHHHHHHHhhc
Confidence            99999988889999999854        588888766335687776666544

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=97.85  E-value=0.0011  Score=57.47  Aligned_cols=91  Identities=22%  Similarity=0.337  Sum_probs=65.5

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCChH-Hhh-------ccceeEEe---cCCHHhHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGGDI-GAR-------DGKLAIFA---AGDSAVVQWLT   74 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~~~-~a~-------~g~l~i~~---gG~~~~~~~~~   74 (220)
                      +.+.++++.+|+|++++.+...+++.+.+. .+++|+.+ |+.|+.. +.+       .|...+++   +++++.++.++
T Consensus        86 l~~~l~~~~iv~dvgs~k~~~~~~~~~~~~-~~~~~v~~hPm~g~e~~G~~~a~~~l~~g~~~~l~~~~~~~~~~~~~~~  164 (307)
T PRK07502         86 IAPHLKPGAIVTDVGSVKASVIAAMAPHLP-EGVHFIPGHPLAGTEHSGPDAGFAELFENRWCILTPPEGTDPAAVARLT  164 (307)
T ss_pred             HHhhCCCCCEEEeCccchHHHHHHHHHhCC-CCCeEEeCCCCCCCcccchhhcCHHHHCCCeEEEeCCCCCCHHHHHHHH
Confidence            445678899999999999888887776553 57899998 9987542 222       23333343   67888999999


Q ss_pred             HHHHHhcc-ceecCCCCHHHHHHHH
Q 044696           75 PLFEVLGK-PTFMGGAGCGQSCKIA   98 (220)
Q Consensus        75 ~~l~~~~~-~~~~G~~G~a~~~Kl~   98 (220)
                      ++++.+|. ++++++..--..+=++
T Consensus       165 ~l~~~lG~~~~~~~~~~hD~~~A~~  189 (307)
T PRK07502        165 AFWRALGARVEEMDPEHHDLVLAIT  189 (307)
T ss_pred             HHHHHcCCEEEEcCHHHHhHHHHHH
Confidence            99999999 8888864333333333

>PRK09287 6-phosphogluconate dehydrogenase; Validated

Probab=97.82  E-value=0.00035  Score=64.01  Aligned_cols=145  Identities=12%  Similarity=0.124  Sum_probs=105.0

Q ss_pred             HHhHHHHHHHHHHhcc---ceecCCCCH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHh
Q 044696           67 SAVVQWLTPLFEVLGK---PTFMGGAGC-----GQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVK  132 (220)
Q Consensus        67 ~~~~~~~~~~l~~~~~---~~~~G~~G~-----a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~  132 (220)
                      .+++.|+.|.++..-.   ..|.|+.+.     ++.+|.+.|.+.++.+.+++|++.+.++      .++|..++.++.+
T Consensus       271 ~AvfaR~~S~~k~~r~~~~~~~~g~~~~~~~~~~~~i~~v~~al~~~~i~ayaQGf~ll~~as~~~~w~ldl~~ia~iWr  350 (459)
T PRK09287        271 EAVFARYLSSLKDQRVAASKVLSGPAAKFEGDKAEFIEDVRQALYASKIVSYAQGFALLRAASEEYGWDLDLGEIARIWR  350 (459)
T ss_pred             HHHHHHhccccHHHHHHhhcccCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHhC
Confidence            4678888888887642   445676554     8999999999999999999999999887      6889999999999


Q ss_pred             ccC-CChHHHHhhhhhhccc-cC-----CCCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCC
Q 044696          133 GGA-AGSMAMELYGERMIEK-DF-----RPGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDG  203 (220)
Q Consensus       133 ~~~-~~s~~~~~~~~~~~~~-~~-----~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g  203 (220)
                      .+. -.|++++...+...++ +.     ++.|  .+.-....++.++..+-+.    |+|+|.+..+..+|+.....-+ 
T Consensus       351 ~GcIIRs~lL~~i~~a~~~~~~l~nl~~~~~~~~~i~~~~~~~R~vV~~a~~~----gip~P~ls~aL~y~d~~~~~~~-  425 (459)
T PRK09287        351 GGCIIRAQFLQKITDAYEANPDLANLLLDPYFKDILEEYQDALRRVVALAVQA----GIPVPAFSSALSYYDSYRTARL-  425 (459)
T ss_pred             CCCEEeHHHHHHHHHHHHhCCCchhhcCCHHHHHHHHhhhhHHHHHHHHHHHc----CCCHHHHHHHHHHHHHhhcCCc-
Confidence            877 5788887655544331 11     1112  1333445568889999999    9999999999988887654422 


Q ss_pred             CCChHHHHHHHHHhcC
Q 044696          204 KFGTQGLVSVIERING  219 (220)
Q Consensus       204 ~~d~~av~~~~~~~~~  219 (220)
                         ...++...|+..|
T Consensus       426 ---~anliqaqRd~FG  438 (459)
T PRK09287        426 ---PANLIQAQRDYFG  438 (459)
T ss_pred             ---cHHHHHHHHhHhC
Confidence               2345555555443

>PF00393 6PGD: 6-phosphogluconate dehydrogenase, C-terminal domain; InterPro: IPR006114 6-Phosphogluconate dehydrogenase (1

Probab=97.82  E-value=0.00014  Score=62.46  Aligned_cols=95  Identities=20%  Similarity=0.211  Sum_probs=65.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---ccCCChHHHHhhhhhhccccCCCCchhhHHH----
Q 044696           92 GQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAVK---GGAAGSMAMELYGERMIEKDFRPGGFAEYMV----  163 (220)
Q Consensus        92 a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~----  163 (220)
                      |+.+||++|-+-++.|++++|+..+.++ .|++.+++.+++.   .+...|++++-...-+...|.+...-++...    
T Consensus         1 GHyvKMVHNGIEYg~MQ~iaE~y~ll~~~~~~~~~ei~~vf~~Wn~g~l~S~Lieit~~il~~~d~~g~~lld~I~d~a~   80 (291)
T PF00393_consen    1 GHYVKMVHNGIEYGDMQLIAEGYDLLRRGLGLSNEEIADVFEEWNKGELRSYLIEITADILRKKDETGGPLLDKILDKAG   80 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT--HHHHHHHHHHHHTTTT-BHHHHHHHHHHT-B-TTSSBGGGGB-S---
T ss_pred             CCceeeeeccHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHCcCchhhHHHHHHHHHHhhccCccCcchhhhCCccC
Confidence            6889999999999999999999999995 7999988877776   4566788888777766666533223233321    


Q ss_pred             -H-HHHHHHHHHhhcccCCCCCccHHHHH
Q 044696          164 -K-DMGMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       164 -K-D~~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                       | .-+...+.+-+.    |+|.|+...+
T Consensus        81 ~kGtG~Wt~~~a~~~----gvp~p~I~~a  105 (291)
T PF00393_consen   81 QKGTGKWTVQEALEL----GVPAPTIAAA  105 (291)
T ss_dssp             -BSHHHHHHHHHHHH----T---HHHHHH
T ss_pred             CCCccchHHHHHHHh----CCCccHHHHH
Confidence             1 136778889999    9999988776

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequences are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This entry represents the C-terminal all-alpha domain of 6-phosphogluconate dehydrogenase. The domain contains two structural repeats of 5 helices each. The NAD-binding domain is described in IPR006115 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0050661 NADP binding, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 2ZYD_A 2ZYA_A 3FWN_A 2JKV_E 2ZYG_B 4E21_A 1PGJ_A 1PGP_A 1PGN_A 2PGD_A ....

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=97.67  E-value=0.00028  Score=60.75  Aligned_cols=108  Identities=19%  Similarity=0.119  Sum_probs=84.7

Q ss_pred             CCCCEEEecCCCCHHHHHHHHHHHHhc--CCcEEE-ecCCCChHHhhccceeEEecCCHHhHHHHHHHHH-Hhcc-ceec
Q 044696           12 NPGAVYVDTTSSHPALAREIFKVARER--DCWAVD-APVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFE-VLGK-PTFM   86 (220)
Q Consensus        12 ~~g~~ivd~ST~~p~~~~~la~~~~~~--G~~~ld-apV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~-~~~~-~~~~   86 (220)
                      +++++++..||+.|.+.........++  |.||.+ +|+++.+      ++....++++++++++.+++. .+++ ++++
T Consensus       112 ~~~~il~snTS~~~~~~la~~~~~~~r~~g~hf~~P~~~~~lv------Elv~~~~T~~~~~~~~~~~~~~~lgk~pv~v  185 (286)
T PRK07819        112 DPDAVLASNTSSIPIMKLAAATKRPGRVLGLHFFNPVPVLPLV------ELVPTLVTSEATVARAEEFASDVLGKQVVRA  185 (286)
T ss_pred             CCCcEEEECCCCCCHHHHHhhcCCCccEEEEecCCCcccCceE------EEeCCCCCCHHHHHHHHHHHHHhCCCCceEe
Confidence            689999999999898877766555666  899999 7888876      778888999999999999988 6999 9999


Q ss_pred             CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc
Q 044696           87 GG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG  134 (220)
Q Consensus        87 G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~  134 (220)
                      ++ +|.      +.|-   .....+.|++.+.+.--.+++++=.++..+
T Consensus       186 ~d~pGf------i~nR---i~~~~~~Ea~~ll~eGv~~~~dID~~~~~g  225 (286)
T PRK07819        186 QDRSGF------VVNA---LLVPYLLSAIRMVESGFATAEDIDKAMVLG  225 (286)
T ss_pred             cCCCCh------HHHH---HHHHHHHHHHHHHHhCCCCHHHHHHHHHhC
Confidence            87 773      2232   234567788888877657788876666544

>PTZ00142 6-phosphogluconate dehydrogenase; Provisional

Probab=97.64  E-value=0.0022  Score=59.02  Aligned_cols=144  Identities=9%  Similarity=0.082  Sum_probs=102.7

Q ss_pred             HhHHHHHHHHHHhcc---ceecCCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----c--CCCHHHHHHH
Q 044696           68 AVVQWLTPLFEVLGK---PTFMGGA--------GCGQSCKIANQIVVGANLLGLSEGLVFADE----A--GLDVRKWRDA  130 (220)
Q Consensus        68 ~~~~~~~~~l~~~~~---~~~~G~~--------G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~----~--Gl~~~~~~~~  130 (220)
                      .++.|..+.++..-.   ..+.|+.        +.++.+|.+.|.+.++.+.+++|++.+.++    +  ++|..++.++
T Consensus       283 a~~~R~~S~~k~~r~~~~~~~~gp~~~~~~~~~~~~~~i~~v~~al~~~~i~ayaQGf~ll~~as~~y~w~ldl~~ia~i  362 (470)
T PTZ00142        283 SVDARNISALKEERTKASSHLAGPNPANKTETEDKKYFIDDLKNALYCSKIISYTQGFFLIKEASKEFGWNLNLGEIARI  362 (470)
T ss_pred             HHHHHHhhhhHHHHHHhccccCCCccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence            567788888876542   3445653        678999999999999999999999998873    4  9999999999


Q ss_pred             HhccC-CChHHHHhhhhhhcccc-C-----CCCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCC
Q 044696          131 VKGGA-AGSMAMELYGERMIEKD-F-----RPGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG  201 (220)
Q Consensus       131 l~~~~-~~s~~~~~~~~~~~~~~-~-----~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G  201 (220)
                      .+.+. -.|++++...+...++. .     ++.|  .+......++.++..+-+.    |+|+|....+..+|+.....-
T Consensus       363 Wr~GcIIRs~lL~~i~~a~~~~~~l~nl~~~~~~~~~i~~~~~~~R~vV~~a~~~----gip~P~~s~aL~y~~s~~~~~  438 (470)
T PTZ00142        363 WRGGCIIRAVFLDRIKNAFKKNPQLDLLFLDPDFNDELKNKQPSWRKVVSMATKN----GIPTPAFSASLAYYQMYRSQN  438 (470)
T ss_pred             hCCCceeeHhHHHHHHHHHhcCCChhhhcCCHHHHHHHHHhhHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHhhcCC
Confidence            99877 56788876555443321 1     1112  1334445568889999999    999999999999777664432


Q ss_pred             CCCCChHHHHHHHHHhcC
Q 044696          202 DGKFGTQGLVSVIERING  219 (220)
Q Consensus       202 ~g~~d~~av~~~~~~~~~  219 (220)
                      +    ...++...|+..|
T Consensus       439 ~----~anliqaqRd~FG  452 (470)
T PTZ00142        439 L----PANLVQAQRDYFG  452 (470)
T ss_pred             c----cHHHHHHHHHHhC
Confidence            2    2345555555443

>PRK06545 prephenate dehydrogenase; Validated

Probab=97.60  E-value=0.0021  Score=57.09  Aligned_cols=115  Identities=17%  Similarity=0.148  Sum_probs=78.0

Q ss_pred             CCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCCCh-H-------HhhccceeEEec---CCHHhHHHHHHHHH
Q 044696           11 LNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSGGD-I-------GARDGKLAIFAA---GDSAVVQWLTPLFE   78 (220)
Q Consensus        11 ~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g~~-~-------~a~~g~l~i~~g---G~~~~~~~~~~~l~   78 (220)
                      ++++.+|.|++++.....+++.+. ..++.+|+. .|+.|+. .       ..-.+...+++.   .+++.+++++++++
T Consensus        85 l~~~~ivtDv~SvK~~i~~~~~~~-~~~~~~~ig~HPMaG~e~sG~~aa~~~lf~g~~~il~~~~~~~~~~~~~v~~l~~  163 (359)
T PRK06545         85 LKPGVIVTDVGSVKGAILAEAEAL-LGDLIRFVGGHPMAGSHKSGVAAARADLFENAPWVLTPDDHTDPDAVAELKDLLS  163 (359)
T ss_pred             CCCCcEEEeCccccHHHHHHHHHh-cCCCCeEEeeCCcCcCchhhHHHhcHHHHCCCcEEEecCCCCCHHHHHHHHHHHH
Confidence            678999999999999888887766 346789999 5998862 2       222444456665   47788999999999


Q ss_pred             Hhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Q 044696           79 VLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKG  133 (220)
Q Consensus        79 ~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~  133 (220)
                      .+|. ++++.+...-..+-++..+-.     .+++++  +...+.+.+....+...
T Consensus       164 ~lGa~~v~~~~~~HD~~~A~vshlPh-----~ia~al--~~~~~~~~~~~~~la~~  212 (359)
T PRK06545        164 GTGAKFVVLDAEEHDRAVALVSHLPH-----ILASSL--AARLAGEHPLALRLAAG  212 (359)
T ss_pred             HcCCEEEECCHHHHhHHHhHhccHHH-----HHHHHH--HHhhccCchHHHhhhcc
Confidence            9999 888987555555555543332     222333  55666665555544443

>KOG2666 consensus UDP-glucose/GDP-mannose dehydrogenase [Carbohydrate transport and metabolism; Signal transduction mechanisms]

Probab=97.54  E-value=0.012  Score=51.22  Aligned_cols=172  Identities=13%  Similarity=0.114  Sum_probs=121.9

Q ss_pred             hhcCCCCCEEEecCCCCHHHHHHHHHHHH--hcCCcEEEecCCCChHHhhccce--------eEEecCCHH-----hHHH
Q 044696            8 VSALNPGAVYVDTTSSHPALAREIFKVAR--ERDCWAVDAPVSGGDIGARDGKL--------AIFAAGDSA-----VVQW   72 (220)
Q Consensus         8 ~~~~~~g~~ivd~ST~~p~~~~~la~~~~--~~G~~~ldapV~g~~~~a~~g~l--------~i~~gG~~~-----~~~~   72 (220)
                      .+.....+++++-||+....++.+..-+.  ..|+.|   -|...|.-...|+.        -+++||++.     +++.
T Consensus       114 a~~s~~~kivvekstvpv~aaesi~~il~~n~~~i~f---qilsnpeflaegtaikdl~npdrvligg~etpeg~~av~~  190 (481)
T KOG2666|consen  114 ADVSVSDKIVVEKSTVPVKAAESIEKILNHNSKGIKF---QILSNPEFLAEGTAIKDLFNPDRVLIGGRETPEGFQAVQA  190 (481)
T ss_pred             HHhccCCeEEEeeccccchHHHHHHHHHhcCCCCcee---EeccChHHhcccchhhhhcCCceEEECCCCChhHHHHHHH
Confidence            34455679999999999999999988875  356665   23334443333432        578999762     3344


Q ss_pred             HHHHHHHhcc--ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcc
Q 044696           73 LTPLFEVLGK--PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIE  150 (220)
Q Consensus        73 ~~~~l~~~~~--~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~  150 (220)
                      ...+.+.+-.  -+..-..=++..-||+.|.+++--+..+.-.-++|+.-|-|..++.-.+....       +.+++.++
T Consensus       191 l~~vyehwvp~~~iittntwsselsklaanaflaqrissins~salceatgadv~eva~avg~d~-------rig~kfl~  263 (481)
T KOG2666|consen  191 LKDVYEHWVPREQIITTNTWSSELSKLAANAFLAQRISSINSMSALCEATGADVSEVAYAVGTDS-------RIGSKFLN  263 (481)
T ss_pred             HHHHHHhhCcccceeeccccHHHHHHHHHHHHHHHHHhhhHHHHHHHHhcCCCHHHHHHHhcccc-------cccHHHhh
Confidence            4555555543  23333456899999999999999999999999999999999998887775432       22344443


Q ss_pred             ccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696          151 KDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVAN  200 (220)
Q Consensus       151 ~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~  200 (220)
                      .  +.+|.-+.++||+-..+=..+.+    ++|     .+.++|+..++.
T Consensus       264 a--svgfggscfqkdilnlvyice~l----nlp-----eva~ywqqvi~~  302 (481)
T KOG2666|consen  264 A--SVGFGGSCFQKDILNLVYICECL----NLP-----EVAEYWQQVIKI  302 (481)
T ss_pred             c--ccCcCchhHHHHHHHHHHHHhcC----CCh-----HHHHHHHHHhhh
Confidence            2  35788899999998888888888    766     566777776664

>PRK07680 late competence protein ComER; Validated

Probab=97.48  E-value=0.0054  Score=52.22  Aligned_cols=120  Identities=11%  Similarity=0.018  Sum_probs=76.9

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEec--CCHHhHHHHHHHHHHhccce
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA--GDSAVVQWLTPLFEVLGKPT   84 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~g--G~~~~~~~~~~~l~~~~~~~   84 (220)
                      +.+.+.++++||+++..-  ..+++.+++..+.++++.    +.+..+..|...++.|  .+.+.++.++++|+.+|..+
T Consensus        82 l~~~l~~~~~iis~~ag~--~~~~L~~~~~~~~~r~~p----~~~~~~~~G~t~~~~g~~~~~~~~~~~~~ll~~~G~~~  155 (273)
T PRK07680         82 LAPHLTDEHCLVSITSPI--SVEQLETLVPCQVARIIP----SITNRALSGASLFTFGSRCSEEDQQKLERLFSNISTPL  155 (273)
T ss_pred             HHhhcCCCCEEEEECCCC--CHHHHHHHcCCCEEEECC----ChHHHHhhccEEEeeCCCCCHHHHHHHHHHHHcCCCEE
Confidence            445667889999998643  355666666544455554    3455677888777776  46678899999999999966


Q ss_pred             ecCCC-CHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc
Q 044696           85 FMGGA-GCGQ-SCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG  134 (220)
Q Consensus        85 ~~G~~-G~a~-~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~  134 (220)
                      ++.+. -.+. .+=-+.-.+.+..+.++.++.  .++.|++.++..+++...
T Consensus       156 ~i~e~~~~~~~~l~gs~pa~~~~~~~al~~~~--~~~~Gl~~~~a~~~~~~~  205 (273)
T PRK07680        156 VIEEDITRVSSDIVSCGPAFFSYLLQRFIDAA--VEETNISKEEATTLASEM  205 (273)
T ss_pred             EEChHhcchhhhhccchHHHHHHHHHHHHHHH--HHhcCCCHHHHHHHHHHH
Confidence            67652 2221 111122234444555555543  244899999988887654

>TIGR01724 hmd_rel H2-forming N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase-related protein

Probab=97.22  E-value=0.031  Score=48.85  Aligned_cols=115  Identities=13%  Similarity=0.114  Sum_probs=65.2

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHH---HHhcCCc---EEEecCCCChHHhhccceeEEecC--------CHHhH
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKV---ARERDCW---AVDAPVSGGDIGARDGKLAIFAAG--------DSAVV   70 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~---~~~~G~~---~ldapV~g~~~~a~~g~l~i~~gG--------~~~~~   70 (220)
                      +|+++++++|++||||||++|+..+++-+.   +.++.+.   |==+.|-|.+.    -...+..|.        +++..
T Consensus       100 ~GLaa~L~~GaIVID~STIsP~t~~~~~e~~l~~~r~d~~v~s~HP~~vP~~~~----~~~~~~~~~~~~~~~~A~ee~i  175 (341)
T TIGR01724       100 RTIIEHVPENAVICNTCTVSPVVLYYSLEKILRLKRTDVGISSMHPAAVPGTPQ----HGHYVIGGKPTAGKEMATEEQI  175 (341)
T ss_pred             HHHHhcCCCCCEEEECCCCCHHHHHHHHHHHhhcCccccCeeccCCCCCCCCCC----CceeeeccccccccccCCHHHH
Confidence            368889999999999999999999888766   2223221   22223333332    222332222        35677


Q ss_pred             HHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCH
Q 044696           71 QWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFA-DEAGLDV  124 (220)
Q Consensus        71 ~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la-~~~Gl~~  124 (220)
                      +++-++.+..++ .|.+=..=.+....|+. .+.+..++++.+-...+ +-.|.+.
T Consensus       176 ~~~~el~~~~~~~~~~~pa~l~~~v~Dm~s-~vta~~~~gil~y~~~~t~i~~ap~  230 (341)
T TIGR01724       176 SKCVELAKSTGKKAYVVPADVTSAVADMGS-LVTAVALAGVLDYYYVGTQIINAPK  230 (341)
T ss_pred             HHHHHHHHHhCCCeeecchhhcchhhhHHH-HHHHHHHHHHHHHHHHHHHHhcCcH
Confidence            888888888888 55543222233333332 34444555555444444 2344443

This model represents a sister clade to the authenticated coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase (HMD) of TIGR01723. Two members, designated HmdII and HmdIII, are found. Members are restricted to methanogens, but the function is unknown.

>PRK11880 pyrroline-5-carboxylate reductase; Reviewed

Probab=97.19  E-value=0.026  Score=47.64  Aligned_cols=170  Identities=12%  Similarity=0.024  Sum_probs=98.5

Q ss_pred             CCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC--CHHhHHHHHHHHHHhccceecC-CC-
Q 044696           14 GAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG--DSAVVQWLTPLFEVLGKPTFMG-GA-   89 (220)
Q Consensus        14 g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG--~~~~~~~~~~~l~~~~~~~~~G-~~-   89 (220)
                      +++||.++...+..  .+.+++ .++.+++.+ +...|.....+...++.+.  +++.++.++.+|+.+|.++++. +. 
T Consensus        87 ~~~vvs~~~gi~~~--~l~~~~-~~~~~iv~~-~P~~p~~~~~~~~~i~~~~~~~~~~~~~v~~l~~~lG~~~~~~~e~~  162 (267)
T PRK11880         87 DKLVVSIAAGVTLA--RLERLL-GADLPVVRA-MPNTPALVGAGMTALTANALVSAEDRELVENLLSAFGKVVWVDDEKQ  162 (267)
T ss_pred             CCEEEEecCCCCHH--HHHHhc-CCCCcEEEe-cCCchHHHcCceEEEecCCCCCHHHHHHHHHHHHhCCeEEEECChHh
Confidence            46777666655432  344443 245677763 4455666666655556554  7888999999999999955666 32 


Q ss_pred             -CHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcc-ccCCCCc--hhhHHHH
Q 044696           90 -GCGQSCKIANQIVVGANLLGLSEGLVF-ADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIE-KDFRPGG--FAEYMVK  164 (220)
Q Consensus        90 -G~a~~~Kl~~n~~~~~~~~~~aEa~~l-a~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~-~~~~~~f--~~~~~~K  164 (220)
                       -.+..+  +.+  .-..+..+.|++.- +.+.|+++++..+++....      ......+.+ +++....  .+..--.
T Consensus       163 ~d~~~a~--~~~--~pa~~~~~~~~~~~~~~~~Gl~~~~a~~~~~~~~------~g~~~~~~~~~~~~~~l~~~v~tpgG  232 (267)
T PRK11880        163 MDAVTAV--SGS--GPAYVFLFIEALADAGVKLGLPREQARKLAAQTV------LGAAKLLLESGEHPAELRDNVTSPGG  232 (267)
T ss_pred             cchHHHH--hcC--hHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH------HHHHHHHHhcCCCHHHHHHhCCCCcH
Confidence             222212  111  11223345566554 5779999999888887542      111111111 1110000  0111111


Q ss_pred             HHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCC
Q 044696          165 DMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG  201 (220)
Q Consensus       165 D~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G  201 (220)
                      =....++..++.    |++-.+.+++.+.++++.+.+
T Consensus       233 ~t~~gl~~l~~~----g~~~~~~~a~~~~~~ra~~~~  265 (267)
T PRK11880        233 TTIAALRVLEEK----GLRAAVIEAVQAAAKRSKELG  265 (267)
T ss_pred             HHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHhc
Confidence            135566777888    999999999999999998864

>PRK12921 2-dehydropantoate 2-reductase; Provisional

Probab=96.70  E-value=0.093  Score=44.98  Aligned_cols=174  Identities=11%  Similarity=-0.001  Sum_probs=93.8

Q ss_pred             hcCCCCCEEEecCCCCHHHHHHHHHHHHhc----CCcEEEecCCCChHHhhccceeEEecCC----HHhHHHHHHHHHHh
Q 044696            9 SALNPGAVYVDTTSSHPALAREIFKVARER----DCWAVDAPVSGGDIGARDGKLAIFAAGD----SAVVQWLTPLFEVL   80 (220)
Q Consensus         9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~----G~~~ldapV~g~~~~a~~g~l~i~~gG~----~~~~~~~~~~l~~~   80 (220)
                      +.+.++++||.+... ......+.+.+.+.    |+.++.+++.++-.--..+.-.+.+|..    .+..+++..+|...
T Consensus        90 ~~~~~~~~ii~~~nG-~~~~~~l~~~~~~~~v~~g~~~~~~~~~~~g~v~~~~~~~~~iG~~~~~~~~~~~~l~~~l~~~  168 (305)
T PRK12921         90 PLVGEDTVIIPLQNG-IGQLEQLEPYFGRERVLGGVVFISAQLNGDGVVVQRADHRLTFGEIPGQRSERTRAVRDALAGA  168 (305)
T ss_pred             hhcCCCCEEEEeeCC-CChHHHHHHhCCcccEEEEEEEEEEEECCCeEEEEcCCCcEEEcCCCCCcCHHHHHHHHHHHhC
Confidence            345566776655432 22233444444322    4455666654421111112223455542    23445566666665


Q ss_pred             cc-ceecCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcCCCHH--HHHHHHhc---
Q 044696           81 GK-PTFMGGAGCGQSCKIANQIVVG---------------------ANLLGLSEGLVFADEAGLDVR--KWRDAVKG---  133 (220)
Q Consensus        81 ~~-~~~~G~~G~a~~~Kl~~n~~~~---------------------~~~~~~aEa~~la~~~Gl~~~--~~~~~l~~---  133 (220)
                      +- +....+.-...-.|++.|..+.                     .....+.|...++++.|+++.  .+.+.+..   
T Consensus       169 g~~~~~~~di~~~~w~Kl~~N~~~n~l~a~~~~~~g~~~~~~~~~~l~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~~~  248 (305)
T PRK12921        169 RLEVVLSENIRQDIWRKLLFNAVMNGMTALGRATVGGILSRPGGRDLARALLRECLAVARAEGAPLRDDVVEEIVKIFAG  248 (305)
T ss_pred             CCCceecHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHhCccHHHHHHHHHHHHHHHHHHcCCCCChhHHHHHHHHHhc
Confidence            54 4444557778899999886542                     234568899999999998743  33232221   


Q ss_pred             c-C-CChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          134 G-A-AGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       134 ~-~-~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                      . . ..+.+++    .+.++..   .-++..   ...+++.+++.    |+++|..+...++++..
T Consensus       249 ~~~~~~sSm~~----D~~~gr~---tEid~i---~G~vv~~a~~~----gv~~P~~~~l~~~~~~~  300 (305)
T PRK12921        249 APGDMKTSMLR----DMEKGRP---LEIDHL---QGVLLRRARAH----GIPTPILDTVYALLKAY  300 (305)
T ss_pred             cCCCCCcHHHH----HHHcCCc---ccHHHH---HHHHHHHHHHh----CCCCcHHHHHHHHHHHH
Confidence            0 0 1111111    1111211   122222   24689999999    99999999998887654

>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=96.51  E-value=0.022  Score=48.67  Aligned_cols=111  Identities=17%  Similarity=0.170  Sum_probs=73.0

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHH----hcCCcEEE-ecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVAR----ERDCWAVD-APVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~----~~G~~~ld-apV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      +.+.+++++++ .++|+++..+ ++++.+.    -.|++|.+ ++++.+.. +..|     -+.+++.+++++++|+.+|
T Consensus       104 l~~~~~~~~il-~s~ts~~~~~-~la~~~~~~~r~ig~h~~~P~~~~~~ve-v~~g-----~~t~~e~~~~~~~l~~~lG  175 (282)
T PRK05808        104 LDEIAKPEAIL-ATNTSSLSIT-ELAAATKRPDKVIGMHFFNPVPVMKLVE-IIRG-----LATSDATHEAVEALAKKIG  175 (282)
T ss_pred             HHhhCCCCcEE-EECCCCCCHH-HHHHhhCCCcceEEeeccCCcccCccEE-EeCC-----CCCCHHHHHHHHHHHHHcC
Confidence            33456666655 5666666555 6666663    24677777 56665553 2222     4668899999999999999


Q ss_pred             c-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc
Q 044696           82 K-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG  134 (220)
Q Consensus        82 ~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~  134 (220)
                      + ++++++ +|.      +.|-   .....+.|++.+.+.--.+++++=..+..+
T Consensus       176 k~pv~~~d~~g~------i~~R---i~~~~~~ea~~~~~~gv~~~~diD~~~~~g  221 (282)
T PRK05808        176 KTPVEVKNAPGF------VVNR---ILIPMINEAIFVLAEGVATAEDIDEGMKLG  221 (282)
T ss_pred             CeeEEecCccCh------HHHH---HHHHHHHHHHHHHHhCCCCHHHHHHHHHhC
Confidence            9 999986 652      2232   334567788888877556777765555543

>PF02153 PDH: Prephenate dehydrogenase; InterPro: IPR003099 Members of this family are prephenate dehydrogenases 1

Probab=96.09  E-value=0.56  Score=39.63  Aligned_cols=81  Identities=23%  Similarity=0.405  Sum_probs=56.6

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCC--------hHHhhccceeEEecCC---HHhHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGG--------DIGARDGKLAIFAAGD---SAVVQWLT   74 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~--------~~~a~~g~l~i~~gG~---~~~~~~~~   74 (220)
                      +.+.+++|.+|+|.+++--...+.+.+... .+++||-+ |+.|.        ...--.|...+++-++   .+.++.++
T Consensus        65 ~~~~~~~~~iv~Dv~SvK~~~~~~~~~~~~-~~~~~v~~HPM~G~e~~G~~~a~~~lf~g~~~il~p~~~~~~~~~~~~~  143 (258)
T PF02153_consen   65 IAPYLKPGAIVTDVGSVKAPIVEAMERLLP-EGVRFVGGHPMAGPEKSGPEAADADLFEGRNWILCPGEDTDPEALELVE  143 (258)
T ss_dssp             HHCGS-TTSEEEE--S-CHHHHHHHHHHHT-SSGEEEEEEESCSTSSSSGGG-TTTTTTTSEEEEEECTTS-HHHHHHHH
T ss_pred             hhhhcCCCcEEEEeCCCCHHHHHHHHHhcC-cccceeecCCCCCCccccchhhcccccCCCeEEEeCCCCChHHHHHHHH
Confidence            445678999999999999988888877665 67888877 77776        2333357778888443   46889999


Q ss_pred             HHHHHhcc-ceecCC
Q 044696           75 PLFEVLGK-PTFMGG   88 (220)
Q Consensus        75 ~~l~~~~~-~~~~G~   88 (220)
                      .+++.+|. ++++-.
T Consensus       144 ~l~~~~Ga~~~~~~~  158 (258)
T PF02153_consen  144 ELWEALGARVVEMDA  158 (258)
T ss_dssp             HHHHHCT-EEEE--H
T ss_pred             HHHHHCCCEEEEcCH
Confidence            99999999 888753

3.1.12 from EC involved in tyrosine biosynthesis. ; GO: 0004665 prephenate dehydrogenase (NADP+) activity, 0008977 prephenate dehydrogenase activity, 0006571 tyrosine biosynthetic process, 0055114 oxidation-reduction process; PDB: 2F1K_B 2PV7_A 3DZB_B 3KTD_B 3B1F_A 2G5C_D 3GGP_C 3GGG_C 3GGO_D.

>PLN02712 arogenate dehydrogenase

Probab=95.95  E-value=0.092  Score=50.52  Aligned_cols=77  Identities=23%  Similarity=0.330  Sum_probs=53.7

Q ss_pred             cCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEE-EecCCCChHHhhcc--cee-----EEecCCHHhHHHHH---HHHH
Q 044696           10 ALNPGAVYVDTTSSHPALAREIFKVARERDCWAV-DAPVSGGDIGARDG--KLA-----IFAAGDSAVVQWLT---PLFE   78 (220)
Q Consensus        10 ~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~l-dapV~g~~~~a~~g--~l~-----i~~gG~~~~~~~~~---~~l~   78 (220)
                      .+++|++++|++|+. ....+..+.+...|++|+ ..|+.|.... ..|  .+.     .+++++.+.+++++   .+++
T Consensus       449 ~lk~g~ivvDv~SvK-~~~~~~~~~~l~~~~~~v~~HPm~G~e~~-~~G~~~~~~lf~~~~v~~~~~~~~~~~~l~~l~~  526 (667)
T PLN02712        449 RLKRSTLFVDVLSVK-EFPRNLFLQHLPQDFDILCTHPMFGPESG-KNGWNNLAFVFDKVRIGSDDRRVSRCDSFLDIFA  526 (667)
T ss_pred             cCCCCcEEEECCCcc-HHHHHHHHHhccCCCceEeeCCCCCcccc-ccchhhhhhhccCcEeCCCcchHHHHHHHHHHHH
Confidence            467899999999998 444444445555688898 9999998754 122  122     45677776666655   7788


Q ss_pred             Hhcc-ceecCC
Q 044696           79 VLGK-PTFMGG   88 (220)
Q Consensus        79 ~~~~-~~~~G~   88 (220)
                      .+|. ++.+.+
T Consensus       527 ~lGa~vv~ms~  537 (667)
T PLN02712        527 REGCRMVEMSC  537 (667)
T ss_pred             HcCCEEEEeCH
Confidence            8888 888875

>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.45  E-value=0.15  Score=43.64  Aligned_cols=112  Identities=11%  Similarity=0.066  Sum_probs=70.2

Q ss_pred             hhhcCCCCCEE-EecCCCCHHHHHHHHHHHHh-cCCcEEEecCCCChHHhhccceeEEe---cCCHHhHHHHHHHHHHhc
Q 044696            7 IVSALNPGAVY-VDTTSSHPALAREIFKVARE-RDCWAVDAPVSGGDIGARDGKLAIFA---AGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         7 i~~~~~~g~~i-vd~ST~~p~~~~~la~~~~~-~G~~~ldapV~g~~~~a~~g~l~i~~---gG~~~~~~~~~~~l~~~~   81 (220)
                      +.+.+++++++ .++||.++....+..+.-.+ .|.||.+.| .       ...+..++   ..++++++++..+++.+|
T Consensus       106 l~~~~~~~~ii~sntSt~~~~~~~~~~~~~~r~vg~Hf~~p~-~-------~~~lvevv~~~~t~~~~~~~~~~~~~~~G  177 (287)
T PRK08293        106 LAKVAPEKTIFATNSSTLLPSQFAEATGRPEKFLALHFANEI-W-------KNNTAEIMGHPGTDPEVFDTVVAFAKAIG  177 (287)
T ss_pred             HHhhCCCCCEEEECcccCCHHHHHhhcCCcccEEEEcCCCCC-C-------cCCeEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence            34456677777 58888888654443211111 234442221 1       23445555   557789999999999999


Q ss_pred             c-ceecC-C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696           82 K-PTFMG-G-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA  135 (220)
Q Consensus        82 ~-~~~~G-~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~  135 (220)
                      + ++.+. + +|.      +.|=   .....+.|++.+.+.--.+++++=.++..+.
T Consensus       178 k~pv~v~~d~pgf------i~nR---i~~~~~~ea~~l~~~g~a~~~~iD~a~~~~~  225 (287)
T PRK08293        178 MVPIVLKKEQPGY------ILNS---LLVPFLSAALALWAKGVADPETIDKTWMIAT  225 (287)
T ss_pred             CeEEEecCCCCCH------hHHH---HHHHHHHHHHHHHHcCCCCHHHHHHHHHhcc
Confidence            9 88886 4 663      1222   2344678999998886678988866665543

>PLN02350 phosphogluconate dehydrogenase (decarboxylating)

Probab=95.32  E-value=0.47  Score=44.08  Aligned_cols=120  Identities=13%  Similarity=0.109  Sum_probs=86.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhccC-CChHHHHhhhhhhccc-cC-----CCCc-
Q 044696           92 GQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKGGA-AGSMAMELYGERMIEK-DF-----RPGG-  157 (220)
Q Consensus        92 a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~-----~~~f-  157 (220)
                      ....+-+.+.+..+.+.+++|++.+.++      +++|..++.++++.+. -.|++++...+...++ +.     ++.| 
T Consensus       327 ~~~~~~l~~al~~~~i~ayaQGf~ll~~as~~~~w~ldl~~ia~iWr~GcIIrs~lL~~i~~a~~~~~~l~~l~~~~~~~  406 (493)
T PLN02350        327 KQLIDDVRQALYASKICSYAQGMNLIRAKSVEKGWNLNLGELARIWKGGCIIRAVFLDRIKKAYDRNPDLASLLVDPEFA  406 (493)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHhCCCceeeHhHHHHHHHHHHcCCChhhhcCCHHHH
Confidence            4666778899999999999999999884      5899999999999877 5788887665544332 11     1112 


Q ss_pred             -hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696          158 -FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING  219 (220)
Q Consensus       158 -~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~  219 (220)
                       .+.......+.++..+-+.    |+|.|.+..+..+|+.....-    -...++...|+..|
T Consensus       407 ~~~~~~~~~~r~~V~~a~~~----gip~P~ls~aL~y~~s~~~~~----~~~nliqaqRd~FG  461 (493)
T PLN02350        407 KEMVERQAAWRRVVSLAINA----GISTPGMSASLAYFDTYRRAR----LPANLVQAQRDYFG  461 (493)
T ss_pred             HHHHHhhhHHHHHHHHHHHc----CCCHHHHHHHHHHHHhhccCC----ccHHHHHHHHHHhC
Confidence             2334556678899999999    999999999999777654432    22345555555443

>PF00393 6PGD: 6-phosphogluconate dehydrogenase, C-terminal domain; InterPro: IPR006114 6-Phosphogluconate dehydrogenase (1

Probab=95.31  E-value=0.35  Score=41.79  Aligned_cols=122  Identities=12%  Similarity=0.132  Sum_probs=82.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhccC-CChHHHHhhhhhhccc-cC-----C
Q 044696           88 GAGCGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKGGA-AGSMAMELYGERMIEK-DF-----R  154 (220)
Q Consensus        88 ~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~-----~  154 (220)
                      ........+-+.+.+.++.+.++++++.+-++      .+++..++..+.+.+. -.|.+++...+...++ +.     +
T Consensus       135 ~~~~~~~i~~l~~Aly~~~i~~yaQGf~ll~~as~~~~W~lnl~~ia~IWr~GCIIRs~lL~~i~~af~~~p~l~nLll~  214 (291)
T PF00393_consen  135 KEDKEEFIEDLRKALYAAKIISYAQGFALLRAASKEYGWDLNLSEIARIWRGGCIIRSWLLDDIAEAFKENPDLENLLLD  214 (291)
T ss_dssp             -SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT----HHHHHHHTSSSSTT-BTHHHHHHHHHHH-TT-STGGGS
T ss_pred             cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCcHHHHHHHHhccchHHHHHHHHHHHHHHhCCChhccccC
Confidence            35667888999999999999999999988865      6899999999999876 5677776655433322 11     1


Q ss_pred             CCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHh
Q 044696          155 PGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI  217 (220)
Q Consensus       155 ~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~  217 (220)
                      |.|  .+.....+++.++..+-+.    |+|.|.+.++.++|+.....-.    .+.++...|+-
T Consensus       215 ~~f~~~l~~~~~~lR~vV~~ai~~----gipvPalsaaL~Y~ds~~~~~l----panlIQAqRDy  271 (291)
T PF00393_consen  215 PYFAEELKDNQPSLRRVVSLAIEA----GIPVPALSAALSYFDSYRSERL----PANLIQAQRDY  271 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHH----T---HHHHHHHHHHHHHTTSSH----THHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHc----CCChHHHHHHHHHHHhcccCCC----cHHHHHHHHHH
Confidence            223  2445567789999999999    9999999999999886644322    24455555544

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequences are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This entry represents the C-terminal all-alpha domain of 6-phosphogluconate dehydrogenase. The domain contains two structural repeats of 5 helices each. The NAD-binding domain is described in IPR006115 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0050661 NADP binding, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 2ZYD_A 2ZYA_A 3FWN_A 2JKV_E 2ZYG_B 4E21_A 1PGJ_A 1PGP_A 1PGN_A 2PGD_A ....

>PF10728 DUF2520: Domain of unknown function (DUF2520); InterPro: IPR018931 This presumed domain is found C-terminal to a Rossmann-like domain suggesting that these proteins are oxidoreductases

Probab=95.17  E-value=0.52  Score=35.90  Aligned_cols=107  Identities=15%  Similarity=0.122  Sum_probs=65.4

Q ss_pred             eEEecCCHHhHHHHHHHHHHhcc-ceecCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696           60 AIFAAGDSAVVQWLTPLFEVLGK-PTFMGGAGCGQ---SCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA  135 (220)
Q Consensus        60 ~i~~gG~~~~~~~~~~~l~~~~~-~~~~G~~G~a~---~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~  135 (220)
                      ++.+-|+++..+..+.+++.+|. ++.+-+.....   +.=+++|++.    ..+..+..+.++.|+|.+..++++.   
T Consensus         3 ~~~iEgd~~~~~~l~~l~~~lg~~~~~i~~~~r~~yHaAav~asNf~~----~L~~~a~~ll~~~gi~~~~a~~~L~---   75 (132)
T PF10728_consen    3 PFAIEGDEEALEVLQELAKELGGRPFEIDSEQRALYHAAAVFASNFLV----ALYALAAELLEQAGIDFEEALEALL---   75 (132)
T ss_dssp             -EEEEESHHHHHHHHHHHHHTTSEEEE--GGGHHHHHHHHHHHHHHHH----HHHHHHHHHHHHTT-SHHH--HHHH---
T ss_pred             EEEEecCHHHHHHHHHHHHHhCCceEEeCHHhHHHHHHHHHHHHhhHH----HHHHHHHHHHHHcCCCchhHHHHHH---
Confidence            45566699999999999999999 88886544331   1223455443    4566678899999999977666664   


Q ss_pred             CChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhc
Q 044696          136 AGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEES  176 (220)
Q Consensus       136 ~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~  176 (220)
                         |+++.....+.+.......|-...+.|...+....+.+
T Consensus        76 ---PLi~~t~~n~~~~g~~~alTGP~~RgD~~Tv~kHl~~L  113 (132)
T PF10728_consen   76 ---PLIRETLENILQLGPADALTGPAARGDIGTVAKHLAAL  113 (132)
T ss_dssp             ---HHHHHHHHHHHHS-HHHH--SCCHCTHHHHHHHHHHHC
T ss_pred             ---HHHHHHHHHHHhcCchhccCCCcccCCHHHHHHHHHHH
Confidence               45555555554433211334455677777777766666

; PDB: 3D1L_A 2I76_A 3DFU_A.

>PRK14806 bifunctional cyclohexadienyl dehydrogenase/ 3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=94.97  E-value=0.12  Score=50.05  Aligned_cols=83  Identities=19%  Similarity=0.222  Sum_probs=60.3

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcE-EEecCCCChH---Hhhc-----cceeEEe---cCCHHhHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWA-VDAPVSGGDI---GARD-----GKLAIFA---AGDSAVVQWLT   74 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~-ldapV~g~~~---~a~~-----g~l~i~~---gG~~~~~~~~~   74 (220)
                      +.+.++++.+|+|++++.+...+++.+.+....++| -..|+.|+..   .+..     +...+++   .++++.++.++
T Consensus        83 l~~~~~~~~ii~d~~svk~~~~~~l~~~~~~~~~r~~~~hPm~G~~~~g~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~  162 (735)
T PRK14806         83 LKPLLSEHAIVTDVGSTKGNVVDAARAVFGELPAGFVPGHPIAGSEKSGVHAANADLFRNHKVILTPLAETDPAALARVD  162 (735)
T ss_pred             HHHhcCCCcEEEEcCCCchHHHHHHHHhccccCCeEEecCCcCcCCcchhhhhhhHHhCCCeEEEECCCCCCHHHHHHHH
Confidence            344567889999999999988888887775556665 5789886643   1222     3333444   35677889999


Q ss_pred             HHHHHhcc-ceecCCC
Q 044696           75 PLFEVLGK-PTFMGGA   89 (220)
Q Consensus        75 ~~l~~~~~-~~~~G~~   89 (220)
                      ++|+.+|. ++++.+.
T Consensus       163 ~l~~~~G~~~~~~~~~  178 (735)
T PRK14806        163 RLWRAVGADVLHMDVA  178 (735)
T ss_pred             HHHHHcCCEEEEcCHH
Confidence            99999999 8888763

>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=94.85  E-value=1.7  Score=37.78  Aligned_cols=130  Identities=14%  Similarity=0.013  Sum_probs=70.3

Q ss_pred             HHHHHHHhcc---ceecC-CCCHHHHHHHHHHHHHHH-----------------HHHHHHHHHHHHHHcCC--CHHHHH-
Q 044696           73 LTPLFEVLGK---PTFMG-GAGCGQSCKIANQIVVGA-----------------NLLGLSEGLVFADEAGL--DVRKWR-  128 (220)
Q Consensus        73 ~~~~l~~~~~---~~~~G-~~G~a~~~Kl~~n~~~~~-----------------~~~~~aEa~~la~~~Gl--~~~~~~-  128 (220)
                      .+.+.+.|..   ..++. ++-.....|++.|.+...                 ...++.|+..++++.|.  ++++++ 
T Consensus       160 ~~~l~~~l~~~~~~~~~~~Di~g~~~~k~~~N~ia~~~g~~~g~~~~~n~~~~l~~~~~~E~~~v~~a~G~~~~~~~~~g  239 (326)
T PRK14620        160 GSSLISKLSNENLKIIYSQDIIGVQIGAALKNIIAIACGIVLGKNLGNNAHAAVITKGMNEIKTLYSAKNGSIDLNTLIG  239 (326)
T ss_pred             HHHHHHHHCCCCeEEEecCcchhhhhHHHHHHHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHHHHHhCCCCCcchhhc
Confidence            3445555543   33334 355567777777764322                 35678899999999987  788874 


Q ss_pred             -----HHHhccC-CCh--HHHHhhh--hhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHH
Q 044696          129 -----DAVKGGA-AGS--MAMELYG--ERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMV  198 (220)
Q Consensus       129 -----~~l~~~~-~~s--~~~~~~~--~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~  198 (220)
                           |.+.... ..+  ..+-.+.  ..+.++-....-+.-....-+..+.+.+++.    |+++|+.+.+.++.    
T Consensus       240 l~g~gdl~~t~~~~~~rN~~~G~~l~~g~~~~d~~~~~~~~vegi~~~~~v~~~a~~~----~i~~P~~~~l~~~~----  311 (326)
T PRK14620        240 PSCLGDLILTCTTLHSRNMSFGFKIGNGFNINQILSEGKSVIEGFSTVKPLISLAKKL----NIELPICESIYNLL----  311 (326)
T ss_pred             cchhhhhhheecCCCCCcHHHHHHHHCCCCHHHHHHhCCCEeecHHHHHHHHHHHHHh----CCCCCHHHHHHHHH----
Confidence                 5654322 111  1111000  0111000000000011223346788899999    99999999888775    


Q ss_pred             HCCCCCCChHHHHHH
Q 044696          199 ANGDGKFGTQGLVSV  213 (220)
Q Consensus       199 ~~G~g~~d~~av~~~  213 (220)
                         +++.+...+++.
T Consensus       312 ---~~~~~~~~~~~~  323 (326)
T PRK14620        312 ---YENISLEKTISV  323 (326)
T ss_pred             ---hCCCCHHHHHHH
Confidence               355565555443

>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]

Probab=94.66  E-value=2.6  Score=36.28  Aligned_cols=80  Identities=21%  Similarity=0.291  Sum_probs=61.9

Q ss_pred             hhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCC--hHHhhccceeEEecCC---HHhHHHHHHHHHHhc
Q 044696            8 VSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGG--DIGARDGKLAIFAAGD---SAVVQWLTPLFEVLG   81 (220)
Q Consensus         8 ~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~--~~~a~~g~l~i~~gG~---~~~~~~~~~~l~~~~   81 (220)
                      .+++++|.+|.|.+++--.-.+.+.+...+.. +||-+ |+.|+  ...--.++..++.=++   .+.+++++.+++.+|
T Consensus        85 ~~~l~~g~iv~Dv~S~K~~v~~a~~~~~~~~~-~~vg~HPM~G~~~~~~lf~~~~~vltp~~~~~~~~~~~~~~~~~~~g  163 (279)
T COG0287          85 APHLKKGAIVTDVGSVKSSVVEAMEKYLPGDV-RFVGGHPMFGPEADAGLFENAVVVLTPSEGTEKEWVEEVKRLWEALG  163 (279)
T ss_pred             cccCCCCCEEEecccccHHHHHHHHHhccCCC-eeEecCCCCCCcccccccCCCEEEEcCCCCCCHHHHHHHHHHHHHcC
Confidence            44688999999999999888888777776555 88887 89998  4454456667776543   457888999999999


Q ss_pred             c-ceecCC
Q 044696           82 K-PTFMGG   88 (220)
Q Consensus        82 ~-~~~~G~   88 (220)
                      . ++++-+
T Consensus       164 a~~v~~~~  171 (279)
T COG0287         164 ARLVEMDA  171 (279)
T ss_pred             CEEEEcCh
Confidence            8 888875

>PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=93.99  E-value=1.3  Score=39.08  Aligned_cols=148  Identities=14%  Similarity=0.046  Sum_probs=82.8

Q ss_pred             cccee--EEecCCHHhHHHHHHHHHHhccceecC-CCCHHHHHHHHHHHHH-----------------HHHHHHHHHHHH
Q 044696           56 DGKLA--IFAAGDSAVVQWLTPLFEVLGKPTFMG-GAGCGQSCKIANQIVV-----------------GANLLGLSEGLV  115 (220)
Q Consensus        56 ~g~l~--i~~gG~~~~~~~~~~~l~~~~~~~~~G-~~G~a~~~Kl~~n~~~-----------------~~~~~~~aEa~~  115 (220)
                      .|..+  ++.+-+++..+.++.+|..-+-..|.. ++-.-...|.+-|.+.                 .....++.|+..
T Consensus       149 ~g~~t~~via~~~~~~~~~v~~lf~~~~~~v~~s~Di~gve~~~alkNv~aia~G~~~g~~~g~n~~aali~~~~~E~~~  228 (341)
T PRK12439        149 EGYAAAAVLAMPDQHLATRLSPLFRTRRFRVYTTDDVVGVEMAGALKNVFAIAVGMGYSLGIGENTRAMVIARALREMTK  228 (341)
T ss_pred             cCCCeEEEEEeCCHHHHHHHHHHhCCCCEEEEEcCchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHH
Confidence            35543  333345555566666665433223333 4444556666655443                 344567889999


Q ss_pred             HHHHcCCCHHHHHHHHhccCC----ChHHHHh--hhhhhccccCCCCc-----hhhHHHHHHHHHHHHHhhcccCCCCCc
Q 044696          116 FADEAGLDVRKWRDAVKGGAA----GSMAMEL--YGERMIEKDFRPGG-----FAEYMVKDMGMGVDVVEESEDERVVVL  184 (220)
Q Consensus       116 la~~~Gl~~~~~~~~l~~~~~----~s~~~~~--~~~~~~~~~~~~~f-----~~~~~~KD~~~~~~~a~~~~~~~g~~~  184 (220)
                      ++++.|.++++++..-.-+..    .|..-++  .+..+.+|..-...     .+-.-.+-.+.+.+.+++.    ++++
T Consensus       229 ~~~a~G~~~~t~~gl~G~GDl~~Tc~s~~sRN~~~G~~l~~g~~~~~~~~~~~~~~EG~~~~~~~~~~~~~~----~~~~  304 (341)
T PRK12439        229 LGVAMGGNPETFAGLAGMGDLIVTCTSQRSRNRHVGEQLGAGKPIDEIIASMNQVAEGVKAASVVMEFADEY----GLNM  304 (341)
T ss_pred             HHHHhCCCcccccccchhhhhhhhccCCCCccHHHHHHHHCCCCHHHHHHhcCCEEehHHHHHHHHHHHHHh----CCCC
Confidence            999999999988654321110    0100111  12233332110000     1122345567778889999    9999


Q ss_pred             cHHHHHHHHHHHHHHCCCCCCChHHHHHHH
Q 044696          185 PGAALGKQLFSAMVANGDGKFGTQGLVSVI  214 (220)
Q Consensus       185 p~~~~~~~~~~~a~~~G~g~~d~~av~~~~  214 (220)
                      |+...+.+++       +++.|...+++.+
T Consensus       305 Pi~~~~~~il-------~~~~~~~~~~~~l  327 (341)
T PRK12439        305 PIAREVDAVI-------NHGSTVEQAYRGL  327 (341)
T ss_pred             CHHHHHHHHH-------hCCCCHHHHHHHH
Confidence            9999998886       4666777665544

>PTZ00431 pyrroline carboxylate reductase; Provisional

Probab=93.93  E-value=3.4  Score=34.83  Aligned_cols=173  Identities=12%  Similarity=0.033  Sum_probs=97.9

Q ss_pred             hhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhccce
Q 044696            8 VSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGKPT   84 (220)
Q Consensus         8 ~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~~~   84 (220)
                      .+.+.++.+|-+++.++++..+++-   . .....+ --+.+.|.....|. ++++.+   +++..+.++.+|+.+|.++
T Consensus        78 ~~~l~~~~iIS~~aGi~~~~l~~~~---~-~~~~vv-r~mPn~p~~~g~g~-t~i~~~~~~~~~~~~~v~~l~~~~G~~~  151 (260)
T PTZ00431         78 KPYLGSKLLISICGGLNLKTLEEMV---G-VEAKIV-RVMPNTPSLVGQGS-LVFCANNNVDSTDKKKVIDIFSACGIIQ  151 (260)
T ss_pred             HhhccCCEEEEEeCCccHHHHHHHc---C-CCCeEE-EECCCchhHhccee-EEEEeCCCCCHHHHHHHHHHHHhCCcEE
Confidence            3445556788899999988877553   1 111122 23344555555555 444443   4456789999999999966


Q ss_pred             ecCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC-CChHHHHhh--hh-hhccccCCCCch
Q 044696           85 FMGG--AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA-AGSMAMELY--GE-RMIEKDFRPGGF  158 (220)
Q Consensus        85 ~~G~--~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~-~~s~~~~~~--~~-~~~~~~~~~~f~  158 (220)
                      ++-+  .-....+==+.-.+++..+.++.   ..+.+.|++.++..+++.... +...++...  -| .+.+.--+|+-+
T Consensus       152 ~v~E~~~d~~ta~~gsgPA~~~~~~~al~---~~~v~~Gl~~~~a~~l~~~~~~G~a~ll~~~~~~~~~l~~~v~spgG~  228 (260)
T PTZ00431        152 EIKEKDMDIATAISGCGPAYVFLFIESLI---DAGVKNGLNRDVSKNLVLQTILGSVHMVKASDQPVQQLKDDVCSPGGI  228 (260)
T ss_pred             EEChHHcchhhhhcCCHHHHHHHHHHHHH---HHHHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCCCChH
Confidence            6754  23333332222333333344443   356788999999998887654 222333221  22 223322244322


Q ss_pred             hhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696          159 AEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVAN  200 (220)
Q Consensus       159 ~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~  200 (220)
                      .       ...++..++.    |+.--+.+++..-++++.+.
T Consensus       229 T-------~~gl~~le~~----g~~~~~~~a~~aa~~r~~~l  259 (260)
T PTZ00431        229 T-------IVGLYTLEKH----AFKYTVMDAVESACQKSKSM  259 (260)
T ss_pred             H-------HHHHHHHHHC----ChHHHHHHHHHHHHHHHHhc
Confidence            1       2234455666    77777777777777776654

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=92.05  E-value=2.6  Score=35.89  Aligned_cols=115  Identities=14%  Similarity=0.049  Sum_probs=65.8

Q ss_pred             HHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcCCCH--H
Q 044696           70 VQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVG---------------------ANLLGLSEGLVFADEAGLDV--R  125 (220)
Q Consensus        70 ~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~---------------------~~~~~~aEa~~la~~~Gl~~--~  125 (220)
                      .+.+..+|...+. +...-+.-...-.|++.|..+.                     .....+.|...++++.|+++  +
T Consensus       155 ~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~v~~a~G~~~~~~  234 (304)
T PRK06522        155 AEALADLLNAAGLDVEWSPDIRTEIWRKLWVNCVINPLTALLGCTNGELLADPDYRALIRALMEEVAAVAEAEGVHLSVE  234 (304)
T ss_pred             HHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHhchhHHHHHhCCChhHHhcCccHHHHHHHHHHHHHHHHHHcCCCCChH
Confidence            4556666766555 4333346778888888775332                     23355789999999998764  3


Q ss_pred             HHHHHHhcc----C-CChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHH
Q 044696          126 KWRDAVKGG----A-AGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMV  198 (220)
Q Consensus       126 ~~~~~l~~~----~-~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~  198 (220)
                      .+.+.+...    . ..+.+++    .+..+...   -++..   ...+++.+++.    |+|+|..+...++.+...
T Consensus       235 ~~~~~~~~~~~~~~~~~sSm~~----D~~~gr~t---Eid~i---~G~~v~~a~~~----gv~~P~~~~l~~~~~~~~  298 (304)
T PRK06522        235 EVREYVRQVIQKTAANTSSMLQ----DLEAGRPT---EIDAI---VGYVLRRGRKH----GIPTPLNDALYGLLKAKE  298 (304)
T ss_pred             HHHHHHHHHhhccCCCCchHHH----HHHcCCCc---ccchh---ccHHHHHHHHc----CCCCcHHHHHHHHHHHHH
Confidence            333332211    0 0111111    11122211   12222   34578999999    999999988887776543

>PF09130 DUF1932: Domain of unknown function (DUF1932); InterPro: IPR015814 This domain has been found in a number of eukaryotic and prokaryotic proteins, some of which are predicted to be 6-phosphogluconate dehydrogenase, NAD-binding proteins

Probab=91.73  E-value=0.41  Score=32.49  Aligned_cols=69  Identities=13%  Similarity=0.092  Sum_probs=45.0

Q ss_pred             HHHcCCCHHHHHHHHhccCCC-h-HHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHH
Q 044696          117 ADEAGLDVRKWRDAVKGGAAG-S-MAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLF  194 (220)
Q Consensus       117 a~~~Gl~~~~~~~~l~~~~~~-s-~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~  194 (220)
                      |+++|+.. .+++.|..+... . .......+.+..+.+       -....|+.+.++..+.    |++..+..++.+.|
T Consensus         1 A~~~Gv~~-~ll~sl~~s~p~~~~~~~~~~v~~~~~hA~-------Rr~~EM~Eia~tl~~~----g~~~~m~~a~a~~~   68 (73)
T PF09130_consen    1 ARRYGVED-ELLASLAESFPGLDWALAERLVPRMAPHAY-------RRAAEMEEIADTLAEL----GLPPEMFRAAAEVL   68 (73)
T ss_dssp             HHHTT-HH-HHHHHHHHHSCCSCHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHCT----T---HHHHHHHHHH
T ss_pred             CcccccHH-HHHHHHHHHCCcchHHHHHHHcccchhhHH-------HHHHHHHHHHHHHHHc----CCCHHHHHHHHHHH
Confidence            57899995 566777655432 2 234444554443322       3577889999999999    99999999999999


Q ss_pred             HHH
Q 044696          195 SAM  197 (220)
Q Consensus       195 ~~a  197 (220)
                      +..
T Consensus        69 ~~~   71 (73)
T PF09130_consen   69 RRV   71 (73)
T ss_dssp             HHC
T ss_pred             HHh
Confidence            864

; PDB: 3QSG_A 1I36_A 4EZB_A.

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=91.47  E-value=0.16  Score=38.85  Aligned_cols=34  Identities=26%  Similarity=0.345  Sum_probs=28.8

Q ss_pred             cCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe
Q 044696           10 ALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA   45 (220)
Q Consensus        10 ~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda   45 (220)
                      .++++++++|+||+.+.+  ++.++++++|++|+++
T Consensus       105 ~~~~~~~v~D~~~~~~~~--~l~~~~~~~g~~~v~g  138 (155)
T cd01065         105 LLKPGGVVYDVVYNPLET--PLLKEARALGAKTIDG  138 (155)
T ss_pred             HcCCCCEEEEcCcCCCCC--HHHHHHHHCCCceeCC
Confidence            357899999999996655  8999999999988875

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK06249 2-dehydropantoate 2-reductase; Provisional

Probab=91.32  E-value=9  Score=33.13  Aligned_cols=115  Identities=16%  Similarity=0.060  Sum_probs=69.9

Q ss_pred             HhHHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcCCCH-
Q 044696           68 AVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVG---------------------ANLLGLSEGLVFADEAGLDV-  124 (220)
Q Consensus        68 ~~~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~---------------------~~~~~~aEa~~la~~~Gl~~-  124 (220)
                      +..+++..+|+.-+- +....+.-...-.|++.|..+.                     .....+.|+..++++.|++. 
T Consensus       165 ~~~~~l~~~l~~ag~~~~~~~di~~~~W~Kl~~N~~~n~ltal~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a~Gi~~~  244 (313)
T PRK06249        165 ARVEEGAALFRAAGIDSQAMPDLAQARWQKLVWNIPYNGLSVLLNASTDPLMADPDSRALIRALMAEVIQGAAACGHTLP  244 (313)
T ss_pred             HHHHHHHHHHHhCCCCceeCchHHHHHHhHhheecchhHHHHHhCCChHHHHhCccHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            455566677777665 5555667888888988775432                     23345789999999999873 


Q ss_pred             ----HHHHHHHhccCCChHHHHhhhhhhccccCCCC--chhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          125 ----RKWRDAVKGGAAGSMAMELYGERMIEKDFRPG--GFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       125 ----~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~--f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                          +.++++....+..       .+.|.. |+..+  .-++..   ...+++.+++.    |+++|..+...++.+..
T Consensus       245 ~~~~~~~~~~~~~~~~~-------~sSM~q-D~~~gr~tEid~i---~G~vv~~a~~~----Gi~~P~~~~l~~~l~~~  308 (313)
T PRK06249        245 EGYADHMLAVTERMPDY-------RPSMYH-DFEEGRPLELEAI---YANPLAAARAA----GCAMPRVEMLYQALEFL  308 (313)
T ss_pred             hhHHHHHHHHhhcCCCC-------CChHHH-HHHCCCcccHHHH---hhHHHHHHHHh----CCCCcHHHHHHHHHHHH
Confidence                2233333222211       111111 11111  123333   46788999999    99999999988776644

>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]

Probab=91.18  E-value=0.49  Score=38.08  Aligned_cols=70  Identities=17%  Similarity=0.250  Sum_probs=40.9

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHH-HHHHhcC-----CcEEEecC--CCChHHhhccce-eEEecCCHHhHH-HHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIF-KVARERD-----CWAVDAPV--SGGDIGARDGKL-AIFAAGDSAVVQ-WLTP   75 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la-~~~~~~G-----~~~ldapV--~g~~~~a~~g~l-~i~~gG~~~~~~-~~~~   75 (220)
                      .|.++++++++||.-||+.|.+++++. ..+++.+     ..+.-+|-  .-|....+--+. -++.|.+++.-+ +++.
T Consensus       105 ~i~~~l~~~~lvV~~STvppGtt~~~~~~ile~~~~~~~~f~la~~PErl~~G~a~~d~~~~~rvV~G~~~~~~~~~~~~  184 (185)
T PF03721_consen  105 SIAPVLRPGDLVVIESTVPPGTTEELLKPILEKRSGKKEDFHLAYSPERLREGRAIEDFRNPPRVVGGCDDESAEERLKE  184 (185)
T ss_dssp             HHHHHHCSCEEEEESSSSSTTHHHHHHHHHHHHHCCTTTCEEEEE------TTSHHHHHHSSSEEEEEESSHHHHHHHHH
T ss_pred             HHHHHHhhcceEEEccEEEEeeehHhhhhhhhhhcccccCCeEEECCCccCCCCcchhccCCCEEEEeCCcHHHHHHHhc
Confidence            456778899999999999999999655 4444444     36788883  333333333333 444555554333 4443

The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....

>COG0345 ProC Pyrroline-5-carboxylate reductase [Amino acid transport and metabolism]

Probab=90.32  E-value=5.3  Score=34.16  Aligned_cols=139  Identities=14%  Similarity=0.085  Sum_probs=83.9

Q ss_pred             CCChHHhhccceeEEecC--CHHhHHHHHHHHHHhccceecCCC--CHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCC
Q 044696           48 SGGDIGARDGKLAIFAAG--DSAVVQWLTPLFEVLGKPTFMGGA--GCGQSCKIANQIVVGANLLGLSEGLV-FADEAGL  122 (220)
Q Consensus        48 ~g~~~~a~~g~l~i~~gG--~~~~~~~~~~~l~~~~~~~~~G~~--G~a~~~Kl~~n~~~~~~~~~~aEa~~-la~~~Gl  122 (220)
                      --.|..+..|...+..+-  +++..+.+..+|+++|.++++.+.  -..+.+  ..  ..=..+..+.|++. .+.+.|+
T Consensus       117 PNt~a~vg~g~t~i~~~~~~~~~~~~~v~~l~~~~G~v~~v~E~~~da~Tai--sG--SgPAyv~~~iEal~~agv~~Gl  192 (266)
T COG0345         117 PNTPALVGAGVTAISANANVSEEDKAFVEALLSAVGKVVEVEESLMDAVTAL--SG--SGPAYVFLFIEALADAGVRLGL  192 (266)
T ss_pred             CChHHHHcCcceeeecCccCCHHHHHHHHHHHHhcCCeEEechHHhhHHHHH--hc--CCHHHHHHHHHHHHHHHHHcCC
Confidence            345677777776666543  566777899999999997778753  222222  11  11122344566664 4688999


Q ss_pred             CHHHHHHHHhccC-CChHHHHhhh--hhhccccC-CCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHH
Q 044696          123 DVRKWRDAVKGGA-AGSMAMELYG--ERMIEKDF-RPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMV  198 (220)
Q Consensus       123 ~~~~~~~~l~~~~-~~s~~~~~~~--~~~~~~~~-~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~  198 (220)
                      +.++.+++..... +...++....  |..+.++. +|+-+.--..++       .++.    |+.--+.+++...++++.
T Consensus       193 ~~~~A~~l~~~t~~Gaakll~e~~~~p~~Lr~~VtSPGGtTiagl~~-------le~~----g~~~~v~~av~aa~~r~~  261 (266)
T COG0345         193 PREEARELAAQTVAGAAKLLLESGEHPAELRDQVTSPGGTTIAGLRV-------LEED----GFRGAVIEAVEAAYKRSE  261 (266)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCcCCCchHHHHHHH-------HHHh----ChHHHHHHHHHHHHHHHH
Confidence            9999999887654 3333443332  33333333 454433333333       3366    777778888888888777


Q ss_pred             HCC
Q 044696          199 ANG  201 (220)
Q Consensus       199 ~~G  201 (220)
                      +.|
T Consensus       262 el~  264 (266)
T COG0345         262 ELG  264 (266)
T ss_pred             Hhc
Confidence            654

>TIGR01244 conserved hypothetical protein TIGR01244

Probab=89.28  E-value=1.6  Score=33.17  Aligned_cols=60  Identities=12%  Similarity=0.133  Sum_probs=40.4

Q ss_pred             CCEEEecCCC-----CHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc--ceec
Q 044696           14 GAVYVDTTSS-----HPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK--PTFM   86 (220)
Q Consensus        14 g~~ivd~ST~-----~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~--~~~~   86 (220)
                      =++|||+=+.     .|. ...+.+++...|+.|+..||...       .+      +++..+....+|+..-+  .+||
T Consensus        28 iktVIdlR~~~E~~~~p~-~~~~~~~a~~~gl~y~~iPv~~~-------~~------~~~~v~~f~~~~~~~~~pvL~HC   93 (135)
T TIGR01244        28 FKTVINNRPDREEESQPD-FAQIKAAAEAAGVTYHHQPVTAG-------DI------TPDDVETFRAAIGAAEGPVLAYC   93 (135)
T ss_pred             CcEEEECCCCCCCCCCCC-HHHHHHHHHHCCCeEEEeecCCC-------CC------CHHHHHHHHHHHHhCCCCEEEEc
Confidence            4788988653     232 22334566778999999999852       11      55667788888886554  7888


Q ss_pred             C
Q 044696           87 G   87 (220)
Q Consensus        87 G   87 (220)
                      -
T Consensus        94 ~   94 (135)
T TIGR01244        94 R   94 (135)
T ss_pred             C
Confidence            3

No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.

>PRK07634 pyrroline-5-carboxylate reductase; Reviewed

Probab=88.43  E-value=13  Score=30.63  Aligned_cols=81  Identities=9%  Similarity=-0.064  Sum_probs=48.7

Q ss_pred             hHHhhccceeEEe--cCCHHhHHHHHHHHHHhccceecCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH
Q 044696           51 DIGARDGKLAIFA--AGDSAVVQWLTPLFEVLGKPTFMGG--AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRK  126 (220)
Q Consensus        51 ~~~a~~g~l~i~~--gG~~~~~~~~~~~l~~~~~~~~~G~--~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~  126 (220)
                      +.....|...+.+  .++++..+.++.+|+.+|.++++-+  .-..+++=-++-.+++..+.++.+   .+.+.|+++++
T Consensus       125 a~~v~~g~~~~~~~~~~~~~~~~~v~~lf~~~G~~~~~~e~~~~~~~a~~gs~pa~~~~~~~a~~~---~~~~~Gl~~~~  201 (245)
T PRK07634        125 AAEIGKSISLYTMGQSVNETHKETLQLILKGIGTSQLCTEEEVHQLTAVTGSAPAFLYYFAESLIE---ATKSYGVDEET  201 (245)
T ss_pred             HHHHhcCCeEEeeCCCCCHHHHHHHHHHHHhCCCEEEECHHHcchHHhhhcchHHHHHHHHHHHHH---HHHHcCCCHHH
Confidence            3455556434433  3567788999999999999445653  222222222222233333444443   47889999999


Q ss_pred             HHHHHhcc
Q 044696          127 WRDAVKGG  134 (220)
Q Consensus       127 ~~~~l~~~  134 (220)
                      -.+++...
T Consensus       202 a~~~~~~~  209 (245)
T PRK07634        202 AKHLVIQM  209 (245)
T ss_pred             HHHHHHHH
Confidence            88887653

>PRK11861 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase; Provisional

Probab=88.30  E-value=26  Score=33.94  Aligned_cols=83  Identities=14%  Similarity=0.220  Sum_probs=61.4

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCChH-Hh-------hccceeEEec---CCHHhHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGGDI-GA-------RDGKLAIFAA---GDSAVVQWLT   74 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~~~-~a-------~~g~l~i~~g---G~~~~~~~~~   74 (220)
                      +.+.++++++|.|.+++--.-.+++.+.+.....+||-+ |+.|... +.       =+|...+++=   .+.+++++++
T Consensus        17 ~~~~~~~~~~vtDv~SvK~~i~~~~~~~l~~~~~~fvg~HPMaG~e~~G~~~a~~~Lf~~~~~il~p~~~~~~~~~~~~~   96 (673)
T PRK11861         17 IAPFLDASTIVTDAGSTKSDVVAAARAALGARIGQFVPGHPIAGRESSGVDAALADLYVGRNVVLCALPENAPDALARVE   96 (673)
T ss_pred             HhhhCCCCcEEEecCcccHHHHHHHHHhccccCCeEEecCCcCcCcchhhhhhChhHhCCCeEEEecCCCCCHHHHHHHH
Confidence            456788999999999999888887776655433568877 7776532 21       2566677773   3567889999


Q ss_pred             HHHHHhcc-ceecCCC
Q 044696           75 PLFEVLGK-PTFMGGA   89 (220)
Q Consensus        75 ~~l~~~~~-~~~~G~~   89 (220)
                      .+++.+|. ++.+.+.
T Consensus        97 ~l~~~~Ga~~~~~~~~  112 (673)
T PRK11861         97 AMWRAARADVRAMSAE  112 (673)
T ss_pred             HHHHHcCCEEEECCHH
Confidence            99999999 8888763

>PRK08818 prephenate dehydrogenase; Provisional

Probab=87.78  E-value=20  Score=32.13  Aligned_cols=76  Identities=14%  Similarity=0.233  Sum_probs=54.6

Q ss_pred             cCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCCh-HHhhccceeEEecCCH-HhHHHHHHHHHHhcc-cee
Q 044696           10 ALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGGD-IGARDGKLAIFAAGDS-AVVQWLTPLFEVLGK-PTF   85 (220)
Q Consensus        10 ~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~~-~~a~~g~l~i~~gG~~-~~~~~~~~~l~~~~~-~~~   85 (220)
                      .+++|++|.|.+++--.-.+.+    .+.+++||-. |+.|+. .+.-.+...+++-+.. +.++.++.+++.+|. ++.
T Consensus        77 ~l~~~~iVtDVgSvK~~i~~~~----~~~~~~fVG~HPMaG~E~s~lf~g~~~iltp~~~~~~~~~v~~l~~~~Ga~v~~  152 (370)
T PRK08818         77 GRAAGQLWLDVTSIKQAPVAAM----LASQAEVVGLHPMTAPPKSPTLKGRVMVVCEARLQHWSPWVQSLCSALQAECVY  152 (370)
T ss_pred             CCCCCeEEEECCCCcHHHHHHH----HhcCCCEEeeCCCCCCCCCcccCCCeEEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence            3689999999999986665544    3446678877 888874 3333566677775543 346788999999999 888


Q ss_pred             cCCC
Q 044696           86 MGGA   89 (220)
Q Consensus        86 ~G~~   89 (220)
                      +-+.
T Consensus       153 ~~ae  156 (370)
T PRK08818        153 ATPE  156 (370)
T ss_pred             cCHH
Confidence            8753

>COG0362 Gnd 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism]

Probab=87.25  E-value=23  Score=32.24  Aligned_cols=108  Identities=11%  Similarity=0.110  Sum_probs=81.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhccC-CChHHHHhhhhhhccc------cCCC
Q 044696           89 AGCGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKGGA-AGSMAMELYGERMIEK------DFRP  155 (220)
Q Consensus        89 ~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~------~~~~  155 (220)
                      -.....+.-+.+.+.++-+.++++++.+.++      .+++..++..+++.+. -.|.+++.......+.      -++|
T Consensus       313 ~dk~~fi~~vr~ALy~sKI~sYAQGF~~l~~AS~e~gW~l~~~~iA~iWR~GCIIRs~FL~~I~~af~~~p~l~nLl~~p  392 (473)
T COG0362         313 GDKEEFIEDVRQALYASKIVSYAQGFALLRAASKEYGWDLNLGEIALIWRGGCIIRSKFLDKITDAFDENPELANLLLAP  392 (473)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHhccceehHHHHHHHHHHHhcCcchhhhhcCH
Confidence            4566778888999999999999999988765      5788889999998876 4566665443322211      1123


Q ss_pred             Cc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696          156 GG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVAN  200 (220)
Q Consensus       156 ~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~  200 (220)
                      -|  -+....+++|-++..+-+.    |+|+|....+..+|+.-...
T Consensus       393 yF~~~~~~~~~~~R~vV~~a~~~----giP~P~~ssalsy~Dsyr~~  435 (473)
T COG0362         393 YFKSILEEYQQSLRRVVAYAVEA----GIPVPAFSSALSYYDSYRTA  435 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhc----CCCchHHHHHHHHHHHhhhc
Confidence            34  3666788899999999999    99999999999999876554

>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=86.47  E-value=22  Score=31.21  Aligned_cols=116  Identities=19%  Similarity=0.154  Sum_probs=74.3

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhcc-
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGK-   82 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~-   82 (220)
                      +.+.++++. ||.+||++ -...++++.+... -+++=.=-...|...   .|+=++.|   ++++++++..+++.+|+ 
T Consensus       105 l~~~~~~~a-IlaSnTS~-l~~s~la~~~~~p-~R~~g~HffnP~~~~---pLVEVv~g~~T~~e~~~~~~~f~~~lGk~  178 (321)
T PRK07066        105 ISRAAKPDA-IIASSTSG-LLPTDFYARATHP-ERCVVGHPFNPVYLL---PLVEVLGGERTAPEAVDAAMGIYRALGMR  178 (321)
T ss_pred             HHHhCCCCe-EEEECCCc-cCHHHHHHhcCCc-ccEEEEecCCccccC---ceEEEeCCCCCCHHHHHHHHHHHHHcCCE
Confidence            445566665 88888884 3555666666432 233333222222211   34445555   45788999999999998 


Q ss_pred             ceecC-C-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCC
Q 044696           83 PTFMG-G-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAG  137 (220)
Q Consensus        83 ~~~~G-~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~  137 (220)
                      .+.+. + +|.      +.|=   .....+.|++.+.+.-..+++++=.++..+.+.
T Consensus       179 pV~v~kd~pGF------i~NR---l~~a~~~EA~~lv~eGvas~edID~a~~~g~g~  226 (321)
T PRK07066        179 PLHVRKEVPGF------IADR---LLEALWREALHLVNEGVATTGEIDDAIRFGAGI  226 (321)
T ss_pred             eEecCCCCccH------HHHH---HHHHHHHHHHHHHHhCCCCHHHHHHHHHhCCCC
Confidence            88885 5 662      3333   334578899999999889999988887766543

>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase

Probab=85.66  E-value=20  Score=30.09  Aligned_cols=113  Identities=17%  Similarity=0.122  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcCCCHHH-
Q 044696           70 VQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVG---------------------ANLLGLSEGLVFADEAGLDVRK-  126 (220)
Q Consensus        70 ~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~---------------------~~~~~~aEa~~la~~~Gl~~~~-  126 (220)
                      .+++..+|..-+- +....+.-...-.|++.|..+.                     .....+.|.+.++++.|+++.. 
T Consensus       148 ~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~v~~a~G~~~~~~  227 (293)
T TIGR00745       148 VEALAELLNEAGIPAELHGDILAAIWKKLLVNAAINPLTALLDCKNGELLENPEARELLRRLMDEVVRVARAEGVDLPDD  227 (293)
T ss_pred             HHHHHHHHHhCCCCCEecchHHHHHHHHHhheechhHHHHHHCCccceeccChhHHHHHHHHHHHHHHHHHhCCCCCCHH
Confidence            4455555655444 4444557778888888776322                     2345588999999999976433 


Q ss_pred             -HHHHHhc----cCCC-hHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696          127 -WRDAVKG----GAAG-SMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA  196 (220)
Q Consensus       127 -~~~~l~~----~~~~-s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~  196 (220)
                       +.+.+..    .+.. +.+++    .+.++..   .-++.+   ...+++.+++.    |+|+|..+...+..+.
T Consensus       228 ~~~~~~~~~~~~~~~~~sSm~~----D~~~gr~---tEid~i---~G~~v~~a~~~----gv~~P~~~~l~~~~~~  289 (293)
T TIGR00745       228 EVEELVRAVIRMTAENTSSMLQ----DLLRGRR---TEIDAI---NGAVVRLAEKL----GIDAPVNRTLYALLKA  289 (293)
T ss_pred             HHHHHHHHHHhcCCCCCChHHH----HHHcCCc---chHHHh---ccHHHHHHHHc----CCCCChHHHHHHHHHH
Confidence             2222221    1100 11111    0111110   112222   35678889999    9999999988777654

This model describes enzymes that perform as 2-dehydropantoate 2-reductase, one of four enzymes required for the de novo biosynthesis of pantothenate (vitamin B5) from Asp and 2-oxoisovalerate. Although few members of the seed alignment are characterized experimentally, nearly all from complete genomes are found in a genome-wide (but not local) context of all three other pantothenate-biosynthetic enzymes (TIGR00222, TIGR00018, TIGR00223). The gene encoding this enzyme is designated apbA in Salmonella typhimurium and panE in Escherichia coli; this protein functions as a monomer and functions in the alternative pyrimidine biosynthetic, or APB, pathway, used to synthesize the pyrimidine moiety of thiamine. Note, synthesis of the pyrimidine moiety of thiamine occurs either via the first five steps in de novo purine biosynthesis, which uses the pur gene products, or through the APB pathway. Note that this family includes both NADH and NADPH

>TIGR00112 proC pyrroline-5-carboxylate reductase

Probab=85.54  E-value=20  Score=29.90  Aligned_cols=117  Identities=10%  Similarity=0.027  Sum_probs=69.7

Q ss_pred             CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC--CHHhHHHHHHHHHHhccceecCC-
Q 044696           12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG--DSAVVQWLTPLFEVLGKPTFMGG-   88 (220)
Q Consensus        12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG--~~~~~~~~~~~l~~~~~~~~~G~-   88 (220)
                      .++++||.++..-+-.  ++.+.+. .+..++ --+-..+.....|...+..+.  +++..+.++.+|+.+|.++++.+ 
T Consensus        68 ~~~~~ivS~~agi~~~--~l~~~~~-~~~~iv-R~mPn~~~~~~~g~t~~~~~~~~~~~~~~~v~~lf~~~G~~~~v~E~  143 (245)
T TIGR00112        68 GKDKLLISIAAGVTLE--KLSQLLG-GTRRVV-RVMPNTPAKVGAGVTAIAANANVSEEDRALVLALFKAVGEVVELPEA  143 (245)
T ss_pred             cCCCEEEEecCCCCHH--HHHHHcC-CCCeEE-EECCChHHHHhCCeEEEecCCCCCHHHHHHHHHHHHhCCCEEEECHH
Confidence            4566777664443322  3333332 112222 223344555556665554442  34556789999999999666764 


Q ss_pred             -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696           89 -AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA  135 (220)
Q Consensus        89 -~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~  135 (220)
                       .-....+--+...+++..+.++.+   .+.+.|+++++..+++....
T Consensus       144 ~~~~~talsgsgPA~~~~~~~al~~---~~v~~Gl~~~~A~~lv~~~~  188 (245)
T TIGR00112       144 LMDAVTALSGSGPAYVFLFIEALAD---AGVKQGLPRELALELAAQTV  188 (245)
T ss_pred             HcchHHhhccCcHHHHHHHHHHHHH---HHHHcCCCHHHHHHHHHHHH
Confidence             444555544556666666666665   46778999999999887654

This enzyme catalyzes the final step in proline biosynthesis. Among the four paralogs in Bacillus subtilis (proG, proH, proI, and comER), ComER is the most divergent and does not prevent proline auxotrophy from mutation of the other three. It is excluded from the seed and scores between the trusted and noise cutoffs.

>TIGR03376 glycerol3P_DH glycerol-3-phosphate dehydrogenase (NAD(+))

Probab=84.49  E-value=16  Score=32.29  Aligned_cols=136  Identities=14%  Similarity=0.007  Sum_probs=75.2

Q ss_pred             eeEEecCC----HHhHHHHHHHHHHhcc-ceecC-C-CCH--HHHHHH--------------HHHHHHHHHHHHHHHHHH
Q 044696           59 LAIFAAGD----SAVVQWLTPLFEVLGK-PTFMG-G-AGC--GQSCKI--------------ANQIVVGANLLGLSEGLV  115 (220)
Q Consensus        59 l~i~~gG~----~~~~~~~~~~l~~~~~-~~~~G-~-~G~--a~~~Kl--------------~~n~~~~~~~~~~aEa~~  115 (220)
                      ...+.+-+    .+..+.++.+|.. .. .+|.. + .|.  +.++|=              =.|.-.+....++.|...
T Consensus       160 ~~~ia~~~~~~~~~~a~~~~~lf~~-~~frv~~s~Dv~GvEl~galKNv~AIa~Gi~~Gl~~g~N~~aalitrgl~Em~~  238 (342)
T TIGR03376       160 ETTVGYRDPADFDVDARVLKALFHR-PYFRVNVVDDVAGVEIAGALKNVVAIAAGFVDGLGWGDNAKAAVMRRGLLEMIK  238 (342)
T ss_pred             eEEEEeCCCcchHHHHHHHHHHhCC-CCEEEEEcCCcccchhhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            44455555    5555666666652 11 33333 2 343  555552              247777777888999999


Q ss_pred             HHHHcCCCHH--HHHH------HHhccCCChHHHHhhhhhhccccCCCCchhhHH------------HHHHHHHHHHHhh
Q 044696          116 FADEAGLDVR--KWRD------AVKGGAAGSMAMELYGERMIEKDFRPGGFAEYM------------VKDMGMGVDVVEE  175 (220)
Q Consensus       116 la~~~Gl~~~--~~~~------~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~------------~KD~~~~~~~a~~  175 (220)
                      +++..|=+++  +++.      ++-.... |.- ...+.++.++    +.+++..            ..-.+.+.+.+++
T Consensus       239 l~~~~g~~~~~~T~~gl~G~GDL~~Tc~s-sRN-~~~G~~l~~~----g~~~~~~~~~~~~~~~vEG~~t~~~~~~l~~~  312 (342)
T TIGR03376       239 FARMFFPTGEVTFTFESCGVADLITTCLG-GRN-FKVGRAFAKT----GKSLEELEKELLNGQSLQGVATAKEVHELLKN  312 (342)
T ss_pred             HHHHhCCCCCCCcccccchhhhhhheeec-Ccc-HHHHHHHHhc----CCCHHHHHHhhcCCcEEeeHHHHHHHHHHHHH
Confidence            9999998776  6643      3322211 110 0112223220    1122222            2234566677788


Q ss_pred             cccCCCCC--ccHHHHHHHHHHHHHHCCCCCCChHHHHH
Q 044696          176 SEDERVVV--LPGAALGKQLFSAMVANGDGKFGTQGLVS  212 (220)
Q Consensus       176 ~~~~~g~~--~p~~~~~~~~~~~a~~~G~g~~d~~av~~  212 (220)
                      .    ++.  +|+.+++.+++       +++.+...+++
T Consensus       313 ~----~i~~~~Pi~~~vy~il-------~~~~~~~~~~~  340 (342)
T TIGR03376       313 K----NKDDEFPLFEAVYQIL-------YEGLPPKKLPE  340 (342)
T ss_pred             c----CCCcCCCHHHHHHHHH-------hCCCCHHHHHh
Confidence            8    999  99999988876       34455555443

Members of this protein family are the eukaryotic enzyme, glycerol-3-phosphate dehydrogenase (NAD(+)) (EC 1.1.1.8). Enzymatic activity for 1.1.1.8 is defined as sn-glycerol 3-phosphate + NAD(+) = glycerone phosphate + NADH. Note the very similar reactions of enzymes defined as EC 1.1.1.94 and 1.1.99.5, assigned to families of proteins in the bacteria.

>PLN02256 arogenate dehydrogenase

Probab=83.71  E-value=5.1  Score=34.79  Aligned_cols=78  Identities=18%  Similarity=0.191  Sum_probs=52.6

Q ss_pred             hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCChHH--hhccceeEEecC--------CHHhHHHHHHHH
Q 044696            9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGGDIG--ARDGKLAIFAAG--------DSAVVQWLTPLF   77 (220)
Q Consensus         9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~~~~--a~~g~l~i~~gG--------~~~~~~~~~~~l   77 (220)
                      +.+.++++|+|.+++.-...+.+.+.+. .+.+|+-+ |+.|....  ..++. .++...        +++.++.++.++
T Consensus       115 ~~l~~~~iviDv~SvK~~~~~~~~~~l~-~~~~~V~~HPmaG~e~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~l~~l~  192 (304)
T PLN02256        115 QRLKRSTLFVDVLSVKEFPKNLLLQVLP-EEFDILCTHPMFGPESGKGGWAGL-PFVYDKVRIGDEGEREARCERFLDIF  192 (304)
T ss_pred             hccCCCCEEEecCCchHHHHHHHHHhCC-CCCeEEecCCCCCCCCCccccCCC-eEEEecceecCCCCCHHHHHHHHHHH
Confidence            3467899999999976666666665553 35667666 77765432  22333 333332        567889999999


Q ss_pred             HHhcc-ceecCC
Q 044696           78 EVLGK-PTFMGG   88 (220)
Q Consensus        78 ~~~~~-~~~~G~   88 (220)
                      +.+|. ++.+-+
T Consensus       193 ~~lGa~v~~~~~  204 (304)
T PLN02256        193 EEEGCRMVEMSC  204 (304)
T ss_pred             HHCCCEEEEeCH
Confidence            99999 888875

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=83.62  E-value=0.92  Score=38.50  Aligned_cols=35  Identities=17%  Similarity=0.179  Sum_probs=29.3

Q ss_pred             hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe
Q 044696            9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA   45 (220)
Q Consensus         9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda   45 (220)
                      +.++++.+++|+++..+++  .+.++++++|+.++|+
T Consensus       202 ~~l~~~~~v~D~~y~p~~T--~ll~~A~~~G~~~vdG  236 (270)
T TIGR00507       202 EKLKEGMVVYDMVYNPGET--PFLAEAKSLGTKTIDG  236 (270)
T ss_pred             HHcCCCCEEEEeccCCCCC--HHHHHHHHCCCeeeCC
Confidence            3467889999999988877  6888999999988875

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK12491 pyrroline-5-carboxylate reductase; Reviewed

Probab=83.53  E-value=27  Score=29.73  Aligned_cols=138  Identities=12%  Similarity=0.050  Sum_probs=77.4

Q ss_pred             CCChHHhhccceeEEecC--CHHhHHHHHHHHHHhccceecCC--CCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCC
Q 044696           48 SGGDIGARDGKLAIFAAG--DSAVVQWLTPLFEVLGKPTFMGG--AGCGQSCKIANQIVVGANLLGLSEGL-VFADEAGL  122 (220)
Q Consensus        48 ~g~~~~a~~g~l~i~~gG--~~~~~~~~~~~l~~~~~~~~~G~--~G~a~~~Kl~~n~~~~~~~~~~aEa~-~la~~~Gl  122 (220)
                      --.|.....|...+..+.  +++..+.++.+|+++|.++++.+  .-...++==+.-.++    ..+.|++ ..+.+.|+
T Consensus       120 PN~~~~vg~g~t~~~~~~~~~~~~~~~v~~lf~~~G~~~~~~E~~~d~~talsgsgPAf~----~~~~eal~~a~v~~Gl  195 (272)
T PRK12491        120 PNTPVLVGEGMSALCFNEMVTEKDIKEVLNIFNIFGQTEVVNEKLMDVVTSISGSSPAYV----YMFIEAMADAAVLGGM  195 (272)
T ss_pred             CChHHHHcCceEEEEeCCCCCHHHHHHHHHHHHcCCCEEEEcHHHhhhHHHhccCcHHHH----HHHHHHHHHHHHHcCC
Confidence            344566666665555433  23456789999999999666654  233333322222233    3344444 34677899


Q ss_pred             CHHHHHHHHhccCC-ChHHHHh--hhhh-hccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHH
Q 044696          123 DVRKWRDAVKGGAA-GSMAMEL--YGER-MIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMV  198 (220)
Q Consensus       123 ~~~~~~~~l~~~~~-~s~~~~~--~~~~-~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~  198 (220)
                      +.++-.+++..... ...++..  .-|. +.+.--+|+-+.       ...++..++.    |+.--+.+++..-++++.
T Consensus       196 ~~~~A~~l~~~t~~G~a~ll~~~~~~p~~l~~~V~sPGGtT-------~~gl~~le~~----~~~~~~~~av~aa~~r~~  264 (272)
T PRK12491        196 PRKQAYKFAAQAVLGSAKMVLETGIHPGELKDMVCSPGGTT-------IEAVATLEEK----GLRTAIISAMKRCTQKSM  264 (272)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCCCchHH-------HHHHHHHHHC----ChHHHHHHHHHHHHHHHH
Confidence            99999888876542 2223321  1122 222222343221       2334555666    888778888888877776


Q ss_pred             HC
Q 044696          199 AN  200 (220)
Q Consensus       199 ~~  200 (220)
                      +.
T Consensus       265 el  266 (272)
T PRK12491        265 EM  266 (272)
T ss_pred             HH
Confidence            54

>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]

Probab=81.30  E-value=22  Score=30.88  Aligned_cols=127  Identities=14%  Similarity=0.062  Sum_probs=79.3

Q ss_pred             eEEecCCHHhHHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHH
Q 044696           60 AIFAAGDSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVG---------------------ANLLGLSEGLVFA  117 (220)
Q Consensus        60 ~i~~gG~~~~~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~---------------------~~~~~~aEa~~la  117 (220)
                      ..+.|+.++.++.+..+|+.-+- +.+-.+.=...-.|++.|+.+.                     .....+.|....+
T Consensus       147 g~~~~~~~~~~~~i~~~~~~a~~~~~~~~di~~~~w~Kl~~N~~inpltall~~~~g~l~~~~~~~~l~~~~~~E~~~v~  226 (307)
T COG1893         147 GELRGGRDELVKALAELFKEAGLEVELHPDILAAIWRKLVVNAAINPLTALLDCNNGELLENPEARALIRALVAEVVAVA  226 (307)
T ss_pred             ccCCCCchHHHHHHHHHHHhCCCCeEEcHHHHHHHHHHHHhhhccchhhhhhcCCchHHhcChhHHHHHHHHHHHHHHHH
Confidence            34556666777888888866555 5554557788888998887654                     2345678888899


Q ss_pred             HHcC--CCHH---HHHHHHhccC--CChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHH
Q 044696          118 DEAG--LDVR---KWRDAVKGGA--AGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       118 ~~~G--l~~~---~~~~~l~~~~--~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                      ++.|  ++.+   .+..+.....  ..|.+.+..    ..+..   --++..   ...+++.++..    |+++|..+..
T Consensus       227 ~~~g~~~~~~~~~~v~~~~~~~~~~~~sSM~qDl----~~gr~---tEid~i---~G~vv~~a~~~----gi~~P~~~~L  292 (307)
T COG1893         227 RAEGVELPEEVVERVLAVIRATDAENYSSMLQDL----EKGRP---TEIDAI---NGAVVRLAKKH----GLATPVNDTL  292 (307)
T ss_pred             HhccCCCCHHHHHHHHHHHHhcccccCchHHHHH----HcCCc---ccHHHH---hhHHHHHHHHh----CCCCcHHHHH
Confidence            9988  5553   3334444331  222222211    11111   112222   35678899999    9999999999


Q ss_pred             HHHHHHHHHC
Q 044696          191 KQLFSAMVAN  200 (220)
Q Consensus       191 ~~~~~~a~~~  200 (220)
                      .++.+.....
T Consensus       293 ~~lvk~~e~~  302 (307)
T COG1893         293 YALLKAKEAE  302 (307)
T ss_pred             HHHHHHHHHh
Confidence            9888766553

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	220
1yb4_A	295	Crystal Structure Of The Tartronic Semialdehyde Red		5e-31
4dll_A	320	Crystal Structure Of A 2-Hydroxy-3-Oxopropionate Re		6e-24
3cky_A	301	Structural And Kinetic Properties Of A Beta-Hydroxy		4e-20
1vpd_A	299	X-Ray Crystal Structure Of Tartronate Semialdehyde		2e-19
2uyy_A	316	Structure Of The Cytokine-Like Nuclear Factor N-Pac		6e-14
3doj_A	310	Structure Of Glyoxylate Reductase 1 From Arabidopsi		2e-13
3obb_A	300	Crystal Structure Of A Possible 3-Hydroxyisobutyrat		3e-13
3q3c_A	299	Crystal Structure Of A Serine Dehydrogenase From Ps		3e-13
1wp4_A	289	Structure Of Tt368 Protein From Thermus Thermophilu		1e-12
2cvz_A	289	Structure Of Hydroxyisobutyrate Dehydrogenase From		2e-12
3pef_A	287	Crystal Structure Of Gamma-Hydroxybutyrate Dehydrog		2e-11
2gf2_A	296	Crystal Structure Of Human Hydroxyisobutyrate Dehyd		5e-09
2i9p_A	319	Crystal Structure Of Human Hydroxyisobutyrate Dehyd		5e-09
3pdu_A	287	Crystal Structure Of Gamma-Hydroxybutyrate Dehydrog		1e-08
3g0o_A	303	Crystal Structure Of 3-Hydroxyisobutyrate Dehydroge		9e-08
3qha_A	296	Crystal Structure Of A Putative Oxidoreductase From		2e-06

>pdb|1YB4|A Chain A, Crystal Structure Of The Tartronic Semialdehyde Reductase From Salmonella Typhimurium Lt2 Length = 295

Iteration: 1
 Score =  130 bits (328), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 14  GAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWL 73
           G   VD +S  P   +   +   E     +DAPVSGG+IGAR+G L+I   G+  V   +
Sbjct: 89  GKTIVDXSSISPIETKRFAQRVNEXGADYLDAPVSGGEIGAREGTLSIXVGGEQKVFDRV 148
Query: 74  TPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVK 132
            PLF++LGK  T +GG G GQ+CK+ANQI+V  N+  +SE LVFA +AG D  + R A+ 
Sbjct: 149 KPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALX 208
Query: 133 GGAAGSMAMELYGERMIEKDFRPGGFAEYXXXXXXXXXXXXXXXXXXXXXXLPGAALGKQ 192
           GG A S  +E++GER I + F PG    +                      LP  A  ++
Sbjct: 209 GGFASSRILEVHGERXINRTFEPG----FKIALHQKDLNLALQSAKALALNLPNTATCQE 264
Query: 193 LFSAMVANGDGKFGTQGLVSVIE 215
           LF+   ANG  +      V  +E
Sbjct: 265 LFNTCAANGGSQLDHSAXVQALE 287

>pdb|4DLL|A Chain A, Crystal Structure Of A 2-Hydroxy-3-Oxopropionate Reductase From Polaromonas Sp. Js666 Length = 320

Iteration: 1
 Score =  107 bits (266), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 57/151 (37%), Positives = 86/151 (56%)
Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
            G+ +A  PG++++D  S  P  AR+            +D PVSGG +GA  G L I A 
Sbjct: 108 QGVAAAXKPGSLFLDXASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIXAG 167
Query: 65  GDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
           G  A  +   PL +V G+ T +G  G GQ  K+ANQ +VG  +  ++E L+FA + G D 
Sbjct: 168 GKPADFERSLPLLKVFGRATHVGPHGSGQLTKLANQXIVGITIGAVAEALLFATKGGADX 227
Query: 125 RKWRDAVKGGAAGSMAMELYGERMIEKDFRP 155
            K ++A+ GG A S  ++L+G+R +E+DF P
Sbjct: 228 AKVKEAITGGFADSRVLQLHGQRXVERDFAP 258

>pdb|3CKY|A Chain A, Structural And Kinetic Properties Of A Beta-Hydroxyacid Dehydrogenase Involved In Nicotinate Fermentation Length = 301

Iteration: 1
 Score = 94.7 bits (234), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 100/217 (46%), Gaps = 4/217 (1%)
Query: 4   PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA 63
           P G++SA   G V VD +S  P+   ++ KVA E+    VDAPVSGG  GA  G L I  
Sbjct: 81  PGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMV 140
Query: 64  AGDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGL 122
               AV + + P+  V+GK  + +G  G G + KI N +++G N+  L+E LV   + GL
Sbjct: 141 GASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGL 200
Query: 123 DVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYXXXXXXXXXXXXXXXXXXXXX 182
                ++ +   +  S AME   E+ I      GGFA                       
Sbjct: 201 KPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFA---MDLQHKDLGLALEAGKEGNV 257
Query: 183 XLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
            LP  A+  Q+F    A G G+     ++ V E++ G
Sbjct: 258 PLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQMTG 294

>pdb|1VPD|A Chain A, X-Ray Crystal Structure Of Tartronate Semialdehyde Reductase [salmonella Typhimurium Lt2] Length = 299

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 1/157 (0%)
Query: 1   ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
           AL  +GI+    PG V +D +S  P  +REI    + +    +DAPVSGG+  A DG L+
Sbjct: 79  ALGENGIIEGAKPGTVLIDXSSIAPLASREISDALKAKGVEXLDAPVSGGEPKAIDGTLS 138
Query: 61  IFAAGDSAVVQWLTPLFEVL-GKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
           +   GD A+      L +   G     G  G G   K+ANQ++V  N+   SE L  A +
Sbjct: 139 VXVGGDKAIFDKYYDLXKAXAGSVVHTGDIGAGNVTKLANQVIVALNIAAXSEALTLATK 198
Query: 120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPG 156
           AG++      A++GG AGS  ++     + +++F+PG
Sbjct: 199 AGVNPDLVYQAIRGGLAGSTVLDAKAPXVXDRNFKPG 235

>pdb|2UYY|A Chain A, Structure Of The Cytokine-Like Nuclear Factor N-Pac Length = 316

Iteration: 1
 Score = 73.9 bits (180), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 1/161 (0%)
Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L P G++  + PG  YVD ++       E+ +V   R    ++APVSG    + DG L I
Sbjct: 105 LGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 164
Query: 62  FAAGDSAVVQWLTPLFEVLGKPT-FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
            AAGD  + +  +  F+ +GK + F+G  G      +   +V G+ +  ++EGL  A   
Sbjct: 165 LAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVT 224
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEY 161
           G   +   D +  G   S+ ++   + +++ +F+P  + +Y
Sbjct: 225 GQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKY 265

>pdb|3DOJ|A Chain A, Structure Of Glyoxylate Reductase 1 From Arabidopsis (Atglyr1) Length = 310

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
            D  G++  +  G  Y+D ++     + +I +    +    V+ PVSG    A DG+L I
Sbjct: 96  FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLII 155
Query: 62  FAAGDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
            AAGD A+ +   P F+VLGK +F +G  G G   K+   +++G+ +   SEGLV AD++
Sbjct: 156 LAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKS 215
Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRP 155
           GL      D +  GA  +   +  G  M +  + P
Sbjct: 216 GLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPP 250

>pdb|3OBB|A Chain A, Crystal Structure Of A Possible 3-Hydroxyisobutyrate Dehydrogenase From Pseudomonas Aeruginosa Pao1 Length = 300

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           LD DG+++ + PG + ++ ++  P  AR+I   ARER    +DAPVSGG  GA  G L  
Sbjct: 78  LDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAXLDAPVSGGTAGAAAGTLTF 137
Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGA-GCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
              GD+  ++   PLFE  G+  F  G  G GQ  K+ N  ++    +G +E        
Sbjct: 138 XVGGDAEALEKARPLFEAXGRNIFHAGPDGAGQVAKVCNNQLLAVLXIGTAEAXALGVAN 197
Query: 121 GLDVRKWRDAVKGGAAGSMAMELY 144
           GL+ +   +  +  + G+ A+E+Y
Sbjct: 198 GLEAKVLAEIXRRSSGGNWALEVY 221

>pdb|3Q3C|A Chain A, Crystal Structure Of A Serine Dehydrogenase From Pseudomonas Aeruginosa Pao1 In Complex With Nad Length = 299

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           LD DG+++ + PG + ++ ++  P  AR+I   ARER    +DAPVSGG  GA  G L  
Sbjct: 77  LDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAXLDAPVSGGTAGAAAGTLTF 136
Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGA-GCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
              GD+  ++   PLFE  G+  F  G  G GQ  K+ N  ++    +G +E        
Sbjct: 137 XVGGDAEALEKARPLFEAXGRNIFHAGPDGAGQVAKVCNNQLLAVLXIGTAEAXALGVAN 196
Query: 121 GLDVRKWRDAVKGGAAGSMAMELY 144
           GL+ +   +  +  + G+ A+E+Y
Sbjct: 197 GLEAKVLAEIXRRSSGGNWALEVY 220

>pdb|1WP4|A Chain A, Structure Of Tt368 Protein From Thermus Thermophilus Hb8 Length = 289

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
           + +   L  G  +VD TS  P  +R + +  RE+    +DAPVSGG  GA  G L +   
Sbjct: 74  EALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLG 133
Query: 65  GDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
           G    V+ + P      K   +G  G G + K  N  ++  NL    EGL+   + G+  
Sbjct: 134 GPEEAVERVRPFLAYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSA 193
Query: 125 RKWRDAVKGGAAGSMAME-LYGERMIEKDFRPGGFA 159
            K  + +   +  S A E L  +R++ + F P  FA
Sbjct: 194 EKALEVINASSGRSNATENLIPQRVLTRAF-PKTFA 228

>pdb|2CVZ|A Chain A, Structure Of Hydroxyisobutyrate Dehydrogenase From Thermus Thermophilus Hb8 Length = 289

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 2/156 (1%)
Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
           + +   L  G  +VD TS  P  +R + +  RE+    +DAPVSGG  GA  G L +   
Sbjct: 74  EALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVXLG 133
Query: 65  GDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
           G    V+ + P      K   +G  G G + K  N  ++  NL    EGL+   + G+  
Sbjct: 134 GPEEAVERVRPFLAYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSA 193
Query: 125 RKWRDAVKGGAAGSMAME-LYGERMIEKDFRPGGFA 159
            K  + +   +  S A E L  +R++ + F P  FA
Sbjct: 194 EKALEVINASSGRSNATENLIPQRVLTRAF-PKTFA 228

>pdb|3PEF|A Chain A, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase From Geobacter Metallireducens In Complex With Nadp+ Length = 287

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 6   GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
           G++  +  G  YVD ++  PA ++ I      +    ++APVSG    A DG L I AAG
Sbjct: 80  GVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAG 139
Query: 66  DSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
           D  +     P FE +GK    +G  G G   K+   +V+G  +    EGL   ++AGL  
Sbjct: 140 DRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLAT 199
Query: 125 RKWRDAVKGGAAGSMAMELYGERMIEKDFRP 155
               D +  GA  +    L G  + +++F P
Sbjct: 200 DAILDVIGAGAMANPMFALKGGLIRDRNFAP 230

>pdb|2GF2|A Chain A, Crystal Structure Of Human Hydroxyisobutyrate Dehydrogenase Length = 296

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
           +GI+  +  G++ +D+++  PA+++E+ K   +     +DAPVSGG   AR G L     
Sbjct: 78  NGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVG 137
Query: 65  GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
           G          L   +G    + G  G GQ+ KI N +++  +++G +E +      GLD
Sbjct: 138 GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLD 197
Query: 124 VR 125
            +
Sbjct: 198 PK 199

>pdb|2I9P|A Chain A, Crystal Structure Of Human Hydroxyisobutyrate Dehydrogenase Complexed With Nad+ Length = 319

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
           +GI+  +  G++ +D+++  PA+++E+ K   +     +DAPVSGG   AR G L     
Sbjct: 100 NGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVG 159
Query: 65  GDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
           G          L   +G    + G  G GQ+ KI N +++  +++G +E +      GLD
Sbjct: 160 GVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLD 219
Query: 124 VR 125
            +
Sbjct: 220 PK 221

>pdb|3PDU|A Chain A, Crystal Structure Of Gamma-Hydroxybutyrate Dehydrogenase From Geobacter Sulfurreducens In Complex With Nadp+ Length = 287

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 1/150 (0%)
Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
           +G++  +  G  Y+D ++     +  I      R    ++APVSG    A DG L I AA
Sbjct: 79  NGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAA 138
Query: 65  GDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
           GD ++     P F  LGK    +G  G G   K+   +++G  +  L EG+      GLD
Sbjct: 139 GDQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLD 198
Query: 124 VRKWRDAVKGGAAGSMAMELYGERMIEKDF 153
             +  + +  GA  +   +  G+ ++  +F
Sbjct: 199 GGQLLEVLDAGAMANPMFKGKGQMLLSGEF 228

>pdb|3G0O|A Chain A, Crystal Structure Of 3-Hydroxyisobutyrate Dehydrogenase (Ygbj) From Salmonella Typhimurium Length = 303

Iteration: 1
 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
           DG+     PG+    +++   A A+EI       +   +DAPVSGG + A  G+  + A+
Sbjct: 86  DGVAHLXKPGSAVXVSSTISSADAQEIAAALTALNLNXLDAPVSGGAVKAAQGEXTVXAS 145
Query: 65  GDSAVVQWLTPLFEVLGKPTFM--GGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGL 122
           G  A    L P+ + +    +      G G + KI +Q++ G ++   +E    A  AG+
Sbjct: 146 GSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAXALAARAGI 205
Query: 123 DVRKWRDAVKGGAAGSMAMELYGERMIEKDFRP 155
            +    D V   A  S   E   + +++ D+ P
Sbjct: 206 PLDVXYDVVTHAAGNSWXFENRXQHVVDGDYTP 238

>pdb|3QHA|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Mycobacterium Avium 104 Length = 296

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 63/154 (40%), Gaps = 13/154 (8%)
Query: 12  NPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQ 71
            PG V    ++     A E+ +  + RD   VDAPVSGG   A  G+LA     D  V +
Sbjct: 96  KPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGADREVYE 155
Query: 72  WLTPLFEVLGKPTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVR----- 125
            + P F+         G  G G   K+A  ++   +     E +  A+ AGLD++     
Sbjct: 156 RIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRV 215
Query: 126 -KWRDAVKGGAAGSMAMELYGERMIEKDFRPGGF 158
            +  DA+ GG    M       R   KD  P  F
Sbjct: 216 VRHTDALTGGPGAIMV------RDNMKDLEPDNF 243
  Database: pdbaa

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	220
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	7e-85
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	3e-79
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	2e-77
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	4e-76
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	5e-75
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	6e-75
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	2e-73
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	2e-63
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	1e-62
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	1e-60
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	1e-59
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	1e-55
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	7e-50
3qha_A	296	Putative oxidoreductase; seattle structural genomi	9e-50
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	6e-22
4ezb_A	317	Uncharacterized conserved protein; structural geno	3e-20
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	5e-11

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} Length = 320

 Score =  253 bits (649), Expect = 7e-85
 Identities = 72/215 (33%), Positives = 112/215 (52%), Gaps = 4/215 (1%)

Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
            G+ +A+ PG++++D  S  P  AR+            +D PVSGG +GA  G L I A 
Sbjct: 108 QGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIMAG 167

Query: 65  GDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDV 124
           G  A  +   PL +V G+ T +G  G GQ  K+ANQ++VG  +  ++E L+FA + G D+
Sbjct: 168 GKPADFERSLPLLKVFGRATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADM 227

Query: 125 RKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVL 184
            K ++A+ GG A S  ++L+G+RM+E+DF P       +KDM   +   +E         
Sbjct: 228 AKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSIQLKDMRNALATAQEIG----FDA 283

Query: 185 PGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
           P   L +QL++  V +G       GL   +   NG
Sbjct: 284 PITGLFEQLYAEGVEHGLTDLDQSGLFVELASRNG 318

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} Length = 295

 Score =  238 bits (610), Expect = 3e-79
 Identities = 79/219 (36%), Positives = 117/219 (53%), Gaps = 5/219 (2%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
               G       G   VD +S  P   +   +   E     +DAPVSGG+IGAR+G L+I
Sbjct: 77  FGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLDAPVSGGEIGAREGTLSI 136

Query: 62  FAAGDSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
              G+  V   + PLF++LGK  T +GG G GQ+CK+ANQI+V  N+  +SE LVFA +A
Sbjct: 137 MVGGEQKVFDRVKPLFDILGKNITLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKA 196

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
           G D  + R A+ GG A S  +E++GERMI + F PG       KD+ +    ++ ++   
Sbjct: 197 GADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALHQKDLNL---ALQSAKALA 253

Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
            + LP  A  ++LF+   ANG  +     +V  +E +  
Sbjct: 254 -LNLPNTATCQELFNTCAANGGSQLDHSAMVQALELMAN 291

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 Length = 299

 Score =  233 bits (597), Expect = 2e-77
 Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 5/219 (2%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L  +GI+    PG V +D +S  P  +REI    + +    +DAPVSGG+  A DG L++
Sbjct: 80  LGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSV 139

Query: 62  FAAGDSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
              GD A+      L + +       G  G G   K+ANQ++V  N+  +SE L  A +A
Sbjct: 140 MVGGDKAIFDKYYDLMKAMAGSVVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKA 199

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
           G++      A++GG AGS  ++     +++++F+PG   +  +KD+   +D         
Sbjct: 200 GVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVG--- 256

Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
              LP  A   ++  A+ A+G G      L    E++  
Sbjct: 257 -AQLPLTAAVMEMMQALRADGHGNDDHSALACYYEKLAK 294

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} Length = 310

 Score =  230 bits (590), Expect = 4e-76
 Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 5/218 (2%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
            D  G++  +  G  Y+D ++     + +I +    +    V+ PVSG    A DG+L I
Sbjct: 96  FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLII 155

Query: 62  FAAGDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
            AAGD A+ +   P F+VLGK   ++G  G G   K+   +++G+ +   SEGLV AD++
Sbjct: 156 LAAGDKALFEESIPAFDVLGKRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKS 215

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
           GL      D +  GA  +   +  G  M +  + P    ++  KDM + + + +E+    
Sbjct: 216 GLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLKHQQKDMRLALALGDENA--- 272

Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN 218
            V +P AA   + F    + G G      ++  ++   
Sbjct: 273 -VSMPVAAAANEAFKKARSLGLGDLDFSAVIEAVKFSR 309

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} Length = 287

 Score =  227 bits (581), Expect = 5e-75
 Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 5/216 (2%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
               G++  +  G  YVD ++  PA ++ I      +    ++APVSG    A DG L I
Sbjct: 76  FGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLII 135

Query: 62  FAAGDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
            AAGD  +     P FE +GK    +G  G G   K+   +V+G  +    EGL   ++A
Sbjct: 136 LAAGDRNLYDEAMPGFEKMGKKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKA 195

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
           GL      D +  GA  +    L G  + +++F P    ++M KD+ + V + +      
Sbjct: 196 GLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLRLAVALGDRVG--- 252

Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIER 216
              L  +A   +LF    A G G      +    ER
Sbjct: 253 -QPLVASAAANELFKGARAAGFGDEDFSAIFKTYER 287

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} Length = 316

 Score =  227 bits (582), Expect = 6e-75
 Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 5/215 (2%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L P G++  + PG  YVD ++       E+ +V   R    ++APVSG    + DG L I
Sbjct: 105 LGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVI 164

Query: 62  FAAGDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
            AAGD  + +  +  F+ +GK   F+G  G      +   +V G+ +  ++EGL  A   
Sbjct: 165 LAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVT 224

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
           G   +   D +  G   S+ ++   + +++ +F+P  + +Y+ KD+ + + + +      
Sbjct: 225 GQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQKDLRLAIALGDAVN--- 281

Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215
               P AA   +++    A          +     
Sbjct: 282 -HPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYI 315

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} Length = 287

 Score =  223 bits (571), Expect = 2e-73
 Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 5/215 (2%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
              +G++  +  G  Y+D ++     +  I      R    ++APVSG    A DG L I
Sbjct: 76  FGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLII 135

Query: 62  FAAGDSAVVQWLTPLFEVLGKP-TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
            AAGD ++     P F  LGK    +G  G G   K+   +++G  +  L EG+      
Sbjct: 136 LAAGDQSLFTDAGPAFAALGKKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNC 195

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDER 180
           GLD  +  + +  GA  +   +  G+ ++  +F      ++M KD+ + V++ +      
Sbjct: 196 GLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLKHMQKDLRLAVELGDRLG--- 252

Query: 181 VVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215
              L GAA   + F    A G        +  V+E
Sbjct: 253 -QPLHGAATANESFKRARAAGHADEDFAAVFRVLE 286

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} Length = 301

 Score =  196 bits (500), Expect = 1e-62
 Identities = 72/220 (32%), Positives = 110/220 (50%), Gaps = 6/220 (2%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
             P G++SA   G V VD +S  P+   ++ KVA E+    VDAPVSGG  GA  G L I
Sbjct: 79  NGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTI 138

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
                 AV + + P+  V+GK  + +G  G G + KI N +++G N+  L+E LV   + 
Sbjct: 139 MVGASEAVFEKIQPVLSVIGKDIYHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKC 198

Query: 121 GLDVRKWRDAVKGGAAGSMAMELYGERMI-EKDFRPGGFAEYMVKDMGMGVDVVEESEDE 179
           GL     ++ +   +  S AME   E+ I   DF  G   +   KD+G+ ++  +E    
Sbjct: 199 GLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQHKDLGLALEAGKEGN-- 256

Query: 180 RVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
             V LP  A+  Q+F    A G G+     ++ V E++ G
Sbjct: 257 --VPLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQMTG 294

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} Length = 303

 Score =  190 bits (486), Expect = 1e-60
 Identities = 52/220 (23%), Positives = 100/220 (45%), Gaps = 6/220 (2%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
              DG+   + PG+  + +++   A A+EI       +   +DAPVSGG + A  G++ +
Sbjct: 83  FGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGEMTV 142

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTF-MGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADE 119
            A+G  A    L P+ + +    + +    G G + KI +Q++ G ++   +E +  A  
Sbjct: 143 MASGSEAAFTRLKPVLDAVASNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAAR 202

Query: 120 AGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDE 179
           AG+ +    D V   A  S   E   + +++ D+ P    +  VKD+G+   V + ++  
Sbjct: 203 AGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAVDIFVKDLGL---VADTAKAL 259

Query: 180 RVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
           R   LP A+    +F++    G GK     ++ +      
Sbjct: 260 R-FPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGEGH 298

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* Length = 289

 Score =  188 bits (480), Expect = 1e-59
 Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 5/217 (2%)

Query: 4   PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA 63
            + +   L  G  +VD TS  P  +R + +  RE+    +DAPVSGG  GA  G L +  
Sbjct: 73  AEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVML 132

Query: 64  AGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
            G    V+ + P      K   +G  G G + K  N  ++  NL    EGL+   + G+ 
Sbjct: 133 GGPEEAVERVRPFLAYAKKVVHVGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVS 192

Query: 124 VRKWRDAVKGGAAGSMAMELY-GERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVV 182
             K  + +   +  S A E    +R++ + F        +VKD+G+ + V++  +     
Sbjct: 193 AEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVKDLGIAMGVLDGEK----A 248

Query: 183 VLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING 219
             P   L ++++                + ++ER  G
Sbjct: 249 PSPLLRLAREVYEMAKRELGPDADHVEALRLLERWGG 285

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* Length = 296

 Score =  178 bits (453), Expect = 1e-55
 Identities = 47/222 (21%), Positives = 90/222 (40%), Gaps = 12/222 (5%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
              +GI+  +  G++ +D+++  PA+++E+ K   +     +DAPVSGG   AR G L  
Sbjct: 75  SGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTF 134

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA 120
              G          L   +G      G  G GQ+ KI N +++  +++G +E +      
Sbjct: 135 MVGGVEDEFAAAQELLGCMGSNVVYCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRL 194

Query: 121 GLDVRKWRDAVKGGAAGSMAMELY-------GERMIEKDFRPGGFAEYMVKDMGMGVDVV 173
           GLD +     +   +    + + Y              +++ G     M KD+G+  D  
Sbjct: 195 GLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGFGTTLMAKDLGLAQDSA 254

Query: 174 EESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE 215
             ++      +   +L  Q++  M A G  K     +   + 
Sbjct: 255 TSTK----SPILLGSLAHQIYRMMCAKGYSKKDFSSVFQFLR 292

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} Length = 306

 Score =  163 bits (415), Expect = 7e-50
 Identities = 33/218 (15%), Positives = 57/218 (26%), Gaps = 8/218 (3%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           L   G+  AL      VD T++       +  +  +     V   +          +   
Sbjct: 83  LGMPGVARAL-AHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHS 141

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
              GD    +    L E L   T         +          A ++   E +   D  G
Sbjct: 142 IHTGDREAFEQHRALLEGLAGHTVFLPWDEALAFATVLHAHAFAAMVTFFEAVGAGDRFG 201

Query: 122 LDVRKWRDAVK--GGAAGSMAMELYGERMIEKDFRPGGF-AEYMVKDMGMGVDVVEESED 178
           L V K    +        + A+E    R+  +DF+      +           + +    
Sbjct: 202 LPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGDQARLDVHADAFAH---IAQSLHA 258

Query: 179 ERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIER 216
           +  V  P      Q+     A G G            R
Sbjct: 259 QG-VWTPVFDAVCQVVQRAAAMGYGDQDIAATTKSFAR 295

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} Length = 296

 Score =  162 bits (413), Expect = 9e-50
 Identities = 47/209 (22%), Positives = 77/209 (36%), Gaps = 13/209 (6%)

Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
             +     PG V    ++     A E+ +  + RD   VDAPVSGG   A  G+LA    
Sbjct: 89  GELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVG 148

Query: 65  GDSAVVQWLTPLFEVLGKPTF-MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD 123
            D  V + + P F+         G  G G   K+A  ++   +     E +  A+ AGLD
Sbjct: 149 ADREVYERIKPAFKHWAAVVIHAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLD 208

Query: 124 VRKWRDAVKGGAAGSMAMELYGERMI-------EKDFRPGGFA-EYMVKDMGMGVDVVEE 175
           ++     V+   A +        R            ++P         KD+ + + + E 
Sbjct: 209 LQALGRVVRHTDALTGGPGAIMVRDNMKDLEPDNFLYQPFLHTRGLGEKDLSLALALGEA 268

Query: 176 SEDERVVVLPGAALGKQLFSAMVANGDGK 204
                 V LP A L  +  +A +     +
Sbjct: 269 VS----VDLPLARLAYEGLAAGLGVPHKE 293

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} Length = 312

 Score = 90.3 bits (224), Expect = 6e-22
 Identities = 31/155 (20%), Positives = 52/155 (33%), Gaps = 7/155 (4%)

Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSG-GDIGARDGKLAIFA 63
                 L  GA+Y D TS  PA+ R I  V       A  A V+    +     ++ +  
Sbjct: 101 QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPHGHRVPLVV 160

Query: 64  AGDSAVVQWLTPLFEVLGKPT--FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAG 121
            GD A  +     F + G       G  G     K+    V+        E L  A++ G
Sbjct: 161 DGDGA--RRFQAAFTLYGCRIEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMG 218

Query: 122 LDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPG 156
           L   +   ++          +L    ++E++    
Sbjct: 219 LA-DRVLASLDASFPEHHLRDL-ALYLVERNLEHA 251

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} Length = 317

 Score = 86.1 bits (213), Expect = 3e-20
 Identities = 30/202 (14%), Positives = 52/202 (25%), Gaps = 10/202 (4%)

Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
                 L+  AV++D  S  P                 V+  V        +    + A 
Sbjct: 105 ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMARVPPYAEKVPILVAG 164

Query: 65  GDSAVVQWLTPLFEVLGKPTFM--GGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGL 122
             +  V         LG          G   S K+   +++      L E L  A+ AG+
Sbjct: 165 RRAVEVA---ERLNALGMNLEAVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGV 221

Query: 123 DVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVV 182
             R      +             +  + + F  G      V +M    + +E       +
Sbjct: 222 TERILDSVQETFPGLD--WRDVADYYLSRTFEHGAR---RVTEMTEAAETIESFGLNAPM 276

Query: 183 VLPGAALGKQLFSAMVANGDGK 204
                       +AM   G   
Sbjct: 277 SRAACETIAAAHAAMKDQGLSV 298

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6 Length = 264

 Score = 59.6 bits (144), Expect = 5e-11
 Identities = 23/149 (15%), Positives = 39/149 (26%), Gaps = 11/149 (7%)

Query: 10  ALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAV 69
             +   +YVD  +  P   R    +  +     VDA + G           I +  D+  
Sbjct: 77  GRHVRGIYVDINNISPETVRMASSLIEKGGF--VDAAIMGSVRRKGADIRIIASGRDAEE 134

Query: 70  VQWLTPLFEVLGKPTFMGG--AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKW 127
              L       G    + G   G   + K+            L E L  A   GL+    
Sbjct: 135 FMKLNRY----GLNIEVRGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLE-EDV 189

Query: 128 RDAVKGGAAGSMAMELYG--ERMIEKDFR 154
            + ++               +       R
Sbjct: 190 LEMLEYTEGNDFRESAISRLKSSCIHARR 218

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	220
3obb_A	300	Probable 3-hydroxyisobutyrate dehydrogenase; struc	100.0
4gbj_A	297	6-phosphogluconate dehydrogenase NAD-binding; stru	100.0
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	100.0
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	100.0
3pdu_A	287	3-hydroxyisobutyrate dehydrogenase family protein;	100.0
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	100.0
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	100.0
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	100.0
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	100.0
3qha_A	296	Putative oxidoreductase; seattle structural genomi	100.0
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	100.0
4ezb_A	317	Uncharacterized conserved protein; structural geno	100.0
3cky_A	301	2-hydroxymethyl glutarate dehydrogenase; rossmann	100.0
1yb4_A	295	Tartronic semialdehyde reductase; structural genom	100.0
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	100.0
2gf2_A	296	Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct	100.0
2cvz_A	289	Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase;	100.0
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	100.0
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	99.97
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	99.97
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	99.94
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	99.92
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	99.91
1i36_A	264	Conserved hypothetical protein MTH1747; NADP bindi	99.91
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	99.91
3g79_A	478	NDP-N-acetyl-D-galactosaminuronic acid dehydrogen;	99.9
4a7p_A	446	UDP-glucose dehydrogenase; oxidoreductase, carbohy	99.9
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	99.89
3gg2_A	450	Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd	99.88
3ojo_A	431	CAP5O; rossmann fold, complex with cofactor NAD an	99.86
2q3e_A	467	UDP-glucose 6-dehydrogenase; hexamer, structural g	99.83
3pid_A	432	UDP-glucose 6-dehydrogenase; rossmann fold, oxidor	99.83
2o3j_A	481	UDP-glucose 6-dehydrogenase; structural genomics,	99.82
2y0c_A	478	BCEC, UDP-glucose dehydrogenase; oxidoreductase, c	99.79
1mv8_A	436	GMD, GDP-mannose 6-dehydrogenase; rossman fold, do	99.74
1dlj_A	402	UDP-glucose dehydrogenase; rossmann fold, ternary	99.72
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	99.52
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	99.49
2ew2_A	316	2-dehydropantoate 2-reductase, putative; alpha-str	99.48
1ks9_A	291	KPA reductase;, 2-dehydropantoate 2-reductase; PAN	99.45
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	99.45
3vtf_A	444	UDP-glucose 6-dehydrogenase; two discrete alpha/be	99.31
1z82_A	335	Glycerol-3-phosphate dehydrogenase; TM0378, struct	99.31
1txg_A	335	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid	99.29
1evy_A	366	Glycerol-3-phosphate dehydrogenase; rossmann fold,	99.29
2qyt_A	317	2-dehydropantoate 2-reductase; APC81190, porphyrom	99.26
1zej_A	293	HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural	99.24
2izz_A	322	Pyrroline-5-carboxylate reductase 1; amino-acid bi	99.19
3k96_A	356	Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA	99.18
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	99.14
2rcy_A	262	Pyrroline carboxylate reductase; malaria, structur	99.13
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	99.1
1x0v_A	354	GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase	99.07
1yj8_A	375	Glycerol-3-phosphate dehydrogenase; SGPP, structur	99.01
1bg6_A	359	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L	98.93
2dpo_A	319	L-gulonate 3-dehydrogenase; structural genomics, N	98.8
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	98.79
3mog_A	483	Probable 3-hydroxybutyryl-COA dehydrogenase; struc	98.77
2i76_A	276	Hypothetical protein; NADP, dehydrogenase, TM1727,	98.69
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	98.53
2yjz_A	201	Metalloreductase steap4; oxidoreductase, metabolic	97.89
3k6j_A	460	Protein F01G10.3, confirmed by transcript evidenc;	98.49
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	98.48
3gt0_A	247	Pyrroline-5-carboxylate reductase; structural geno	98.46
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	98.35
1f0y_A	302	HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive	98.34
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	98.32
1wdk_A	715	Fatty oxidation complex alpha subunit; alpha2BETA2	98.3
2wtb_A	725	MFP2, fatty acid multifunctional protein (ATMFP2);	98.27
3b1f_A	290	Putative prephenate dehydrogenase; enzyme, 4-hydro	98.17
1zcj_A	463	Peroxisomal bifunctional enzyme; peroxisomal multi	98.16
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	98.16
2dc1_A	236	L-aspartate dehydrogenase; NAD, oxidoreductase; HE	98.15
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	98.15
2p4q_A	497	6-phosphogluconate dehydrogenase, decarboxylating;	98.13
2zyd_A	480	6-phosphogluconate dehydrogenase, decarboxylating;	98.07
2iz1_A	474	6-phosphogluconate dehydrogenase, decarboxylating;	98.06
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	97.99
2pgd_A	482	6-phosphogluconate dehydrogenase; oxidoreductase (	97.83
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	97.72
3ktd_A	341	Prephenate dehydrogenase; structural genomics, joi	97.67
2i99_A	312	MU-crystallin homolog; thyroid hormine binding pro	97.6
3dfu_A	232	Uncharacterized protein from 6-phosphogluconate de	97.37
4gwg_A	484	6-phosphogluconate dehydrogenase, decarboxylating;	96.92
4huj_A	220	Uncharacterized protein; PSI-biology, nysgrc, stru	96.77
3hn2_A	312	2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, str	96.17
3hwr_A	318	2-dehydropantoate 2-reductase; YP_299159.1, PANE/A	96.11
3i83_A	320	2-dehydropantoate 2-reductase; structural genomics	96.06
3ghy_A	335	Ketopantoate reductase protein; oxidoreductase, NA	95.49
1np3_A	338	Ketol-acid reductoisomerase; A DEEP figure-OF-eigh	92.27
3g17_A	294	Similar to 2-dehydropantoate 2-reductase; structur	91.04
1pgj_A	478	6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; o	88.58
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	86.25
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	84.12

>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*

Probab=100.00  E-value=1.4e-54  Score=373.51  Aligned_cols=214  Identities=28%  Similarity=0.526  Sum_probs=206.3

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      +|++|+++++++|++||||||++|+++++++++++++|++||||||+|||.+|++|+|++|+||++++|++++|+|++||
T Consensus        78 ~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaPVsGg~~~A~~G~L~imvGG~~~~~~~~~p~l~~~g  157 (300)
T 3obb_A           78 LDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMG  157 (300)
T ss_dssp             HSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHE
T ss_pred             hchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEecCCCCCHHHHHhCCEEEEEeCCHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-------hhccccC
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-------RMIEKDF  153 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~  153 (220)
                      + ++|+|++|+|+.+||+||++.++++++++|++.++++.|+|+++++++++.+++.|+.++.+.|       .+..++|
T Consensus       158 ~~i~~~G~~G~g~~~Kl~~N~l~~~~~~a~aEa~~la~~~Gld~~~~~~vl~~~~~~s~~~~~~~p~~~~~~~~~~~~~~  237 (300)
T 3obb_A          158 RNIFHAGPDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDY  237 (300)
T ss_dssp             EEEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTTSTTSGGGGTT
T ss_pred             CCEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhCcccchHHHhhccccchhhhccccccC
Confidence            9 9999999999999999999999999999999999999999999999999999999999998876       4567889


Q ss_pred             CCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696          154 RPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING  219 (220)
Q Consensus       154 ~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~  219 (220)
                      +++|+++++.||++++++++++.    |+|+|+.+.++++|+++.++|+|++|+++|+++|++.+|
T Consensus       238 ~~~f~~~l~~KDl~l~~~~A~~~----g~~~p~~~~a~~~~~~a~~~G~g~~D~sal~~~~e~~~G  299 (300)
T 3obb_A          238 SGGFMAQLMAKDLGLAQEAAQAS----ASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDPTQG  299 (300)
T ss_dssp             CSSSBHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCTTC-
T ss_pred             CccchHHHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhCCCCCcCHHHHHHHHHHhcC
Confidence            99999999999999999999999    999999999999999999999999999999999999877

>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}

Probab=100.00  E-value=6.2e-51  Score=350.25  Aligned_cols=211  Identities=17%  Similarity=0.239  Sum_probs=205.9

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT   84 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~   84 (220)
                      .+++.+.+|++|||+||++|++++++++++.++|++|+||||+|++..+++|++++|+||++++|++++|+|+++++ ++
T Consensus        82 ~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsGg~~~a~~g~l~im~gG~~~~~~~~~~~l~~~g~~i~  161 (297)
T 4gbj_A           82 ELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFARPEAVRAKVGNICLSGNAGAKERIKPIVENFVKGVF  161 (297)
T ss_dssp             HHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCSEEE
T ss_pred             HHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCCCccccccccceeecccchhHHHHHHHHHHHhhCCeE
Confidence            36778899999999999999999999999999999999999999999999999999999999999999999999999 99


Q ss_pred             ecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCC-CchhhHH
Q 044696           85 FMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRP-GGFAEYM  162 (220)
Q Consensus        85 ~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~-~f~~~~~  162 (220)
                      |+|+ +|+|+.+||+||++.++++++++|++.+++++|||+++++++++.+++.||+++.+.|++.+++|.| +|+++++
T Consensus       162 ~~g~~~G~g~~~Kl~~N~~~~~~~~~~aEa~~la~~~Gld~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~p~~f~~~l~  241 (297)
T 4gbj_A          162 DFGDDPGAANVIKLAGNFMIACSLEMMGEAFTMAEKNGISRQSIYEMLTSTLFAAPIFQNYGKLVASNTYEPVAFRFPLG  241 (297)
T ss_dssp             ECCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTTTCSHHHHHHHHHHHHTCCCSCSSBHHHH
T ss_pred             EecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcccCchhhccCccccCCCCCCccchhHHH
Confidence            9995 8999999999999999999999999999999999999999999999999999999999999999987 8999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696          163 VKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK  220 (220)
Q Consensus       163 ~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~  220 (220)
                      .||++++++++++.    |+|+|+++.++++|+++.++|+|++||+++++.+++.+|+
T Consensus       242 ~KDl~l~~~~A~~~----g~~~p~~~~~~~~~~~a~~~G~g~~D~sal~~~~~~~aGl  295 (297)
T 4gbj_A          242 LKDINLTLQTASDV----NAPMPFADIIRNRFISGLAKGRENLDWGALALGASDDAGL  295 (297)
T ss_dssp             HHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHh----CCCChHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHcCC
Confidence            99999999999999    9999999999999999999999999999999999999985

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=100.00  E-value=7.3e-42  Score=296.28  Aligned_cols=211  Identities=34%  Similarity=0.536  Sum_probs=203.9

Q ss_pred             CccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc
Q 044696            3 DPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK   82 (220)
Q Consensus         3 g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~   82 (220)
                      |+ ++++.+.+|++|||+||++|.+++++++.+.++|++|+|+||+|++..++.|++.+++||+++++++++|+|+.+ .
T Consensus       107 ~~-~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~-~  184 (320)
T 4dll_A          107 AQ-GVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHLDTPVSGGTVGAEQGTLVIMAGGKPADFERSLPLLKVF-G  184 (320)
T ss_dssp             TT-CHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECHHHHHHHTCEEEEEESCHHHHHHHHHHHHHH-E
T ss_pred             ch-hHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHhHHhcCCeeEEeCCCHHHHHHHHHHHHhc-C
Confidence            44 788889999999999999999999999999999999999999999999999999999999999999999999999 8


Q ss_pred             -ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhH
Q 044696           83 -PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEY  161 (220)
Q Consensus        83 -~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~  161 (220)
                       ++|+|++|.|+.+|+++|++...++.+++|++.++++.|+|+++++++++.+.+.||.++.+.|++.+++|.++|++++
T Consensus       185 ~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~gf~~~~  264 (320)
T 4dll_A          185 RATHVGPHGSGQLTKLANQMIVGITIGAVAEALLFATKGGADMAKVKEAITGGFADSRVLQLHGQRMVERDFAPRARLSI  264 (320)
T ss_dssp             EEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHTTSTTCBHHHHTHHHHHHTTCCCCSSBHHH
T ss_pred             CEEEeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcccccCHHHHHhhhhhccCCCCCcccHHH
Confidence             9999999999999999999999999999999999999999999999999999899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696          162 MVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING  219 (220)
Q Consensus       162 ~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~  219 (220)
                      +.||++++++++++.    |+++|+.+.+.++|+++.+.|+|++|++++++++++.+|
T Consensus       265 ~~KDl~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~~  318 (320)
T 4dll_A          265 QLKDMRNALATAQEI----GFDAPITGLFEQLYAEGVEHGLTDLDQSGLFVELASRNG  318 (320)
T ss_dssp             HHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHTTTTTTSBGGGHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCCcCHHHHHHHHHHhcC
Confidence            999999999999999    999999999999999999999999999999999998776

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=100.00  E-value=1.2e-41  Score=293.64  Aligned_cols=212  Identities=27%  Similarity=0.434  Sum_probs=206.4

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      ||++++++.+++|++|||+||++|.+++++++.+.++|++|+|+||+|++..+..|++++++||+++++++++|+|+.++
T Consensus        96 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~pv~g~~~~a~~g~l~i~~gg~~~~~~~~~~ll~~~g  175 (310)
T 3doj_A           96 FDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGRFVEGPVSGSKKPAEDGQLIILAAGDKALFEESIPAFDVLG  175 (310)
T ss_dssp             HSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHE
T ss_pred             hCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEeCCCCCChhHHhcCCeEEEEcCCHHHHHHHHHHHHHhC
Confidence            57788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhh
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAE  160 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~  160 (220)
                      . ++++|++|.|+.+|+++|++...++.+++|++.++++.|+|++++.++++.+...|++++.+.|++.+++|.++|+++
T Consensus       176 ~~~~~~g~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~f~~~  255 (310)
T 3doj_A          176 KRSFYLGQVGNGAKMKLIVNMIMGSMMNAFSEGLVLADKSGLSSDTLLDILDLGAMTNPMFKGKGPSMNKSSYPPAFPLK  255 (310)
T ss_dssp             EEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHH
T ss_pred             CCEEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCccHH
Confidence            9 999999999999999999999999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHh
Q 044696          161 YMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI  217 (220)
Q Consensus       161 ~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~  217 (220)
                      ++.||++++++++++.    |+++|+.+.+.++|+++.++|+|++|++++++++++.
T Consensus       256 ~~~KDl~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~  308 (310)
T 3doj_A          256 HQQKDMRLALALGDEN----AVSMPVAAAANEAFKKARSLGLGDLDFSAVIEAVKFS  308 (310)
T ss_dssp             HHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHCC
T ss_pred             HHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHhc
Confidence            9999999999999999    9999999999999999999999999999999999864

>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}

Probab=100.00  E-value=5.5e-41  Score=286.12  Aligned_cols=210  Identities=25%  Similarity=0.395  Sum_probs=204.2

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      ||++++.+.+++|++|||+||++|.+++++++.+.++|++|+|+||+|++..++.|++++++||+++++++++++|+.++
T Consensus        76 ~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g  155 (287)
T 3pdu_A           76 FGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGRFLEAPVSGTKKPAEDGTLIILAAGDQSLFTDAGPAFAALG  155 (287)
T ss_dssp             HSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHE
T ss_pred             cCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEECCccCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhC
Confidence            46778899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhh
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAE  160 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~  160 (220)
                      . ++|+|++|.|+.+|+++|.+...++.+++|++.++++.|+|++++.++++.+...||+++.+.|++.+++|.++|+++
T Consensus       156 ~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T 3pdu_A          156 KKCLHLGEVGQGARMKLVVNMIMGQMMTALGEGMALGRNCGLDGGQLLEVLDAGAMANPMFKGKGQMLLSGEFPTSFPLK  235 (287)
T ss_dssp             EEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHH
T ss_pred             CCEEEcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccChHHHhhccccccCCCCCCCcHH
Confidence            9 999999999999999999999999999999999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHH
Q 044696          161 YMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE  215 (220)
Q Consensus       161 ~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~  215 (220)
                      ++.||++++++++++.    |+++|+.+.+.++|+++.+.|+|++|+++++++++
T Consensus       236 ~~~kd~~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~~~~d~~~~~~~~~  286 (287)
T 3pdu_A          236 HMQKDLRLAVELGDRL----GQPLHGAATANESFKRARAAGHADEDFAAVFRVLE  286 (287)
T ss_dssp             HHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHC
T ss_pred             HHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCcCCHHHHHHHHh
Confidence            9999999999999999    99999999999999999999999999999999875

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=100.00  E-value=8e-41  Score=287.42  Aligned_cols=213  Identities=24%  Similarity=0.422  Sum_probs=202.4

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      ||++++.+.+++|++|||+||+.|.+++++++.+.++|++|+|+||+|++..+..|++.+++||+++++++++++|+.++
T Consensus        83 ~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g  162 (303)
T 3g0o_A           83 FGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLNMLDAPVSGGAVKAAQGEMTVMASGSEAAFTRLKPVLDAVA  162 (303)
T ss_dssp             C--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESCHHHHHTTCEEEEEECCHHHHHHHHHHHHHHE
T ss_pred             hChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCeEEeCCCCCChhhhhcCCeEEEeCCCHHHHHHHHHHHHHHC
Confidence            57788999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchh
Q 044696           82 K-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFA  159 (220)
Q Consensus        82 ~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~  159 (220)
                      . ++++|+ +|.|+.+|+++|++...++.+++|++.++++.|+|++++.++++.+.+.||.++++.|++.+++|+++|++
T Consensus       163 ~~~~~~~~~~g~a~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  242 (303)
T 3g0o_A          163 SNVYRISDTPGAGSTVKIIHQLLAGVHIAAAAEAMALAARAGIPLDVMYDVVTHAAGNSWMFENRMQHVVDGDYTPRSAV  242 (303)
T ss_dssp             EEEEEEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBH
T ss_pred             CCEEECCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccCCHHHHhhhHHHhcCCCCCCCch
Confidence            9 999998 99999999999999999999999999999999999999999999988999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhc
Q 044696          160 EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN  218 (220)
Q Consensus       160 ~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~  218 (220)
                      +++.||++++++++++.    |+++|+.+.+.++|+++.+.|+|++|+++++++++++.
T Consensus       243 ~~~~kD~~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~~~~~~~~~~~  297 (303)
T 3g0o_A          243 DIFVKDLGLVADTAKAL----RFPLPLASTALNMFTSASNAGYGKEDDSAVIKIFSGEG  297 (303)
T ss_dssp             HHHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGC----
T ss_pred             HHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHhcc
Confidence            99999999999999999    99999999999999999999999999999999988753

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=100.00  E-value=5.4e-41  Score=286.15  Aligned_cols=210  Identities=28%  Similarity=0.416  Sum_probs=204.0

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      ||++++.+.+++|++|||+||++|.+++++.+.+.++|++|+|+||+|++..+..|++.+++||+++++++++++|+.++
T Consensus        76 ~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g  155 (287)
T 3pef_A           76 FGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGFEKMG  155 (287)
T ss_dssp             HSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEECCHHHHHHTCEEEEEEECHHHHHHHHHHHHHHE
T ss_pred             cCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCEEEECCCcCCHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhC
Confidence            46788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhh
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAE  160 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~  160 (220)
                      . ++++|++|.++.+|+++|++...++.+++|++.++++.|+|++++.+++..+...||+++.+.+++.+++|.++|+++
T Consensus       156 ~~~~~~g~~g~~~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  235 (287)
T 3pef_A          156 KKIIHLGDVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLK  235 (287)
T ss_dssp             EEEEECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHTTCCCCSSBHH
T ss_pred             CCeEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccHHHHHHhhhhhcCCCCCCCchH
Confidence            9 999999999999999999999999999999999999999999999999999989999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHH
Q 044696          161 YMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE  215 (220)
Q Consensus       161 ~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~  215 (220)
                      ++.||++++++++++.    |+++|+.+.+.++|+++.++|+|++|+++++++++
T Consensus       236 ~~~kd~~~~~~~a~~~----g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~  286 (287)
T 3pef_A          236 HMQKDLRLAVALGDRV----GQPLVASAAANELFKGARAAGFGDEDFSAIFKTYE  286 (287)
T ss_dssp             HHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGGC
T ss_pred             HHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHh
Confidence            9999999999999999    99999999999999999999999999999998765

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=100.00  E-value=1e-38  Score=274.96  Aligned_cols=203  Identities=15%  Similarity=0.078  Sum_probs=189.4

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT   84 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~   84 (220)
                      ++ ..+.+|++|||+||++|..++++++.++++|++|+|+||+|+|+.+..+++++++||+++++++++|+|+.++. ++
T Consensus        87 ~l-~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~~vdapv~g~~~~~~~~~~~i~~gg~~~~~~~~~~ll~~lg~~~~  165 (306)
T 3l6d_A           87 GV-ARALAHRTIVDYTTNAQDEGLALQGLVNQAGGHYVKGMIVAYPRNVGHRESHSIHTGDREAFEQHRALLEGLAGHTV  165 (306)
T ss_dssp             TH-HHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCEEEEEEEESCGGGTTCTTCEEEEEECHHHHHHHHHHHHTTCSEEE
T ss_pred             ch-hhccCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEecccccCcccccCCceEEEEcCCHHHHHHHHHHHHHhcCCEE
Confidence            44 44579999999999999999999999999999999999999999999999999999999999999999999988 99


Q ss_pred             ec--CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC--CChHHHHhhhhhhccccCCCC-ch
Q 044696           85 FM--GG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA--AGSMAMELYGERMIEKDFRPG-GF  158 (220)
Q Consensus        85 ~~--G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~--~~s~~~~~~~~~~~~~~~~~~-f~  158 (220)
                      |+  |+ +|+|+.+|    .+.++++++++|++.++++.|+|+++++++++.+.  +.||+++.+.|++.+++|+|+ |+
T Consensus       166 ~~~~g~~~g~g~~~k----~~~~~~~~~~~Ea~~la~~~Gld~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~  241 (306)
T 3l6d_A          166 FLPWDEALAFATVLH----AHAFAAMVTFFEAVGAGDRFGLPVSKTARLLLETSRFFVADALEEAVRRLETQDFKGDQAR  241 (306)
T ss_dssp             ECCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCTTSSB
T ss_pred             EecCCCCccHHHHHH----HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCccc
Confidence            99  97 89999999    45568899999999999999999999999999875  689999999999999999985 79


Q ss_pred             hhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHh
Q 044696          159 AEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI  217 (220)
Q Consensus       159 ~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~  217 (220)
                      ++++.||++++++++++.    |+++|++++++++|+++.+.|+|++|++++++++++.
T Consensus       242 ~~~~~KDl~~~~~~a~~~----g~~~p~~~~~~~~~~~a~~~g~g~~d~~a~~~~~~~~  296 (306)
T 3l6d_A          242 LDVHADAFAHIAQSLHAQ----GVWTPVFDAVCQVVQRAAAMGYGDQDIAATTKSFARE  296 (306)
T ss_dssp             HHHHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTTTTSBGGGGGGGGC--
T ss_pred             HHHHHHHHHHHHHHHHHc----CCCchHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhH
Confidence            999999999999999999    9999999999999999999999999999999988765

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=100.00  E-value=2.6e-36  Score=258.70  Aligned_cols=193  Identities=25%  Similarity=0.325  Sum_probs=182.0

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT   84 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~   84 (220)
                      ++.+.+++|++|||+||+.|.+++++++.+.++|++|+|+||+|++..++.|++.+++||+++++++++|+|+.++. ++
T Consensus        90 ~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g~~~~a~~g~l~~~~gg~~~~~~~~~~ll~~~g~~~~  169 (296)
T 3qha_A           90 ELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSGGAAAAARGELATMVGADREVYERIKPAFKHWAAVVI  169 (296)
T ss_dssp             HHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEESCHHHHHHTCEEEEEECCHHHHHHHHHHHHHHEEEEE
T ss_pred             HHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcCCHHHHhcCCccEEecCCHHHHHHHHHHHHHHcCCeE
Confidence            56778899999999999999999999999999999999999999999999999999999999999999999999999 99


Q ss_pred             ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH------HHHHhccCCChHHHHhhhhhhccccCCCCch
Q 044696           85 FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKW------RDAVKGGAAGSMAMELYGERMIEKDFRPGGF  158 (220)
Q Consensus        85 ~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~------~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~  158 (220)
                      |+|++|.|+.+|+++|.+...++.+++|++.++++.|+|++++      ++++..+.+.|+..+  .+++.++ |.|+|+
T Consensus       170 ~~g~~g~a~~~Kl~~N~~~~~~~~~~~E~~~l~~~~G~d~~~~~~~~~~~~~i~~~~~~s~~~~--~~~~~~~-~~~~f~  246 (296)
T 3qha_A          170 HAGEPGAGTRMKLARNMLTFTSYAAACEAMKLAEAAGLDLQALGRVVRHTDALTGGPGAIMVRD--NMKDLEP-DNFLYQ  246 (296)
T ss_dssp             EEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCCGGGGCCCS--SCSCCCT-TSTTHH
T ss_pred             EcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhhcchHHHHhcCcccCHHhh--chhhhhc-CCCCCc
Confidence            9999999999999999999999999999999999999999999      999998888785544  8888888 889999


Q ss_pred             h-----hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCC
Q 044696          159 A-----EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKF  205 (220)
Q Consensus       159 ~-----~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~  205 (220)
                      +     +++.||++++++++++.    |+|+|+++.++++|+.+.+.||+++
T Consensus       247 ~~~~~~~~~~KD~~~~~~~a~~~----g~~~p~~~~~~~~~~~~~~~g~~~~  294 (296)
T 3qha_A          247 PFLHTRGLGEKDLSLALALGEAV----SVDLPLARLAYEGLAAGLGVPHKEK  294 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHTCCC---
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCcccc
Confidence            9     99999999999999999    9999999999999999999999654

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=100.00  E-value=8.9e-34  Score=242.04  Aligned_cols=213  Identities=29%  Similarity=0.491  Sum_probs=201.7

Q ss_pred             ccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-
Q 044696            4 PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-   82 (220)
Q Consensus         4 ~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-   82 (220)
                      ++++.+.+++|++||++||..|.+.+++.+.+.++|++|+++|++++++.+..+++.+++||+++.+++++++|+.++. 
T Consensus        82 ~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g~~  161 (299)
T 1vpd_A           82 ENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGS  161 (299)
T ss_dssp             TTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTEEE
T ss_pred             cchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEecCCCCHhHHhcCCEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            3567788899999999999999999999999998999999999999999999999999999999999999999999999 


Q ss_pred             ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHH
Q 044696           83 PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYM  162 (220)
Q Consensus        83 ~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~  162 (220)
                      ++++++.|.+..+|+++|.+....+.++.|++.++++.|++++++.+++..+...++.+..+.|.+.+++|.++|+++.+
T Consensus       162 ~~~~~~~~~~~~~Kl~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~  241 (299)
T 1vpd_A          162 VVHTGDIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLH  241 (299)
T ss_dssp             EEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHH
T ss_pred             eEEeCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccCCCCHHHHHhhhHhhcCCCCCCCChHHH
Confidence            99999999999999999999999999999999999999999999999999887778888888899999999889999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696          163 VKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK  220 (220)
Q Consensus       163 ~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~  220 (220)
                      .||++.+++.+++.    |+++|+.+.+.++|+++.+.|+|++||+++++++++.+|.
T Consensus       242 ~kd~~~~~~~a~~~----gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~  295 (299)
T 1vpd_A          242 IKDLANALDTSHGV----GAQLPLTAAVMEMMQALRADGHGNDDHSALACYYEKLAKV  295 (299)
T ss_dssp             HHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHhcCC
Confidence            99999999999999    9999999999999999999999999999999999987663

>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.3e-34  Score=250.61  Aligned_cols=199  Identities=21%  Similarity=0.226  Sum_probs=181.3

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT   84 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~   84 (220)
                      ++.+.+++|++|||+||+.|.+++++++.+.++|++|+|+||+|+ ..+..+++++++||+++  ++++|+|+.++. ++
T Consensus       106 ~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~-~~a~~g~l~i~vgg~~~--~~~~~ll~~~g~~v~  182 (317)
T 4ezb_A          106 SAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMAR-VPPYAEKVPILVAGRRA--VEVAERLNALGMNLE  182 (317)
T ss_dssp             HHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSC-STTTGGGSEEEEESTTH--HHHHHHHHTTTCEEE
T ss_pred             HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCC-chhhcCCEEEEEeCChH--HHHHHHHHHhCCCeE
Confidence            567788999999999999999999999999999999999999995 56778999999999998  999999999999 99


Q ss_pred             ecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC-CChHHHHhhhhhhccccCCCCchhhHH
Q 044696           85 FMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA-AGSMAMELYGERMIEKDFRPGGFAEYM  162 (220)
Q Consensus        85 ~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~f~~~~~  162 (220)
                      |+|+ +|.|+.+|+++|.+..+++++++|++.++++.|+|++ +++.+..+. ..++  ..+.+++.+++|.++|+   +
T Consensus       183 ~~g~~~g~a~~~Kl~~N~~~~~~~~~~~E~~~la~~~Gid~~-~~~~l~~~~~~~~~--~~~~~~~~~~~~~~g~~---~  256 (317)
T 4ezb_A          183 AVGETPGQASSLKMIRSVMIKGVEALLIEALSSAERAGVTER-ILDSVQETFPGLDW--RDVADYYLSRTFEHGAR---R  256 (317)
T ss_dssp             EEESSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHHHSTTSCH--HHHHHHHHHHHHHHHHH---H
T ss_pred             EeCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH-HHHHHHhcCccccH--HHhhhhhhcCCCCCCcc---h
Confidence            9998 9999999999999999999999999999999999995 677777654 3333  56789999999988887   4


Q ss_pred             HHHHHHHHHHHhhcccCCCCCccHHHHHHHH----HHHHHHCCCC-CCChHHHHHHHHHh
Q 044696          163 VKDMGMGVDVVEESEDERVVVLPGAALGKQL----FSAMVANGDG-KFGTQGLVSVIERI  217 (220)
Q Consensus       163 ~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~----~~~a~~~G~g-~~d~~av~~~~~~~  217 (220)
                      .||++++++++++.    |+++|+++.+.++    |+.+.+.|++ ++||+++++.+++.
T Consensus       257 ~KDl~~~~~~a~~~----g~~~pl~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~  312 (317)
T 4ezb_A          257 VTEMTEAAETIESF----GLNAPMSRAACETIAAAHAAMKDQGLSVNDGYRGFVPVLARR  312 (317)
T ss_dssp             HHHHHHHHHHHHTT----TCCCHHHHHHHHHHHHHHHHHTTSSCCTTSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHhh
Confidence            99999999999999    9999999999999    8888889997 99999999998765

>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}

Probab=100.00  E-value=8.1e-33  Score=236.31  Aligned_cols=211  Identities=33%  Similarity=0.514  Sum_probs=200.3

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P   83 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~   83 (220)
                      +++.+.+++|++||++||..|...+++.+.+.++|++|+++|+++++..+..|++.+++||+++.+++++++|+.++. +
T Consensus        82 ~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~g~~~~~~~v~~ll~~~g~~~  161 (301)
T 3cky_A           82 GGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAPVSGGTKGAEAGTLTIMVGASEAVFEKIQPVLSVIGKDI  161 (301)
T ss_dssp             TCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEE
T ss_pred             chHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCE
Confidence            467788899999999999999999999999998999999999999999999999999999999999999999999999 9


Q ss_pred             eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-hhccccCCCCchhhHH
Q 044696           84 TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-RMIEKDFRPGGFAEYM  162 (220)
Q Consensus        84 ~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~f~~~~~  162 (220)
                      +++|+.|.+..+|+++|.+....+..+.|++.++++.|++++++.+++..+...++.+..+.| .+.+++|+++|+++.+
T Consensus       162 ~~~~~~g~~~~~Kl~~N~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~  241 (301)
T 3cky_A          162 YHVGDTGAGDAVKIVNNLLLGCNMASLAEALVLGVKCGLKPETMQEIIGKSSGRSYAMEAKMEKFIMSGDFAGGFAMDLQ  241 (301)
T ss_dssp             EEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHHCCCCCCTCCCSSSSBHHHH
T ss_pred             EEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhhhhhhcCCCCCCccHHHH
Confidence            999999999999999999999999999999999999999999999999988777888888888 8999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696          163 VKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING  219 (220)
Q Consensus       163 ~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~  219 (220)
                      .||++.+++.+++.    |+++|+.+.+.++|+++.+.|+|++||+++++++++.+|
T Consensus       242 ~kd~~~~~~~a~~~----gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~  294 (301)
T 3cky_A          242 HKDLGLALEAGKEG----NVPLPMTAMATQIFEGGRAMGLGREDMSAVIKVWEQMTG  294 (301)
T ss_dssp             HHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHh----CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHHHhcC
Confidence            99999999999999    999999999999999999999999999999999998765

>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}

Probab=100.00  E-value=1e-32  Score=234.91  Aligned_cols=211  Identities=37%  Similarity=0.615  Sum_probs=199.6

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P   83 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~   83 (220)
                      +++.+.+.+|++||++||..|...+++.+.+.++|++|+++|+++++..+..|.+.+++||+++.+++++++|+.++. +
T Consensus        80 ~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~a~~g~~~~~~~~~~~~~~~~~~ll~~~g~~~  159 (295)
T 1yb4_A           80 HGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEMGADYLDAPVSGGEIGAREGTLSIMVGGEQKVFDRVKPLFDILGKNI  159 (295)
T ss_dssp             TSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEEEE
T ss_pred             hhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEccCCCCHHHHHcCCeEEEECCCHHHHHHHHHHHHHhcCCE
Confidence            467778889999999999999999999999998999999999999999999999999999999999999999999999 9


Q ss_pred             eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHHH
Q 044696           84 TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMV  163 (220)
Q Consensus        84 ~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~  163 (220)
                      +++|+.|.+..+|+++|.+...++.++.|++.++++.|++++++.+++..+...++.+..+.+.+.+++|+++|++..+.
T Consensus       160 ~~~~~~~~~~~~Kl~~n~~~~~~~~~~~E~~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~g~~~~~~~  239 (295)
T 1yb4_A          160 TLVGGNGDGQTCKVANQIIVALNIEAVSEALVFASKAGADPVRVRQALMGGFASSRILEVHGERMINRTFEPGFKIALHQ  239 (295)
T ss_dssp             EEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTSSSSCBHHHHHHHHHHHTTCCCCSSBHHHHH
T ss_pred             EEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhHHHhcCCCCCCCchHHHH
Confidence            99999999999999999999999999999999999999999999999998877788888778889999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696          164 KDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING  219 (220)
Q Consensus       164 KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~  219 (220)
                      ||++++++.+++.    |+++|+.+++.+.|+++.+.|+|++||+++++++++.++
T Consensus       240 kd~~~~~~~a~~~----g~~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~  291 (295)
T 1yb4_A          240 KDLNLALQSAKAL----ALNLPNTATCQELFNTCAANGGSQLDHSAMVQALELMAN  291 (295)
T ss_dssp             HHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHHHHHT
T ss_pred             HHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHhcc
Confidence            9999999999999    999999999999999999999999999999999988765

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=100.00  E-value=3e-33  Score=241.45  Aligned_cols=187  Identities=17%  Similarity=0.173  Sum_probs=174.0

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc--CCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARER--DCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-   82 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~--G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-   82 (220)
                      ++.+.+++|++|||+||+.|.+++++++.+.++  |++|+|+||+|++..+ .|++++++||+++  ++++++|+.++. 
T Consensus       102 ~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~~~g~~~vd~pv~g~~~~~-~g~l~i~vgg~~~--~~~~~ll~~~g~~  178 (312)
T 3qsg_A          102 QAGPHLCEGALYADFTSCSPAVKRAIGDVISRHRPSAQYAAVAVMSAVKPH-GHRVPLVVDGDGA--RRFQAAFTLYGCR  178 (312)
T ss_dssp             HHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHHCTTCEEEEEEECSCSTTT-GGGSEEEEESTTH--HHHHHHHHTTTCE
T ss_pred             hhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhhcCCCeEEeccccCCchhh-cCCEEEEecCChH--HHHHHHHHHhCCC
Confidence            567788999999999999999999999999998  9999999999977654 7899999999998  999999999999 


Q ss_pred             ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhH
Q 044696           83 PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEY  161 (220)
Q Consensus        83 ~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~  161 (220)
                      ++|+|+ +|+|+.+|+++|++..+++.+++|++.++++.|+|+ ++++.++.+. .++.++.+.+++.+++|.++|++  
T Consensus       179 ~~~~g~~~g~a~~~Kl~~n~~~~~~~~~~~Ea~~la~~~Gld~-~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~g~~~--  254 (312)
T 3qsg_A          179 IEVLDGEVGGAALLKMCRSAVLKGLEALFLEALAAAEKMGLAD-RVLASLDASF-PEHHLRDLALYLVERNLEHADRR--  254 (312)
T ss_dssp             EEECCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHH-HHHHHHHHHS-GGGTHHHHHHHHHHHHHHHHHHH--
T ss_pred             eEEcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH-HHHHHHHhcC-CchhHHHhhhHhhcCCCCcccch--
Confidence            999998 899999999999999999999999999999999999 6889998765 46777888999999999988876  


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCC
Q 044696          162 MVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGK  204 (220)
Q Consensus       162 ~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~  204 (220)
                       .||++++++++++.    |+++|+++.+.++|+++.+.|+++
T Consensus       255 -~KDl~~~~~~a~~~----g~~~pl~~~~~~~~~~~~~~g~~~  292 (312)
T 3qsg_A          255 -AHELGEVAATLCSV----GVEPLVAEAGYRRLTRVAQVRAAL  292 (312)
T ss_dssp             -HHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             -HHHHHHHHHHHHHc----CCCcHHHHHHHHHHHHHHhcCCcc
Confidence             79999999999999    999999999999999999998876

>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*

Probab=100.00  E-value=7.4e-32  Score=229.83  Aligned_cols=208  Identities=23%  Similarity=0.390  Sum_probs=191.3

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT   84 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~   84 (220)
                      ++++.+++|++||++||++|++.+++.+.+.++|..|+++|+++++..++.+++.+++||+++.+++++++|+.++. ++
T Consensus        79 ~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~~p~~~g~~~a~~~~~~~~~~~~~~~~~~v~~l~~~~g~~~~  158 (296)
T 2gf2_A           79 GILKKVKKGSLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPVSGGVGAARSGNLTFMVGGVEDEFAAAQELLGCMGSNVV  158 (296)
T ss_dssp             SGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESHHHHHHHTCEEEEEESCGGGHHHHHHHHTTTEEEEE
T ss_pred             hHHhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCCCCChhHHhcCcEEEEeCCCHHHHHHHHHHHHHHcCCeE
Confidence            45667789999999999999999999998888899999999999999999999999999999999999999999999 99


Q ss_pred             ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhh--h-----hhccccCCCCc
Q 044696           85 FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYG--E-----RMIEKDFRPGG  157 (220)
Q Consensus        85 ~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~--~-----~~~~~~~~~~f  157 (220)
                      ++|..|.|..+|+++|.+...++..+.|++.++++.|++++++.+++..+.+.++++..+.  |     .+..++|.++|
T Consensus       159 ~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~s~~~~~~~~g~  238 (296)
T 2gf2_A          159 YCGAVGTGQAAKICNNMLLAISMIGTAEAMNLGIRLGLDPKLLAKILNMSSGRCWSSDTYNPVPGVMDGVPSANNYQGGF  238 (296)
T ss_dssp             EEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCBHHHHHSCSSTTTCSSSGGGGTTCSSS
T ss_pred             EeCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCcccCHHHHhcCCcccccccchhccCCCCCC
Confidence            9999999999999999998999999999999999999999999999998777778776543  2     23457888899


Q ss_pred             hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHh
Q 044696          158 FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERI  217 (220)
Q Consensus       158 ~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~  217 (220)
                      +++.+.||++++++.+++.    |+++|+.+.+.++|+++.++|+|++||+++++++++.
T Consensus       239 ~~~~~~kd~~~~~~~a~~~----gv~~p~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~  294 (296)
T 2gf2_A          239 GTTLMAKDLGLAQDSATST----KSPILLGSLAHQIYRMMCAKGYSKKDFSSVFQFLREE  294 (296)
T ss_dssp             BHHHHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHTTTCTTSBGGGHHHHHSCC
T ss_pred             chHHHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHhc
Confidence            9999999999999999999    9999999999999999999999999999999988754

>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*

Probab=100.00  E-value=3.7e-32  Score=230.63  Aligned_cols=208  Identities=25%  Similarity=0.399  Sum_probs=196.4

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-cee
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTF   85 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~   85 (220)
                      +.+.+++|++||++||..|...+++.+.+.++|++|+++|+++++..++.|++.+++||+++.+++++++| .++. +++
T Consensus        76 l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~g~~~~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ll-~~g~~~~~  154 (289)
T 2cvz_A           76 LYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFL-AYAKKVVH  154 (289)
T ss_dssp             HTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGC-TTEEEEEE
T ss_pred             HHhhCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEecCCCChhHHhhCCeEEEECCCHHHHHHHHHHH-hhcCCeEE
Confidence            45667889999999999999999999999988999999999999999999999999999999999999999 9998 999


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-hhccccCCCCchhhHHHH
Q 044696           86 MGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-RMIEKDFRPGGFAEYMVK  164 (220)
Q Consensus        86 ~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~f~~~~~~K  164 (220)
                      +++.+.+..+|+++|.+...++.++.|++.++++.|++++++.+++..+...++++..+.| .+.+++|+++|+++.+.|
T Consensus       155 ~~~~~~~~~~k~~~n~~~~~~~~~~~Ea~~l~~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~~l~~~~~~g~~~~~~~k  234 (289)
T 2cvz_A          155 VGPVGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVK  234 (289)
T ss_dssp             EESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHHHH
T ss_pred             cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcCHHHHHHHHHccCCCCHHHHHhccchhhcCCCCCCcChHHHHH
Confidence            9999999999999999999999999999999999999999999999988777788887888 899999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696          165 DMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING  219 (220)
Q Consensus       165 D~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~  219 (220)
                      |++.+++.+++.    |+++|+.+++.+.|+++.+.|+|++||+++++++++.+|
T Consensus       235 d~~~~~~~a~~~----gv~~p~~~~v~~~~~~a~~~g~~~~d~~~~~~~~~~~~~  285 (289)
T 2cvz_A          235 DLGIAMGVLDGE----KAPSPLLRLAREVYEMAKRELGPDADHVEALRLLERWGG  285 (289)
T ss_dssp             HHHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHCTTSBGGGGHHHHHHHHT
T ss_pred             HHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCccCHHHHHHHHHHhcC
Confidence            999999999999    999999999999999999999999999999999998766

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=100.00  E-value=1.8e-31  Score=229.93  Aligned_cols=206  Identities=23%  Similarity=0.402  Sum_probs=194.6

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT   84 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~   84 (220)
                      ++++.+.+|++|||+||++|...+++++.+.++|+.|+++|++|++..+..|++.++++|+++.+++++++|+.++. ++
T Consensus       109 ~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~~~~~v~~p~~g~~~~~~~g~~~~~~~g~~~~~~~v~~ll~~~g~~~~  188 (316)
T 2uyy_A          109 GVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSF  188 (316)
T ss_dssp             CGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEEECHHHHHHTHHHHHHHEEEEE
T ss_pred             hHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCccCChhHHhhCCEEEEeCCCHHHHHHHHHHHHHhcCCEE
Confidence            46678889999999999999999999999988899999999999999999999999999999999999999999999 99


Q ss_pred             ecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHHHH
Q 044696           85 FMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVK  164 (220)
Q Consensus        85 ~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~K  164 (220)
                      ++|++|.+...|+++|.+....+..+.|++.++++.|++++++.+++..+...++.+..+.|.+.+++|+++|+++.+.|
T Consensus       189 ~~~~~~~~~~~K~~~n~~~~~~~~~~~Ea~~la~~~G~~~~~~~~~~~~~~~~s~~~~~~~~~~l~~~~~~g~~~~~~~k  268 (316)
T 2uyy_A          189 FLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTGQSQQTLLDILNQGQLASIFLDQKCQNILQGNFKPDFYLKYIQK  268 (316)
T ss_dssp             ECSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHSTTCCHHHHHHHHHHHHTCCCCSSBHHHHHH
T ss_pred             EeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHcCCCCCHHHHHhhHHhhcCCCCCCCcHHHHHH
Confidence            99999999999999999999999999999999999999999999999988777888887888898999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHH
Q 044696          165 DMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIE  215 (220)
Q Consensus       165 D~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~  215 (220)
                      |++++++.+++.    |+++|+.+++.++|+++.+.|+|++||++++++++
T Consensus       269 d~~~~~~~a~~~----gv~~p~~~~v~~~~~~a~~~g~g~~d~~~~~~~~~  315 (316)
T 2uyy_A          269 DLRLAIALGDAV----NHPTPMAAAANEVYKRAKALDQSDNDMSAVYRAYI  315 (316)
T ss_dssp             HHHHHHHHHHHT----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGGGGTC
T ss_pred             HHHHHHHHHHHh----CCCChHHHHHHHHHHHHHhcCCCccCHHHHHHHHh
Confidence            999999999999    99999999999999999999999999999988653

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=99.97  E-value=8.1e-31  Score=230.34  Aligned_cols=202  Identities=20%  Similarity=0.251  Sum_probs=172.1

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc----
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG----   81 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~----   81 (220)
                      ++.+.+.+|++|||+||+.|.+++++++.+.++|++|+|+||+|++..++.|+ .+|+||+++++++++|+|+.++    
T Consensus       100 ~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg~~~a~~G~-~im~GG~~~a~~~~~~ll~~lg~~~~  178 (358)
T 4e21_A          100 RMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGGIFGLERGY-CLMIGGEKQAVERLDPVFRTLAPGIG  178 (358)
T ss_dssp             HHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECGGGHHHHCC-EEEEESCHHHHHHTHHHHHHHSCCGG
T ss_pred             HHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCCHHHHhcCC-eeeecCCHHHHHHHHHHHHHhccccc
Confidence            56778899999999999999999999999999999999999999999999999 9999999999999999999999    


Q ss_pred             ----------------c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------------------
Q 044696           82 ----------------K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA------------------------  120 (220)
Q Consensus        82 ----------------~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~------------------------  120 (220)
                                      + ++|+|+.|+|+.+|+++|.+.++.+++++|++.++++.                        
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~G~~G~g~~~Kl~~n~l~~~~i~~~aE~~~la~~a~~~~~~~~~~~~~~~~~~~~~~~~  258 (358)
T 4e21_A          179 AAPRTPGREKREGTAELGYLHCGPSGAGHFVKMVHNGIEYGLMAAYAEGLNILHHANAGKEGQGADAETAPLRNPDFYRY  258 (358)
T ss_dssp             GSCCCTTGGGCCSSGGGTEEEEESTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC--------------CGGGCCC
T ss_pred             cCcccccccccccccccceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccchhccc
Confidence                            7 99999999999999999999999999999999999998                        


Q ss_pred             CCCHHHHHHHHhccC-CChHHHHhhhhhhccccCCCCc-hhhHHHHHH---HHHHHHHhhcccCCCCCccHHHHHHHHHH
Q 044696          121 GLDVRKWRDAVKGGA-AGSMAMELYGERMIEKDFRPGG-FAEYMVKDM---GMGVDVVEESEDERVVVLPGAALGKQLFS  195 (220)
Q Consensus       121 Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~~f-~~~~~~KD~---~~~~~~a~~~~~~~g~~~p~~~~~~~~~~  195 (220)
                      |+|++++.++++.++ ..||+++...+.+.. +  |.+ .+....||.   +++++++.+.    |+|+|++..+  +|.
T Consensus       259 ~~d~~~i~~~~~~g~~~~s~~l~~~~~~~~~-~--p~~~~~~~~~~d~g~~r~~~~~A~~~----gvp~p~~~~a--l~~  329 (358)
T 4e21_A          259 DLDLADITEVWRRGSVISSWLLDLSATALLD-S--PDLQEFQGRVSDSGEGRWTVAAAIDE----GVPAHVLSSA--LYE  329 (358)
T ss_dssp             CCCHHHHHHHHTTTSTTCBHHHHHHHHHHHH-C--TTCTTC--CCCCCSHHHHHHHHHHHH----TCCCHHHHHH--HHH
T ss_pred             CCCHHHHHHHHhCccHHHHHHHHHHHHHHhh-C--CChHHHHHHHHhcCcHHHHHHHHHHc----CCChHHHHHH--HHH
Confidence            999999999999887 789999887765543 3  322 234445555   7899999999    9999999875  555


Q ss_pred             HHHHCCCCCCChHH-HHHHHHHhcC
Q 044696          196 AMVANGDGKFGTQG-LVSVIERING  219 (220)
Q Consensus       196 ~a~~~G~g~~d~~a-v~~~~~~~~~  219 (220)
                      +...+  ++.+++. ++...|+..|
T Consensus       330 ~~~s~--~~~~~~~~l~~a~r~~fG  352 (358)
T 4e21_A          330 RFSSR--GEDDFANRLLSAMRYEFG  352 (358)
T ss_dssp             HHHHT--TTTHHHHHHHHHHC----
T ss_pred             HHHHC--CCcccHHHHHHHHHHhcC
Confidence            55553  5667654 8888777655

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=99.97  E-value=8.4e-30  Score=231.31  Aligned_cols=187  Identities=15%  Similarity=0.179  Sum_probs=167.5

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c-
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P-   83 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~-   83 (220)
                      ++.+.+.+|++|||+||+.|.+++++++.+.++|++|+|+||+|++..+++|. .+|+||+++++++++|+|+.++. + 
T Consensus        88 ~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsGg~~gA~~G~-~im~GG~~ea~~~v~pll~~ig~~v~  166 (484)
T 4gwg_A           88 KLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSGGEEGARYGP-SLMPGGNKEAWPHIKTIFQGIAAKVG  166 (484)
T ss_dssp             HHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHHHHHSCBCT
T ss_pred             HHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccCCHHHHhcCC-eeecCCCHHHHHHHHHHHHHhcCccc
Confidence            56788899999999999999999999999999999999999999999999999 99999999999999999999998 8 


Q ss_pred             ------eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHH---hccCCChHHHHhhhhhhccccC
Q 044696           84 ------TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAV---KGGAAGSMAMELYGERMIEKDF  153 (220)
Q Consensus        84 ------~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l---~~~~~~s~~~~~~~~~~~~~~~  153 (220)
                            +|+|+.|+|+.+||++|.+.++++++++|++.++++ .|+|++++.+++   +.+...||+++.+.+.+..+|+
T Consensus       167 ~~~~~~~~~G~~Gag~~vKmv~N~i~~~~m~~iaEa~~l~~~~~Gld~~~l~~v~~~w~~G~~~S~l~e~~~~~l~~~D~  246 (484)
T 4gwg_A          167 TGEPCCDWVGDEGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGMAQDEMAQAFEDWNKTELDSFLIEITANILKFQDT  246 (484)
T ss_dssp             TSCBSBCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCT
T ss_pred             CCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHcCCCccchHHHHHHHHHhcCCc
Confidence                  999999999999999999999999999999999999 999999999886   5777899999999999998888


Q ss_pred             CCCchhhHHHHH-----H-HHHHHHHhhcccCCCCCccH-HHHHHHHHHHH
Q 044696          154 RPGGFAEYMVKD-----M-GMGVDVVEESEDERVVVLPG-AALGKQLFSAM  197 (220)
Q Consensus       154 ~~~f~~~~~~KD-----~-~~~~~~a~~~~~~~g~~~p~-~~~~~~~~~~a  197 (220)
                      ++++.++...+.     . +...+.+.+.    |+|+|+ .+++..+|...
T Consensus       247 ~g~~~ld~i~d~~~~kgtG~wt~~~A~~~----gvp~p~i~~av~~R~~S~  293 (484)
T 4gwg_A          247 DGKHLLPKIRDSAGQKGTGKWTAISALEY----GVPVTLIGEAVFARCLSS  293 (484)
T ss_dssp             TSSBSGGGSCCCCCSSCTTHHHHHHHHHH----TCCCHHHHHHHHHHHHHH
T ss_pred             cCCccHHHHhccccCcchHHHHHHHHHHc----CCCchHHHHHHHHHHHhh
Confidence            766777776433     3 5677889999    999994 44455665443

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=99.94  E-value=2.1e-26  Score=210.02  Aligned_cols=180  Identities=18%  Similarity=0.270  Sum_probs=166.6

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc---
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK---   82 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~---   82 (220)
                      ++.+.+.+|++|||+||+.|..++++.+.+.++|++|+|+||+|+|..++.|+ .+|+||+++++++++|+|+.++.   
T Consensus        94 ~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~pVsgg~~~a~~G~-~im~gg~~e~~~~v~~ll~~~g~~~d  172 (497)
T 2p4q_A           94 QIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGILFVGSGVSGGEEGARYGP-SLMPGGSEEAWPHIKNIFQSISAKSD  172 (497)
T ss_dssp             HHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECGGGHHHHHHHHHHHSCEET
T ss_pred             HHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCceeCCCcccChhHhhcCC-eEEecCCHHHHHHHHHHHHHhcCccC
Confidence            46778889999999999999999999999999999999999999999999999 89999999999999999999986   


Q ss_pred             ----ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---ccCCChHHHHhhhhhhccccCC
Q 044696           83 ----PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAVK---GGAAGSMAMELYGERMIEKDFR  154 (220)
Q Consensus        83 ----~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~~  154 (220)
                          ++|+|+.|.|+.+|+++|.+.+..+.+++|++.++++ .|++++++.+++.   .+...|++++.+.+.+.++||+
T Consensus       173 Ge~~v~~vg~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~~  252 (497)
T 2p4q_A          173 GEPCCEWVGPAGAGHYVKMVHNGIEYGDMQLICEAYDIMKRLGGFTDKEISDVFAKWNNGVLDSFLVEITRDILKFDDVD  252 (497)
T ss_dssp             TEESCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTTTCBHHHHHHHHHHTCBCTT
T ss_pred             CCCceEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHhcCCccccHHHHHHHHHHhcCCCC
Confidence                4889999999999999999999999999999999999 6999999999984   5668899999999989999996


Q ss_pred             CCchhhHHH-----HHHH-HHHHHHhhcccCCCCCccHHHHH
Q 044696          155 PGGFAEYMV-----KDMG-MGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       155 ~~f~~~~~~-----KD~~-~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                      +.|.++.+.     ||.. ++.+.+++.    |+|+|+...+
T Consensus       253 ~~~~vd~i~D~~~~KgtG~~~~~~A~~~----Gv~~P~~~~a  290 (497)
T 2p4q_A          253 GKPLVEKIMDTAGQKGTGKWTAINALDL----GMPVTLIGEA  290 (497)
T ss_dssp             SSBGGGGSCCCCCCCSHHHHHHHHHHHH----TCCCHHHHHH
T ss_pred             CccHHHHHHHhhccchHHHHHHHHHHHc----CCCCchHHHH
Confidence            679999888     8875 789999999    9999999885

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=99.92  E-value=1.1e-24  Score=198.01  Aligned_cols=180  Identities=14%  Similarity=0.209  Sum_probs=163.7

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc---
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK---   82 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~---   82 (220)
                      ++.+.+.+|++|||+||+.|..++++.+.+.++|++|+++||+|++..+..|. ++|+||+++++++++|+|+.++.   
T Consensus        98 ~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~  176 (480)
T 2zyd_A           98 SLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGP-SIMPGGQKEAYELVAPILTKIAAVAE  176 (480)
T ss_dssp             HHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEESCHHHHHHHHHHHHHHSCBCT
T ss_pred             HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCCeeCCccccCHhHHhcCC-eEEecCCHHHHHHHHHHHHHHhcccc
Confidence            46678889999999999999999999999999999999999999999999999 89999999999999999999987   


Q ss_pred             -----ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---ccCCChHHHHhhhhhhccccC
Q 044696           83 -----PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAVK---GGAAGSMAMELYGERMIEKDF  153 (220)
Q Consensus        83 -----~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~  153 (220)
                           +.++|+.|.|+.+|+++|.+.+..+.+++|++.++++ .|++++++.+++.   .+...|++++.+.+.+.++||
T Consensus       177 dGe~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~lGl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d~  256 (480)
T 2zyd_A          177 DGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLTNEELAQTFTEWNNGELSSYLIDITKDIFTKKDE  256 (480)
T ss_dssp             TSCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTTTCBHHHHHHHHHHHCBCT
T ss_pred             CCCceEEEECCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCcccHHHHHHHHHHhcCCC
Confidence                 3789999999999999999999999999999999999 6999999999884   466788999988888888999


Q ss_pred             CCCchhhHHH-----HHH-HHHHHHHhhcccCCCCCccHHHHH
Q 044696          154 RPGGFAEYMV-----KDM-GMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       154 ~~~f~~~~~~-----KD~-~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                      +++|.++.+.     ||. +.+.+.+++.    |+|+|+.+.+
T Consensus       257 ~~~~~v~~i~D~~~~k~tG~~~~~~A~~~----gv~~Pi~~~a  295 (480)
T 2zyd_A          257 DGNYLVDVILDEAANKGTGKWTSQSALDL----GEPLSLITES  295 (480)
T ss_dssp             TSSBGGGGBCCCCCCCSCTTHHHHHHHHH----TCCCHHHHHH
T ss_pred             CCcchHHHHHHHhcCchHHHHHHHHHHHc----CCCCchHHHH
Confidence            6678888766     444 4788999999    9999999886

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=99.91  E-value=2.4e-23  Score=189.31  Aligned_cols=185  Identities=16%  Similarity=0.175  Sum_probs=165.9

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c-
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P-   83 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~-   83 (220)
                      .+.+.+.+|++|||+||+.|..++++.+.+.++|++|+++||+|++..+..|+ .+|+||+++++++++++|+.++. + 
T Consensus        86 ~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~pv~g~~~~a~~g~-~i~~gg~~e~~~~v~~ll~~~g~~v~  164 (482)
T 2pgd_A           86 KLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP-SLMPGGNKEAWPHIKAIFQGIAAKVG  164 (482)
T ss_dssp             HHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECTTTHHHHHHHHHHHSCBCT
T ss_pred             HHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEeCCCCCCChhhhccCC-eEEeCCCHHHHHHHHHHHHHhhhhcc
Confidence            35667889999999999999999999999988999999999999999999999 78999999999999999999998 7 


Q ss_pred             ------eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHh---ccCCChHHHHhhhhhhccccC
Q 044696           84 ------TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA-GLDVRKWRDAVK---GGAAGSMAMELYGERMIEKDF  153 (220)
Q Consensus        84 ------~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~-Gl~~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~  153 (220)
                            +++|+.|.|..+|+++|.+.+..+.+++|++.++++. |++++++.+++.   .+...|++.+.+.+.+..++|
T Consensus       165 d~~~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~~G~~~~~~~~~~~~w~~g~~~S~l~~~~~~~l~~~d~  244 (482)
T 2pgd_A          165 TGEPCCDWVGDDGAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITASILKFQDA  244 (482)
T ss_dssp             TSCBSCCCCEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCT
T ss_pred             CCCcceEEECCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHhcCCCcCchHHHHHhHHhhccCC
Confidence                  7899999999999999999999999999999999999 999999999985   455778888888888888898


Q ss_pred             CCCchhhHH------HHHHHHHHHHHhhcccCCCCCccHHH-HHHHHHH
Q 044696          154 RPGGFAEYM------VKDMGMGVDVVEESEDERVVVLPGAA-LGKQLFS  195 (220)
Q Consensus       154 ~~~f~~~~~------~KD~~~~~~~a~~~~~~~g~~~p~~~-~~~~~~~  195 (220)
                      +++|.++.+      .|+.+.+.+.+++.    |+|+|+.. .+.+++.
T Consensus       245 ~~~~~ld~i~d~~~~k~t~~~~~~~A~~~----Gv~~P~i~~av~~~~~  289 (482)
T 2pgd_A          245 DGKHLLPKIRDSAGQKGTGKWTAISALEY----GVPVTLIGEAVFARCL  289 (482)
T ss_dssp             TSSBSGGGSCCCCCCCSHHHHHHHHHHHH----TCCCHHHHHHHHHHHH
T ss_pred             CCCeeecccccccccccHHHHHHHHHHHc----CCCcchHHHHHHHHhh
Confidence            878888876      47778899999999    99999995 4555553

>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6

Probab=99.91  E-value=9.5e-24  Score=176.97  Aligned_cols=181  Identities=15%  Similarity=0.080  Sum_probs=153.3

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-cee
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTF   85 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~   85 (220)
                      +.+.+++  +|||+||++|.+.+++++.+.++|  |+|+||+++|..++.|.+ ++++|+++  +++++ |+.+|. +++
T Consensus        76 ~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~~g--~~~~~v~~~~~~~~~g~~-~~~~g~~~--~~~~~-l~~~g~~~~~  147 (264)
T 1i36_A           76 AGRHVRG--IYVDINNISPETVRMASSLIEKGG--FVDAAIMGSVRRKGADIR-IIASGRDA--EEFMK-LNRYGLNIEV  147 (264)
T ss_dssp             HHTTCCS--EEEECSCCCHHHHHHHHHHCSSSE--EEEEEECSCHHHHGGGCE-EEEESTTH--HHHHG-GGGGTCEEEE
T ss_pred             HHHhcCc--EEEEccCCCHHHHHHHHHHHhhCC--eeeeeeeCCccccccCCe-EEecCCcH--HHhhh-HHHcCCeeEE
Confidence            4455544  999999999999999999998877  999999999999999998 89999887  88999 999999 999


Q ss_pred             cCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHHHH
Q 044696           86 MGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVK  164 (220)
Q Consensus        86 ~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~K  164 (220)
                      +++ +|.+..+|+++|.+...++.++.|++.++++.|++++ .++.+..+.+.++.  .+.+.+.+++|.++|+   ..|
T Consensus       148 ~~~~~g~~~~~kl~~n~~~~~~~~~~~Ea~~la~~~G~~~~-~~~~~~~~~g~~~~--~~~~~~~~~~~~~g~~---~~~  221 (264)
T 1i36_A          148 RGREPGDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEED-VLEMLEYTEGNDFR--ESAISRLKSSCIHARR---RYE  221 (264)
T ss_dssp             CSSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH-HHHHHHTTSCSSTH--HHHHHHHHHHHHTHHH---HHH
T ss_pred             CCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHH-HHHHHHHhcCccHH--HHHHHHhcCCCCcchh---hHH
Confidence            998 8999999999999999999999999999999999987 77998876544443  2467788888888776   689


Q ss_pred             HHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCC
Q 044696          165 DMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFG  206 (220)
Q Consensus       165 D~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d  206 (220)
                      |++.+++.+++    . +++|+.+++.++|+++.+.|++.+|
T Consensus       222 ~~~~~~~~a~~----~-v~~p~~~~v~~~~~~~~~~~~~~~~  258 (264)
T 1i36_A          222 EMKEVQDMLAE----V-IDPVMPTCIIRIFDKLKDVKVSADA  258 (264)
T ss_dssp             HHHHHHHHHHT----T-SCCSHHHHHHHHHHHHCC------G
T ss_pred             HHHHHHHHHHH----h-cCchHHHHHHHHHHHHHHcCCChhh
Confidence            99999998853    3 7999999999999999998887665

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=99.91  E-value=4.8e-23  Score=186.98  Aligned_cols=180  Identities=19%  Similarity=0.276  Sum_probs=162.3

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c-
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P-   83 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~-   83 (220)
                      ++.+.+.+|++|||+||+.|..++++.+.+.++|++|+++||+|++..+..|. .+|+||+++.+++++++|+.++. + 
T Consensus        88 ~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~  166 (474)
T 2iz1_A           88 SLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINFIGTGVSGGEKGALLGP-SMMPGGQKEAYDLVAPIFEQIAAKAP  166 (474)
T ss_dssp             HHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEEEEEEECSHHHHHHHCC-CEEEEECHHHHHHHHHHHHHHSCBCT
T ss_pred             HHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeEECCCCCCChhhhccCC-eEEecCCHHHHHHHHHHHHHHhcccc
Confidence            45677889999999999999999999999988899999999999999999999 78999999999999999999987 4 


Q ss_pred             -------eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---ccCCChHHHHhhhhhhcccc
Q 044696           84 -------TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAVK---GGAAGSMAMELYGERMIEKD  152 (220)
Q Consensus        84 -------~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~  152 (220)
                             .++|+.|.|+.+|+++|.+.+..+.+++|++.++++ .|++++++.+++.   .+...|++++.+.+.+.++|
T Consensus       167 ~dge~~~~~~g~~g~g~~~Kl~~N~~~~~~~~~laEa~~l~~~~~Gl~~~~~~~l~~~w~~g~~~s~l~~~~~~~l~~~d  246 (474)
T 2iz1_A          167 QDGKPCVAYMGANGAGHYVKMVHNGIEYGDMQLIAESYDLLKRILGLSNAEIQAIFEEWNEGELDSYLIEITKEVLKRKD  246 (474)
T ss_dssp             TTCCBSBCCCBSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHTTCBC
T ss_pred             cCCCceEEEECCccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhcCCCccccHHHhhhhHhhcCC
Confidence                   788999999999999999999999999999999999 7999999999984   45577888888888888889


Q ss_pred             CCCC-chhhHHH-----HHHH-HHHHHHhhcccCCCCCccHHHHH
Q 044696          153 FRPG-GFAEYMV-----KDMG-MGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       153 ~~~~-f~~~~~~-----KD~~-~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                      |.++ |.++.+.     ||.. .+.+.+++.    |+|+|+.+.+
T Consensus       247 ~~~g~~~vd~i~D~~~~k~tG~~~~~~A~~~----gv~~P~~~~a  287 (474)
T 2iz1_A          247 DEGEGYIVDKILDKAGNKGTGKWTSESALDL----GVPLPLITES  287 (474)
T ss_dssp             SSSSSBGGGGBCSCCCCCSHHHHHHHHHHHH----TCCCHHHHHH
T ss_pred             CCCChhHHHHHHHhhcccchHHHHHHHHHHc----CCCCchHHHH
Confidence            9876 8888766     6665 788999999    9999999886

>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}

Probab=99.90  E-value=2.9e-23  Score=188.13  Aligned_cols=180  Identities=15%  Similarity=0.082  Sum_probs=156.0

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHHHH--hcC------CcEEEecCCCChHHhhccce---eEEecCCHHhHHHH
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKVAR--ERD------CWAVDAPVSGGDIGARDGKL---AIFAAGDSAVVQWL   73 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~--~~G------~~~ldapV~g~~~~a~~g~l---~i~~gG~~~~~~~~   73 (220)
                      +++.+++++|++||++||+.|.+++++++.+.  +.|      ..++++|+...+..+..+.+   .+++|++++.++++
T Consensus       131 ~~i~~~l~~g~iVV~~STv~pgtt~~v~~~ile~~~g~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~Iv~G~~~~~~~~~  210 (478)
T 3g79_A          131 RNVGKYLKPGMLVVLESTITPGTTEGMAKQILEEESGLKAGEDFALAHAPERVMVGRLLKNIREHDRIVGGIDEASTKRA  210 (478)
T ss_dssp             HHHHHHCCTTCEEEECSCCCTTTTTTHHHHHHHHHHCCCBTTTBEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHH
T ss_pred             HHHHhhcCCCcEEEEeCCCChHHHHHHHHHHHHHhcCCCcCCceeEEeCCccCCccchhhhhcCCcEEEEeCCHHHHHHH
Confidence            57888999999999999999999999997543  345      46899999888777766655   68899999999999


Q ss_pred             HHHHHHh-cc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccc
Q 044696           74 TPLFEVL-GK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEK  151 (220)
Q Consensus        74 ~~~l~~~-~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~  151 (220)
                      +|+|+.+ +. ++++|++++|+.+|+++|++.+.+++.++|++.+|++.|+|+++++++++..+.    +     +|..+
T Consensus       211 ~~ly~~~~~~~~~~~~~~~~aE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~~----~-----ri~~~  281 (478)
T 3g79_A          211 VELYSPVLTVGQVIPMSATAAEVTKTAENTFRDLQIAAINQLALYCEAMGINVYDVRTGVDSLKG----E-----GITRA  281 (478)
T ss_dssp             HHHHGGGCSSCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSCC----S-----SSCCC
T ss_pred             HHHHhhhccCCeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHCCCch----h-----hhccc
Confidence            9999999 78 999999999999999999999999999999999999999999999999986421    1     55566


Q ss_pred             cCCCCc--hhhHHHHHHHHHHHHHhhcccCCCCC-------ccHHHHHHHHHHHH
Q 044696          152 DFRPGG--FAEYMVKDMGMGVDVVEESEDERVVV-------LPGAALGKQLFSAM  197 (220)
Q Consensus       152 ~~~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~-------~p~~~~~~~~~~~a  197 (220)
                      .|.|+|  ...++.||+.++++.+++.    |++       +++..++++..+.-
T Consensus       282 ~~~PG~G~GG~c~~KD~~~l~~~a~~~----g~~~~~~~~~~~li~~~~~iN~~~  332 (478)
T 3g79_A          282 VLWPGAGVGGHCLTKDTYHLERGVKIG----RGELDYPEGADSIYVLARKVNDFM  332 (478)
T ss_dssp             CCCCCSCCCSSHHHHHHHHHHHHHTTS----SCCCCCCSSCCCHHHHHHHHHHHH
T ss_pred             cCCCCCCcchhhHHHHHHHHHHHHHHc----CCCcccccchhHHHHHHHHHHHHH
Confidence            777765  6779999999999999999    987       89999998765543

>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}

Probab=99.90  E-value=2.7e-23  Score=187.11  Aligned_cols=176  Identities=15%  Similarity=0.114  Sum_probs=154.7

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccce--------eEEecCC-HHhHHHHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKL--------AIFAAGD-SAVVQWLTPL   76 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l--------~i~~gG~-~~~~~~~~~~   76 (220)
                      ++.+++++|++||++||+.|.+++++.+.+.+++.. .|.+|.++|..++.|++        .+++||+ ++++++++++
T Consensus       114 ~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e~~~~-~d~~v~~~Pe~a~eG~a~~d~~~p~~ivvG~~~~~~~~~~~~l  192 (446)
T 4a7p_A          114 EIAENLTKPSVIVTKSTVPVGTGDEVERIIAEVAPN-SGAKVVSNPEFLREGAAIEDFKRPDRVVVGTEDEFARQVMREI  192 (446)
T ss_dssp             HHHHSCCSCCEEEECSCCCTTHHHHHHHHHHHHSTT-SCCEEEECCCCCCTTSHHHHHHSCSCEEEECSCHHHHHHHHHH
T ss_pred             HHHHhcCCCCEEEEeCCCCchHHHHHHHHHHHhCCC-CCceEEeCcccccccchhhhccCCCEEEEeCCcHHHHHHHHHH
Confidence            577889999999999999999999999999988766 78999999999999986        7899996 7899999999


Q ss_pred             HHHhcc-c---eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcccc
Q 044696           77 FEVLGK-P---TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKD  152 (220)
Q Consensus        77 l~~~~~-~---~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~  152 (220)
                      |+.+.+ .   +++++++.|+.+|+++|.+.+.+++.++|+..+|++.|+|+++++++++..+.           +-...
T Consensus       193 y~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~~GiD~~~v~~~~~~~~r-----------ig~~~  261 (446)
T 4a7p_A          193 YRPLSLNQSAPVLFTGRRTSELIKYAANAFLAVKITFINEIADLCEQVGADVQEVSRGIGMDNR-----------IGGKF  261 (446)
T ss_dssp             HCSCC-----CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTT-----------C---C
T ss_pred             HHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcCCC-----------CCCcc
Confidence            999986 3   88899999999999999999999999999999999999999999999987531           11112


Q ss_pred             CC--CCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          153 FR--PGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       153 ~~--~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                      +.  ++|...++.||+.++++.+++.    |+++|+++++++.++..
T Consensus       262 l~pg~G~gg~c~~KD~~~l~~~A~~~----g~~~~l~~~~~~iN~~~  304 (446)
T 4a7p_A          262 LHAGPGYGGSCFPKDTLALMKTAADN----ETPLRIVEATVQVNDAR  304 (446)
T ss_dssp             CCCCSCCCTTTHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHH
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHHhc----CCCCHHHHHHHHHHHHH
Confidence            23  4689999999999999999999    99999999998887654

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=99.89  E-value=3.8e-22  Score=181.27  Aligned_cols=180  Identities=20%  Similarity=0.194  Sum_probs=160.9

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc---
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK---   82 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~---   82 (220)
                      .+.+.+.+|++|||+||+.|..++++.+.+.++|++|+++||+|++..+..|. .+|+||+++++++++++|+.++.   
T Consensus        88 ~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~gg~~~a~~g~-~i~~gg~~~~~~~v~~ll~~~g~~~~  166 (478)
T 1pgj_A           88 QLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP-AFFPGGTLSVWEEIRPIVEAAAAKAD  166 (478)
T ss_dssp             HHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC-EEEEEECHHHHHHHHHHHHHHSCBCT
T ss_pred             HHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeeccCCHHHHhcCC-eEeccCCHHHHHHHHHHHHHhccccc
Confidence            35567889999999999999999999999988899999999999999999999 78999999999999999999986   


Q ss_pred             -----ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh----ccCCChHHHHhhhhhhccccC
Q 044696           83 -----PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVK----GGAAGSMAMELYGERMIEKDF  153 (220)
Q Consensus        83 -----~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~----~~~~~s~~~~~~~~~~~~~~~  153 (220)
                           ++++|+.|.|..+|+++|.+.+..+.+++|++.++++.|++++++.+++.    .+...|+..+.+.+.+.++||
T Consensus       167 dg~~~v~~~g~~G~g~~~Kl~~N~~~~~~~~~i~Ea~~l~~~~G~~~~~~~~l~~~w~~~g~~~s~l~~~~~~~l~~~d~  246 (478)
T 1pgj_A          167 DGRPCVTMNGSGGAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDK  246 (478)
T ss_dssp             TSCBSCCCCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCT
T ss_pred             CCCeeEEEeCCchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhccCCCcCchHHHhhchhhhcCCC
Confidence                 37889999999999999999999999999999999999999999999986    566778888888887877888


Q ss_pred             CCCchhhHHH-----HHH-HHHHHHHhhcccCCCCCccHHHHH
Q 044696          154 RPGGFAEYMV-----KDM-GMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       154 ~~~f~~~~~~-----KD~-~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                      ...|.++.+.     ||. +.+.+.+++.    |+|+|+.+.+
T Consensus       247 ~G~~~ld~i~D~~~~kgtg~~~~~~A~~~----Gv~~Pi~~~a  285 (478)
T 1pgj_A          247 DGSYLTEHVMDRIGSKGTGLWSAQEALEI----GVPAPSLNMA  285 (478)
T ss_dssp             TSSBGGGGBCCCCCCCSHHHHHHHHHHHH----TCCCHHHHHH
T ss_pred             CChhHHHHHHHHhcCccHHHHHHHHHHHh----CCCChHHHHH
Confidence            3238888776     554 7999999999    9999999983

>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}

Probab=99.88  E-value=1.4e-22  Score=182.75  Aligned_cols=177  Identities=14%  Similarity=0.109  Sum_probs=156.1

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCc---EEEecCCCChHHhhccce--------eEEecCC-HHhHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCW---AVDAPVSGGDIGARDGKL--------AIFAAGD-SAVVQWL   73 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~---~ldapV~g~~~~a~~g~l--------~i~~gG~-~~~~~~~   73 (220)
                      ++.+.+++|++||++||+.|.+++++.+.+.+++..   .+|.+|..+|..++.|++        .+++||+ +++++++
T Consensus       107 ~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~~~~~~~~~~d~~v~~~Pe~a~eG~~~~~~~~p~~ivvG~~~~~~~~~~  186 (450)
T 3gg2_A          107 SIGRAMSRYILIVTKSTVPVGSYRLIRKAIQEELDKREVLIDFDIASNPEFLKEGNAIDDFMKPDRVVVGVDSDRARELI  186 (450)
T ss_dssp             HHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHTTCCCCEEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHH
T ss_pred             HHHhhCCCCCEEEEeeeCCCcchHHHHHHHHHhccccCcCcceeEEechhhhcccchhhhccCCCEEEEEcCCHHHHHHH
Confidence            466788999999999999999999999999886543   378999999998999887        6888985 7899999


Q ss_pred             HHHHHHhcc---ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcc
Q 044696           74 TPLFEVLGK---PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIE  150 (220)
Q Consensus        74 ~~~l~~~~~---~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~  150 (220)
                      +++++.+++   ++++++++.|+.+|+++|.+.+.++..++|+..+|++.|+|++++++++...+           ++..
T Consensus       187 ~~l~~~~~~~~~~~~~~d~~~aE~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~-----------rig~  255 (450)
T 3gg2_A          187 TSLYKPMLLNNFRVLFMDIASAEMTKYAANAMLATRISFMNDVANLCERVGADVSMVRLGIGSDS-----------RIGS  255 (450)
T ss_dssp             HHHHTTTCCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTST-----------TTCS
T ss_pred             HHHHHHHhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHcCCC-----------CCCc
Confidence            999999975   68889999999999999999999999999999999999999999999998752           3434


Q ss_pred             ccCCC--CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          151 KDFRP--GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       151 ~~~~~--~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                      ..|.|  +|...++.||++++++.+++.    |+++|+++++++.++..
T Consensus       256 ~~~~pg~G~gg~c~~KD~~~l~~~a~~~----g~~~~l~~~~~~iN~~~  300 (450)
T 3gg2_A          256 KFLYPGCGYGGSCFPKDVKALIRTAEDN----GYRMEVLEAVERVNEKQ  300 (450)
T ss_dssp             SSCCCSSCCCSSHHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCcccHHhhHHHHHHHHHHc----CCCcHHHHHHHHHHHHH
Confidence            45555  488999999999999999999    99999999999887654

>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*

Probab=99.86  E-value=1.5e-21  Score=174.80  Aligned_cols=172  Identities=12%  Similarity=0.089  Sum_probs=138.4

Q ss_pred             ccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHh-cCC------cEEEecCCCChHHhhccce---eEEecCCHHhHHHH
Q 044696            4 PDGIVSALNPGAVYVDTTSSHPALAREIFKVARE-RDC------WAVDAPVSGGDIGARDGKL---AIFAAGDSAVVQWL   73 (220)
Q Consensus         4 ~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~-~G~------~~ldapV~g~~~~a~~g~l---~i~~gG~~~~~~~~   73 (220)
                      .+++.+++++|++||++||+.|.+++++.+.+.+ +|.      .++++|....+..+..+.+   .+++|+++++++++
T Consensus       112 ~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i~e~~g~~~~~d~~v~~~Pe~~~~G~A~~~~~~p~~Iv~G~~~~~~~~~  191 (431)
T 3ojo_A          112 LDSILPFLKKGNTIIVESTIAPKTMDDFVKPVIENLGFTIGEDIYLVHCPERVLPGKILEELVHNNRIIGGVTKACIEAG  191 (431)
T ss_dssp             HHHHGGGCCTTEEEEECSCCCTTHHHHTHHHHHHTTTCCBTTTEEEEECCCCCCTTSHHHHHHHSCEEEEESSHHHHHHH
T ss_pred             HHHHHHhCCCCCEEEEecCCChhHHHHHHHHHHHHcCCCcCCCeEEEECCCcCCCcchhhcccCCCEEEEeCCHHHHHHH
Confidence            3578899999999999999999999999987654 564      6899998877766666665   78999999999999


Q ss_pred             HHHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcccc
Q 044696           74 TPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKD  152 (220)
Q Consensus        74 ~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~  152 (220)
                      +++++.+++ ++|+|++++|+.+|+++|++.+.+++.+.|+..+|++.|+|+++++++++..+.           +  +-
T Consensus       192 ~~ly~~~~~~~~~~~~~~~AE~~Kl~~N~~~a~~Ia~~nE~~~l~e~~GiD~~~v~~~~~~~~r-----------i--~~  258 (431)
T 3ojo_A          192 KRVYRTFVQGEMIETDARTAEMSKLMENTYRDVNIALANELTKICNNLNINVLDVIEMANKHPR-----------V--NI  258 (431)
T ss_dssp             HHHHTTTCCSCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTT-----------C--CC
T ss_pred             HHHHHHHhCCcEEeCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHccCCC-----------c--cc
Confidence            999999999 999999999999999999999999999999999999999999999999986531           1  12


Q ss_pred             CCC--CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHH
Q 044696          153 FRP--GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFS  195 (220)
Q Consensus       153 ~~~--~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~  195 (220)
                      |.|  +|.-.++.||.......+++.    |   ++..++++..+
T Consensus       259 l~pG~G~GG~C~pkD~~~L~~~a~~~----~---~li~~~~~iN~  296 (431)
T 3ojo_A          259 HQPGPGVGGHCLAVDPYFIIAKDPEN----A---KLIQTGREINN  296 (431)
T ss_dssp             CCCCSCCCCCCBCSCC---------C----C---HHHHHHHHHHH
T ss_pred             CCCCCCccccchhhhHHHHHHHHHHH----h---HHHHHHHHHHH
Confidence            334  467777889999999988888    7   77777766544

>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A

Probab=99.83  E-value=8.9e-21  Score=171.72  Aligned_cols=175  Identities=13%  Similarity=0.081  Sum_probs=149.6

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhcccee--------EEecC-----CHHhHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA--------IFAAG-----DSAVVQW   72 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~--------i~~gG-----~~~~~~~   72 (220)
                      ++.+.+++|++||++||+.|.+++++.+.+.+.+..++|+||+++|..+..|++.        +++||     +++++++
T Consensus       116 ~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe~~~~G~~~~d~~~~~rivvGg~~~~~~~~~~~~  195 (467)
T 2q3e_A          116 RIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPEFLAEGTAIKDLKNPDRVLIGGDETPEGQRAVQA  195 (467)
T ss_dssp             HHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCCCCCTTSHHHHHHSCSCEEEECCSSHHHHHHHHH
T ss_pred             HHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHHHhhcccchhhccCCCEEEECCCCCCCCHHHHHH
Confidence            4667788999999999999999999999998888778999999999999999986        88999     7788999


Q ss_pred             HHHHHHHh-cc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhcc
Q 044696           73 LTPLFEVL-GK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIE  150 (220)
Q Consensus        73 ~~~~l~~~-~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~  150 (220)
                      ++++++.+ +. ++++++++.|..+|+++|.+...+++.+.|++.++++.|+|++++.+++...+..           ..
T Consensus       196 ~~~l~~~~~g~~~~~~~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~~~-----------~~  264 (467)
T 2q3e_A          196 LCAVYEHWVPREKILTTNTWSSELSKLAANAFLAQRISSINSISALCEATGADVEEVATAIGMDQRI-----------GN  264 (467)
T ss_dssp             HHHHHTTTSCGGGEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHTSTTT-----------CS
T ss_pred             HHHHHHHhccCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHcCCCCC-----------Cc
Confidence            99999999 77 9999999999999999999999999999999999999999999999999875421           11


Q ss_pred             ccCCCC--chhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696          151 KDFRPG--GFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVAN  200 (220)
Q Consensus       151 ~~~~~~--f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~  200 (220)
                      ..|.|+  |...++.||++++++.+++.    |++     .+.++|+.+.+.
T Consensus       265 ~~~~pg~g~gg~c~~kD~~~l~~~a~~~----g~~-----~~~~~~~~~~~~  307 (467)
T 2q3e_A          265 KFLKASVGFGGSCFQKDVLNLVYLCEAL----NLP-----EVARYWQQVIDM  307 (467)
T ss_dssp             SSCCCCSCCCSSSHHHHHHHHHHHHHHT----TCH-----HHHHHHHHHHHH
T ss_pred             cccCCCCCCCCccHHHHHHHHHHHHHHc----CCc-----hHHHHHHHHHHH
Confidence            223443  67778999999999999999    987     334444444443

>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*

Probab=99.83  E-value=1.5e-19  Score=161.89  Aligned_cols=170  Identities=16%  Similarity=0.138  Sum_probs=145.0

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccce---eEEecCCHHhHHHHHHHHHH--h
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKL---AIFAAGDSAVVQWLTPLFEV--L   80 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l---~i~~gG~~~~~~~~~~~l~~--~   80 (220)
                      ++.+ +++|++||++||+.|.+++++.+.+.+.++  +.+|+++++..+..+.+   .+++||+++.++++.++|..  +
T Consensus       139 ~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~~v--~~sPe~~~~G~A~~~~l~p~rIvvG~~~~~~~~~~~ll~~~~~  215 (432)
T 3pid_A          139 DVTE-INPNAVMIIKSTIPVGFTRDIKERLGIDNV--IFSPEFLREGRALYDNLHPSRIVIGERSARAERFADLLKEGAI  215 (432)
T ss_dssp             HHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCCCE--EECCCCCCTTSHHHHHHSCSCEEESSCSHHHHHHHHHHHHHCS
T ss_pred             HHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhccE--eecCccCCcchhhhcccCCceEEecCCHHHHHHHHHHHHhhhc
Confidence            5677 889999999999999999999999987754  55999999999999998   89999999999999999987  5


Q ss_pred             cc--ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccC-CC--
Q 044696           81 GK--PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDF-RP--  155 (220)
Q Consensus        81 ~~--~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~-~~--  155 (220)
                      ..  .+++++++.|+.+||++|.+.+.+++.++|+..+|++.|+|+++++++++..+           ++-. .| .|  
T Consensus       216 ~~~~~v~~~~~~~AE~~Kl~~N~~~a~~Ia~~nEl~~lae~~GiD~~~v~~~~~~dp-----------rig~-~~~~pg~  283 (432)
T 3pid_A          216 KQDIPTLFTDSTEAEAIKLFANTYLALRVAYFNELDSYAESQGLNSKQIIEGVCLDP-----------RIGN-HYNNPSF  283 (432)
T ss_dssp             SSSCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST-----------TTCS-SSCCCCS
T ss_pred             cCCCeEEecCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHccCC-----------CCCc-ccCCCCC
Confidence            54  57789999999999999999999999999999999999999999999998643           2211 12 24  


Q ss_pred             CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696          156 GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA  196 (220)
Q Consensus       156 ~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~  196 (220)
                      +|.-.++-||....+  ++..    |++.++..++++..+.
T Consensus       284 G~GG~C~pkD~~~L~--~~~~----~~~~~li~~~~~~N~~  318 (432)
T 3pid_A          284 GYGGYCLPKDTKQLL--ANYE----SVPNNIIAAIVDANRT  318 (432)
T ss_dssp             CCCTTTHHHHHHHHH--HHTT----TSCCSHHHHHHHHHHH
T ss_pred             CCcccchhhhHHHHH--HHhc----CCchhHHHHHHHHHHh
Confidence            567788999998776  3446    8899999999876544

>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}

Probab=99.82  E-value=5.3e-20  Score=167.26  Aligned_cols=175  Identities=13%  Similarity=0.060  Sum_probs=144.7

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHh-cCCc-EEEecCCCChHHhhccc-----e---eEEecCCH-----HhH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARE-RDCW-AVDAPVSGGDIGARDGK-----L---AIFAAGDS-----AVV   70 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~-~G~~-~ldapV~g~~~~a~~g~-----l---~i~~gG~~-----~~~   70 (220)
                      ++.+++++|++||++||+.|.+++++.+.+.+ .++. ++|.+|..+|..++.|.     +   .+++||+.     +++
T Consensus       120 ~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~~~~~~~~~d~~v~~~Pe~~~~G~a~~~~~~~~~iviG~~~~~~~~~a~  199 (481)
T 2o3j_A          120 TIAQYAGGPKIVVEKSTVPVKAAESIGCILREAQKNNENLKFQVLSNPEFLAEGTAMKDLANPDRVLIGGESSPEGLQAV  199 (481)
T ss_dssp             HHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHTC----CCEEEEECCCCCCTTCHHHHHHSCSCEEEEECSSHHHHHHH
T ss_pred             HHHHhCCCCCEEEECCCCCCCHHHHHHHHHHHhhCcCcCCceEEEeCcccccccchhhcccCCCEEEEEecCchhhHHHH
Confidence            46678899999999999999999999999988 6632 45555555555555554     3   58889976     578


Q ss_pred             HHHHHHHHHhc-c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhh
Q 044696           71 QWLTPLFEVLG-K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERM  148 (220)
Q Consensus        71 ~~~~~~l~~~~-~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~  148 (220)
                      ++++++++.++ . ++++++++.+...|+++|.+...+++.+.|+..+|++.|+|+++++++++.++           ++
T Consensus       200 ~~l~~l~~~~~~~~~~~~~d~~~ae~~Kl~~N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~~~~~~-----------ri  268 (481)
T 2o3j_A          200 AELVRIYENWVPRNRIITTNTWSSELSKLVANAFLAQRISSINSISAVCEATGAEISEVAHAVGYDT-----------RI  268 (481)
T ss_dssp             HHHHHHHHTTSCGGGEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHTST-----------TT
T ss_pred             HHHHHHHHhhcCCCeEEecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHccCC-----------CC
Confidence            89999999998 3 88899999999999999999999999999999999999999999999998753           33


Q ss_pred             ccccCCCCc--hhhHHHHHHHHHHHHHhhcccCCCCC--ccHHHHHHHHHH
Q 044696          149 IEKDFRPGG--FAEYMVKDMGMGVDVVEESEDERVVV--LPGAALGKQLFS  195 (220)
Q Consensus       149 ~~~~~~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~--~p~~~~~~~~~~  195 (220)
                      ....|.|+|  ...++.||++++++.+++.    |++  +|+.+++.+.-+
T Consensus       269 ~~~~~~pg~g~gg~c~~KD~~~l~~~A~~~----g~~~~~~l~~~~~~~N~  315 (481)
T 2o3j_A          269 GSKFLQASVGFGGSCFQKDVLSLVYLCESL----NLPQVADYWQGVININN  315 (481)
T ss_dssp             CSSSCCCCSCCCSSSHHHHHHHHHHHHHHT----TCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCccCCccHHHHHHHHHHHHHHc----CCCccchHHHHHHHHHH
Confidence            334566754  7888999999999999999    999  999988866544

>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*

Probab=99.79  E-value=8.2e-19  Score=159.30  Aligned_cols=176  Identities=15%  Similarity=0.086  Sum_probs=151.4

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc---CCcE-EEecCCCChHHhhccce--------eEEecCC-H----H
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARER---DCWA-VDAPVSGGDIGARDGKL--------AIFAAGD-S----A   68 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~---G~~~-ldapV~g~~~~a~~g~l--------~i~~gG~-~----~   68 (220)
                      .+.+.+++|++||++||+.|.+++++.+.+.+.   | .| +|.+|..+|..++.|..        .+++|++ +    +
T Consensus       113 ~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~~~~~~g-~~~~~~~v~~~Pe~~~eG~~~~~~~~p~~iviG~~~~~~~~~  191 (478)
T 2y0c_A          113 NIGRYMTGFKVIVDKSTVPVGTAERVRAAVAEELAKR-GGDQMFSVVSNPEFLKEGAAVDDFTRPDRIVIGCDDDVPGER  191 (478)
T ss_dssp             HHHHHCCSCEEEEECSCCCTTHHHHHHHHHHHHHHHT-TCCCCEEEEECCCCCCTTCHHHHHHSCSCEEEECCSSHHHHH
T ss_pred             HHHHhcCCCCEEEEeCCcCCCchHHHHHHHHHHhcCC-CCCccEEEEEChhhhcccceeeccCCCCEEEEEECCCcccHH
Confidence            466778899999999999999999999888764   4 45 88899999999999987        6888887 5    6


Q ss_pred             hHHHHHHHHHHhc--c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhh
Q 044696           69 VVQWLTPLFEVLG--K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYG  145 (220)
Q Consensus        69 ~~~~~~~~l~~~~--~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~  145 (220)
                      ++++++++|+.+.  . ++++++++.+...|+++|.+...++..+.|+..++++.|+|++++.+.+..           .
T Consensus       192 ~~~~~~~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~la~~~Gid~~~v~~~i~~-----------~  260 (478)
T 2y0c_A          192 ARELMKKLYAPFNRNHERTLYMDVRSAEFTKYAANAMLATRISFMNELANLADRFGADIEAVRRGIGS-----------D  260 (478)
T ss_dssp             HHHHHHHHTGGGGSSSCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT-----------S
T ss_pred             HHHHHHHHHHHHhccCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhc-----------C
Confidence            8899999999887  3 788899999999999999999999999999999999999999999988863           2


Q ss_pred             hhhccccCCCCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          146 ERMIEKDFRPGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       146 ~~~~~~~~~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                      +++....|.|++  ...++.||...+.+.+++.    |+++|+.+++.++++..
T Consensus       261 ~rig~~~~~pG~g~gg~c~~kD~~~l~~~A~~~----gv~~pl~~~v~~in~~~  310 (478)
T 2y0c_A          261 PRIGYHFLYAGCGYGGSCFPKDVEALIRTADEH----GQSLQILKAVSSVNATQ  310 (478)
T ss_dssp             TTTCSTTCCCSSCCCSSSHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHH
T ss_pred             CccCcccCCCCcccccCcCHHHHHHHHHHHHHc----CCCcHHHHHHHHHHHHh
Confidence            344445566655  4456799999999999999    99999999999888754

>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*

Probab=99.74  E-value=5.7e-18  Score=152.01  Aligned_cols=175  Identities=15%  Similarity=0.019  Sum_probs=150.6

Q ss_pred             hhhcCCC---CCEEEecCCCCHHH-HHHHHHHHHhc-CCcE-EEecCCCChHHhhccce--------eEEecCC-HHhHH
Q 044696            7 IVSALNP---GAVYVDTTSSHPAL-AREIFKVARER-DCWA-VDAPVSGGDIGARDGKL--------AIFAAGD-SAVVQ   71 (220)
Q Consensus         7 i~~~~~~---g~~ivd~ST~~p~~-~~~la~~~~~~-G~~~-ldapV~g~~~~a~~g~l--------~i~~gG~-~~~~~   71 (220)
                      +.+.+++   +++||++||+.|.+ .+.+.+.+.+. |.++ +|.+|..+|..+..|..        .+++|++ +++.+
T Consensus       106 i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~~~g~~~~~~~~v~~~Pe~~~~G~~~~~~~~~~~iv~G~~~~~~~~  185 (436)
T 1mv8_A          106 IGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGD  185 (436)
T ss_dssp             HHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHH
T ss_pred             HHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHHhcCcccCCcEEEEECcccccccccchhccCCCEEEEEcCCHHHHH
Confidence            4556777   99999999999999 78888888775 7777 78899999998888887        7888887 88889


Q ss_pred             HHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhc-
Q 044696           72 WLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMI-  149 (220)
Q Consensus        72 ~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~-  149 (220)
                      +++++++.++. +++ ++++.+...|++.|.+....+..+.|+..++++.|+|++++.+.+...           +++. 
T Consensus       186 ~~~~l~~~~~~~v~~-~~~~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~-----------~r~~~  253 (436)
T 1mv8_A          186 LLEEIYRELDAPIIR-KTVEVAEMIKYTCNVWHAAKVTFANEIGNIAKAVGVDGREVMDVICQD-----------HKLNL  253 (436)
T ss_dssp             HHHHHHTTSSSCEEE-EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTC-----------TTTTT
T ss_pred             HHHHHHhccCCCEEc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCC-----------CCCCC
Confidence            99999999988 555 889999999999999999999999999999999999999999988752           2333 


Q ss_pred             -cccCCC--CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          150 -EKDFRP--GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       150 -~~~~~~--~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                       .+.|.|  +|...++.||...+.+.+++.    |+++|+.+++++..+..
T Consensus       254 ~~~~~~pg~g~gg~~~~kD~~~l~~~a~~~----g~~~pl~~~v~~in~~~  300 (436)
T 1mv8_A          254 SRYYMRPGFAFGGSCLPKDVRALTYRASQL----DVEHPMLGSLMRSNSNQ  300 (436)
T ss_dssp             SSTTCSCCSCCCSSSHHHHHHHHHHHHHHT----TCCCTTGGGHHHHHHHH
T ss_pred             cccCCCCcccccCcCcHhhHHHHHHHHHHc----CCCcHHHHHHHHHHhHh
Confidence             445566  578889999999999999999    99999999998876643

>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*

Probab=99.72  E-value=9.5e-17  Score=142.76  Aligned_cols=172  Identities=13%  Similarity=0.043  Sum_probs=139.5

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhcccee---EEecCCH-------HhHHHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA---IFAAGDS-------AVVQWLTP   75 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~---i~~gG~~-------~~~~~~~~   75 (220)
                      .+.+ +.+|++||++||+.|.+++++.+.+.+.  .++.+|....+..+..+.+.   +++||++       +..+++.+
T Consensus       103 ~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~~--~v~~~Pe~~~~G~a~~~~~~~~riviG~~~~~~~~~~~~~~~~~~  179 (402)
T 1dlj_A          103 EVLS-VNSHATLIIKSTIPIGFITEMRQKFQTD--RIIFSPEFLRESKALYDNLYPSRIIVSCEENDSPKVKADAEKFAL  179 (402)
T ss_dssp             HHHH-HCSSCEEEECSCCCTTHHHHHHHHTTCS--CEEECCCCCCTTSTTHHHHSCSCEEEECCTTSCHHHHHHHHHHHH
T ss_pred             HHHh-hCCCCEEEEeCCCCccHHHHHHHHhCCC--eEEECCccccCcchhhcccCCCEEEEeCCCcccchhHHHHHHHHH
Confidence            3556 7889999999999999999999887654  78899988777665544444   8899987       55666777


Q ss_pred             HHHH-hc--c-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccc
Q 044696           76 LFEV-LG--K-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEK  151 (220)
Q Consensus        76 ~l~~-~~--~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~  151 (220)
                      +|.. +.  . ++++++++.+...|+++|.+...+++.+.|+..+|++.|+|+++++++++..+           ++...
T Consensus       180 ~l~~~~~~~~~~~~~~di~~ae~~Kl~~N~~~a~~ia~~nE~~~l~~~~Gid~~~v~~~~~~~~-----------ri~~~  248 (402)
T 1dlj_A          180 LLKSAAKKNNVPVLIMGASEAEAVKLFANTYLALRVAYFNELDTYAESRKLNSHMIIQGISYDD-----------RIGMH  248 (402)
T ss_dssp             HHHHHCSCSCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST-----------TTCSS
T ss_pred             HHhhhhccCCceEEecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhccCC-----------CCCcC
Confidence            7764 43  2 57889999999999999999999999999999999999999999999998654           22222


Q ss_pred             cCCC--CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          152 DFRP--GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       152 ~~~~--~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                      .+.|  +|...++.||+.++++.+  .    |+++|+++++++..+..
T Consensus       249 ~~~pg~g~gg~c~~kD~~~l~~~a--~----~~~~~l~~~~~~~N~~~  290 (402)
T 1dlj_A          249 YNNPSFGYGGYSLPKDTKQLLANY--N----NIPQTLIEAIVSSNNVR  290 (402)
T ss_dssp             SCCCCSSCCSSHHHHHHHHHHHHH--T----TSSCSHHHHHHHHHHHH
T ss_pred             CCCCCCccCCccHHhhHHHHHHHh--c----CCChHHHHHHHHHHHHh
Confidence            3446  578889999999999887  4    77999999998776644

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=99.52  E-value=1.7e-13  Score=114.20  Aligned_cols=174  Identities=8%  Similarity=0.023  Sum_probs=135.6

Q ss_pred             hhhcCCCCCEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC--CHHhHHHHHHHHHHhccc
Q 044696            7 IVSALNPGAVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG--DSAVVQWLTPLFEVLGKP   83 (220)
Q Consensus         7 i~~~~~~g~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG--~~~~~~~~~~~l~~~~~~   83 (220)
                      ++..+.+|+++|++ ++++++.   +.+.+. ++.++++ ++.+.|.....|.+.++.|+  +++.+++++++|+.+|.+
T Consensus        76 v~~~l~~~~~vv~~~~~~~~~~---l~~~~~-~~~~~v~-~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll~~~G~~  150 (259)
T 2ahr_A           76 VLKPLHFKQPIISMAAGISLQR---LATFVG-QDLPLLR-IMPNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGST  150 (259)
T ss_dssp             HHTTSCCCSCEEECCTTCCHHH---HHHHHC-TTSCEEE-EECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTEEE
T ss_pred             HHHHhccCCEEEEeCCCCCHHH---HHHhcC-CCCCEEE-EcCCchHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCE
Confidence            34455689999999 5788765   334443 5678998 88888988888887788877  889999999999999988


Q ss_pred             eecCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChH-HHHhhh--hhhccc-cCCCCc
Q 044696           84 TFMGGAGCGQSCKIA--NQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSM-AMELYG--ERMIEK-DFRPGG  157 (220)
Q Consensus        84 ~~~G~~G~a~~~Kl~--~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~-~~~~~~--~~~~~~-~~~~~f  157 (220)
                      +++++......+|+.  .|.+....+.+++|+   +++.|+|++.+++++..+...++ ++..+.  |.++.+ .++|+|
T Consensus       151 ~~~~~~~~d~~~al~g~~~~~~~~~~~~la~~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~p~~  227 (259)
T 2ahr_A          151 FDISEKDFDTFTALAGSSPAYIYLFIEALAKA---GVKNGIPKAKALEIVTQTVLASASNLKTSSQSPHDFIDAICSPGG  227 (259)
T ss_dssp             EECCGGGHHHHHHHHTTHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHSSSCHHHHHHHHCCTTS
T ss_pred             EEecHHHccHHHHHhccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCCCCh
Confidence            889987888888885  344555566666666   78899999999999988766666 555454  776644 467899


Q ss_pred             hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHH
Q 044696          158 FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVA  199 (220)
Q Consensus       158 ~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~  199 (220)
                      ++....||++       +.    |++..+.+++.+.++++.+
T Consensus       228 ~~~~~~~~l~-------~~----g~~~~~~~a~~~~~~r~~~  258 (259)
T 2ahr_A          228 TTIAGLMELE-------RL----GLTATVSSAIDKTIDKAKS  258 (259)
T ss_dssp             HHHHHHHHHH-------HH----THHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHH-------HC----ChHHHHHHHHHHHHHHHhc
Confidence            9999999985       56    8888899999998888764

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=99.49  E-value=2.1e-13  Score=113.60  Aligned_cols=162  Identities=14%  Similarity=0.083  Sum_probs=127.6

Q ss_pred             CCEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC--CHHhHHHHHHHHHHhccceecC-C-
Q 044696           14 GAVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG--DSAVVQWLTPLFEVLGKPTFMG-G-   88 (220)
Q Consensus        14 g~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG--~~~~~~~~~~~l~~~~~~~~~G-~-   88 (220)
                      +++||++ |++++   +++.+.+. .+.+|+++ +.+.|..+..|.+.++.++  +++.+++++++|+.+|..++++ + 
T Consensus        81 ~~ivv~~~~g~~~---~~l~~~~~-~~~~~v~~-~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~  155 (263)
T 1yqg_A           81 GALVLSVAAGLSV---GTLSRYLG-GTRRIVRV-MPNTPGKIGLGVSGMYAEAEVSETDRRIADRIMKSVGLTVWLDDEE  155 (263)
T ss_dssp             TCEEEECCTTCCH---HHHHHHTT-SCCCEEEE-ECCGGGGGTCEEEEEECCTTSCHHHHHHHHHHHHTTEEEEECSSTT
T ss_pred             CCEEEEecCCCCH---HHHHHHcC-CCCcEEEE-cCCHHHHHcCceEEEEcCCCCCHHHHHHHHHHHHhCCCEEEeCChh
Confidence            8999999 88887   44555554 36789999 8888988888988888888  8899999999999999833888 6 


Q ss_pred             --------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChH-HHHhhh--h-hhccccCCCC
Q 044696           89 --------AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSM-AMELYG--E-RMIEKDFRPG  156 (220)
Q Consensus        89 --------~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~-~~~~~~--~-~~~~~~~~~~  156 (220)
                              .|++.       .+....+.++.|+   +++.|++++++.+++..+...++ ++....  | .+.++.++|+
T Consensus       156 ~~~~~~al~g~~~-------~~~~~~~~~l~e~---~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (263)
T 1yqg_A          156 KMHGITGISGSGP-------AYVFYLLDALQNA---AIRQGFDMAEARALSLATFKGAVALAEQTGEDFEKLQKNVTSKG  225 (263)
T ss_dssp             HHHHHHHHTTSHH-------HHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTCCTT
T ss_pred             hccHHHHHHccHH-------HHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCC
Confidence                    33332       2234555566666   88999999999999877655555 555554  5 6777888899


Q ss_pred             chhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCC
Q 044696          157 GFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG  201 (220)
Q Consensus       157 f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G  201 (220)
                      |++..+.||+       ++.    |++.|+.+++.+.|+++.+.|
T Consensus       226 ~~~~~~l~~l-------~~~----~~~~~~~~a~~~~~~~~~~~~  259 (263)
T 1yqg_A          226 GTTHEAVEAF-------RRH----RVAEAISEGVCACVRRSQEME  259 (263)
T ss_dssp             SHHHHHHHHH-------HHT----THHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHH-------HHC----CHHHHHHHHHHHHHHHHHHHH
Confidence            9998888887       557    999999999999999998765

>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}

Probab=99.48  E-value=3.4e-14  Score=120.76  Aligned_cols=187  Identities=12%  Similarity=0.010  Sum_probs=135.2

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc----CCcEEEecCCCC--hHHhhccceeEEe--cCCHHhHHHHHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARER----DCWAVDAPVSGG--DIGARDGKLAIFA--AGDSAVVQWLTPLF   77 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~----G~~~ldapV~g~--~~~a~~g~l~i~~--gG~~~~~~~~~~~l   77 (220)
                      .+.+.+.++++||++++.-+ ..+.+++.+.+.    |..+.++++++.  +.....|.+.+..  +++++.+++++++|
T Consensus        93 ~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~~~vi~g~~~~~~~~~~p~~~~~~~~g~~~i~~~~~~~~~~~~~~~~ll  171 (316)
T 2ew2_A           93 AIQPMITEKTYVLCLLNGLG-HEDVLEKYVPKENILVGITMWTAGLEGPGRVKLLGDGEIELENIDPSGKKFALEVVDVF  171 (316)
T ss_dssp             HHGGGCCTTCEEEECCSSSC-THHHHTTTSCGGGEEEEEECCCCEEEETTEEEECSCCCEEEEESSGGGHHHHHHHHHHH
T ss_pred             HHHHhcCCCCEEEEecCCCC-cHHHHHHHcCCccEEEEEeeeeeEEcCCCEEEEecCCcEEEeecCCCccHHHHHHHHHH
Confidence            35566788999999987433 445666666544    445566777763  3345567777653  66788899999999


Q ss_pred             HHhcc-ceecCCCCHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHcCCCH--HHHHHHHhc
Q 044696           78 EVLGK-PTFMGGAGCGQSCKIANQIVV---------------------GANLLGLSEGLVFADEAGLDV--RKWRDAVKG  133 (220)
Q Consensus        78 ~~~~~-~~~~G~~G~a~~~Kl~~n~~~---------------------~~~~~~~aEa~~la~~~Gl~~--~~~~~~l~~  133 (220)
                      +.++. +++.++.+.+...|++.|.++                     ..+..++.|++.++++.|+++  +.+.+.+..
T Consensus       172 ~~~g~~~~~~~d~~~~~~~Kl~~N~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~~~  251 (316)
T 2ew2_A          172 QKAGLNPSYSSNVRYSIWRKACVNGTLNGLCTILDCNIAEFGALPVSESLVKTLISEFAAVAEKEAIYLDQAEVYTHIVQ  251 (316)
T ss_dssp             HHTTCCEEECTTHHHHHHHHHHHHTTHHHHHHHHTCCHHHHHTSTTHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHH
T ss_pred             HhCCCCcEEchhHHHHHHHHHHHhhhHHHHHHHhCCcHHHHHhCHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHH
Confidence            99998 888888999999999999642                     456788999999999999997  467777764


Q ss_pred             cCCChHHHHhhhhhhccccC-CCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696          134 GAAGSMAMELYGERMIEKDF-RPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVAN  200 (220)
Q Consensus       134 ~~~~s~~~~~~~~~~~~~~~-~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~  200 (220)
                      ........+++ +.|. .|+ ..++..+ ..||+..+++.+++.    |+++|+.+.+.++++.....
T Consensus       252 ~~~~~~~~~~~-~sm~-~d~~~~g~~~E-~~~~~~~~~~~a~~~----gv~~P~~~~~~~~~~~~~~~  312 (316)
T 2ew2_A          252 TYDPNGIGLHY-PSMY-QDLIKNHRLTE-IDYINGAVWRKGQKY----NVATPFCAMLTQLVHGKEEL  312 (316)
T ss_dssp             TTCTTTTTTSC-CHHH-HHHTTTCCCCS-GGGTHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHH
T ss_pred             HhccccCCCCC-cHHH-HHHHHcCCcch-HHHHhhHHHHHHHHh----CCCCCHHHHHHHHHHHHHhh
Confidence            22111001111 2222 344 4555555 689999999999999    99999999999999876543

>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*

Probab=99.45  E-value=3e-14  Score=119.91  Aligned_cols=178  Identities=11%  Similarity=0.031  Sum_probs=126.9

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHh--cCCcEEEecCCCC-hHHhhccceeEEe-cCCHHhHHHHHHHHHHhc
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARE--RDCWAVDAPVSGG-DIGARDGKLAIFA-AGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~--~G~~~ldapV~g~-~~~a~~g~l~i~~-gG~~~~~~~~~~~l~~~~   81 (220)
                      .+.+.+.++++||++++ .+...+.+.+.+.+  .|..|..+.+.++ +..+..|.+.+.. +++++.+++++++|+.++
T Consensus        82 ~l~~~l~~~~~vv~~~~-g~~~~~~l~~~~~~~~~g~~~~~~~~~~p~~~~~~~g~~~i~~~~~~~~~~~~~~~ll~~~g  160 (291)
T 1ks9_A           82 SLASTLPVTTPILLIHN-GMGTIEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL  160 (291)
T ss_dssp             HHHTTSCTTSCEEEECS-SSCTTGGGTTCCSCEEEEEECCEEEEETTEEEEEECCCEEEEESSGGGTTCTHHHHHHHTTS
T ss_pred             HHHhhCCCCCEEEEecC-CCCcHHHHHHhcCCeEEEEEeEccEEcCCEEEEecccceEEccCCCCcchHHHHHHHHHhcC
Confidence            35566788999999865 44444555555543  3444323333333 5566778877765 566778899999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHcCCCH--HHH----HHHHhccC-
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVV------------------GANLLGLSEGLVFADEAGLDV--RKW----RDAVKGGA-  135 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~------------------~~~~~~~aEa~~la~~~Gl~~--~~~----~~~l~~~~-  135 (220)
                      . +++.++.+.+...|+++|..+                  .....++.|++.++++.|+++  +.+    .+++..+. 
T Consensus       161 ~~~~~~~~~~~~~~~Kl~~n~~~n~~tal~~~~~g~~~~~~~~~~~~~~E~~~va~a~G~~~~~~~~~~~~~~~~~~~~~  240 (291)
T 1ks9_A          161 PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIEREGHHTSAEDLRDYVMQVIDATAE  240 (291)
T ss_dssp             SCEEECTTHHHHHHHHHHHHHHHHHHHHHTTCCGGGGGGCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHTTT
T ss_pred             CCCeecHHHHHHHHHHHeeeeeecHHHHHHCCCchHHHhHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhcCCC
Confidence            9 889999999999999999888                  678899999999999999987  454    44444322 


Q ss_pred             CChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHH
Q 044696          136 AGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMV  198 (220)
Q Consensus       136 ~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~  198 (220)
                      ..|.+++.         +..++..+.. ++..++++.+++.    |+|+|+.+.+.++++...
T Consensus       241 ~~ssm~~d---------~~~g~~~e~~-~~~g~~~~~a~~~----gv~~P~~~~~~~~~~~~e  289 (291)
T 1ks9_A          241 NISSMLQD---------IRALRHTEID-YINGFLLRRARAH----GIAVPENTRLFEMVKRKE  289 (291)
T ss_dssp             CCCHHHHH---------HHTTCCCSGG-GTHHHHHHHHHHH----TCCCHHHHHHHHHHHHHH
T ss_pred             CCChHHHH---------HHcCCccHHH-HHHHHHHHHHHHh----CCCCCHHHHHHHHHHHHh
Confidence            33333322         2222222222 5688999999999    999999999999988653

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=99.45  E-value=1.2e-14  Score=120.67  Aligned_cols=94  Identities=15%  Similarity=0.227  Sum_probs=85.0

Q ss_pred             CCCEEEecC-----------CCCHHHHHHHHHHHHh--------cCCcEEEecCCCChHHhhccceeEEecCC-HHhHHH
Q 044696           13 PGAVYVDTT-----------SSHPALAREIFKVARE--------RDCWAVDAPVSGGDIGARDGKLAIFAAGD-SAVVQW   72 (220)
Q Consensus        13 ~g~~ivd~S-----------T~~p~~~~~la~~~~~--------~G~~~ldapV~g~~~~a~~g~l~i~~gG~-~~~~~~   72 (220)
                      +|++|||+|           |++|++.+.+++.+++        +|..|+|+||++++..++.+++.++++|+ ++++++
T Consensus       116 ~g~ivi~~s~~~~~~~G~~~t~~~~~~~~~~~~l~~~l~~~~vv~~~~~~~a~v~~~~~~a~~g~~~~~v~g~d~~~~~~  195 (245)
T 3dtt_A          116 AGKILVDIANPLDFSHGMPPTLNPVNTDSLGEQIQRTFPEAKVVKTLNTMNASLMVDPGRAAGGDHSVFVSGNDAAAKAE  195 (245)
T ss_dssp             TTSEEEECCCCEECTTCSSCEESSCSSCCHHHHHHHHSTTSEEEECSTTSCHHHHHCGGGTGGGCCCEEEECSCHHHHHH
T ss_pred             CCCEEEECCCCCCCcCCccccccCCCCccHHHHHHHHCCCCeEEEeecccCHHHhcCccccCCCCeeEEEECCCHHHHHH
Confidence            899999999           8899888888887777        38999999999999999999999998775 889999


Q ss_pred             HHHHHHHhcc--ceecCCCCHHHHHHHHHHHHHHHH
Q 044696           73 LTPLFEVLGK--PTFMGGAGCGQSCKIANQIVVGAN  106 (220)
Q Consensus        73 ~~~~l~~~~~--~~~~G~~G~a~~~Kl~~n~~~~~~  106 (220)
                      ++++|+.++.  ++|+|+.|+|+.+|+++|++...+
T Consensus       196 v~~ll~~~g~~~~~~~G~~g~a~~~k~~~~~~~~l~  231 (245)
T 3dtt_A          196 VATLLKSLGHQDVIDLGDITTARGAEMLLPVWIRLW  231 (245)
T ss_dssp             HHHHHHHTTCCCEEEEESGGGHHHHHTTHHHHHHHH
T ss_pred             HHHHHHHcCCCceeccCcHHHHHHhhhhHHHHHHHH
Confidence            9999999995  699999999999999999998655

>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}

Probab=99.31  E-value=1.3e-11  Score=110.62  Aligned_cols=170  Identities=15%  Similarity=0.088  Sum_probs=128.3

Q ss_pred             CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccce--------eEEecC-CHHhHHHHHHHHHHhcc
Q 044696           12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKL--------AIFAAG-DSAVVQWLTPLFEVLGK   82 (220)
Q Consensus        12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l--------~i~~gG-~~~~~~~~~~~l~~~~~   82 (220)
                      .+|++||..||+.|.+++++...+-++...-+|-.|.-+|.-...|+.        -+++|+ ++.+.+.++.+++.+..
T Consensus       135 ~~g~lVV~eSTVppGtte~~~~~~l~~~~~~~~f~v~~~PErl~eG~a~~d~~~~~riViG~~~~~a~~~~~~ly~~~~~  214 (444)
T 3vtf_A          135 GRWHLVVVKSTVPPGTTEGLVARAVAEEAGGVKFSVASNPEFLREGSALEDFFKPDRIVIGAGDERAASFLLDVYKAVDA  214 (444)
T ss_dssp             CSCCEEEECSCCCTTTTTTHHHHHHHTTTTTCCCEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHHTTTSCS
T ss_pred             CCCeEEEEeCCCCCchHHHHHHHHHHHhCCCCCceeecCcccccCCccccccccCCcEEEcCCCHHHHHHHHHHHhccCC
Confidence            368999999999999999876554333222334445445544444432        245565 56677888999988877


Q ss_pred             -ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCC--Cchh
Q 044696           83 -PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRP--GGFA  159 (220)
Q Consensus        83 -~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~--~f~~  159 (220)
                       ++ +..+..|...|++.|.+...+++.+.|...+|++.|+|..++++.+....           ++-..-+.|  +|.-
T Consensus       215 ~~~-~~~~~~AE~~Kl~eN~~ravnIa~~NEla~ice~~GiDv~eV~~a~~~d~-----------rig~~~l~PG~G~GG  282 (444)
T 3vtf_A          215 PKL-VMKPREAELVKYASNVFLALKISFANEVGLLAKRLGVDTYRVFEAVGLDK-----------RIGRHYFGAGLGFGG  282 (444)
T ss_dssp             CEE-EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTST-----------TSCSTTCCCSSCCCT
T ss_pred             CEE-EechhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhccCC-----------CCCCCCCCCCCCCCC
Confidence             54 45667899999999999999999999999999999999999999987532           111111233  5677


Q ss_pred             hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          160 EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       160 ~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                      .++-||.......+++.    |++.++..++++.-+..
T Consensus       283 ~CipkD~~~L~~~a~~~----g~~~~li~a~~~iN~~~  316 (444)
T 3vtf_A          283 SCFPKDTLAFIRFGESL----GLEMAISKAVLRVNEYM  316 (444)
T ss_dssp             TTHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHHHH
T ss_pred             cccCcCHHHHHHHHHhc----CCCHHHHHhhHHHHHHH
Confidence            88999999999999999    99999999988776543

>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}

Probab=99.31  E-value=8.6e-13  Score=114.09  Aligned_cols=187  Identities=10%  Similarity=-0.007  Sum_probs=124.8

Q ss_pred             CCCEEEecC-CCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhh---ccceeEEecCCHHhHHHHHHHHHHhcc-ceecC
Q 044696           13 PGAVYVDTT-SSHPALAREIFKVARERDCWAVDAPVSGGDIGAR---DGKLAIFAAGDSAVVQWLTPLFEVLGK-PTFMG   87 (220)
Q Consensus        13 ~g~~ivd~S-T~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~---~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~~G   87 (220)
                      +++++|+++ +++|++.+.+++.+.+...  .++++.++|..+.   .|.+..++.|..+ +++++++|+..+. +++.+
T Consensus       103 ~~~~vv~~~nGi~~~~~~~l~~~~~~~~~--~~~~~~~~P~~~~~~~~g~~~~~~~g~~~-~~~~~~ll~~~g~~~~~~~  179 (335)
T 1z82_A          103 KPSMVLNLSKGIEIKTGKRVSEIVEEILG--CPYAVLSGPSHAEEVAKKLPTAVTLAGEN-SKELQKRISTEYFRVYTCE  179 (335)
T ss_dssp             CCSEEEECCCCCCTTTCCCHHHHHHHHTC--CCEEEEESSCCHHHHHTTCCEEEEEEETT-HHHHHHHHCCSSEEEEEES
T ss_pred             CCCEEEEEeCCCCCCccCcHHHHHHHHcC--CceEEEECCccHHHHhCCCceEEEEEehh-HHHHHHHhCCCCEEEEecC
Confidence            789999999 6788777778877766432  4566666665443   6765444433333 7899999998887 76666


Q ss_pred             CC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC----CChHHHHh--h
Q 044696           88 GA-----------------GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA----AGSMAMEL--Y  144 (220)
Q Consensus        88 ~~-----------------G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~----~~s~~~~~--~  144 (220)
                      +.                 |..+.+|+.+|.+......++.|++.++++.|++++++.++...+.    ..++..++  .
T Consensus       180 di~~~~~~k~l~N~~~~~~g~~~g~~~~~n~~~a~~~~~~~E~~~la~a~G~~~~~~~~l~~~~~~~~t~~s~~~~n~~~  259 (335)
T 1z82_A          180 DVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRF  259 (335)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHHCTTCHHHHH
T ss_pred             chHHHHHHHHHHhHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHhCCChhhhcccccccceeeeccCccCcHHHH
Confidence            52                 2223445667888888899999999999999999988765321000    00111111  1


Q ss_pred             hhhhccccCCC------CchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHH
Q 044696          145 GERMIEKDFRP------GGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVI  214 (220)
Q Consensus       145 ~~~~~~~~~~~------~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~  214 (220)
                      .+.+.++ +++      .++.....||++.+++.+++.    |+++|+.+.+.++++       .+.+...+++.+
T Consensus       260 ~~~~~~g-~~~~~~~~~~g~~~e~~~~~~~v~~~a~~~----gv~~P~~~~v~~~~~-------~~~~~~~~~~~l  323 (335)
T 1z82_A          260 GELIARG-FNPLKLLESSNQVVEGAFTVKAVMKIAKEN----KIDMPISEEVYRVVY-------EGKPPLQSMRDL  323 (335)
T ss_dssp             HHHHHHT-CCHHHHHHTCSSCCTHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHH-------SCCCHHHHHHHH
T ss_pred             HHHHhCC-CCHHHHHHhcCCeeeHHHHHHHHHHHHHHh----CCCCcHHHHHHHHHh-------CCCCHHHHHHHH
Confidence            2333332 211      133345679999999999999    999999999998874       345666666554

>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6

Probab=99.29  E-value=4.9e-12  Score=108.64  Aligned_cols=176  Identities=10%  Similarity=-0.095  Sum_probs=121.4

Q ss_pred             hhhcCCCCCEEEecC-CC---CHHHHHHHHHHHHhc-CCcEEEecCCCChHHhh---ccc--eeEEecCCHHhHHHHHHH
Q 044696            7 IVSALNPGAVYVDTT-SS---HPALAREIFKVARER-DCWAVDAPVSGGDIGAR---DGK--LAIFAAGDSAVVQWLTPL   76 (220)
Q Consensus         7 i~~~~~~g~~ivd~S-T~---~p~~~~~la~~~~~~-G~~~ldapV~g~~~~a~---~g~--l~i~~gG~~~~~~~~~~~   76 (220)
                      +.+ +.++++||+++ ++   .|...+.+++.+.+. |..+ +.++..+|..+.   .|.  ..++.+++++.+++++++
T Consensus        91 i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~~~g~~~-~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l  168 (335)
T 1txg_A           91 ILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRLKHDLRE-RTVAITGPAIAREVAKRMPTTVVFSSPSESSANKMKEI  168 (335)
T ss_dssp             HTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTTSTTCGG-GEEEEESSCCHHHHHTTCCEEEEEECSCHHHHHHHHHH
T ss_pred             Hhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHHhcCCCC-cEEEEECCCcHHHHHccCCcEEEEEeCCHHHHHHHHHH
Confidence            455 77899999998 55   566667777777663 5423 444444443332   233  344455578889999999


Q ss_pred             HHHhcc-ceecCCC-----------------CHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-----
Q 044696           77 FEVLGK-PTFMGGA-----------------GCGQSCKIA-----NQIVVGANLLGLSEGLVFADEAGLDVRKWR-----  128 (220)
Q Consensus        77 l~~~~~-~~~~G~~-----------------G~a~~~Kl~-----~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~-----  128 (220)
                      |+..+. +++.++.                 |....+|+.     +|.+...+..++.|++.++++.|+++++++     
T Consensus       169 l~~~g~~~~~~~di~~~~~~k~~~N~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~E~~~la~~~G~~~~~~~~~~~~  248 (335)
T 1txg_A          169 FETEYFGVEVTTDIIGTEITSALKNVYSIAIAWIRGYESRKNVEMSNAKGVIATRAINEMAELIEILGGDRETAFGLSGF  248 (335)
T ss_dssp             HCBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSTTTH
T ss_pred             hCCCcEEEEecCchHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCcchhhcccch
Confidence            999888 7777775                 334446877     888888889999999999999999998765     


Q ss_pred             -HHHhccCCChHHHHhhhhhhccccCCCCchh--------------hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHH
Q 044696          129 -DAVKGGAAGSMAMELYGERMIEKDFRPGGFA--------------EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQL  193 (220)
Q Consensus       129 -~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~--------------~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~  193 (220)
                       +.+..+.. +...  +...    +|.++|++              ....||+.++++.+++.    |+|+|+.+.+.++
T Consensus       249 ~~~~~~~~~-~~~~--~~~~----~~~~~~s~~~d~~~~~~~~~~~~E~~~~~~~~~~~a~~~----gv~~P~~~~~~~~  317 (335)
T 1txg_A          249 GDLIATFRG-GRNG--MLGE----LLGKGLSIDEAMEELERRGVGVVEGYKTAEKAYRLSSKI----NADTKLLDSIYRV  317 (335)
T ss_dssp             HHHHHTTTC-HHHH--HHHH----HHHTTCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHT----TCCCHHHHHHHHH
T ss_pred             hheeecccc-CccH--HHHH----HHhCCCCHHHHHHHhccCCceecchHHHHHHHHHHHHHc----CCCCcHHHHHHHH
Confidence             55554332 2111  0111    12222322              23359999999999999    9999999999888


Q ss_pred             HH
Q 044696          194 FS  195 (220)
Q Consensus       194 ~~  195 (220)
                      ++
T Consensus       318 ~~  319 (335)
T 1txg_A          318 LY  319 (335)
T ss_dssp             HH
T ss_pred             Hh
Confidence            76

>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*

Probab=99.29  E-value=1.4e-12  Score=113.92  Aligned_cols=185  Identities=11%  Similarity=-0.026  Sum_probs=122.2

Q ss_pred             cchhhcCCC-CCEEEecC-CCCHHHHHHHHHHHHhc-CCcEEEecCCCChHHh---hcc--ceeEEecCCHHhHHHHHHH
Q 044696            5 DGIVSALNP-GAVYVDTT-SSHPALAREIFKVARER-DCWAVDAPVSGGDIGA---RDG--KLAIFAAGDSAVVQWLTPL   76 (220)
Q Consensus         5 ~gi~~~~~~-g~~ivd~S-T~~p~~~~~la~~~~~~-G~~~ldapV~g~~~~a---~~g--~l~i~~gG~~~~~~~~~~~   76 (220)
                      +|+.+.+.+ +++||+++ +++|++.+.+++.+.+. |.+  +.++..+|..+   ..+  .+.++.+++++.+++++++
T Consensus       107 ~gl~~~l~~~~~ivv~~~~gi~~~~~~~~~~~l~~~~~~~--~~~v~~gp~~~~~~~~g~~~~~~~~~~~~~~~~~v~~l  184 (366)
T 1evy_A          107 GNLIAYAKEKQVPVLVCTKGIERSTLKFPAEIIGEFLPSP--LLSVLAGPSFAIEVATGVFTCVSIASADINVARRLQRI  184 (366)
T ss_dssp             HHHHHHHHHHTCCEEECCCSCCTTTCCCHHHHHTTTSCGG--GEEEEESSCCHHHHHTTCCEEEEEECSSHHHHHHHHHH
T ss_pred             HHHHHhcCccCCEEEEECCcCCCccccCHHHHHHHHCCCC--cEEEEeCCChHHHHHhCCceEEEEecCCHHHHHHHHHH
Confidence            467777777 99999998 78887777777777654 432  23333333322   233  4556667788899999999


Q ss_pred             HHHh--cc-ceecCCC---CHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC-
Q 044696           77 FEVL--GK-PTFMGGA---GCGQS--------------CKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA-  135 (220)
Q Consensus        77 l~~~--~~-~~~~G~~---G~a~~--------------~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~-  135 (220)
                      |+.+  +. +++.++.   .-+..              +|+.+|.+......++.|++.++++.|++++++.++...+. 
T Consensus       185 l~~~g~g~~~~~~~di~~~~~~k~~~n~~~~~~~~~~~~~~~~n~~~~~~~~~~~E~~~la~a~Gi~~~~~~~~~~~~~~  264 (366)
T 1evy_A          185 MSTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALIMRGLLEIRDLTAALGGDGSAVFGLAGLGDL  264 (366)
T ss_dssp             HSCTTSSEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCCTTTTSTTTHHHH
T ss_pred             hcCCCCeEEEEEcCCchHHHHHHHHHhHHHHHHHHHhhccCCccHHHHHHHHHHHHHHHHHHHhCCCCccccccccchhh
Confidence            9998  66 6666663   23333              34557888888999999999999999999877654311000 


Q ss_pred             ---CChHHHHhh--hhhhcccc-CC----CCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHH
Q 044696          136 ---AGSMAMELY--GERMIEKD-FR----PGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFS  195 (220)
Q Consensus       136 ---~~s~~~~~~--~~~~~~~~-~~----~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~  195 (220)
                         ..++..+++  .+.+.++. +.    ..++.....||++.+++.+++.    |+++|+.+.+.++++
T Consensus       265 ~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~v~~~a~~~----gv~~P~~~~v~~~~~  330 (366)
T 1evy_A          265 QLTCSSELSRNFTVGKKLGKGLPIEEIQRTSKAVAEGVATADPLMRLAKQL----KVKMPLCHQIYEIVY  330 (366)
T ss_dssp             HHHHTCTTSHHHHHHHHHHTTCCHHHHHC---CCCHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHH
T ss_pred             eeeecCCCCchHHHHHHHhCCCCHHHHHHHcCCeeehHHHHHHHHHHHHHh----CCCCcHHHHHHHHHH
Confidence               001111211  22333321 11    0123345679999999999999    999999999988876

>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}

Probab=99.26  E-value=1.5e-12  Score=111.02  Aligned_cols=179  Identities=17%  Similarity=0.034  Sum_probs=117.9

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHh----cCCcEEEecCCCC--hHHhhccceeEE----ecCCHHhHHHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARE----RDCWAVDAPVSGG--DIGARDGKLAIF----AAGDSAVVQWLTPL   76 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~----~G~~~ldapV~g~--~~~a~~g~l~i~----~gG~~~~~~~~~~~   76 (220)
                      +.+.+.++++||++++. +...+.+.+.+.+    +|..++++++++.  ...+..|++.++    -+++.+.+ ++.++
T Consensus       103 i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~~~~v~~g~~~~~a~~~~pg~~~~~~~g~~~~ig~~~~~~~~~~~-~~~~l  180 (317)
T 2qyt_A          103 IRPMIGQNTKILPLLNG-ADIAERMRTYLPDTVVWKGCVYISARKSAPGLITLEADRELFYFGSGLPEQTDDEV-RLAEL  180 (317)
T ss_dssp             HGGGEEEEEEEEECSCS-SSHHHHHTTTSCTTTBCEEEEEEEEEEEETTEEEEEEEEEEEEEECCSSSCCHHHH-HHHHH
T ss_pred             HHhhcCCCCEEEEccCC-CCcHHHHHHHCCCCcEEEEEEEEEEEEcCCCEEEEcCCCceEEEcCCCCCCcCHHH-HHHHH
Confidence            44556678899998664 5555666666654    5677899999852  334455554433    22346777 89999


Q ss_pred             HHHhcc-ceecCCCCHHHHHHHHHHHHHH-------------------HHHHHHHHHHHHHHHcCCCHH--HHHHHHhcc
Q 044696           77 FEVLGK-PTFMGGAGCGQSCKIANQIVVG-------------------ANLLGLSEGLVFADEAGLDVR--KWRDAVKGG  134 (220)
Q Consensus        77 l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~-------------------~~~~~~aEa~~la~~~Gl~~~--~~~~~l~~~  134 (220)
                      |+..+. +++.++++.+...|++.|.++.                   .+..++.|++.++++.|++++  .+.+.+...
T Consensus       181 l~~~g~~~~~~~di~~~~~~Kl~~N~~~~~~~al~g~~~g~~~~~~~~~~~~~~~E~~~v~~a~G~~~~~~~~~~~~~~~  260 (317)
T 2qyt_A          181 LTAAGIRAYNPTDIDWYIMKKFMMISVTATATAYFDKPIGSILTEHEPELLSLLEEVAELFRAKYGQVPDDVVQQLLDKQ  260 (317)
T ss_dssp             HHHTTCCEECCSCHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHCHHHHHHHHHHHHHHHHHHTSCCCSSHHHHHHHHH
T ss_pred             HHHCCCCCEEchHHHHHHHHHHHHHHhhHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHH
Confidence            999998 8888999999999999998764                   345899999999999999974  667776542


Q ss_pred             CCChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696          135 AAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA  196 (220)
Q Consensus       135 ~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~  196 (220)
                      .   .......+.|. .|+..++..+.. ..+..+++.+++.    |+++|+.+.+.++++.
T Consensus       261 ~---~~~~~~~~sm~-~d~~~g~~~E~~-~~~g~~~~~a~~~----gv~~P~~~~~~~~~~~  313 (317)
T 2qyt_A          261 R---KMPPESTSSMH-SDFLQGGSTEVE-TLTGYVVREAEAL----RVDLPMYKRMYRELVS  313 (317)
T ss_dssp             H---HC---------------------C-TTTHHHHHHHHHT----TCCCHHHHHHHHTTCC
T ss_pred             h---ccCCCCCChHH-HHHHcCCccCHH-HHhhHHHHHHHHc----CCCCCHHHHHHHHHHH
Confidence            1   11122233344 255544432211 1278999999999    9999999999887653

>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}

Probab=99.24  E-value=6.9e-12  Score=107.00  Aligned_cols=112  Identities=20%  Similarity=0.150  Sum_probs=88.3

Q ss_pred             hhcCCCCCEEE-ecCCCCHHHHHHHH-HHHHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhcc
Q 044696            8 VSALNPGAVYV-DTTSSHPALAREIF-KVARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGK   82 (220)
Q Consensus         8 ~~~~~~g~~iv-d~ST~~p~~~~~la-~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~   82 (220)
                      +..+ ++++++ |+||++|+...+.. ...+..|.+|+| |+.++       .+..++.|   +++++++++++++.+|+
T Consensus        95 l~~~-~~~IlasntSti~~~~~a~~~~~~~r~~G~Hf~~-Pv~~~-------~lveiv~g~~t~~~~~~~~~~l~~~lGk  165 (293)
T 1zej_A           95 VERL-TNAPLCSNTSVISVDDIAERLDSPSRFLGVHWMN-PPHVM-------PLVEIVISRFTDSKTVAFVEGFLRELGK  165 (293)
T ss_dssp             HHTT-CCSCEEECCSSSCHHHHHTTSSCGGGEEEEEECS-STTTC-------CEEEEEECTTCCHHHHHHHHHHHHHTTC
T ss_pred             HhcC-CCCEEEEECCCcCHHHHHHHhhcccceEeEEecC-ccccC-------CEEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence            3445 898884 89999998665432 233356999999 77553       46656655   89999999999999999


Q ss_pred             -ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChH
Q 044696           83 -PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSM  139 (220)
Q Consensus        83 -~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~  139 (220)
                       ++++|+.      |++||++.    ..+.|++.++++ |+|++++.++++.+.+.++
T Consensus       166 ~~v~v~d~------fi~Nrll~----~~~~EA~~l~~~-Gv~~e~id~~~~~g~g~~~  212 (293)
T 1zej_A          166 EVVVCKGQ------SLVNRFNA----AVLSEASRMIEE-GVRAEDVDRVWKHHLGLLY  212 (293)
T ss_dssp             EEEEEESS------CHHHHHHH----HHHHHHHHHHHH-TCCHHHHHHHHHTTHHHHH
T ss_pred             eEEEeccc------ccHHHHHH----HHHHHHHHHHHh-CCCHHHHHHHHHhcCCCCC
Confidence             9999975      88998876    479999999999 9999999999987654443

>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*

Probab=99.19  E-value=1.3e-10  Score=99.99  Aligned_cols=186  Identities=13%  Similarity=0.052  Sum_probs=120.6

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc--CCcEEEecCCCChHHhhccceeEEecCC---HHhHHHHHHHHHHh
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARER--DCWAVDAPVSGGDIGARDGKLAIFAAGD---SAVVQWLTPLFEVL   80 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~--G~~~ldapV~g~~~~a~~g~l~i~~gG~---~~~~~~~~~~l~~~   80 (220)
                      ++.+.+.++++||++++..+.  .++++++.+.  +.+++-+ +...|.....|. .++++|+   ++.+++++++|+.+
T Consensus       103 ~l~~~l~~~~ivvs~s~gi~~--~~l~~~l~~~~~~~~vv~~-~p~~p~~~~~g~-~v~~~g~~~~~~~~~~v~~ll~~~  178 (322)
T 2izz_A          103 EIGADIEDRHIVVSCAAGVTI--SSIEKKLSAFRPAPRVIRC-MTNTPVVVREGA-TVYATGTHAQVEDGRLMEQLLSSV  178 (322)
T ss_dssp             HHGGGCCTTCEEEECCTTCCH--HHHHHHHHTTSSCCEEEEE-ECCGGGGGTCEE-EEEEECTTCCHHHHHHHHHHHHTT
T ss_pred             HHHhhcCCCCEEEEeCCCCCH--HHHHHHHhhcCCCCeEEEE-eCCcHHHHcCCe-EEEEeCCCCCHHHHHHHHHHHHhC
Confidence            355567789999999765442  2466666653  3444444 445555566665 7888888   78899999999999


Q ss_pred             ccceecCCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChH-HHHh--hhhhhccccC-C
Q 044696           81 GKPTFMGGAGCGQSCKIA--NQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSM-AMEL--YGERMIEKDF-R  154 (220)
Q Consensus        81 ~~~~~~G~~G~a~~~Kl~--~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~-~~~~--~~~~~~~~~~-~  154 (220)
                      |..+++.+........+.  .|.+++..+.+++|+   +++.|+|++.+++++..+...++ ++..  ..|.++.+.+ +
T Consensus       179 G~~~~~~e~~~~~~~a~~g~gpa~~~~~~eala~a---~~~~Gl~~~~a~~l~~~~~~g~~~~~~~~~~~p~~l~~~v~s  255 (322)
T 2izz_A          179 GFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADG---GVKMGLPRRLAVRLGAQALLGAAKMLLHSEQHPGQLKDNVSS  255 (322)
T ss_dssp             EEEEECCGGGHHHHHHHTTTHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHCC
T ss_pred             CCEEEeCHHHHHHHHHHhcCHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhCCC
Confidence            983345553334444443  344444445555554   58899999999999987665554 3332  2455554443 6


Q ss_pred             CCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHH
Q 044696          155 PGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQG  209 (220)
Q Consensus       155 ~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~a  209 (220)
                      |++++..       .++.+++.    |++.++.+++.+.|+++.+.|.+++..+.
T Consensus       256 p~g~t~~-------~l~~l~~~----g~~~~~~~av~~~~~ra~e~~~~~~~~~~  299 (322)
T 2izz_A          256 PGGATIH-------ALHVLESG----GFRSLLINAVEASCIRTRELQSMADQEQV  299 (322)
T ss_dssp             TTSHHHH-------HHHHHHHT----THHHHHHHHHHHHHHHHHHHHHC------
T ss_pred             CCcHHHH-------HHHHHHHC----CHHHHHHHHHHHHHHHHHHHhhccccccc
Confidence            6665443       33456778    99999999999999999998876544433

>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}

Probab=99.18  E-value=6.6e-11  Score=103.49  Aligned_cols=194  Identities=11%  Similarity=0.010  Sum_probs=137.0

Q ss_pred             chhhcCCCCCEEEecCC-CCHHHHHHHHHHHHh----cCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696            6 GIVSALNPGAVYVDTTS-SHPALAREIFKVARE----RDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVL   80 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST-~~p~~~~~la~~~~~----~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~   80 (220)
                      .+.+.++++++||++++ +.|++ +.+.+.+++    ..+.++.+|........+..+..++.+.+++..++++++|+..
T Consensus       118 ~i~~~l~~~~ivvs~~kGi~~~t-~~~se~i~~~l~~~~~~vlsgP~~a~ev~~g~pt~~via~~~~~~~~~v~~lf~~~  196 (356)
T 3k96_A          118 RMKPLIDAKTRIAWGTKGLAKGS-RLLHEVVATELGQVPMAVISGPSLATEVAANLPTAVSLASNNSQFSKDLIERLHGQ  196 (356)
T ss_dssp             HHGGGCCTTCEEEECCCSCBTTT-BCHHHHHHHHHCSCCEEEEESSCCHHHHHTTCCEEEEEEESCHHHHHHHHHHHCCS
T ss_pred             HHHHhcCCCCEEEEEeCCCCcCc-cCHHHHHHHHcCCCCEEEEECccHHHHHHcCCCeEEEEecCCHHHHHHHHHHhCCC
Confidence            35567788999999877 66665 544444443    4567889998877666666677778888999999999999987


Q ss_pred             cc-ceecCCC-----------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH------HhccCC
Q 044696           81 GK-PTFMGGA-----------------GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDA------VKGGAA  136 (220)
Q Consensus        81 ~~-~~~~G~~-----------------G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~------l~~~~~  136 (220)
                      +- +++..++                 |.+..+|+.+|...+....++.|+..++++.|.+++++++.      +.... 
T Consensus       197 ~~rv~~~~Di~g~e~~galkNviaia~G~~~gl~~g~N~~aal~~~~l~E~~~l~~a~G~~~~t~~gl~g~gDl~~tc~-  275 (356)
T 3k96_A          197 RFRVYKNDDMIGVELCGSVKNILAIATGISDGLKLGSNARAALITRGLTEMGRLVSVFGGKQETLTGLAGLGDLVLTCT-  275 (356)
T ss_dssp             SEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCCHHHHTSTTTHHHHHHHHH-
T ss_pred             CeeEEEeCCHHHHHHHHHHHHHHHHHHHHHhhccCCchHHHHHHHHHHHHHHHHHHHhCCChHhhcccchhhHHHHhcc-
Confidence            76 6555552                 45556788899999999999999999999999999998743      22211 


Q ss_pred             ChHHHHhh--hhhhccccCCCC------chhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChH
Q 044696          137 GSMAMELY--GERMIEKDFRPG------GFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQ  208 (220)
Q Consensus       137 ~s~~~~~~--~~~~~~~~~~~~------f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~  208 (220)
                       |+..+++  +..+.+| ++..      ..+....++.+.+.+.+++.    |+++|+.+.+.+++.       ++.+..
T Consensus       276 -s~~sRN~~~G~~l~~g-~~~~~~~~~~~~~~eG~~t~~~~~~la~~~----~v~~Pi~~~v~~il~-------~~~~~~  342 (356)
T 3k96_A          276 -DNQSRNRRFGLALGEG-VDKKEAQQAIGQAIEGLYNTDQVHALAQKH----AIEMPLTFQVHRILH-------EDLDPQ  342 (356)
T ss_dssp             -CTTCHHHHHHHHHHHT-CCHHHHHHHHCSCCSHHHHHHHHHHHHHHT----TCCCHHHHHHHHHHH-------SCCCHH
T ss_pred             -CCCCccHHHHHHHHCC-CCHHHHHHHcCCccchHHHHHHHHHHHHHc----CCCCcHHHHHHHHHh-------CCCCHH
Confidence             1222222  2233333 1110      23445678999999999999    999999999988874       455555


Q ss_pred             HHHHHH
Q 044696          209 GLVSVI  214 (220)
Q Consensus       209 av~~~~  214 (220)
                      ..++.+
T Consensus       343 ~~~~~l  348 (356)
T 3k96_A          343 QAVQEL  348 (356)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            544443

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=99.14  E-value=9.6e-11  Score=98.94  Aligned_cols=125  Identities=13%  Similarity=0.062  Sum_probs=101.2

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEE-EecCCCCh------HHhhccce-------e--EEecCCHHh
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAV-DAPVSGGD------IGARDGKL-------A--IFAAGDSAV   69 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~l-dapV~g~~------~~a~~g~l-------~--i~~gG~~~~   69 (220)
                      .+.+.++++++|||+||..|....  .+ + ..|.+|+ +.|++|++      ..+..|.+       .  +..+++++.
T Consensus        86 ~l~~~l~~~~ivv~~s~~~~~~~l--~~-~-~~~~~~v~~~P~~~~~~~~~~~~~~~~g~l~~~~~~~~i~~~~~~~~~~  161 (286)
T 3c24_A           86 DIVPRVRPGTIVLILDAAAPYAGV--MP-E-RADITYFIGHPCHPPLFNDETDPAARTDYHGGIAKQAIVCALMQGPEEH  161 (286)
T ss_dssp             HHGGGSCTTCEEEESCSHHHHHTC--SC-C-CTTSEEEEEEECCSCSSCCCCSHHHHTCSSSSSSCEEEEEEEEESCTHH
T ss_pred             HHHHhCCCCCEEEECCCCchhHHH--Hh-h-hCCCeEEecCCCCccccccccchhhccCcccccccceeeeeccCCCHHH
Confidence            355667889999999998865443  23 2 3478899 99999988      66777742       2  346789999


Q ss_pred             HHHHHHHHHHhcc----ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHhcc
Q 044696           70 VQWLTPLFEVLGK----PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEA-GLDVRKWRDAVKGG  134 (220)
Q Consensus        70 ~~~~~~~l~~~~~----~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~-Gl~~~~~~~~l~~~  134 (220)
                      +++++++|+.+|.    ++++++.+.+...|.++|.....++..++|++..+.+. |+|++++++++..+
T Consensus       162 ~~~v~~l~~~~G~~~~~~~~v~~~~~~~~~~a~~n~~~~~~~~~~~eal~~~~~~~Gl~~~~~~~~~~~~  231 (286)
T 3c24_A          162 YAIGADICETMWSPVTRTHRVTTEQLAILEPGLSEMVAMPFVETMVHAVDECADRYGIDRQAALDFMIGH  231 (286)
T ss_dssp             HHHHHHHHHHHTCSEEEEEECCHHHHHHHTTHHHHTTHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCcceEEEeChhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence            9999999999996    78899888888889999988889999999999877665 99999999998764

>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}

Probab=99.13  E-value=5.9e-10  Score=92.56  Aligned_cols=175  Identities=13%  Similarity=0.091  Sum_probs=118.2

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhccc
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGKP   83 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~~   83 (220)
                      +.+.++++.++.++++++++..+   +.+.+ +.+++- -+.+.|.....| ++++++|   +++.+++++++|+.+|.+
T Consensus        78 l~~~l~~~~vv~~~~gi~~~~l~---~~~~~-~~~~v~-~~p~~p~~~~~g-~~~~~~~~~~~~~~~~~~~~ll~~~G~~  151 (262)
T 2rcy_A           78 IKPYLSSKLLISICGGLNIGKLE---EMVGS-ENKIVW-VMPNTPCLVGEG-SFIYCSNKNVNSTDKKYVNDIFNSCGII  151 (262)
T ss_dssp             SGGGCTTCEEEECCSSCCHHHHH---HHHCT-TSEEEE-EECCGGGGGTCE-EEEEEECTTCCHHHHHHHHHHHHTSEEE
T ss_pred             HHHhcCCCEEEEECCCCCHHHHH---HHhCC-CCcEEE-ECCChHHHHcCC-eEEEEeCCCCCHHHHHHHHHHHHhCCCE
Confidence            44555455678889999997443   34433 323321 112334444467 7778777   688899999999999887


Q ss_pred             eecCCCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHH---hhhhhhccccC-CCCc
Q 044696           84 TFMGGAGCGQSCKI--ANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAME---LYGERMIEKDF-RPGG  157 (220)
Q Consensus        84 ~~~G~~G~a~~~Kl--~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~---~~~~~~~~~~~-~~~f  157 (220)
                      +++++......+++  +.|.+++..+.+++|+   +++.|++++.+++++..+...+..+.   ...|.+..+.+ .+++
T Consensus       152 ~~~~~~~~~~~~a~~~~~~~~~~~~~~al~~~---~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~  228 (262)
T 2rcy_A          152 HEIKEKDMDIATAISGCGPAYVYLFIESLIDA---GVKNGLSRELSKNLVLQTIKGSVEMVKKSDQPVQQLKDNIVSPGG  228 (262)
T ss_dssp             EECCGGGHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHCCTTS
T ss_pred             EEeCHHHccHHHHHHccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhcCCCCh
Confidence            88887655555555  4466666666666655   68999999999999887544443222   34567777666 4667


Q ss_pred             hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCC
Q 044696          158 FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG  201 (220)
Q Consensus       158 ~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G  201 (220)
                      +.....+++       ++.    |++.++.+++.+.|+++.+.+
T Consensus       229 t~~~~l~~l-------~~~----~~~~~~~~a~~~~~~r~~~~~  261 (262)
T 2rcy_A          229 ITAVGLYSL-------EKN----SFKYTVMNAVEAACEKSKAMG  261 (262)
T ss_dssp             HHHHHHHHH-------HHT----THHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHH-------HHC----ChHHHHHHHHHHHHHHHHHhc
Confidence            655554444       666    888899999999999988754

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=99.10  E-value=2.1e-11  Score=101.79  Aligned_cols=122  Identities=12%  Similarity=0.052  Sum_probs=93.3

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEe-cCCHHhHHHHHHHHHHhcc-ce
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA-AGDSAVVQWLTPLFEVLGK-PT   84 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~-gG~~~~~~~~~~~l~~~~~-~~   84 (220)
                      +.+.++++++||++||..|.+.  +++.+.+.+..|.++|++|++.. ..+.+.+++ +++++.+++++++|+.+|. ++
T Consensus        88 l~~~~~~~~ivv~~s~~~~~~~--l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~v~~~~~~~~~~~~~l~~~~g~~~~  164 (266)
T 3d1l_A           88 IVEGKREEALMVHTAGSIPMNV--WEGHVPHYGVFYPMQTFSKQREV-DFKEIPFFIEASSTEDAAFLKAIASTLSNRVY  164 (266)
T ss_dssp             HHTTCCTTCEEEECCTTSCGGG--STTTCSSEEEEEECCCC---CCC-CCTTCCEEEEESSHHHHHHHHHHHHTTCSCEE
T ss_pred             HHhhcCCCcEEEECCCCCchHH--HHHHHHhccCcCCceecCCCchh-hcCCCeEEEecCCHHHHHHHHHHHHhcCCcEE
Confidence            4456678999999999988543  55555545777899999986543 345556666 8899999999999999998 99


Q ss_pred             ecCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696           85 FMGGAG---CGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA  135 (220)
Q Consensus        85 ~~G~~G---~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~  135 (220)
                      ++++.+   ....+|+++|+.  .++..++|+  ++++.|+|++.+.+++..+.
T Consensus       165 ~~~~~~~~~~~~~~~l~~~~~--~~~~~~~ea--l~~~~Gl~~~~~~~l~~~~~  214 (266)
T 3d1l_A          165 DADSEQRKSLHLAAVFTCNFT--NHMYALAAE--LLKKYNLPFDVMLPLIDETA  214 (266)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHTTCCGGGGHHHHHHHH
T ss_pred             EeCHHHHHHHHHHHHHHHHHH--HHHHHHHHH--HHHHcCCCHHHHHHHHHHHH
Confidence            999754   568899999973  456777786  66899999999999998754

>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*

Probab=99.07  E-value=1.3e-10  Score=100.65  Aligned_cols=180  Identities=14%  Similarity=0.038  Sum_probs=118.2

Q ss_pred             hhhcCCCCCEEEecCC-CC--HHHHHHHHHHHHhc-CCcEEEecCCCChHHhh---cc--ceeEEecCCHHhHHHHHHHH
Q 044696            7 IVSALNPGAVYVDTTS-SH--PALAREIFKVARER-DCWAVDAPVSGGDIGAR---DG--KLAIFAAGDSAVVQWLTPLF   77 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST-~~--p~~~~~la~~~~~~-G~~~ldapV~g~~~~a~---~g--~l~i~~gG~~~~~~~~~~~l   77 (220)
                      +.+.+.++++||++++ ++  |++.+.+++.+.+. |   .++++..+|..+.   .|  ...++.+++++.+++++++|
T Consensus       110 i~~~l~~~~ivv~~~~Gi~~~~~~~~~l~~~l~~~~~---~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll  186 (354)
T 1x0v_A          110 LKGHLKANATGISLIKGVDEGPNGLKLISEVIGERLG---IPMSVLMGANIASEVADEKFCETTIGCKDPAQGQLLKELM  186 (354)
T ss_dssp             HTTCSCTTCEEEECCCCBCSSSSSCCBHHHHHHHHHT---CCEEEEECSCCHHHHHTTCCEEEEEECSSHHHHHHHHHHH
T ss_pred             HHhhCCCCCEEEEECCccCCCCCccccHHHHHHHHcC---CCEEEEECCCcHHHHHhcCCceEEEEECCHHHHHHHHHHh
Confidence            4556778999999987 44  34334444444432 3   2455655554332   34  34556677888899999999


Q ss_pred             HHhcc-ceecCCCC---HHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHcCC---CHHHHHH------H
Q 044696           78 EVLGK-PTFMGGAG---CGQSC--------------KIANQIVVGANLLGLSEGLVFADEAGL---DVRKWRD------A  130 (220)
Q Consensus        78 ~~~~~-~~~~G~~G---~a~~~--------------Kl~~n~~~~~~~~~~aEa~~la~~~Gl---~~~~~~~------~  130 (220)
                      +..+. +++.++.-   -+..+              |+.+|........++.|++.++++.|+   +++++.+      .
T Consensus       187 ~~~g~~~~~~~di~~~~~~k~~~N~~~~~~g~~~~~~~~~n~~~~~~~~~~~E~~~la~a~G~~~~~~~~~~~~~g~~d~  266 (354)
T 1x0v_A          187 QTPNFRITVVQEVDTVEICGALKNVVAVGAGFCDGLGFGDNTKAAVIRLGLMEMIAFAKLFCSGPVSSATFLESCGVADL  266 (354)
T ss_dssp             CBTTEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSSCCCGGGGGSTTTHHHH
T ss_pred             CCCCEEEEEcCCchHhHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccchHHHH
Confidence            99887 77777642   33333              333787878889999999999999999   8877643      2


Q ss_pred             HhccCCChHHHHhhhhhhccccCCC--------CchhhHHHHHHHHHHHHHhhcccCCCC--CccHHHHHHHHHH
Q 044696          131 VKGGAAGSMAMELYGERMIEKDFRP--------GGFAEYMVKDMGMGVDVVEESEDERVV--VLPGAALGKQLFS  195 (220)
Q Consensus       131 l~~~~~~s~~~~~~~~~~~~~~~~~--------~f~~~~~~KD~~~~~~~a~~~~~~~g~--~~p~~~~~~~~~~  195 (220)
                      +..... +... ...+.+.++.++.        .+......||+..+++.+++.    |+  ++|+.+.+.+++.
T Consensus       267 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~E~~~~~g~v~~~a~~~----gv~~~~P~~~~v~~~~~  335 (354)
T 1x0v_A          267 ITTCYG-GRNR-KVAEAFARTGKSIEQLEKELLNGQKLQGPETARELYSILQHK----GLVDKFPLFMAVYKVCY  335 (354)
T ss_dssp             HHHHHH-CHHH-HHHHHHHHHCCCHHHHHHHHSTTCCCHHHHHHHHHHHHHHHH----TCGGGSHHHHHHHHHHH
T ss_pred             HHhhcc-cccH-HHHHHHHhcCCCHHHHHHhhcCCcEeehHHHHHHHHHHHHHh----CCCCCCCHHHHHHHHHh
Confidence            222111 1111 1233443311211        144556789999999999999    99  9999999988875

>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}

Probab=99.01  E-value=1.2e-09  Score=95.63  Aligned_cols=177  Identities=8%  Similarity=-0.026  Sum_probs=117.8

Q ss_pred             cCCCCCEEEecCC-CCH--HHHHHHHHHHHhcCCcEEEecCCCChHHhh-----ccceeEEecCCHHhHHHHHHHHHHhc
Q 044696           10 ALNPGAVYVDTTS-SHP--ALAREIFKVARERDCWAVDAPVSGGDIGAR-----DGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus        10 ~~~~g~~ivd~ST-~~p--~~~~~la~~~~~~G~~~ldapV~g~~~~a~-----~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      .+.+++++|++++ ++|  ++.+.+++.+.+...  .++++..+|..+.     ...+.++.+++++.+++++++|+..+
T Consensus       130 ~l~~~~ivvs~~~Gi~~~~~~~~~l~~~l~~~~~--~~~~v~~gp~~a~~v~~g~~~~~~~~~~~~~~~~~v~~ll~~~g  207 (375)
T 1yj8_A          130 KIASHAKAISLTKGFIVKKNQMKLCSNYISDFLN--IPCSALSGANIAMDVAMENFSEATIGGNDKDSLVIWQRVFDLPY  207 (375)
T ss_dssp             CCCTTCEEEECCCSCEEETTEEECHHHHHHHHSS--SCEEEEECSCCHHHHHTTCCEEEEEECSCHHHHHHHHHHHCBTT
T ss_pred             cCCCCCEEEEeCCccccCCccccCHHHHHHHHcC--CCEEEEeCCchHHHHHhCCCeEEEEecCCHHHHHHHHHHhCCCC
Confidence            5678999999984 566  233444444443211  2455555554332     34456667788889999999999988


Q ss_pred             c-ceecCCC---CHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHc--CCCHHHHHH------HHhccC
Q 044696           82 K-PTFMGGA---GCGQSC--------------KIANQIVVGANLLGLSEGLVFADEA--GLDVRKWRD------AVKGGA  135 (220)
Q Consensus        82 ~-~~~~G~~---G~a~~~--------------Kl~~n~~~~~~~~~~aEa~~la~~~--Gl~~~~~~~------~l~~~~  135 (220)
                      . +++.+++   .-+..+              |+.+|........++.|++.++++.  |++++++.+      ++....
T Consensus       208 ~~~~~~~di~~~~~~k~l~N~~~~~~g~~~~~~~~~n~~~a~~~~~~~E~~~la~a~G~G~~~~~~~~~~g~~dl~~t~~  287 (375)
T 1yj8_A          208 FKINCVNETIEVEICGALKNIITLACGFCDGLNLPTNSKSAIIRNGINEMILFGKVFFQKFNENILLESCGFADIITSFL  287 (375)
T ss_dssp             EEEEEESCSHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHSSCCCGGGGGSTTTHHHHHHHHS
T ss_pred             eEEEEeCCcHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccccccceeEeee
Confidence            7 7777774   233333              4447888888999999999999999  699877743      233222


Q ss_pred             C-ChHHHHhhhhhhcc-cc-CCCC--------chhhHHHHHHHHHHHHHhhcccCCCC--CccHHHHHHHHHH
Q 044696          136 A-GSMAMELYGERMIE-KD-FRPG--------GFAEYMVKDMGMGVDVVEESEDERVV--VLPGAALGKQLFS  195 (220)
Q Consensus       136 ~-~s~~~~~~~~~~~~-~~-~~~~--------f~~~~~~KD~~~~~~~a~~~~~~~g~--~~p~~~~~~~~~~  195 (220)
                      . .++.   ..+.+.+ ++ ++.+        ++.....||+..+.+.+++.    |+  ++|+.+.+.+++.
T Consensus       288 ~~~~~~---~~~~~~~~g~~~~~~d~~~~~~~g~~~E~~~~~~~v~~~a~~~----gv~~~~P~~~~v~~~~~  353 (375)
T 1yj8_A          288 AGRNAK---CSAEFIKSTPKKTWEELENEILKGQKLQGTVTLKYVYHMIKEK----NMTNEFPLFTVLHKISF  353 (375)
T ss_dssp             SSSHHH---HHHHHHHHTTSSCHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT----TCGGGCHHHHHHHHHHH
T ss_pred             CCccHH---HHHHHHhcCCCCCHHHHHHhhcCCcEeeHHHHHHHHHHHHHHh----CCCCCCCHHHHHHHHHh
Confidence            1 1111   1333333 21 2111        45567789999999999999    99  9999999988865

>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6

Probab=98.93  E-value=1e-09  Score=94.91  Aligned_cols=187  Identities=14%  Similarity=0.058  Sum_probs=114.1

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcC---CcEEE---ecCCCChHHhhccceeEEe------------cCCH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERD---CWAVD---APVSGGDIGARDGKLAIFA------------AGDS   67 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G---~~~ld---apV~g~~~~a~~g~l~i~~------------gG~~   67 (220)
                      .+.+.+.++++||++.++.+.. .++.+.+.+.|   +.|+|   +|+.+...+  .+.+.++.            ++++
T Consensus        94 ~l~~~l~~~~~vv~~~~~~~~~-~~~~~~l~~~~~~~v~~~~~~~~~~~~~~~g--pg~v~~~~~~~~~~~g~~~~~~~~  170 (359)
T 1bg6_A           94 NIASYISEGQLIILNPGATGGA-LEFRKILRENGAPEVTIGETSSMLFTCRSER--PGQVTVNAIKGAMDFACLPAAKAG  170 (359)
T ss_dssp             HHGGGCCTTCEEEESSCCSSHH-HHHHHHHHHTTCCCCEEEEESSCSEEEECSS--TTEEEEEEECSCEEEEEESGGGHH
T ss_pred             HHHHhCCCCCEEEEcCCCchHH-HHHHHHHHhcCCCCeEEEEecCCcEEEEeCC--CCEEEEEEeecceEEEeccccccH
Confidence            3556788899999996656543 34566666665   56787   676654222  23333322            3455


Q ss_pred             HhHHHHHHHHHHhc--c-c-----------eecCC--CCHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHcC
Q 044696           68 AVVQWLTPLFEVLG--K-P-----------TFMGG--AGCGQSCKIANQI----------VVGANLLGLSEGLVFADEAG  121 (220)
Q Consensus        68 ~~~~~~~~~l~~~~--~-~-----------~~~G~--~G~a~~~Kl~~n~----------~~~~~~~~~aEa~~la~~~G  121 (220)
                      +.+++++++|..+.  . +           ++.+.  .+.+...| ++|+          .......++.|++.++++.|
T Consensus       171 ~~~~~l~~~~~~~~~~~di~~k~~~nvn~~~n~~~al~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~E~~~va~a~G  249 (359)
T 1bg6_A          171 WALEQIGSVLPQYVAVENVLHTSLTNVNAVMHPLPTLLNAARCES-GTPFQYYLEGITPSVGSLAEKVDAERIAIAKAFD  249 (359)
T ss_dssp             HHHHHHTTTCTTEEECSCHHHHHHCCHHHHHTHHHHHTTHHHHHT-TCCCBHHHHHCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHhhhcEEcCChHhhhccCCCccccHHHHHhhhchhhc-CCccchhhcCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            56777788776553  1 1           11111  13444333 2222          34567888999999999999


Q ss_pred             CCHHHHHHHHhccCCChHH--HHh-hhhhhccccCCC-CchhhHHHHHH----HHHHHHHhhcccCCCCCccHHHHHHHH
Q 044696          122 LDVRKWRDAVKGGAAGSMA--MEL-YGERMIEKDFRP-GGFAEYMVKDM----GMGVDVVEESEDERVVVLPGAALGKQL  193 (220)
Q Consensus       122 l~~~~~~~~l~~~~~~s~~--~~~-~~~~~~~~~~~~-~f~~~~~~KD~----~~~~~~a~~~~~~~g~~~p~~~~~~~~  193 (220)
                      ++++.+.+.+......++.  .+. ..+.|..+...| .+....+.||+    ..+++.+++.    |+|+|+.+.+.++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~sm~~d~~~~~e~~~~~~~~D~~~~~g~~~~~a~~~----gv~~P~~~~l~~~  325 (359)
T 1bg6_A          250 LNVPSVCEWYKESYGQSPATIYEAVQGNPAYRGIAGPINLNTRYFFEDVSTGLVPLSELGRAV----NVPTPLIDAVLDL  325 (359)
T ss_dssp             CCCCCHHHHC-------CCSHHHHHHTCGGGTTCBCCSSSCCHHHHHHHHTTHHHHHHHHHHT----TCCCHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHhCCCcccHHHHHhcchhhcCCCCCCCCCccceecCcCccHHHHHHHHHHc----CCCchHHHHHHHH
Confidence            9998888887654332221  111 123344433323 23444889998    7899999999    9999999999999


Q ss_pred             HHHHHHC
Q 044696          194 FSAMVAN  200 (220)
Q Consensus       194 ~~~a~~~  200 (220)
                      ++.....
T Consensus       326 ~~~~~~~  332 (359)
T 1bg6_A          326 ISSLIDT  332 (359)
T ss_dssp             HHHHTTC
T ss_pred             HHHHHCC
Confidence            9876655

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=98.79  E-value=8.1e-09  Score=82.95  Aligned_cols=93  Identities=12%  Similarity=0.110  Sum_probs=77.8

Q ss_pred             CCCEEEecCC-CC-----------HHHHHHHHHHHHhcCCcEEEe--cCCCChHHh--hccceeEEecCC-HHhHHHHHH
Q 044696           13 PGAVYVDTTS-SH-----------PALAREIFKVARERDCWAVDA--PVSGGDIGA--RDGKLAIFAAGD-SAVVQWLTP   75 (220)
Q Consensus        13 ~g~~ivd~ST-~~-----------p~~~~~la~~~~~~G~~~lda--pV~g~~~~a--~~g~l~i~~gG~-~~~~~~~~~   75 (220)
                      +++++||+++ ++           |...+++++.+.  +.+|+++  |+.+.....  ..+.++++++|+ ++.++++++
T Consensus        89 ~~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~  166 (212)
T 1jay_A           89 REKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLE--SEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMS  166 (212)
T ss_dssp             TTSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHT--CSCEEECCTTCCHHHHHCTTCCCCEEEEEEESCHHHHHHHHH
T ss_pred             CCCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCC--CCeEEEEccchHHHHhhCcCCCCCccEEEECCcHHHHHHHHH
Confidence            5899999998 33           345778887775  5789999  877766655  778899999997 889999999


Q ss_pred             HHHHh-cc-ceecCCCCHHHHHHHHHHHHHHHHH
Q 044696           76 LFEVL-GK-PTFMGGAGCGQSCKIANQIVVGANL  107 (220)
Q Consensus        76 ~l~~~-~~-~~~~G~~G~a~~~Kl~~n~~~~~~~  107 (220)
                      +|+.+ |. ++++|+.+.++.+|+++|++...+.
T Consensus       167 l~~~~~G~~~~~~~~~~~a~~~k~~~~~~~~~~~  200 (212)
T 1jay_A          167 LISEIDGLRPLDAGPLSNSRLVESLTPLILNIMR  200 (212)
T ss_dssp             HHHHSTTEEEEEEESGGGHHHHHTHHHHHHHHHH
T ss_pred             HHHHcCCCCceeccchhHHHHhcchHHHHHHHHH
Confidence            99999 99 9999999999999999998886543

>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}

Probab=98.77  E-value=5.7e-09  Score=94.67  Aligned_cols=108  Identities=25%  Similarity=0.236  Sum_probs=88.0

Q ss_pred             hhhcCCCCCEE-EecCCCCHHHHHHHHHHH----HhcCCcEEE-ecCCCChHHhhccceeEEecC---CHHhHHHHHHHH
Q 044696            7 IVSALNPGAVY-VDTTSSHPALAREIFKVA----RERDCWAVD-APVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLF   77 (220)
Q Consensus         7 i~~~~~~g~~i-vd~ST~~p~~~~~la~~~----~~~G~~~ld-apV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l   77 (220)
                      +.+.+++++++ .|+||++++.   +++.+    +-.|.+|.+ +|++         +++.+++|   ++++++++++++
T Consensus       106 l~~~~~~~~IlasntSti~i~~---ia~~~~~p~~~ig~hf~~Pa~v~---------~Lvevv~g~~Ts~e~~~~~~~l~  173 (483)
T 3mog_A          106 LAEVCPPQTLLTTNTSSISITA---IAAEIKNPERVAGLHFFNPAPVM---------KLVEVVSGLATAAEVVEQLCELT  173 (483)
T ss_dssp             HHHHSCTTCEEEECCSSSCHHH---HTTTSSSGGGEEEEEECSSTTTC---------CEEEEEECSSCCHHHHHHHHHHH
T ss_pred             HHHhhccCcEEEecCCCCCHHH---HHHHccCccceEEeeecChhhhC---------CeEEEecCCCCCHHHHHHHHHHH
Confidence            45567889988 5899999973   33333    224777877 5665         78899999   789999999999


Q ss_pred             HHhcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696           78 EVLGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA  135 (220)
Q Consensus        78 ~~~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~  135 (220)
                      +.+|+ ++++|+ +|     |++||++..    .+.|++.++++.+.|++++-+++..+.
T Consensus       174 ~~lGk~~v~v~d~~G-----fi~Nr~l~~----~~~Ea~~l~~~g~~~~~~id~a~~~~~  224 (483)
T 3mog_A          174 LSWGKQPVRCHSTPG-----FIVNRVARP----YYSEAWRALEEQVAAPEVIDAALRDGA  224 (483)
T ss_dssp             HHTTCEEEEEESCTT-----TTHHHHTHH----HHHHHHHHHHTTCSCHHHHHHHHHHTT
T ss_pred             HHhCCEEEEEeccCc-----chHHHHHHH----HHHHHHHHHHhCCCCHHHHHHHHHhcC
Confidence            99999 999997 55     889997776    689999999999999999999998543

>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6

Probab=98.69  E-value=3.9e-08  Score=82.58  Aligned_cols=114  Identities=15%  Similarity=0.030  Sum_probs=82.8

Q ss_pred             CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhh-ccceeEEecCCHHhHHHHHHHHHHhcc-ceecCCC
Q 044696           12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGAR-DGKLAIFAAGDSAVVQWLTPLFEVLGK-PTFMGGA   89 (220)
Q Consensus        12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~-~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~~G~~   89 (220)
                      .++++||++|+..|.+..+  +.  ..+..+.++|++|+|..++ ...++++++|+++.++.++++|+.+|. ++++++.
T Consensus        80 ~~~~ivi~~s~~~~~~~l~--~~--~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lG~~~~~v~~~  155 (276)
T 2i76_A           80 LGDAVLVHCSGFLSSEIFK--KS--GRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISGKYFVIPSE  155 (276)
T ss_dssp             CSSCCEEECCSSSCGGGGC--SS--SEEEEEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHHHHHCSCEEECCGG
T ss_pred             cCCCEEEECCCCCcHHHHH--Hh--hccccchhhhcCCCchhHHHhCCCeEEEEeChHHHHHHHHHHHHhCCCEEEECHH
Confidence            5789999999887764321  11  2234456778888776665 577788999999999999999999998 9999975


Q ss_pred             CH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH--HHHHHHhc
Q 044696           90 GC---GQSCKIANQIVVGANLLGLSEGLVFADEAGLDVR--KWRDAVKG  133 (220)
Q Consensus        90 G~---a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~--~~~~~l~~  133 (220)
                      +.   -...++++|++.    ..+.|+..++++.|++.+  .+.+++..
T Consensus       156 ~~~~~~~~~~l~~n~~~----~~~~~a~~~~~~~Gl~~~~a~~~~l~~~  200 (276)
T 2i76_A          156 KKKAYHLAAVIASNFPV----ALAYLSKRIYTLLGLDEPELLIHTLMKG  200 (276)
T ss_dssp             GHHHHHHHHHHHHTTHH----HHHHHHHHHHHTTTCSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence            43   355688888554    356778889999999988  55555553

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=98.53  E-value=7.6e-07  Score=74.32  Aligned_cols=118  Identities=17%  Similarity=0.186  Sum_probs=84.3

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCC----hHHhh----ccceeEEec---CCHHhHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGG----DIGAR----DGKLAIFAA---GDSAVVQWLT   74 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~----~~~a~----~g~l~i~~g---G~~~~~~~~~   74 (220)
                      +.+.++++++||+++++.+...+++.+.+    .+|+.+ |+.|+    |..+.    .+..++++.   ++++.+++++
T Consensus        77 l~~~~~~~~~vv~~~~~~~~~~~~~~~~~----~~~~~~~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~~~~~~~~~~v~  152 (279)
T 2f1k_A           77 LIPHLSPTAIVTDVASVKTAIAEPASQLW----SGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLR  152 (279)
T ss_dssp             HGGGSCTTCEEEECCSCCHHHHHHHHHHS----TTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHH
T ss_pred             HHhhCCCCCEEEECCCCcHHHHHHHHHHh----CCEeecCcccCCccCCHHHHhHHHhCCCcEEEecCCCCCHHHHHHHH
Confidence            45667889999999999998777666543    278888 88753    43332    455666663   5788999999


Q ss_pred             HHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC--HHHHHHHHh
Q 044696           75 PLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLD--VRKWRDAVK  132 (220)
Q Consensus        75 ~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~--~~~~~~~l~  132 (220)
                      ++|+.++. ++++++......+|+++|...+... ++.+++   .+.|++  .+....++.
T Consensus       153 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~p~~i~~-al~~~~---~~~~~~~~~~~~~~l~~  209 (279)
T 2f1k_A          153 SVLEPLGVKIYLCTPADHDQAVAWISHLPVMVSA-ALIQAC---AGEKDGDILKLAQNLAS  209 (279)
T ss_dssp             HHHGGGTCEEEECCHHHHHHHHHHHTHHHHHHHH-HHHHHH---HTCSCHHHHHHHHHHCC
T ss_pred             HHHHHcCCEEEEcCHHHHHHHHHHHhhHHHHHHH-HHHHHH---HhcccccchhHHHhhcC
Confidence            99999998 9999988889999999997444333 555543   356665  455555443

>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}

Probab=97.89  E-value=1.4e-08  Score=81.81  Aligned_cols=83  Identities=17%  Similarity=0.204  Sum_probs=67.6

Q ss_pred             CCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChH----------Hhhccce-----eEEecCCHHhHHHHHH
Q 044696           11 LNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDI----------GARDGKL-----AIFAAGDSAVVQWLTP   75 (220)
Q Consensus        11 ~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~----------~a~~g~l-----~i~~gG~~~~~~~~~~   75 (220)
                      +.++++|||+++..|...      +.+.+..++++|+.+.+.          ..+.|.+     .+++|++++.++++++
T Consensus        95 ~~~~~ivI~~~~G~~~~~------~~~~~~~~l~~~~~~~~vvra~~n~~a~~~~~g~l~g~~~~~~~g~~~~~~~~v~~  168 (201)
T 2yjz_A           95 SLKGRVLIDVSNNQKMNQ------YPESNAEYLAQLVPGAHVVKAFNTISAWALQSGTLDASRQVFVCGNDSKAKDRVMD  168 (201)
Confidence            457899999999998654      345567888888877644          4445664     7888999999999999


Q ss_pred             HHHHhcc-ceecCCCCHHHHHHHHH
Q 044696           76 LFEVLGK-PTFMGGAGCGQSCKIAN   99 (220)
Q Consensus        76 ~l~~~~~-~~~~G~~G~a~~~Kl~~   99 (220)
                      +|+.+|. ++|+|+.|+|+.+|.+-
T Consensus       169 ll~~~G~~~~~~G~l~~a~~~e~~~  193 (201)
T 2yjz_A          169 IARTLGLTPLDQGSLVAAKEIENYP  193 (201)
Confidence            9999999 99999999999999763

>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}

Probab=98.49  E-value=2.1e-07  Score=83.81  Aligned_cols=107  Identities=15%  Similarity=0.137  Sum_probs=81.4

Q ss_pred             hhhcCCCCCEEE-ecCCCCHHHHHHHHHHHH----hcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHH
Q 044696            7 IVSALNPGAVYV-DTTSSHPALAREIFKVAR----ERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFE   78 (220)
Q Consensus         7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~~~----~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~   78 (220)
                      +.+.++++++++ ++||+++..   +++.+.    -.|.+|++ |+.       ...|+-++.|   +++++++++++++
T Consensus       152 l~~~~~~~aIlasnTSsl~i~~---ia~~~~~p~r~iG~Hffn-Pv~-------~m~LvEIv~g~~Ts~e~~~~~~~l~~  220 (460)
T 3k6j_A          152 LENICKSTCIFGTNTSSLDLNE---ISSVLRDPSNLVGIHFFN-PAN-------VIRLVEIIYGSHTSSQAIATAFQACE  220 (460)
T ss_dssp             HHTTSCTTCEEEECCSSSCHHH---HHTTSSSGGGEEEEECCS-STT-------TCCEEEEECCSSCCHHHHHHHHHHHH
T ss_pred             HHhhCCCCCEEEecCCChhHHH---HHHhccCCcceEEEEecc-hhh-------hCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence            556788999986 577777754   444332    24778877 654       3456666665   7899999999999


Q ss_pred             Hhcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Q 044696           79 VLGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKG  133 (220)
Q Consensus        79 ~~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~  133 (220)
                      .+|+ ++++++ +|     .++|+++..    .+.|++.++++.|+|++++-+++..
T Consensus       221 ~lGk~~v~v~d~pG-----fi~Nril~~----~~~EA~~l~~~~Ga~~e~ID~a~~~  268 (460)
T 3k6j_A          221 SIKKLPVLVGNCKS-----FVFNRLLHV----YFDQSQKLMYEYGYLPHQIDKIITN  268 (460)
T ss_dssp             HTTCEEEEESSCCH-----HHHHHHHHH----HHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred             HhCCEEEEEecccH-----HHHHHHHHH----HHHHHHHHHHHcCCCHHHHHHHHHH
Confidence            9999 999997 55     367776663    5899999999999999999999873

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=98.48  E-value=1.7e-06  Score=74.07  Aligned_cols=95  Identities=16%  Similarity=0.197  Sum_probs=77.2

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCCC----hHHhh----ccceeEEec---CCHHhHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSGG----DIGAR----DGKLAIFAA---GDSAVVQWL   73 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g~----~~~a~----~g~l~i~~g---G~~~~~~~~   73 (220)
                      .+.+.++++++|+|++|+.+...+++.+.+.+   +|+. .|+.|+    +..+.    .|.+++++.   ++++.++++
T Consensus       113 ~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~---~~v~~hPm~G~e~sG~~~A~~~Lf~g~~~il~~~~~~~~~~~~~v  189 (314)
T 3ggo_A          113 KLSYILSEDATVTDQGSVKGKLVYDLENILGK---RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLV  189 (314)
T ss_dssp             HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---GEECEEECCCCCCCSGGGCCTTTTTTCEEEECCCTTSCHHHHHHH
T ss_pred             HHhhccCCCcEEEECCCCcHHHHHHHHHhcCC---CEEecCcccCCcccchhhhhhhhhcCCEEEEEeCCCCCHHHHHHH
Confidence            35567889999999999999888888877754   8998 699884    55544    577888884   678999999


Q ss_pred             HHHHHHhcc-ceecCCCCHHHHHHHHHHHHH
Q 044696           74 TPLFEVLGK-PTFMGGAGCGQSCKIANQIVV  103 (220)
Q Consensus        74 ~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~  103 (220)
                      +++|+.+|. ++++++......++++..+-.
T Consensus       190 ~~l~~~~G~~v~~~~~~~hD~~~a~~s~lph  220 (314)
T 3ggo_A          190 KRVWEDVGGVVEYMSPELHDYVFGVVSHLPH  220 (314)
T ss_dssp             HHHHHHTTCEEEECCHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHcCCEEEEcCHHHHHHHHHHHHHHHH
Confidence            999999999 999998888888888865444

>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}

Probab=98.46  E-value=1.6e-06  Score=71.36  Aligned_cols=129  Identities=12%  Similarity=0.069  Sum_probs=80.8

Q ss_pred             chhhcCCCCCEEE-ecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEe--cCCHHhHHHHHHHHHHhcc
Q 044696            6 GIVSALNPGAVYV-DTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA--AGDSAVVQWLTPLFEVLGK   82 (220)
Q Consensus         6 gi~~~~~~g~~iv-d~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~--gG~~~~~~~~~~~l~~~~~   82 (220)
                      ++.+.++++++|| ++++++++..   .+.+. .+.+++-. +...|.....|...++.  +++++.+++++++|+.+|.
T Consensus        82 ~l~~~l~~~~~vvs~~~gi~~~~l---~~~~~-~~~~~v~~-~p~~p~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~G~  156 (247)
T 3gt0_A           82 EIKEIIKNDAIIVTIAAGKSIEST---ENAFN-KKVKVVRV-MPNTPALVGEGMSALCPNEMVTEKDLEDVLNIFNSFGQ  156 (247)
T ss_dssp             --CCSSCTTCEEEECSCCSCHHHH---HHHHC-SCCEEEEE-ECCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHGGGEE
T ss_pred             HHHhhcCCCCEEEEecCCCCHHHH---HHHhC-CCCcEEEE-eCChHHHHcCceEEEEeCCCCCHHHHHHHHHHHHhCCC
Confidence            3555677899888 6677776543   34443 34455432 11233333445555555  3788999999999999999


Q ss_pred             ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHhccCCChHHH
Q 044696           83 PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVF-ADEAGLDVRKWRDAVKGGAAGSMAM  141 (220)
Q Consensus        83 ~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~l-a~~~Gl~~~~~~~~l~~~~~~s~~~  141 (220)
                      ++++++.-.-..+-++..  .-..+..+.|++.. +.+.|+|+++.++++..+...++.+
T Consensus       157 ~~~~~e~~~d~~~a~~g~--gpa~~~~~~eal~~a~~~~Gl~~~~a~~~~~~~~~gs~~~  214 (247)
T 3gt0_A          157 TEIVSEKLMDVVTSVSGS--SPAYVYMIIEAMADAAVLDGMPRNQAYKFAAQAVLGSAKM  214 (247)
T ss_dssp             EEECCGGGHHHHHHHHHH--HHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeCHHHccHHHHHhcc--HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence            556665322222222221  11345567777777 8999999999999998876555544

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=98.35  E-value=2.9e-06  Score=70.87  Aligned_cols=112  Identities=16%  Similarity=0.213  Sum_probs=84.6

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCC----ChHHhh----ccceeEEe---cCCHHhHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSG----GDIGAR----DGKLAIFA---AGDSAVVQWLT   74 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g----~~~~a~----~g~l~i~~---gG~~~~~~~~~   74 (220)
                      +.+.++++.+|+|++++.+...+.+.+.+.+   .|++ .|+.|    ||..+.    .+..++++   +++++.+++++
T Consensus        82 l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~---~~v~~~p~~~~~~~gp~~a~~~l~~g~~~~~~~~~~~~~~~~~~v~  158 (281)
T 2g5c_A           82 LSYILSEDATVTDQGSVKGKLVYDLENILGK---RFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVK  158 (281)
T ss_dssp             HHHHSCTTCEEEECCSCCTHHHHHHHHHHGG---GEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHH
T ss_pred             HHhhCCCCcEEEECCCCcHHHHHHHHHhccc---cceeeccccCCccCChhhhhhHHhCCCCEEEecCCCCCHHHHHHHH
Confidence            4456789999999999999888888887765   2777 58776    345443    67778888   78899999999


Q ss_pred             HHHHHhcc-ceecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Q 044696           75 PLFEVLGK-PTFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVR  125 (220)
Q Consensus        75 ~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~  125 (220)
                      ++|+.+|. ++++++...+..+|+++|..... ..++.+++..   .|++.+
T Consensus       159 ~l~~~~g~~~~~~~~~~~d~~~~~~~~~~~~~-a~~~~~~~~~---~~~~~~  206 (281)
T 2g5c_A          159 RVWEDVGGVVEYMSPELHDYVFGVVSHLPHAV-AFALVDTLIH---MSTPEV  206 (281)
T ss_dssp             HHHHHTTCEEEECCHHHHHHHHHHHTHHHHHH-HHHHHHHHHH---HCBTTB
T ss_pred             HHHHHcCCEEEEcCHHHHHHHHHHHHHHHHHH-HHHHHHHHHh---cccchH
Confidence            99999999 88999877799999999876543 2344454433   355543

>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*

Probab=98.34  E-value=1.3e-06  Score=74.06  Aligned_cols=108  Identities=19%  Similarity=0.190  Sum_probs=78.6

Q ss_pred             hhhcCCCCCEEE-ecCCCCHHHHHHHHHHHH----hcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHH
Q 044696            7 IVSALNPGAVYV-DTTSSHPALAREIFKVAR----ERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFE   78 (220)
Q Consensus         7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~~~----~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~   78 (220)
                      +.+.++++++|+ ++||+++++   +++.+.    -.|.+|.+ |+.       .+.+..+++|   +++++++++++++
T Consensus       122 l~~~~~~~~iv~s~ts~i~~~~---l~~~~~~~~~~~g~h~~~-P~~-------~~~~~~i~~g~~~~~e~~~~~~~l~~  190 (302)
T 1f0y_A          122 LDKFAAEHTIFASNTSSLQITS---IANATTRQDRFAGLHFFN-PVP-------VMKLVEVIKTPMTSQKTFESLVDFSK  190 (302)
T ss_dssp             HTTTSCTTCEEEECCSSSCHHH---HHTTSSCGGGEEEEEECS-STT-------TCCEEEEECCTTCCHHHHHHHHHHHH
T ss_pred             HHhhCCCCeEEEECCCCCCHHH---HHHhcCCcccEEEEecCC-Ccc-------cCceEEEeCCCCCCHHHHHHHHHHHH
Confidence            345567788887 567777764   333332    23455554 332       3456667777   7899999999999


Q ss_pred             Hhcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc
Q 044696           79 VLGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG  134 (220)
Q Consensus        79 ~~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~  134 (220)
                      .+|+ ++++++ +|     +++||++.    ..+.|++.++++.|++++++.+++..+
T Consensus       191 ~~G~~~v~~~~~~g-----~i~nr~l~----~~~~Ea~~l~~~g~~~~~~id~~~~~g  239 (302)
T 1f0y_A          191 ALGKHPVSCKDTPG-----FIVNRLLV----PYLMEAIRLYERGDASKEDIDTAMKLG  239 (302)
T ss_dssp             HTTCEEEEECSCTT-----TTHHHHHH----HHHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred             HcCCceEEecCccc-----ccHHHHHH----HHHHHHHHHHHcCCCCHHHHHHHHHhC
Confidence            9999 999987 55     67787664    468999999999999999998888754

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=98.32  E-value=5.8e-06  Score=70.03  Aligned_cols=118  Identities=12%  Similarity=0.144  Sum_probs=86.7

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEe-cCCCChHHhhccceeEEecC-CHHhHHHHHHHHHHhcc-c
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDA-PVSGGDIGARDGKLAIFAAG-DSAVVQWLTPLFEVLGK-P   83 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~lda-pV~g~~~~a~~g~l~i~~gG-~~~~~~~~~~~l~~~~~-~   83 (220)
                      +.+.++++++|+|++++.+...+++.+.   .+.+|+.. |+.|+......|..++++.+ +++.+++++++|+.+|. +
T Consensus        85 l~~~l~~~~iv~~~~svk~~~~~~~~~~---~~~~~v~~hP~~g~~~~~~~g~~~~l~~~~~~~~~~~v~~l~~~~G~~~  161 (298)
T 2pv7_A           85 LKPYLTENMLLADLTSVKREPLAKMLEV---HTGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLEQIQIWGAKI  161 (298)
T ss_dssp             HGGGCCTTSEEEECCSCCHHHHHHHHHH---CSSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHHHHHHTTCEE
T ss_pred             HHhhcCCCcEEEECCCCCcHHHHHHHHh---cCCCEEeeCCCCCCCchhhcCCeEEEecCCCHHHHHHHHHHHHHcCCEE
Confidence            4566788999999999998877766554   34688886 99887665656777777755 67888999999999999 8


Q ss_pred             eecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Q 044696           84 TFMGGAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAV  131 (220)
Q Consensus        84 ~~~G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l  131 (220)
                      +++++......++++.++-... ...+.|++.   +.|++.+...+..
T Consensus       162 ~~~~~~~~d~~~a~~~~~p~~~-a~~l~~~l~---~~g~~~~~~~~la  205 (298)
T 2pv7_A          162 YQTNATEHDHNMTYIQALRHFS-TFANGLHLS---KQPINLANLLALS  205 (298)
T ss_dssp             EECCHHHHHHHHHHHTHHHHHH-HHHHHHHHT---TSSCCHHHHHHTC
T ss_pred             EECCHHHHHHHHHHHHHHHHHH-HHHHHHHHH---hcCCCHHHHHhhc
Confidence            8998776788888888764432 233444443   3788876655443

>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*

Probab=98.30  E-value=1.1e-06  Score=83.31  Aligned_cols=105  Identities=15%  Similarity=0.226  Sum_probs=78.1

Q ss_pred             hhhcCCCCCEEE-ecCCCCHHHHHHHHHHHHh----cCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHH
Q 044696            7 IVSALNPGAVYV-DTTSSHPALAREIFKVARE----RDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFE   78 (220)
Q Consensus         7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~~~~----~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~   78 (220)
                      +.+.++++++++ ++||+++++   +++.+..    .|.||++ |+..       +.+..++.|   +++++++++++++
T Consensus       415 l~~~~~~~~IlasntStl~i~~---la~~~~~~~~~ig~hf~~-P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~  483 (715)
T 1wdk_A          415 VENHVREDAILASNTSTISISL---LAKALKRPENFVGMHFFN-PVHM-------MPLVEVIRGEKSSDLAVATTVAYAK  483 (715)
T ss_dssp             HHTTSCTTCEEEECCSSSCHHH---HGGGCSCGGGEEEEECCS-STTT-------CCEEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHhhCCCCeEEEeCCCCCCHHH---HHHHhcCccceEEEEccC-Cccc-------CceEEEEECCCCCHHHHHHHHHHHH
Confidence            455678888887 577887763   4443321    4677766 5543       345656666   7899999999999


Q ss_pred             Hhcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Q 044696           79 VLGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVK  132 (220)
Q Consensus        79 ~~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~  132 (220)
                      .+|+ ++++|+ +|.     ++||++.    ..+.|++.++++ |+|++++.+++.
T Consensus       484 ~lGk~~v~v~d~~Gf-----i~Nril~----~~~~Ea~~l~~~-G~~~~~id~~~~  529 (715)
T 1wdk_A          484 KMGKNPIVVNDCPGF-----LVNRVLF----PYFGGFAKLVSA-GVDFVRIDKVME  529 (715)
T ss_dssp             HTTCEEEEEESCTTT-----THHHHHH----HHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred             HhCCEeEEEcCCCCh-----hhhHHHH----HHHHHHHHHHHC-CCCHHHHHHHHH
Confidence            9999 999997 664     5666554    358999999997 999999999983

>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}

Probab=98.27  E-value=9.4e-07  Score=83.80  Aligned_cols=105  Identities=13%  Similarity=0.115  Sum_probs=78.8

Q ss_pred             hhhcCCCCCEEE-ecCCCCHHHHHHHHHHHHh----cCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHH
Q 044696            7 IVSALNPGAVYV-DTTSSHPALAREIFKVARE----RDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFE   78 (220)
Q Consensus         7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~~~~----~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~   78 (220)
                      +.+.++++++++ |+||+++++   +++.+..    .|.||++ |+..       ..+..++.|   +++++++++++++
T Consensus       413 l~~~~~~~~IlasntStl~i~~---la~~~~~p~~~iG~hf~~-P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~  481 (725)
T 2wtb_A          413 LEKYCPQHCILASNTSTIDLNK---IGERTKSQDRIVGAHFFS-PAHI-------MPLLEIVRTNHTSAQVIVDLLDVGK  481 (725)
T ss_dssp             HHHHSCTTCEEEECCSSSCHHH---HTTTCSCTTTEEEEEECS-STTT-------CCEEEEEECSSCCHHHHHHHHHHHH
T ss_pred             HHhhCCCCcEEEeCCCCCCHHH---HHHHhcCCCCEEEecCCC-Cccc-------CceEEEEECCCCCHHHHHHHHHHHH
Confidence            456678888885 567777764   4433321    4777877 6543       346666666   7899999999999


Q ss_pred             Hhcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Q 044696           79 VLGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVK  132 (220)
Q Consensus        79 ~~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~  132 (220)
                      .+|+ ++++|+ +|.     ++|+++.    ..+.|++.++++ |+|++++.+++.
T Consensus       482 ~lGk~~v~v~d~~Gf-----i~Nril~----~~~~Ea~~l~~~-G~~~e~id~~~~  527 (725)
T 2wtb_A          482 KIKKTPVVVGNCTGF-----AVNRMFF----PYTQAAMFLVEC-GADPYLIDRAIS  527 (725)
T ss_dssp             HTTCEEEEEESSTTT-----THHHHHH----HHHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred             HhCCEEEEECCCccH-----HHHHHHH----HHHHHHHHHHHC-CCCHHHHHHHHH
Confidence            9999 999997 664     5666554    358999999998 999999999994

>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A

Probab=98.17  E-value=4.2e-06  Score=70.23  Aligned_cols=82  Identities=17%  Similarity=0.255  Sum_probs=63.7

Q ss_pred             hhhc-CCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCC----ChHHhh----ccceeEEe---cCCHHhHHHH
Q 044696            7 IVSA-LNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSG----GDIGAR----DGKLAIFA---AGDSAVVQWL   73 (220)
Q Consensus         7 i~~~-~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g----~~~~a~----~g~l~i~~---gG~~~~~~~~   73 (220)
                      +.+. ++++++|||+|++.+...+.+.+.+.+++++|+. .|+.|    +|..+.    .|..++++   +++++.++++
T Consensus        86 l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~~v~~~P~~g~~~~g~~~a~~~l~~g~~~~~~~~~~~~~~~~~~v  165 (290)
T 3b1f_A           86 LADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQFVGSHPMAGSHKSGAVAANVNLFENAYYIFSPSCLTKPNTIPAL  165 (290)
T ss_dssp             HHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCEEEEEEEC-----CCTTSCCTTTTTTSEEEEEECTTCCTTHHHHH
T ss_pred             HHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCEEEEeCCcCCCCcchHHHhhHHHhCCCeEEEecCCCCCHHHHHHH
Confidence            4455 7789999999999998888888877666889998 58876    555444    56655555   5788899999


Q ss_pred             HHHHHHhcc-ceecCC
Q 044696           74 TPLFEVLGK-PTFMGG   88 (220)
Q Consensus        74 ~~~l~~~~~-~~~~G~   88 (220)
                      +++|+.+|. ++++++
T Consensus       166 ~~l~~~~G~~~~~~~~  181 (290)
T 3b1f_A          166 QDLLSGLHARYVEIDA  181 (290)
T ss_dssp             HHHTGGGCCEEEECCH
T ss_pred             HHHHHHcCCEEEEcCH
Confidence            999999999 888875

>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}

Probab=98.16  E-value=4.7e-06  Score=75.06  Aligned_cols=106  Identities=15%  Similarity=0.253  Sum_probs=78.4

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHh----cCCcEEEecCCCChHHhhccceeEEec---CCHHhHHHHHHHHHH
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARE----RDCWAVDAPVSGGDIGARDGKLAIFAA---GDSAVVQWLTPLFEV   79 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~----~G~~~ldapV~g~~~~a~~g~l~i~~g---G~~~~~~~~~~~l~~   79 (220)
                      +.+.++++++|+. ||+++..+ ++++.+..    .|.||. +|+..       ..+..++.   ++++++++++++++.
T Consensus       136 l~~~~~~~~ii~s-nTs~~~~~-~la~~~~~~~~~ig~hf~-~P~~~-------~~lvevv~g~~t~~e~~~~~~~l~~~  205 (463)
T 1zcj_A          136 LSALCKPGAFLCT-NTSALNVD-DIASSTDRPQLVIGTHFF-SPAHV-------MRLLEVIPSRYSSPTTIATVMSLSKK  205 (463)
T ss_dssp             HHHHSCTTCEEEE-CCSSSCHH-HHHTTSSCGGGEEEEEEC-SSTTT-------CCEEEEEECSSCCHHHHHHHHHHHHH
T ss_pred             HHhhCCCCeEEEe-CCCCcCHH-HHHHHhcCCcceEEeecC-CCccc-------ceeEEEeCCCCCCHHHHHHHHHHHHH
Confidence            4456778888886 77777665 67665532    367776 66543       34555555   488999999999999


Q ss_pred             hcc-ceecCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHh
Q 044696           80 LGK-PTFMGG-AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVK  132 (220)
Q Consensus        80 ~~~-~~~~G~-~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~  132 (220)
                      +|+ ++++++ +|.     ++|+++..    .+.|++.+.++ |++++++-+++.
T Consensus       206 lGk~~v~v~~~~gf-----i~Nrll~~----~~~ea~~l~~~-G~~~~~id~~~~  250 (463)
T 1zcj_A          206 IGKIGVVVGNCYGF-----VGNRMLAP----YYNQGFFLLEE-GSKPEDVDGVLE  250 (463)
T ss_dssp             TTCEEEEBCCSTTT-----THHHHHHH----HHHHHHHHHHT-TCCHHHHHHHHH
T ss_pred             hCCEEEEECCCccH-----HHHHHHHH----HHHHHHHHHHc-CCCHHHHHHHHH
Confidence            999 999997 664     45555443    35899999887 899999999987

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=98.16  E-value=1.5e-05  Score=66.86  Aligned_cols=113  Identities=13%  Similarity=0.140  Sum_probs=80.9

Q ss_pred             hhhcCCCCCEEE-ecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhcc
Q 044696            7 IVSALNPGAVYV-DTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGK   82 (220)
Q Consensus         7 i~~~~~~g~~iv-d~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~   82 (220)
                      +.+.++++++++ ++||++++   ++++.+. +..+++-.-...   ++..+++..++.|   +++++++++++++.+++
T Consensus       107 l~~~~~~~~il~s~tS~~~~~---~la~~~~-~~~~~ig~h~~~---p~~~~~lvevv~~~~t~~~~~~~~~~l~~~~g~  179 (283)
T 4e12_A          107 LGELAPAKTIFATNSSTLLPS---DLVGYTG-RGDKFLALHFAN---HVWVNNTAEVMGTTKTDPEVYQQVVEFASAIGM  179 (283)
T ss_dssp             HHHHSCTTCEEEECCSSSCHH---HHHHHHS-CGGGEEEEEECS---STTTSCEEEEEECTTSCHHHHHHHHHHHHHTTC
T ss_pred             HHhhCCCCcEEEECCCCCCHH---HHHhhcC-CCcceEEEccCC---CcccCceEEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence            456678999999 46666654   4444443 223344332222   1345778888888   58899999999999999


Q ss_pred             -ceecCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccC
Q 044696           83 -PTFMGG--AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGA  135 (220)
Q Consensus        83 -~~~~G~--~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~  135 (220)
                       +++++.  +|.     ++||++.    ..+.|++.+.++.+++++++-+++..+.
T Consensus       180 ~~v~v~~~~~g~-----i~nr~~~----~~~~ea~~l~~~g~~~~~~id~~~~~~~  226 (283)
T 4e12_A          180 VPIELKKEKAGY-----VLNSLLV----PLLDAAAELLVDGIADPETIDKTWRIGT  226 (283)
T ss_dssp             EEEECSSCCTTT-----THHHHHH----HHHHHHHHHHHTTSCCHHHHHHHHHHHH
T ss_pred             EEEEEecCCCCE-----EehHHHH----HHHHHHHHHHHhCCCCHHHHHHHHHhcc
Confidence             999954  553     5666654    3689999999999999999999997643

>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}

Probab=98.15  E-value=3.4e-08  Score=81.12  Aligned_cols=97  Identities=13%  Similarity=0.027  Sum_probs=78.2

Q ss_pred             hhcCCCCCEEEecCCCCHHH---HHHHHHHHHhcCCc-EEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-
Q 044696            8 VSALNPGAVYVDTTSSHPAL---AREIFKVARERDCW-AVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-   82 (220)
Q Consensus         8 ~~~~~~g~~ivd~ST~~p~~---~~~la~~~~~~G~~-~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-   82 (220)
                      ...+.+|+.+|++||..+..   .+++.+.++++|+. |+|+|++|+...+..+++    ++++..++..+|.++.++. 
T Consensus        68 ~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~  143 (236)
T 2dc1_A           68 EKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGGLDAIFSASE----LIEEIVLTTRKNWRQFGRKG  143 (236)
T ss_dssp             HHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSCHHHHHHTGG----GEEEEEEEEEEEGGGTTSCE
T ss_pred             HHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccChHHHHHhhc----cccEEEEEEEcChHHcCcce
Confidence            34567899999999988543   38999999999988 799999999999998886    7887777778888888888 


Q ss_pred             ceecCCCCHH-HHHHHHHHHHHHHHHH
Q 044696           83 PTFMGGAGCG-QSCKIANQIVVGANLL  108 (220)
Q Consensus        83 ~~~~G~~G~a-~~~Kl~~n~~~~~~~~  108 (220)
                      ++|.|+.+.+ +.+|..+|++....++
T Consensus       144 ~~~~G~~~~~~~~~~~~~n~~~~~~~a  170 (236)
T 2dc1_A          144 VIFEGSASEAAQKFPKNLNVAATLSIA  170 (236)
T ss_dssp             EEEEEEHHHHHHHSTTCCHHHHHHHHH
T ss_pred             EEEeccHHHHHHHCCchHHHHHHHHHh
Confidence            8999986444 5888888877644433

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=98.15  E-value=8.1e-07  Score=71.60  Aligned_cols=93  Identities=15%  Similarity=0.119  Sum_probs=65.5

Q ss_pred             hhcCCCCCEEEecCCCCH--H-------H----HHHHHHHHHhcCCcEEEe------cCCCChHHhhccceeEEecCC-H
Q 044696            8 VSALNPGAVYVDTTSSHP--A-------L----AREIFKVARERDCWAVDA------PVSGGDIGARDGKLAIFAAGD-S   67 (220)
Q Consensus         8 ~~~~~~g~~ivd~ST~~p--~-------~----~~~la~~~~~~G~~~lda------pV~g~~~~a~~g~l~i~~gG~-~   67 (220)
                      .+.++ ++++|++|+.-+  +       .    ++.+++.+.  +.+|+++      |..+.+.....+...++++|+ +
T Consensus        78 ~~~~~-~~~vi~~~~g~~~~~~~~l~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~p~~~~~~~~g~~~~~~~~~g~~~  154 (209)
T 2raf_A           78 ATQLK-GKIVVDITNPLNFDTWDDLVVPADSSAAQELQQQLP--DSQVLKAFNTTFAATLQSGQVNGKEPTTVLVAGNDD  154 (209)
T ss_dssp             HHHHT-TSEEEECCCCBCTTTSSSBSSCTTCCHHHHHHHHCT--TSEEEECSTTSCHHHHHHSEETTTEECEEEEEESCH
T ss_pred             HHhcC-CCEEEEECCCCCccccccccCCCCCcHHHHHHHHCC--CCcEEEeeecccHhhccccccCCCCCceeEEcCCCH
Confidence            34455 899999998332  1       1    455555553  5788883      333322222213556777776 4


Q ss_pred             HhHHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHH
Q 044696           68 AVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVV  103 (220)
Q Consensus        68 ~~~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~  103 (220)
                      +.+++++++|+.++. ++++|+.+.+..+|+++|++.
T Consensus       155 ~~~~~v~~ll~~~G~~~~~~~~i~~a~~~K~i~~l~~  191 (209)
T 2raf_A          155 SAKQRFTRALADSPLEVKDAGKLKRARELEAMGFMQM  191 (209)
T ss_dssp             HHHHHHHHHTTTSSCEEEEEESGGGHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCceEeCCCHhHHHHhcchHHHHH
Confidence            788999999999998 999999999999999998874

>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}

Probab=98.13  E-value=8.6e-05  Score=67.42  Aligned_cols=144  Identities=11%  Similarity=0.061  Sum_probs=104.1

Q ss_pred             HhHHHHHHHHHHhcc---ceecCCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHH
Q 044696           68 AVVQWLTPLFEVLGK---PTFMGGA-------GCGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAV  131 (220)
Q Consensus        68 ~~~~~~~~~l~~~~~---~~~~G~~-------G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l  131 (220)
                      .++.++.+.++....   ..+.|+.       +.++.+|++.|.+.++.+++++|++.+.++      .++|...+.+++
T Consensus       290 av~ar~~s~~k~~r~~~~~~~~gp~~~~~~~~~~~~~~~~v~~al~~~~i~syaqGf~ll~~as~~~~w~l~~~~ia~iw  369 (497)
T 2p4q_A          290 AVFARCLSALKNERIRASKVLPGPEVPKDAVKDREQFVDDLEQALYASKIISYAQGFMLIREAAATYGWKLNNPAIALMW  369 (497)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHCCCCCCCTTSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHH
T ss_pred             HHHHHHhhcchhhHHHHhhhcCCCCcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence            356677777665432   3455665       479999999999999999999999999988      799999999999


Q ss_pred             hccC-CChHHHHhhhhhhccc-cCC-----CCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCC
Q 044696          132 KGGA-AGSMAMELYGERMIEK-DFR-----PGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGD  202 (220)
Q Consensus       132 ~~~~-~~s~~~~~~~~~~~~~-~~~-----~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~  202 (220)
                      +.+. ..|++++...+...+. +.+     |.|  .+.......|.++..+-+.    |+|+|....+..+|+.-..   
T Consensus       370 r~GciIrs~~l~~i~~a~~~~~~l~~l~~~~~f~~~~~~~~~~~r~~v~~a~~~----gvp~P~~s~aL~~~~~~~~---  442 (497)
T 2p4q_A          370 RGGCIIRSVFLGQITKAYREEPDLENLLFNKFFADAVTKAQSGWRKSIALATTY----GIPTPAFSTALSFYDGYRS---  442 (497)
T ss_dssp             HSSSTTCBHHHHHHHHHHHHCTTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHTC---
T ss_pred             hcCCchHHHHHHHHHHHHhcCCChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHhccc---
Confidence            9876 6788887655544322 111     112  2333344688899999999    9999999999998886533   


Q ss_pred             CCCChHHHHHHHHHhcC
Q 044696          203 GKFGTQGLVSVIERING  219 (220)
Q Consensus       203 g~~d~~av~~~~~~~~~  219 (220)
                       +.-...++...|+..|
T Consensus       443 -~~~~a~liqa~Rd~FG  458 (497)
T 2p4q_A          443 -ERLPANLLQAQRDYFG  458 (497)
T ss_dssp             -SSCTHHHHHHHHHHHS
T ss_pred             -CCchhHHHHHHHHhcC
Confidence             2233456666665544

>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*

Probab=98.07  E-value=7.3e-05  Score=67.57  Aligned_cols=142  Identities=8%  Similarity=0.058  Sum_probs=102.5

Q ss_pred             hHHHHHHHHHHhcc---ceecCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhcc
Q 044696           69 VVQWLTPLFEVLGK---PTFMGGA-----GCGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKGG  134 (220)
Q Consensus        69 ~~~~~~~~l~~~~~---~~~~G~~-----G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~~  134 (220)
                      ++.++.+.++..-.   ..+.|+.     +.++.+|++.|.+.++.+++++|++.+.++      .++|...+.++++.+
T Consensus       296 v~ar~~s~~k~~R~~~~~~~~g~~~~~~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~iwr~G  375 (480)
T 2zyd_A          296 VFARYISSLKDQRVAASKVLSGPQAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAG  375 (480)
T ss_dssp             HHHHHHHTCHHHHHHHHTTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSSS
T ss_pred             HHHHhhhcchhhhHHhhcccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhcC
Confidence            45666666554322   3456765     889999999999999999999999999988      799999999999987


Q ss_pred             C-CChHHHHhhhhhhccc-cCC-----CCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCC
Q 044696          135 A-AGSMAMELYGERMIEK-DFR-----PGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKF  205 (220)
Q Consensus       135 ~-~~s~~~~~~~~~~~~~-~~~-----~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~  205 (220)
                      . -.|++++...+...+. +.+     |.|  .+.......|.++..+-+.    |+|+|...++..+|+.-...    .
T Consensus       376 ciIrs~~l~~i~~a~~~~~~l~~l~~~~~f~~~~~~~~~~~r~~v~~a~~~----gvp~p~~s~al~~~~~~~~~----~  447 (480)
T 2zyd_A          376 CIIRAQFLQKITDACAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQN----GIPVPTFSAAVAYYDSYRAA----V  447 (480)
T ss_dssp             STTCBTHHHHHHHHHHHCTTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHTCS----S
T ss_pred             cchHHHHHHHHHHHHhcCCChHhhhcCHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHhcccC----C
Confidence            6 6788887655544322 111     112  2333344688899999999    99999999999998865433    2


Q ss_pred             ChHHHHHHHHHhc
Q 044696          206 GTQGLVSVIERIN  218 (220)
Q Consensus       206 d~~av~~~~~~~~  218 (220)
                      -.+.++...|+..
T Consensus       448 ~~~~l~qa~Rd~F  460 (480)
T 2zyd_A          448 LPANLIQAQRDYF  460 (480)
T ss_dssp             CTHHHHHHHHHHH
T ss_pred             chhhHHHHHHHhc
Confidence            3345555555543

>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*

Probab=98.06  E-value=8.4e-05  Score=67.01  Aligned_cols=143  Identities=6%  Similarity=0.026  Sum_probs=102.7

Q ss_pred             HhHHHHHHHHHHhcc---ceecCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhc
Q 044696           68 AVVQWLTPLFEVLGK---PTFMGGA-----GCGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKG  133 (220)
Q Consensus        68 ~~~~~~~~~l~~~~~---~~~~G~~-----G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~  133 (220)
                      .++.++.+.++..-.   ..+.|+.     +.++.+|++.|.+.++.+++++|++.+.++      .++|...+.++++.
T Consensus       287 av~ar~~s~~k~~r~~~~~~~~g~~~~~~~~~~~~~~~v~~al~~~~~~~yaqGf~ll~~a~~~~~~~l~~~~ia~~wr~  366 (474)
T 2iz1_A          287 SVFARYISTYKDERVKASKVLSGPALDFSGDKKEVIEKIRKALYFSKIMSYAQGFAQLRKASEEFDWDLPYGTIAQIWRA  366 (474)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHCCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSS
T ss_pred             HHHHHHhhhhhhhhHHhhhccCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence            345666666654332   3455765     889999999999999999999999999988      79999999999998


Q ss_pred             cC-CChHHHHhhhhhhccc-cCC-----CCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCC
Q 044696          134 GA-AGSMAMELYGERMIEK-DFR-----PGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGK  204 (220)
Q Consensus       134 ~~-~~s~~~~~~~~~~~~~-~~~-----~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~  204 (220)
                      +. -.|++++...+...+. +.+     |.|  .+.......+.++..+-+.    |+|+|....+..+|+.-..    +
T Consensus       367 Gciirs~~l~~i~~a~~~~~~l~~l~~~~~~~~~~~~~~~~~r~~v~~a~~~----~~p~p~~s~al~~~~~~~~----~  438 (474)
T 2iz1_A          367 GCIIRAEFLQNITDAFDKDSELENLLLDDYFVDITKRYQEAVRDVVSLAVQA----GTPIPTFTSAISYYDSYRS----E  438 (474)
T ss_dssp             SCTTCBTTHHHHHHHHHHCTTCCCGGGSHHHHHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHTC----S
T ss_pred             cchHHHHHHHHHHHHHhcCCChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHhccc----C
Confidence            76 5788887654444322 111     112  2333345588899999999    9999999999998886533    2


Q ss_pred             CChHHHHHHHHHhc
Q 044696          205 FGTQGLVSVIERIN  218 (220)
Q Consensus       205 ~d~~av~~~~~~~~  218 (220)
                      .-.+.++...|+..
T Consensus       439 ~~~~~l~qa~rd~f  452 (474)
T 2iz1_A          439 NLPANLIQAQRDYF  452 (474)
T ss_dssp             SCTHHHHHHHHHHH
T ss_pred             CchhhHHHHHHHhc
Confidence            23345665555543

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=97.99  E-value=2.9e-05  Score=65.21  Aligned_cols=171  Identities=12%  Similarity=0.020  Sum_probs=106.2

Q ss_pred             CCCCCEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC---CHHhHHHHHHHHHHhccceec
Q 044696           11 LNPGAVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG---DSAVVQWLTPLFEVLGKPTFM   86 (220)
Q Consensus        11 ~~~g~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG---~~~~~~~~~~~l~~~~~~~~~   86 (220)
                      ++++++||.. +.++.   ..+.+++. .+.+++-+ +...|.....|. +.++.|   +++.+++++++|+.+|.++++
T Consensus        88 l~~~~iiiS~~agi~~---~~l~~~l~-~~~~vvr~-mPn~p~~v~~g~-~~l~~~~~~~~~~~~~v~~l~~~iG~~~~v  161 (280)
T 3tri_A           88 SETKILVISLAVGVTT---PLIEKWLG-KASRIVRA-MPNTPSSVRAGA-TGLFANETVDKDQKNLAESIMRAVGLVIWV  161 (280)
T ss_dssp             HTTTCEEEECCTTCCH---HHHHHHHT-CCSSEEEE-ECCGGGGGTCEE-EEEECCTTSCHHHHHHHHHHHGGGEEEEEC
T ss_pred             cCCCeEEEEecCCCCH---HHHHHHcC-CCCeEEEE-ecCChHHhcCcc-EEEEeCCCCCHHHHHHHHHHHHHCCCeEEE
Confidence            5667688765 44444   34555554 34555543 223454444443 445544   468899999999999995556


Q ss_pred             -CCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChH-HHHh--hhhh-hccccCCCCchh
Q 044696           87 -GGA--GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSM-AMEL--YGER-MIEKDFRPGGFA  159 (220)
Q Consensus        87 -G~~--G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~-~~~~--~~~~-~~~~~~~~~f~~  159 (220)
                       .+.  .....+.-+.+.+++..+.++.|+   +.+.|+++++.++++..+...+. ++..  .-|. +.+.-.+|+.+.
T Consensus       162 ~~E~~~d~~talsgsgpa~~~~~~eal~~a---~v~~Gl~~~~a~~l~~~t~~G~a~~~~~~~~~p~~l~~~v~spgGtT  238 (280)
T 3tri_A          162 SSEDQIEKIAALSGSGPAYIFLIMEALQEA---AEQLGLTKETAELLTEQTVLGAARMALETEQSVVQLRQFVTSPGGTT  238 (280)
T ss_dssp             SSHHHHHHHHHHTTSHHHHHHHHHHHHHHH---HHHTTCCHHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHCCTTSHH
T ss_pred             CCHHHhhHHHHHhccHHHHHHHHHHHHHHH---HHHcCCCHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhccCCChHH
Confidence             432  333333334455666777777776   66999999999999886543333 2221  1122 333334554332


Q ss_pred             hHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCC
Q 044696          160 EYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG  201 (220)
Q Consensus       160 ~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G  201 (220)
                             ...++..++.    |++..+.+++...++++.+.|
T Consensus       239 -------~~~l~~le~~----g~~~~~~~av~aa~~r~~el~  269 (280)
T 3tri_A          239 -------EQAIKVLESG----NLRELFIKALTAAVNRAKELS  269 (280)
T ss_dssp             -------HHHHHHHHTT----CHHHHHHHHHHHHHHHHHHHH
T ss_pred             -------HHHHHHHHHC----ChHHHHHHHHHHHHHHHHHHH
Confidence                   2256677888    999999999999999887754

>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*

Probab=97.83  E-value=0.00026  Score=63.95  Aligned_cols=129  Identities=9%  Similarity=0.033  Sum_probs=94.6

Q ss_pred             HhHHHHHHHHHHhcc---ceecCCC-CH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHh
Q 044696           68 AVVQWLTPLFEVLGK---PTFMGGA-GC-----GQSCKIANQIVVGANLLGLSEGLVFADEA------GLDVRKWRDAVK  132 (220)
Q Consensus        68 ~~~~~~~~~l~~~~~---~~~~G~~-G~-----a~~~Kl~~n~~~~~~~~~~aEa~~la~~~------Gl~~~~~~~~l~  132 (220)
                      ++++++.+.++....   ..+.|+. +.     ++.+|.+.|.+.++.+++++|++.+.++.      ++|...+.++++
T Consensus       283 av~~~~~s~~k~~r~~~~~~~~g~~~~~~~~~~~~~~~~v~~al~~~~~~syaqGf~ll~~as~~~~w~l~~~~ia~~wr  362 (482)
T 2pgd_A          283 AVFARCLSSLKDERIQASKKLKGPQNIPFEGDKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWR  362 (482)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTT
T ss_pred             HHHHHhhhhhhhHHHHHhhhcCCCCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence            455666666544321   3445654 44     89999999999999999999999999883      999999999999


Q ss_pred             ccC-CChHHHHhhhhhhccc-cC-----CCCc--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696          133 GGA-AGSMAMELYGERMIEK-DF-----RPGG--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVAN  200 (220)
Q Consensus       133 ~~~-~~s~~~~~~~~~~~~~-~~-----~~~f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~  200 (220)
                      .+. -.|++++...+...+. +.     ++.|  .+.......+.++..+.+.    |+|+|....+..+|+.-...
T Consensus       363 ~Gciirs~~l~~i~~a~~~~~~l~~l~~~~~~~~~~~~~~~~~r~~v~~a~~~----g~p~p~~s~al~~~~~~~~~  435 (482)
T 2pgd_A          363 GGCIIRSVFLGKIKDAFDRNPGLQNLLLDDFFKSAVENCQDSWRRAISTGVQA----GIPMPCFTTALSFYDGYRHA  435 (482)
T ss_dssp             SSSTTCBTHHHHHHHHHHHCTTCSCGGGSHHHHHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHCS
T ss_pred             cCcchHHHHHHHHHHHHhcCCChhhhhcCHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHhcccC
Confidence            876 5788887654444321 11     1212  2333445688999999999    99999999999988876544

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=97.72  E-value=7.5e-06  Score=66.11  Aligned_cols=91  Identities=16%  Similarity=0.213  Sum_probs=59.1

Q ss_pred             CCCEEEecCCCCHHHHHH----HHHHHHh--cCCcEEEe--cCCCCh--HHhhccc-eeEEecCCHHhHHHHHHHHHHhc
Q 044696           13 PGAVYVDTTSSHPALARE----IFKVARE--RDCWAVDA--PVSGGD--IGARDGK-LAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus        13 ~g~~ivd~ST~~p~~~~~----la~~~~~--~G~~~lda--pV~g~~--~~a~~g~-l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      +++++||+++..+....+    ..+.+.+  .+.+++-+  ++++.+  +.+..++ ..++.|++++.+++++++|+.+|
T Consensus       107 ~~~~vv~~s~g~~~~~l~~~~~~~~~l~~~l~~~~vv~~~n~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~~ll~~~G  186 (215)
T 2vns_A          107 AGKILVDVSNPTEQEHLQHRESNAEYLASLFPTCTVVKAFNVISAWTLQAGPRDGNRQVPICGDQPEAKRAVSEMALAMG  186 (215)
T ss_dssp             TTCEEEECCCCCHHHHHHCSSCHHHHHHHHCTTSEEEEECTTBCHHHHHTCSCSSCCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCCcccccccccccHHHHHHHHCCCCeEEeccccccHhHhcccccCCceeEEEecCCHHHHHHHHHHHHHcC
Confidence            799999999998865421    1111111  12233332  222111  1122233 36788889999999999999999


Q ss_pred             c-ceecCCCCHHHHHHHHHHHHH
Q 044696           82 K-PTFMGGAGCGQSCKIANQIVV  103 (220)
Q Consensus        82 ~-~~~~G~~G~a~~~Kl~~n~~~  103 (220)
                      . ++++|+.|+|+.++...++++
T Consensus       187 ~~~~~~g~~~~~~~~e~~~~~~~  209 (215)
T 2vns_A          187 FMPVDMGSLASAWEVEAMPLRLL  209 (215)
T ss_dssp             CEEEECCSGGGHHHHHHSCCBC-
T ss_pred             CceEeecchhhhhHhhhhhhhhe
Confidence            9 999999999999987655443

>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}

Probab=97.67  E-value=6.5e-05  Score=65.06  Aligned_cols=90  Identities=11%  Similarity=0.094  Sum_probs=70.7

Q ss_pred             CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCCCh-HHhh-------ccceeEEecC---CHH--------hHH
Q 044696           12 NPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSGGD-IGAR-------DGKLAIFAAG---DSA--------VVQ   71 (220)
Q Consensus        12 ~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g~~-~~a~-------~g~l~i~~gG---~~~--------~~~   71 (220)
                      ++|++|+|++|+.+...+++.+...  +++||. .|+.|+. .+..       .|...+++.+   +++        .++
T Consensus        92 ~~~~iv~Dv~Svk~~i~~~~~~~~~--~~~~v~~HPmaG~e~sG~~aa~~~Lf~g~~~iltp~~~~~~e~~~~~~~~~~~  169 (341)
T 3ktd_A           92 APNNGFTDVVSVKTAVYDAVKARNM--QHRYVGSHPMAGTANSGWSASMDGLFKRAVWVVTFDQLFDGTDINSTWISIWK  169 (341)
T ss_dssp             CTTCCEEECCSCSHHHHHHHHHTTC--GGGEECEEECCSCC-CCGGGCCSSTTTTCEEEECCGGGTSSCCCCHHHHHHHH
T ss_pred             CCCCEEEEcCCCChHHHHHHHHhCC--CCcEecCCccccccccchhhhhhHHhcCCeEEEEeCCCCChhhhccchHHHHH
Confidence            7899999999999988888876553  579999 6999874 3332       3446888876   445        889


Q ss_pred             HHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHH
Q 044696           72 WLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVV  103 (220)
Q Consensus        72 ~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~  103 (220)
                      +++++|+.+|. ++++++...-..+.++.++-.
T Consensus       170 ~v~~l~~~~Ga~v~~~~~~~HD~~~A~vshlPh  202 (341)
T 3ktd_A          170 DVVQMALAVGAEVVPSRVGPHDAAAARVSHLTH  202 (341)
T ss_dssp             HHHHHHHHTTCEEEECCHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHcCCEEEEeCHHHHHHHHHHHhHHHH
Confidence            99999999998 999998777777877766544

>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}

Probab=97.60  E-value=9.8e-08  Score=81.74  Aligned_cols=75  Identities=24%  Similarity=0.166  Sum_probs=62.4

Q ss_pred             hcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE----ecC-CCCh---HHhhccceeEEecCCHHhHHHHHHHHHHh
Q 044696            9 SALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD----APV-SGGD---IGARDGKLAIFAAGDSAVVQWLTPLFEVL   80 (220)
Q Consensus         9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld----apV-~g~~---~~a~~g~l~i~~gG~~~~~~~~~~~l~~~   80 (220)
                      +.+++|++|+|+||..|+. +++.+.+.++|..|+|    +|+ +|..   ..+..|+|..|++|+.+.+++..++|+.+
T Consensus       214 ~~l~~g~~vi~~g~~~p~~-~el~~~~~~~g~~~vD~~~~a~~~~G~~~~~~~~~~g~L~~~v~G~~~~~~~~~~vf~~~  292 (312)
T 2i99_A          214 EWVKPGAHINAVGASRPDW-RELDDELMKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSL  292 (312)
T ss_dssp             GGSCTTCEEEECCCCSTTC-CSBCHHHHHHSEEEESCHHHHHHHCHHHHTTTCCCCEEHHHHHHTSSCCCTTSCEEEECC
T ss_pred             HHcCCCcEEEeCCCCCCCc-eeccHHHHhcCEEEECCHHHHHhhcCCcccChhhccccHHHHhCCCCCCCCCCcEEEECC
Confidence            4678999999999999975 8999999999999999    788 5655   45667899999999988777777777777


Q ss_pred             cc-ce
Q 044696           81 GK-PT   84 (220)
Q Consensus        81 ~~-~~   84 (220)
                      |. +.
T Consensus       293 G~~i~  297 (312)
T 2i99_A          293 GMAVE  297 (312)
T ss_dssp             CCHHH
T ss_pred             ChHHH
Confidence            76 54

>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}

Probab=97.37  E-value=0.0011  Score=54.30  Aligned_cols=73  Identities=12%  Similarity=0.126  Sum_probs=55.7

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P   83 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~   83 (220)
                      ++.+.+++|++|||+|...+..   +.+.+.++|++|+- -|+.|.+        .++.++++++++.++++++.+|. +
T Consensus        60 ~l~~~l~~g~ivvd~sgs~~~~---vl~~~~~~g~~fvg~HPm~g~~--------~~i~a~d~~a~~~l~~L~~~lG~~v  128 (232)
T 3dfu_A           60 KLSAFARRGQMFLHTSLTHGIT---VMDPLETSGGIVMSAHPIGQDR--------WVASALDELGETIVGLLVGELGGSI  128 (232)
T ss_dssp             HHHTTCCTTCEEEECCSSCCGG---GGHHHHHTTCEEEEEEEEETTE--------EEEEESSHHHHHHHHHHHHHTTCEE
T ss_pred             HHHHhcCCCCEEEEECCcCHHH---HHHHHHhCCCcEEEeeeCCCCc--------eeeeCCCHHHHHHHHHHHHHhCCEE
Confidence            4556778999999997665432   23334567999984 7997653        55667788899999999999999 9


Q ss_pred             eecCCC
Q 044696           84 TFMGGA   89 (220)
Q Consensus        84 ~~~G~~   89 (220)
                      +++++.
T Consensus       129 v~~~~~  134 (232)
T 3dfu_A          129 VEIADD  134 (232)
T ss_dssp             CCCCGG
T ss_pred             EEeCHH
Confidence            999864

>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A

Probab=96.92  E-value=0.017  Score=52.13  Aligned_cols=120  Identities=8%  Similarity=0.044  Sum_probs=89.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhccC-CChHHHHhhhhhhccc-cC-----CCCc
Q 044696           91 CGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKGGA-AGSMAMELYGERMIEK-DF-----RPGG  157 (220)
Q Consensus        91 ~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~-----~~~f  157 (220)
                      ....+|.+.|.+.++.+.+++|++.+.++      .++|...+..+++.+. -.|++++...+...+. +.     +|.|
T Consensus       317 ~~~~~~~~~~al~~~~i~~yaqGf~ll~~as~~~~w~l~~~~ia~iwr~GciIrs~~l~~i~~a~~~~~~l~~ll~~~~f  396 (484)
T 4gwg_A          317 KKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPELQNLLLDDFF  396 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTSTTCTTCBHHHHHHHHHHHHCTTCSCGGGSHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHccCceeHHHHHHHHHHHHHhCCCchhhhcCHHH
Confidence            46789999999999999999999987765      5699999999999877 5788887654433221 11     1223


Q ss_pred             --hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhc
Q 044696          158 --FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERIN  218 (220)
Q Consensus       158 --~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~  218 (220)
                        .+.......|.++..+-+.    |+|.|.+.++.++|+.-.    .+.-.+.++...|+..
T Consensus       397 ~~~~~~~~~~~r~vv~~a~~~----gip~P~~s~al~y~~~~r----~~~lpanliqaqRd~F  451 (484)
T 4gwg_A          397 KSAVENCQDSWRRAVSTGVQA----GIPMPCFTTALSFYDGYR----HEMLPASLIQAQRDYF  451 (484)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHT----CSCCTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHhc----cCCCHHHHHHHHHHhh
Confidence              2444455677799999999    999999999999999883    3444555776666554

>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}

Probab=96.77  E-value=0.0005  Score=55.37  Aligned_cols=82  Identities=13%  Similarity=0.159  Sum_probs=55.8

Q ss_pred             CCCCEEEecCCCCH------------HHHHHHHHHHHhcCCcE------EEecCCC-ChHHhhccceeEEecCCHHhHHH
Q 044696           12 NPGAVYVDTTSSHP------------ALAREIFKVARERDCWA------VDAPVSG-GDIGARDGKLAIFAAGDSAVVQW   72 (220)
Q Consensus        12 ~~g~~ivd~ST~~p------------~~~~~la~~~~~~G~~~------ldapV~g-~~~~a~~g~l~i~~gG~~~~~~~   72 (220)
                      .++++||++++.-+            ...+.+++.+.  +.++      +.+++.. +|.....+...++.|.++++.++
T Consensus       104 ~~~~ivi~~~~g~~~~~~~~~~~~~~~~~~~l~~~l~--~~~vv~~~~~~~~~v~~~g~~~~~~~~~v~~~g~~~~~~~~  181 (220)
T 4huj_A          104 WGGQIVVDASNAIDFPAFKPRDLGGRLSTEIVSELVP--GAKVVKAFNTLPAAVLAADPDKGTGSRVLFLSGNHSDANRQ  181 (220)
T ss_dssp             CTTCEEEECCCCBCTTTCCBCCCTTCCHHHHHHHHST--TCEEEEESCSSCHHHHTSCSBCSSCEEEEEEEESCHHHHHH
T ss_pred             cCCCEEEEcCCCCCcccccccccCCCcHHHHHHHHCC--CCCEEECCCCCCHHHhhhCcccCCCCeeEEEeCCCHHHHHH
Confidence            36889999997652            25667777664  3333      3445544 44332223344555667789999


Q ss_pred             HHHHHHHhcc-ceecCCCCHHHHH
Q 044696           73 LTPLFEVLGK-PTFMGGAGCGQSC   95 (220)
Q Consensus        73 ~~~~l~~~~~-~~~~G~~G~a~~~   95 (220)
                      ++++|+.+|. ++++|+.++|..+
T Consensus       182 v~~l~~~~G~~~~~~G~l~~a~~~  205 (220)
T 4huj_A          182 VAELISSLGFAPVDLGTLAASGPI  205 (220)
T ss_dssp             HHHHHHHTTCEEEECCSHHHHHHH
T ss_pred             HHHHHHHhCCCeEeeCChhhcchh
Confidence            9999999999 9999998887554

>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}

Probab=96.17  E-value=0.1  Score=43.85  Aligned_cols=180  Identities=9%  Similarity=-0.020  Sum_probs=100.0

Q ss_pred             hhhcCCCCCEEEecCCC-CHHHHHHHHHHHHhc----CCcEEEecCCCChHHhhccceeEEecC----CHHhHHHHHHHH
Q 044696            7 IVSALNPGAVYVDTTSS-HPALAREIFKVARER----DCWAVDAPVSGGDIGARDGKLAIFAAG----DSAVVQWLTPLF   77 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~-~p~~~~~la~~~~~~----G~~~ldapV~g~~~~a~~g~l~i~~gG----~~~~~~~~~~~l   77 (220)
                      +.+.+.++++||-+... .+.  ..+.+.+...    |+.+..+-..+.-.....+.-.+.+|.    +.+..+++..+|
T Consensus        89 l~~~l~~~~~iv~l~nGi~~~--~~l~~~~~~~~v~~~~~~~~a~~~~p~~v~~~~~g~~~ig~~~~~~~~~~~~l~~~l  166 (312)
T 3hn2_A           89 IRPLVEEGTQILTLQNGLGNE--EALATLFGAERIIGGVAFLCSNRGEPGEVHHLGAGRIILGEFLPRDTGRIEELAAMF  166 (312)
T ss_dssp             HGGGCCTTCEEEECCSSSSHH--HHHHHHTCGGGEEEEEEEEECCBCSSSEEEECEEEEEEEEESSCCCSHHHHHHHHHH
T ss_pred             HHhhcCCCCEEEEecCCCCcH--HHHHHHCCCCcEEEEEEEeeeEEcCCcEEEECCCCeEEEecCCCCccHHHHHHHHHH
Confidence            34566778888776544 343  3445544322    222223333332111122222344543    345667788888


Q ss_pred             HHhcc-ceecCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcC--CCH-----HHHH
Q 044696           78 EVLGK-PTFMGGAGCGQSCKIANQIVVG---------------------ANLLGLSEGLVFADEAG--LDV-----RKWR  128 (220)
Q Consensus        78 ~~~~~-~~~~G~~G~a~~~Kl~~n~~~~---------------------~~~~~~aEa~~la~~~G--l~~-----~~~~  128 (220)
                      ..-+- +.+..+.-...--|++.|..+.                     ....++.|+..++++.|  ++.     +.++
T Consensus       167 ~~~g~~~~~~~di~~~~w~Kl~~N~~~n~l~al~~~~~G~l~~~~~~~~l~~~~~~E~~~va~a~G~~~~~~~~~~~~~~  246 (312)
T 3hn2_A          167 RQAGVDCRTTDDLKRARWEKLVWNIPFNGLCALLQQPVNLILARDVSRKLVRGIMLEVIAGANAQGLATFIADGYVDDML  246 (312)
T ss_dssp             HHTTCCEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSHHHHHHHHHHHHHHHHHHHTSCCSSCCCTTHHHHHH
T ss_pred             HhCCCCcEEChHHHHHHHHHHHHHHhHHHHHHHHCCCHHHHHhChhHHHHHHHHHHHHHHHHHHcCCccCCCHHHHHHHH
Confidence            87665 5444457778888888886532                     23456789999999999  552     2333


Q ss_pred             HHHhccCC-ChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCC
Q 044696          129 DAVKGGAA-GSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGD  202 (220)
Q Consensus       129 ~~l~~~~~-~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~  202 (220)
                      ++....+. .+.+++    .+.++..   .-++..   ...+++.+++.    |+++|..+.+.++.+.....|+
T Consensus       247 ~~~~~~~~~~sSM~q----D~~~gr~---tEid~i---~G~vv~~a~~~----gv~~P~~~~l~~ll~~~~~~~~  307 (312)
T 3hn2_A          247 EFTDAMGEYKPSMEI----DREEGRP---LEIAAI---FRTPLAYGARE----GIAMPRVEMLATLLEQATGEGH  307 (312)
T ss_dssp             HHHTTSCSCCCHHHH----HHHTTCC---CCHHHH---THHHHHHHHHT----TCCCHHHHHHHHHHHHHTTC--
T ss_pred             HHHhcCCCCCchHHH----HHHhCCC---ccHHHH---hhHHHHHHHHh----CCCCCHHHHHHHHHHHHHhccc
Confidence            33333221 122211    1222221   112222   46788999999    9999999999999887766665

>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}

Probab=96.11  E-value=0.14  Score=43.24  Aligned_cols=174  Identities=12%  Similarity=0.066  Sum_probs=99.5

Q ss_pred             hhhcCCCCCEEEecCC-CCHHHHHHHHHHHH-hc--CCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc
Q 044696            7 IVSALNPGAVYVDTTS-SHPALAREIFKVAR-ER--DCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK   82 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST-~~p~~~~~la~~~~-~~--G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~   82 (220)
                      +.+.+.++++||.++. +.++  ..+.+.+. +.  |+.+..+-.+|.......+.-.+.+|. .+..+++..+|..-+-
T Consensus       106 l~~~l~~~~~iv~~~nGi~~~--~~l~~~~~~~vl~g~~~~~a~~~gP~~~~~~~~g~~~ig~-~~~~~~l~~~l~~~~~  182 (318)
T 3hwr_A          106 MKPALAKSALVLSLQNGVENA--DTLRSLLEQEVAAAVVYVATEMAGPGHVRHHGRGELVIEP-TSHGANLAAIFAAAGV  182 (318)
T ss_dssp             HTTTSCTTCEEEEECSSSSHH--HHHHHHCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEECC-CTTTHHHHHHHHHTTC
T ss_pred             HHHhcCCCCEEEEeCCCCCcH--HHHHHHcCCcEEEEEEEEeEEEcCCeEEEEcCCceEEEcC-CHHHHHHHHHHHhCCC
Confidence            4456778888887654 4443  35555542 10  112222333332221122222334555 4455778888887666


Q ss_pred             -ceecCCCCHHHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHcCCCH-----HHHHHHHhccC
Q 044696           83 -PTFMGGAGCGQSCKIANQIVVG---------------------ANLLGLSEGLVFADEAGLDV-----RKWRDAVKGGA  135 (220)
Q Consensus        83 -~~~~G~~G~a~~~Kl~~n~~~~---------------------~~~~~~aEa~~la~~~Gl~~-----~~~~~~l~~~~  135 (220)
                       +++..++-...-.|++.|....                     .....+.|+..++++.|++.     +.+++++...+
T Consensus       183 ~~~~~~Di~~~~w~Kl~~N~~~n~l~al~~~~~g~l~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~~~~~~~  262 (318)
T 3hwr_A          183 PVETSDNVRGALWAKLILNCAYNALSAITQLPYGRLVRGEGVEAVMRDVMEECFAVARAEGVKLPDDVALAIRRIAETMP  262 (318)
T ss_dssp             CEEECSCHHHHHHHHHHHHHHHHHHHHHHTCCHHHHTTSTTHHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHHHHHHST
T ss_pred             CcEechHHHHHHHHHHHHHhhhhHHHHHHCCCHHHHhcChhHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHHHHHhcC
Confidence             5555567778999999886432                     23467789999999999874     23334443322


Q ss_pred             -CChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHH
Q 044696          136 -AGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAM  197 (220)
Q Consensus       136 -~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a  197 (220)
                       ..|.+++.    +.++..+   -++..   ...+++.+++.    |+++|..+...++.+..
T Consensus       263 ~~~sSM~qD----~~~gr~t---Eid~i---~G~vv~~a~~~----gv~tP~~~~l~~ll~~~  311 (318)
T 3hwr_A          263 RQSSSTAQD----LARGKRS---EIDHL---NGLIVRRGDAL----GIPVPANRVLHALVRLI  311 (318)
T ss_dssp             TCCCHHHHH----HHTTCCC---SGGGT---HHHHHHHHHHT----TCCCHHHHHHHHHHHHH
T ss_pred             CCCcHHHHH----HHcCChh---HHHHH---HHHHHHHHHHh----CCCCcHHHHHHHHHHHH
Confidence             11222221    1222211   22333   46788999999    99999999988777654

>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}

Probab=96.06  E-value=0.15  Score=43.00  Aligned_cols=172  Identities=14%  Similarity=0.024  Sum_probs=99.0

Q ss_pred             hhhcCCCCCEEEecCCC-CHHHHHHHHHHHHhcCCcEEEecCCCChHHhh------ccceeEEec----CCHHhHHHHHH
Q 044696            7 IVSALNPGAVYVDTTSS-HPALAREIFKVARERDCWAVDAPVSGGDIGAR------DGKLAIFAA----GDSAVVQWLTP   75 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~-~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~------~g~l~i~~g----G~~~~~~~~~~   75 (220)
                      +.+.+.++++||.+... .+.  +.+.+.+..  -+++.+|+.-+....+      .+.-.+.+|    .+.+..+++..
T Consensus        91 l~~~l~~~t~Iv~~~nGi~~~--~~l~~~~~~--~~vl~g~~~~~a~~~~pg~v~~~~~~~~~ig~~~~~~~~~~~~l~~  166 (320)
T 3i83_A           91 LRDAVAPDTGIVLISNGIDIE--PEVAAAFPD--NEVISGLAFIGVTRTAPGEIWHQAYGRLMLGNYPGGVSERVKTLAA  166 (320)
T ss_dssp             HTTSCCTTCEEEEECSSSSCS--HHHHHHSTT--SCEEEEEEEEEEEEEETTEEEEEEEEEEEEEESSSCCCHHHHHHHH
T ss_pred             HHhhcCCCCEEEEeCCCCChH--HHHHHHCCC--CcEEEEEEEeceEEcCCCEEEECCCCEEEEecCCCCccHHHHHHHH
Confidence            34456678888876543 222  344444432  2567777653211111      112234454    34566778888


Q ss_pred             HHHHhcc-ceecCCCCHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHcCCCH-----HHHHH
Q 044696           76 LFEVLGK-PTFMGGAGCGQSCKIANQIVV--------------------GANLLGLSEGLVFADEAGLDV-----RKWRD  129 (220)
Q Consensus        76 ~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~--------------------~~~~~~~aEa~~la~~~Gl~~-----~~~~~  129 (220)
                      +|..-+- +.+..+.-...-.|++.|..+                    .....++.|+..++++.|++.     +.+++
T Consensus       167 ~l~~~~~~~~~~~di~~~~w~Kl~~N~~~N~ltal~~~~~g~~~~~~~~~l~~~~~~E~~~va~a~G~~l~~~~~~~~~~  246 (320)
T 3i83_A          167 AFEEAGIDGIATENITTARWQKCVWNAAFNPLSVLSGGLDTLDILSTQEGFVRAIMQEIRAVAAANGHPLPEDIVEKNVA  246 (320)
T ss_dssp             HHHHTTSCEEECSCHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHCHHHHHHHHHHHHHHHHHTTCCCCTTHHHHHHH
T ss_pred             HHHhCCCCceECHHHHHHHHHHHHHHHhhhHHHHHHCCCHHHHHhCcHHHHHHHHHHHHHHHHHHcCCCCChHHHHHHHH
Confidence            8887666 655566788899999887532                    123467889999999999874     23333


Q ss_pred             HHhccCC-ChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696          130 AVKGGAA-GSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA  196 (220)
Q Consensus       130 ~l~~~~~-~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~  196 (220)
                      +....+. .+.+++    .+.++..   .-++..   ...+++.+++.    |+++|..+.+.++.+.
T Consensus       247 ~~~~~~~~~sSM~q----D~~~gr~---tEid~i---~G~vv~~a~~~----gv~~P~~~~l~~~l~~  300 (320)
T 3i83_A          247 STYKMPPYKTSMLV----DFEAGQP---METEVI---LGNAVRAGRRT----RVAIPHLESVYALMKL  300 (320)
T ss_dssp             HHHHSCCCCCHHHH----HHHHTCC---CCHHHH---THHHHHHHHHT----TCCCHHHHHHHHHHHH
T ss_pred             HHhcCCCCCCcHHH----HHHhCCC---chHHHH---ccHHHHHHHHh----CCCCCHHHHHHHHHHH
Confidence            3332221 111111    1111211   112222   36788999999    9999999998776654

>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}

Probab=95.49  E-value=0.091  Score=44.60  Aligned_cols=119  Identities=13%  Similarity=0.041  Sum_probs=73.4

Q ss_pred             CHHhHHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHH---------------------HHHHHHHHHHHHHHHHHcCCC
Q 044696           66 DSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIV---------------------VGANLLGLSEGLVFADEAGLD  123 (220)
Q Consensus        66 ~~~~~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~---------------------~~~~~~~~aEa~~la~~~Gl~  123 (220)
                      +.+..+++..+|..-+- +.+.-+.-...-.|++.|..                     ......++.|+..++++.|++
T Consensus       175 ~~~~~~~l~~~l~~~g~~~~~~~di~~~~w~Kl~~na~~N~l~al~~~~~g~~~~~~~~~~l~~~~~~E~~~va~a~G~~  254 (335)
T 3ghy_A          175 ASPRLASIAALFGRAGLQAECSEAIQRDIWFKLWGNMTMNPVSVLTGATCDRILDDPLVSAFCLAVMAEAKAIGARIGCP  254 (335)
T ss_dssp             CCHHHHHHHHHHHHTTCEEEECSCHHHHHHHHHHTTTTHHHHHHHHCCCHHHHHHSHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred             cCHHHHHHHHHHHhCCCCcEeCchHHHHHHHHHHHHhhhhHHHHHhCCChHHHhcChHHHHHHHHHHHHHHHHHHHcCCC
Confidence            34566778888887665 55545566667778765542                     234567899999999999987


Q ss_pred             HH----HHHHHHhccCCChHHHHhhhhhhccccCCCCc---hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696          124 VR----KWRDAVKGGAAGSMAMELYGERMIEKDFRPGG---FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA  196 (220)
Q Consensus       124 ~~----~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f---~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~  196 (220)
                      +.    .++++....+..       .+.|. .|+..+-   -++..   ...+++.+++.    |+++|..+.+.++.+.
T Consensus       255 ~~~~~~~~~~~~~~~~~~-------~sSM~-qD~~~gr~~tEid~i---~G~vv~~a~~~----gv~~P~~~~l~~li~~  319 (335)
T 3ghy_A          255 IEQSGEARSAVTRQLGAF-------KTSML-QDAEAGRGPLEIDAL---VASVREIGLHV----GVPTPQIDTLLGLVRL  319 (335)
T ss_dssp             CCSCHHHHHHHHHTTCSC-------CCTTT-C-----CCCCCHHHH---THHHHHHHHHH----TCCCHHHHHHHHHHHH
T ss_pred             CCccHHHHHHHHhccCCC-------CcHHH-HHHHcCCCCchHHHH---hhHHHHHHHHh----CCCCCHHHHHHHHHHH
Confidence            53    333333322111       12222 1222221   13333   56788999999    9999999999888775


Q ss_pred             HHH
Q 044696          197 MVA  199 (220)
Q Consensus       197 a~~  199 (220)
                      ..+
T Consensus       320 ~e~  322 (335)
T 3ghy_A          320 HAQ  322 (335)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            433

>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6

Probab=92.27  E-value=0.3  Score=41.64  Aligned_cols=117  Identities=15%  Similarity=0.030  Sum_probs=64.8

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEE-ecCCCChHH------hhccceeEEe---cCCHHhHHHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVD-APVSGGDIG------ARDGKLAIFA---AGDSAVVQWLTP   75 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ld-apV~g~~~~------a~~g~l~i~~---gG~~~~~~~~~~   75 (220)
                      .+.+.+++|++|+|++++..    .+.+.....++.|+- .| +|....      ...|...+++   +.+.++++.++.
T Consensus        92 ~i~~~l~~~~ivi~~~gv~~----~~~~~~~~~~~~vv~~~P-~gp~~a~~~l~~~G~g~~~ii~~~~~~~~~a~~~~~~  166 (338)
T 1np3_A           92 EIEPNLKKGATLAFAHGFSI----HYNQVVPRADLDVIMIAP-KAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALS  166 (338)
T ss_dssp             HTGGGCCTTCEEEESCCHHH----HTTSSCCCTTCEEEEEEE-SSCSHHHHHHHHTTCCCCEEEEEEECSSSCHHHHHHH
T ss_pred             HHHhhCCCCCEEEEcCCchh----HHHhhcCCCCcEEEeccC-CCCchhHHHHHhccCCCeEEEEecCCCCHHHHHHHHH
Confidence            35567889999999865433    122211234566654 46 443221      2235555544   345678899999


Q ss_pred             HHHHhcc-c---eecCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCHHHH
Q 044696           76 LFEVLGK-P---TFMGGAGCGQSCKIANQ-IVVGANLLGLSEGLVFADEAGLDVRKW  127 (220)
Q Consensus        76 ~l~~~~~-~---~~~G~~G~a~~~Kl~~n-~~~~~~~~~~aEa~~la~~~Gl~~~~~  127 (220)
                      +++.+|. .   +.+.....-.......+ .+..+....++.++....+.|++++..
T Consensus       167 l~~~lG~~~agv~~~~~~~~~~~~~~~s~~~l~G~lp~~ia~~~e~l~~~Gl~~~~a  223 (338)
T 1np3_A          167 YACGVGGGRTGIIETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMA  223 (338)
T ss_dssp             HHHHTTHHHHCEEECCHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHTTCCHHHH
T ss_pred             HHHHcCCCccceEeechhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHcCCCHHHH
Confidence            9999997 3   34432222333334444 233333444444454555899998754

>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}

Probab=91.04  E-value=2.9  Score=34.41  Aligned_cols=121  Identities=13%  Similarity=0.042  Sum_probs=73.0

Q ss_pred             CCHHhHHHHHHHHHHhcc-ceecCCCCHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHcCCC
Q 044696           65 GDSAVVQWLTPLFEVLGK-PTFMGGAGCGQSCKIANQIVVG--------------------ANLLGLSEGLVFADEAGLD  123 (220)
Q Consensus        65 G~~~~~~~~~~~l~~~~~-~~~~G~~G~a~~~Kl~~n~~~~--------------------~~~~~~aEa~~la~~~Gl~  123 (220)
                      |+.+..+++..+|..-+- +.+.-+.-...--|++.|..+.                    ....++.|+..++++.|++
T Consensus       137 ~~~~~~~~l~~~l~~~~~~~~~~~di~~~~w~Kl~~N~~inl~al~~~~~g~~l~~~~~~~l~~~~~~E~~~va~a~G~~  216 (294)
T 3g17_A          137 QDNALTRQFRDLVQDSQIDIVLEANIQQAIWYKLLVNLGINSITALGRQTVAIMHNPEIRILCRQLLLDGCRVAQAEGLN  216 (294)
T ss_dssp             ECSHHHHHHHHHTTTSSCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTSCGGGGGSHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             CccHHHHHHHHHHHhCCCceEEChHHHHHHHHHHHHHHHHHHHHHHCCChHHHHcCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence            455556667777766444 4444567778889998887322                    1235678999999999976


Q ss_pred             H--HHHHHHHh---cc-C-CChHHHHhhhhhhccccCCCCchhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHH
Q 044696          124 V--RKWRDAVK---GG-A-AGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSA  196 (220)
Q Consensus       124 ~--~~~~~~l~---~~-~-~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~  196 (220)
                      .  +.+.+.+.   .. + ..|.+++.    +.++..+   -++..   ...+++.+++.    |+++|..+...++.+.
T Consensus       217 l~~~~~~~~~~~~~~~~~~~~sSM~qD----~~~gr~t---Eid~i---~G~vv~~a~~~----gv~~P~~~~l~~ll~~  282 (294)
T 3g17_A          217 FSEQTVDTIMTIYQGYPDEMGTSMYYD----IVHQQPL---EVEAI---QGFIYRRAREH----NLDTPYLDTIYSFLRA  282 (294)
T ss_dssp             CCHHHHHHHHHHHHTSCTTCCCHHHHH----HHTTCCC---SGGGT---HHHHHHHHHHT----TCCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhhcCCCCCCcHHHH----HHcCCCc---cHHHh---hhHHHHHHHHh----CCCCChHHHHHHHHHH
Confidence            3  22333322   11 1 11222211    1222211   12222   46788999999    9999999999888775


Q ss_pred             HHH
Q 044696          197 MVA  199 (220)
Q Consensus       197 a~~  199 (220)
                      ..+
T Consensus       283 ~e~  285 (294)
T 3g17_A          283 YQQ  285 (294)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            544

>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6

Probab=88.58  E-value=3.8  Score=36.46  Aligned_cols=105  Identities=13%  Similarity=0.068  Sum_probs=79.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHc------CCCHHHHHHHHhccC-CChHHHHhhhhhhccc-cCC---CCc--h
Q 044696           92 GQSCKIANQIVVGANLLGLSEGLVFADEA------GLDVRKWRDAVKGGA-AGSMAMELYGERMIEK-DFR---PGG--F  158 (220)
Q Consensus        92 a~~~Kl~~n~~~~~~~~~~aEa~~la~~~------Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~-~~~---~~f--~  158 (220)
                      ...++-+.+.+.++-+.++++++.+.+++      +||...+..+++.+. -.|.++....+...++ +..   +.|  .
T Consensus       323 ~~~~~~~~~al~~~~~~~yaqg~~~~~~a~~~~~w~l~~~~~a~~wr~gciir~~~l~~i~~a~~~~~~~~~l~~~~~~~  402 (478)
T 1pgj_A          323 GPEIKQLYDSVCIAIISCYAQMFQCLREMDKVHNFGLNLPATIATFRAGCILQGYLLKPMTEAFEKNPNISNLMCAFQTE  402 (478)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHTTSSSSTTCBTTHHHHHHHHHHCTTCSCTTGGGHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHcCCceeeHHHHHHHHHHHhcCCChhhHHHHHHHH
Confidence            56788889999999999999999998874      999999999998766 4566665543333221 110   223  3


Q ss_pred             hhHHHHHHHHHHHH-HhhcccCCCCCccHHHHHHHHHHHHHHC
Q 044696          159 AEYMVKDMGMGVDV-VEESEDERVVVLPGAALGKQLFSAMVAN  200 (220)
Q Consensus       159 ~~~~~KD~~~~~~~-a~~~~~~~g~~~p~~~~~~~~~~~a~~~  200 (220)
                      +.......|.++.. +-..    |+|.|....+..+|+.....
T Consensus       403 ~~~~~~~~r~~v~~~~~~~----g~~~p~~~~~l~y~d~~~~~  441 (478)
T 1pgj_A          403 IRAGLQNYRDMVALITSKL----EVSIPVLSASLNYVTAMFTP  441 (478)
T ss_dssp             HHHHHHHHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHHHHHHHHc----CCChHHHHHHHHHHHHhccc
Confidence            44556778888888 9999    99999999999999977554

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=86.25  E-value=0.12  Score=43.16  Aligned_cols=63  Identities=21%  Similarity=0.292  Sum_probs=45.4

Q ss_pred             hhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEec-CCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            7 IVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAP-VSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         7 i~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldap-V~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      .++.+++|.++||++.......  + +.+.++|+.++++| +.|...++..+++.         ++.+.|+|..+.
T Consensus       232 ~~~~mk~g~~lin~a~g~~~~~--~-~~a~~~G~~~i~~pg~~g~v~~a~a~~l~---------~~~~~~~l~~~~  295 (300)
T 2rir_A          232 VLSSMTPKTLILDLASRPGGTD--F-KYAEKQGIKALLAPGLPGIVAPKTAGQIL---------ANVLSKLLAEIQ  295 (300)
T ss_dssp             HHTTSCTTCEEEECSSTTCSBC--H-HHHHHHTCEEEECCCHHHHHCHHHHHHHH---------HHHHHHHHHHHH
T ss_pred             HHHhCCCCCEEEEEeCCCCCcC--H-HHHHHCCCEEEECCCCCCcHHHHHHHHHH---------HHHHHHHHHHhc
Confidence            5677899999999998644331  3 45667899999999 88877677666653         456677766553

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=84.12  E-value=0.71  Score=38.64  Aligned_cols=47  Identities=9%  Similarity=0.015  Sum_probs=40.4

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDI   52 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~   52 (220)
                      ..++.+++|.++||+|+..+-..+++.+.+++.++......|+..-+
T Consensus       194 ~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~EP  240 (290)
T 3gvx_A          194 RLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWNEP  240 (290)
T ss_dssp             HHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTT
T ss_pred             HHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccCCc
Confidence            56788999999999999999999999999999888876666766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	220
d1vpda1	133	a.100.1.1 (A:164-296) Hydroxyisobutyrate dehydroge	9e-23
d3cuma1	134	a.100.1.1 (A:163-296) Hydroxyisobutyrate dehydroge	6e-21
d2cvza1	132	a.100.1.1 (A:158-289) Hydroxyisobutyrate dehydroge	2e-18
d1vpda2	161	c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase	9e-13
d3cuma2	162	c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase	3e-12
d2cvza2	156	c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase	2e-08
d2b0ja2	242	c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopt	7e-06
d2pv7a2	152	c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {	8e-06
d1pgja2	178	c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase	1e-04
d2i76a2	153	c.2.1.6 (A:2-154) Hypothetical protein TM1727 {The	7e-04
d1i36a2	152	c.2.1.6 (A:1-152) Conserved hypothetical protein M	0.001

>d1vpda1 a.100.1.1 (A:164-296) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Length = 133

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

 Score = 87.4 bits (216), Expect = 9e-23
 Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 4/130 (3%)

Query: 90  GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMI 149
           G G   K+ANQ++V  N+  +SE L  A +AG++      A++GG AGS  ++     ++
Sbjct: 3   GAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVM 62

Query: 150 EKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQG 209
           +++F+PG   +  +KD+   +D            LP  A   ++  A+ A+G G      
Sbjct: 63  DRNFKPGFRIDLHIKDLANALDTSHGVG----AQLPLTAAVMEMMQALRADGHGNDDHSA 118

Query: 210 LVSVIERING 219
           L    E++  
Sbjct: 119 LACYYEKLAK 128

>d3cuma1 a.100.1.1 (A:163-296) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 134

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 82.5 bits (203), Expect = 6e-21
 Identities = 25/134 (18%), Positives = 56/134 (41%), Gaps = 11/134 (8%)

Query: 89  AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGER- 147
            G GQ  K+ N  ++   ++G +E +      GL+ +   + ++  + G+ A+E+Y    
Sbjct: 2   DGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWP 61

Query: 148 ------MIEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANG 201
                    +D+  G  A+ M KD+G+  +  + S        P  +L   L+  ++  G
Sbjct: 62  GVMENAPASRDYSGGFMAQLMAKDLGLAQEAAQASA----SSTPMGSLALSLYRLLLKQG 117

Query: 202 DGKFGTQGLVSVIE 215
             +     +  + +
Sbjct: 118 YAERDFSVVQKLFD 131

>d2cvza1 a.100.1.1 (A:158-289) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 132

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 76.3 bits (187), Expect = 2e-18
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 5/131 (3%)

Query: 90  GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELY-GERM 148
           G G + K  N  ++  NL    EGL+   + G+   K  + +   +  S A E    +R+
Sbjct: 2   GAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRSNATENLIPQRV 61

Query: 149 IEKDFRPGGFAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQ 208
           + + F        +VKD+G+ + V++  +       P   L ++++              
Sbjct: 62  LTRAFPKTFALGLLVKDLGIAMGVLDGEK----APSPLLRLAREVYEMAKRELGPDADHV 117

Query: 209 GLVSVIERING 219
             + ++ER  G
Sbjct: 118 EALRLLERWGG 128

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} Length = 161

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

 Score = 61.7 bits (149), Expect = 9e-13
 Identities = 28/85 (32%), Positives = 42/85 (49%)

Query: 1   ALDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLA 60
           AL  +GI+    PG V +D +S  P  +REI    + +    +DAPVSGG+  A DG L+
Sbjct: 74  ALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLS 133

Query: 61  IFAAGDSAVVQWLTPLFEVLGKPTF 85
           +   GD A+      L + +     
Sbjct: 134 VMVGGDKAIFDKYYDLMKAMAGSVV 158

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 162

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 60.3 bits (145), Expect = 3e-12
 Identities = 33/84 (39%), Positives = 49/84 (58%)

Query: 2   LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAI 61
           LD DG+++ + PG + ++ ++  P  AR+I   ARER    +DAPVSGG  GA  G L  
Sbjct: 76  LDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTF 135

Query: 62  FAAGDSAVVQWLTPLFEVLGKPTF 85
              GD+  ++   PLFE +G+  F
Sbjct: 136 MVGGDAEALEKARPLFEAMGRNIF 159

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 156

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 49.9 bits (118), Expect = 2e-08
 Identities = 26/84 (30%), Positives = 38/84 (45%)

Query: 4   PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFA 63
            + +   L  G  +VD TS  P  +R + +  RE+    +DAPVSGG  GA  G L +  
Sbjct: 72  AEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVML 131

Query: 64  AGDSAVVQWLTPLFEVLGKPTFMG 87
            G    V+ + P      K   +G
Sbjct: 132 GGPEEAVERVRPFLAYAKKVVHVG 155

>d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 5,10-methenyltetrahydromethanopterin hydrogenase, HMD
species: Archaeon Methanocaldococcus jannaschii [TaxId: 2190]

 Score = 43.0 bits (101), Expect = 7e-06
 Identities = 11/81 (13%), Positives = 21/81 (25%), Gaps = 1/81 (1%)

Query: 5   DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAA 64
                A+  GA+     +       +IFK     D   + +   G     +         
Sbjct: 160 KKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDL-NITSYHPGCVPEMKGQVYIAEGY 218

Query: 65  GDSAVVQWLTPLFEVLGKPTF 85
                V  L  + ++     F
Sbjct: 219 ASEEAVNKLYEIGKIARGKAF 239

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} Length = 152

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

 Score = 42.2 bits (98), Expect = 8e-06
 Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 12  NPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG-DSAVV 70
               +  D TS       ++ +V           P+ G DI +   ++ +   G      
Sbjct: 78  TENMLLADLTSVKREPLAKMLEVHTGA--VLGLHPMFGADIASMAKQVVVRCDGRFPERY 135

Query: 71  QWLTPLFEVLGK 82
           +WL    ++ G 
Sbjct: 136 EWLLEQIQIWGA 147

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Length = 178

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

 Score = 38.8 bits (89), Expect = 1e-04
 Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 1/89 (1%)

Query: 6   GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG 65
            +      G + VDT ++H        +         +   +SGG+ GAR G    F  G
Sbjct: 88  QLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGPA-FFPGG 146

Query: 66  DSAVVQWLTPLFEVLGKPTFMGGAGCGQS 94
             +V + + P+ E        G      +
Sbjct: 147 TLSVWEEIRPIVEAAAAKADDGRPCVTMN 175

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} Length = 153

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

 Score = 36.5 bits (83), Expect = 7e-04
 Identities = 5/50 (10%), Positives = 12/50 (24%)

Query: 36  RERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGKPTF 85
                    +  S         ++     GD   +  +  + E +    F
Sbjct: 98  GRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISGKYF 147

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Length = 152

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

 Score = 36.0 bits (82), Expect = 0.001
 Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 2/67 (2%)

Query: 10  ALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAV 69
             +   +YVD  +  P   R    +  +     VDA + G           I +  D+  
Sbjct: 77  GRHVRGIYVDINNISPETVRMASSLIEKGGF--VDAAIMGSVRRKGADIRIIASGRDAEE 134

Query: 70  VQWLTPL 76
              L   
Sbjct: 135 FMKLNRY 141

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	220
d1vpda1	133	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	99.97
d2cvza1	132	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	99.97
d3cuma1	134	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	99.96
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	99.84
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	99.83
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	99.83
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	99.76
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	99.74
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	99.16
d2b0ja2	242	5,10-methenyltetrahydromethanopterin hydrogenase,	98.8
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	98.54
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	98.23
d1i36a1	112	Conserved hypothetical protein MTH1747 {Archaeon M	98.18
d1mv8a1	98	GDP-mannose 6-dehydrogenase, middle domain {Pseudo	98.15
d2pgda1	297	6-phosphogluconate dehydrogenase (6PGD) {Sheep (Ov	98.06
d1dlja1	98	UDP-glucose dehydrogenase (UDPGDH), middle domain	97.92
d1pgja1	300	6-phosphogluconate dehydrogenase (6PGD) {Trypanoso	97.92
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	97.69
d2pgda1	297	6-phosphogluconate dehydrogenase (6PGD) {Sheep (Ov	97.03
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.8
d1pgja1	300	6-phosphogluconate dehydrogenase (6PGD) {Trypanoso	96.55
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.69
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	89.09

>d1vpda1 a.100.1.1 (A:164-296) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.97  E-value=1.4e-31  Score=202.45  Aligned_cols=129  Identities=27%  Similarity=0.451  Sum_probs=126.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHHHHHHH
Q 044696           88 GAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMG  167 (220)
Q Consensus        88 ~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~  167 (220)
                      ++|+|+.+||+||++.++++.+++|++.++++.|||+++++++++.+++.|++++.+.|++.+++|+|+|+++++.||++
T Consensus         1 dvG~g~~~Kl~nN~l~~~~~~~~aEal~la~~~Gid~~~~~~~l~~~~~~S~~~~~~~~~~~~~~~~~~f~~~l~~KDl~   80 (133)
T d1vpda1           1 DIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLA   80 (133)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCCHHHHHHHHHHHTTCCCCSSBHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhccccchhhhhccchhhhccCCCCchHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696          168 MGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK  220 (220)
Q Consensus       168 ~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~  220 (220)
                      ++.+++++.    |+|+|+++.+.++|+.+.++|+|++|+++|++++++.+|+
T Consensus        81 l~~~~a~~~----~~~~p~~~~~~~~~~~a~~~G~~~~D~s~i~~~~~~~~~~  129 (133)
T d1vpda1          81 NALDTSHGV----GAQLPLTAAVMEMMQALRADGHGNDDHSALACYYEKLAKV  129 (133)
T ss_dssp             HHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGHHHHHHHHHTC
T ss_pred             HHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhCC
Confidence            999999999    9999999999999999999999999999999999998875

>d2cvza1 a.100.1.1 (A:158-289) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.97  E-value=9.4e-31  Score=197.60  Aligned_cols=128  Identities=20%  Similarity=0.296  Sum_probs=124.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-hhccccCCCCchhhHHHHHHH
Q 044696           89 AGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-RMIEKDFRPGGFAEYMVKDMG  167 (220)
Q Consensus        89 ~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-~~~~~~~~~~f~~~~~~KD~~  167 (220)
                      +|+|+++|++||++.++++.+++|++.++++.|||+++++++++.+++.|++++.+.| ++.+++|+|+|+++++.||++
T Consensus         1 VG~g~~~Kl~nN~l~~~~~~~~aEal~la~~~Gld~~~~~~vl~~s~~~s~~~~~~~p~~~~~~~~~~~f~~~~~~KDl~   80 (132)
T d2cvza1           1 VGAGHAVKAINNALLAVNLWAAGEGLLALVKQGVSAEKALEVINASSGRSNATENLIPQRVLTRAFPKTFALGLLVKDLG   80 (132)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHTTSTTCBHHHHHTHHHHTTTSCCCCSSBHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhhhhhhhhhhhhhHHHHHHhhhhhhHHHHHhhHHH
Confidence            5899999999999999999999999999999999999999999999999999999988 588999999999999999999


Q ss_pred             HHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcCC
Q 044696          168 MGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERINGK  220 (220)
Q Consensus       168 ~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~~  220 (220)
                      ++.+.+++.    |+|+|+++.++++|+.+.+.|+|++|+++|++++++++|+
T Consensus        81 l~~~~a~~~----g~~~pl~~~~~~~~~~a~~~g~~~~D~s~i~~~~e~~~g~  129 (132)
T d2cvza1          81 IAMGVLDGE----KAPSPLLRLAREVYEMAKRELGPDADHVEALRLLERWGGV  129 (132)
T ss_dssp             HHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHCTTSBGGGGHHHHHHHHTS
T ss_pred             HHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCC
Confidence            999999999    9999999999999999999999999999999999999885

>d3cuma1 a.100.1.1 (A:163-296) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.96  E-value=3.2e-29  Score=189.53  Aligned_cols=125  Identities=20%  Similarity=0.407  Sum_probs=119.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhh-------hhccccCCCCchhh
Q 044696           88 GAGCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGE-------RMIEKDFRPGGFAE  160 (220)
Q Consensus        88 ~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~-------~~~~~~~~~~f~~~  160 (220)
                      |.|+|+.+||+||++.++++.+++|++.++++.|||+++++++|+.+++.|++++.+.+       .+.+++|+++|+++
T Consensus         1 P~GsG~~~Kl~~N~l~~~~~~a~aEal~la~~~Gld~~~~~eil~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~f~~~   80 (134)
T d3cuma1           1 PDGAGQVAKVCNNQLLAVLMIGTAEAMALGVANGLEAKVLAEIMRRSSGGNWALEVYNPWPGVMENAPASRDYSGGFMAQ   80 (134)
T ss_dssp             STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTCCHHHHHCCCSTTSSTTSGGGGTTCSSSBHH
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHhcccchhhhhhhhhhhhccchhhhcCCCCCCcchH
Confidence            57999999999999999999999999999999999999999999999999999987643       47788999999999


Q ss_pred             HHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHH
Q 044696          161 YMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIER  216 (220)
Q Consensus       161 ~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~  216 (220)
                      ++.||++++++++++.    |+|+|+++.++++|+.+.++|+|++|+++|+++|++
T Consensus        81 l~~KDl~l~~~~a~~~----g~~~p~~~~a~~~~~~a~~~G~g~~D~s~i~~~~e~  132 (134)
T d3cuma1          81 LMAKDLGLAQEAAQAS----ASSTPMGSLALSLYRLLLKQGYAERDFSVVQKLFDP  132 (134)
T ss_dssp             HHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHHTTCTTSBGGGGHHHHCT
T ss_pred             HHHHHHHHHHHHHHHc----CCCChHHHHHHHHHHHHHHcCCCCCCHHHHHHHHcC
Confidence            9999999999999999    999999999999999999999999999999999875

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.84  E-value=1e-21  Score=151.95  Aligned_cols=86  Identities=33%  Similarity=0.555  Sum_probs=83.7

Q ss_pred             CCccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhc
Q 044696            2 LDPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLG   81 (220)
Q Consensus         2 ~g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~   81 (220)
                      ++++++++.+.+|++|||+||++|++++++++.++++|++|+|+||+|+|+.++.|++++|+||+++++++++|+|+.++
T Consensus        75 ~~~~~~~~~~~~g~iiid~sT~~p~~~~~~~~~~~~~g~~~vdapv~gg~~~a~~g~l~~~~gG~~~~~~~~~~il~~~~  154 (161)
T d1vpda2          75 LGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAKGVEMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMA  154 (161)
T ss_dssp             HSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTTTCEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHHHHHHTTE
T ss_pred             hCCcchhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCceecccccCChhHHhcCCeEEEEcCCHHHHHHHHHHHHHhc
Confidence            57789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             c-ceecC
Q 044696           82 K-PTFMG   87 (220)
Q Consensus        82 ~-~~~~G   87 (220)
                      + ++|+|
T Consensus       155 ~~i~~~G  161 (161)
T d1vpda2         155 GSVVHTG  161 (161)
T ss_dssp             EEEEEEE
T ss_pred             CceEECC
Confidence            9 99997

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=6.2e-22  Score=152.47  Aligned_cols=84  Identities=31%  Similarity=0.546  Sum_probs=80.9

Q ss_pred             ccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-
Q 044696            4 PDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-   82 (220)
Q Consensus         4 ~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-   82 (220)
                      .+++++.+.+|++|||+||++|+++++++++++++|++||||||+|+|+.|++|+|++|+||++++|++++|+|+ +++ 
T Consensus        72 ~~~l~~~~~~~~~iid~sT~~p~~~~~~~~~~~~~gi~~ldapVsGg~~~A~~G~L~~~vgG~~~~~~~~~p~L~-~~~~  150 (156)
T d2cvza2          72 AEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDAPVSGGTSGAEAGTLTVMLGGPEEAVERVRPFLA-YAKK  150 (156)
T ss_dssp             HHHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTTTEEEEECCEESHHHHHHHTCEEEEEESCHHHHHHHGGGCT-TEEE
T ss_pred             hccccccccccccccccccCCHHHHHHHHHHHHHcCCeEEeccccCchhhhccCCEEEEEeCCHHHHHHHHHHHH-hcCc
Confidence            467889999999999999999999999999999999999999999999999999999999999999999999995 999 


Q ss_pred             ceecCC
Q 044696           83 PTFMGG   88 (220)
Q Consensus        83 ~~~~G~   88 (220)
                      ++|+||
T Consensus       151 v~~~GP  156 (156)
T d2cvza2         151 VVHVGP  156 (156)
T ss_dssp             EEEEES
T ss_pred             CEEeCc
Confidence            999996

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.83  E-value=2.2e-21  Score=150.26  Aligned_cols=85  Identities=38%  Similarity=0.682  Sum_probs=82.2

Q ss_pred             CccchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc
Q 044696            3 DPDGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK   82 (220)
Q Consensus         3 g~~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~   82 (220)
                      ..+++.+.+.+|++|||+||++|++++++++.++++|++|+||||+|+|.+|++|++++|+||++++|++++|+|+.|++
T Consensus        77 ~~~~~~~~l~~g~iiid~st~~p~~~~~~~~~~~~~gi~~~dapv~Gg~~~a~~G~l~~~~gG~~~~~~~~~~il~~~~~  156 (162)
T d3cuma2          77 DDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAMLDAPVSGGTAGAAAGTLTFMVGGDAEALEKARPLFEAMGR  156 (162)
T ss_dssp             STTCHHHHSCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEESCHHHHHHTCEEEEEESCHHHHHHHHHHHHHHEE
T ss_pred             ccccccccCCCCCEEEECCCCCHHHHHHHHHHHHHCCCcEEecccccCccccccCCeEEEecCCHHHHHHHHHHHHHHcC
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             -ceecC
Q 044696           83 -PTFMG   87 (220)
Q Consensus        83 -~~~~G   87 (220)
                       ++|+|
T Consensus       157 ~v~~~G  162 (162)
T d3cuma2         157 NIFHAG  162 (162)
T ss_dssp             EEEEEE
T ss_pred             ccEECc
Confidence             99997

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=99.76  E-value=2.4e-19  Score=140.40  Aligned_cols=79  Identities=20%  Similarity=0.340  Sum_probs=75.8

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P   83 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~   83 (220)
                      +++++.+.+|++|||+||++|++++++++++.++|++|+|+||+|++..|++|+ ++|+||++++|++++|+|+.|+. +
T Consensus        85 ~~l~~~~~~g~iiid~sT~~~~~~~~~~~~~~~~g~~~ldapvsGg~~~A~~G~-~~~~gG~~~~~~~~~~il~~~~~kv  163 (176)
T d2pgda2          85 EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFVGSGVSGGEDGARYGP-SLMPGGNKEAWPHIKAIFQGIAAKV  163 (176)
T ss_dssp             HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEESHHHHHHHCC-EEEEEECTTTHHHHHHHHHHHSCBC
T ss_pred             HHHHhccccCcEEEecCcchhHHHHHHHHHHHhcCCceeccccccCcccccCCc-EEEcCCCHHHHHHHHHHHHHHhccc
Confidence            478889999999999999999999999999999999999999999999999999 89999999999999999999998 6


Q ss_pred             e
Q 044696           84 T   84 (220)
Q Consensus        84 ~   84 (220)
                      .
T Consensus       164 ~  164 (176)
T d2pgda2         164 G  164 (176)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.74  E-value=1.5e-18  Score=135.80  Aligned_cols=86  Identities=23%  Similarity=0.341  Sum_probs=81.7

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT   84 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~   84 (220)
                      ++...+.+|+++||+||++|+.++++++++.+++++|+|+||+|++..|++|+ ++|+||++++|++++|+|+.+++ +.
T Consensus        88 ~~~~~~~~~~iii~~st~~~~~~~~~~~~l~~~~~~~ldapv~g~~~~a~~g~-~~mvgG~~~~~~~v~pil~~~~~~~~  166 (178)
T d1pgja2          88 QLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGISGGEEGARKGP-AFFPGGTLSVWEEIRPIVEAAAAKAD  166 (178)
T ss_dssp             HHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEESHHHHHHHCC-EEEEEECHHHHHHHHHHHHHHSCBCT
T ss_pred             hhhhhccccceecccCccchhHHHHHHHHHhhcceeEecccccCCcchhcCCc-EEEeeCCHHHHHHHHHHHHHHhcccc
Confidence            56677899999999999999999999999999999999999999999999998 88999999999999999999998 88


Q ss_pred             ----ecCCCCHH
Q 044696           85 ----FMGGAGCG   92 (220)
Q Consensus        85 ----~~G~~G~a   92 (220)
                          |||+.|+|
T Consensus       167 ~~~~~~g~~G~G  178 (178)
T d1pgja2         167 DGRPCVTMNGSG  178 (178)
T ss_dssp             TSCBSCCCCCST
T ss_pred             CCCCccCCCCCC
Confidence                99999875

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=99.16  E-value=2.5e-11  Score=91.71  Aligned_cols=70  Identities=19%  Similarity=0.152  Sum_probs=58.4

Q ss_pred             CCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ceecCC
Q 044696           13 PGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PTFMGG   88 (220)
Q Consensus        13 ~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~~~G~   88 (220)
                      .++++||+||++|++++++++.+++.  .|+|+||+|+++.++.+++.++.|++.+.+++    |+.++. +.|+|+
T Consensus        80 ~~~~~id~st~~p~~~~~l~~~~~~~--~~~d~~v~g~~~~~~~~~~~~~~G~~~~~~~~----l~~~g~~i~~~G~  150 (152)
T d1i36a2          80 VRGIYVDINNISPETVRMASSLIEKG--GFVDAAIMGSVRRKGADIRIIASGRDAEEFMK----LNRYGLNIEVRGR  150 (152)
T ss_dssp             CCSEEEECSCCCHHHHHHHHHHCSSS--EEEEEEECSCHHHHGGGCEEEEESTTHHHHHG----GGGGTCEEEECSS
T ss_pred             CCceeeccCcCCHHHHHHHHHHHhcc--CCCcccccCCcccccCCcEEEEECCCHHHHHH----HHHcCCeeeEcCC
Confidence            57899999999999999999998654  49999999999999888876555555555443    788999 999996

>d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 5,10-methenyltetrahydromethanopterin hydrogenase, HMD
species: Archaeon Methanocaldococcus jannaschii [TaxId: 2190]

Probab=98.80  E-value=4.2e-09  Score=85.19  Aligned_cols=81  Identities=12%  Similarity=0.007  Sum_probs=70.5

Q ss_pred             cchhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-c
Q 044696            5 DGIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-P   83 (220)
Q Consensus         5 ~gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~   83 (220)
                      +++.+++++|++|+|+||++|..++++.+.+.++|++|+..+.+++|. ...+.+.++.+++++.+++++++|+.+|+ +
T Consensus       160 ~~I~~~l~~g~Iiid~STi~~~~~~~l~e~l~~kgi~vi~~hp~a~pe-~~g~~li~~~~aseE~iekv~elles~Gk~~  238 (242)
T d2b0ja2         160 KKFADAIPEGAIVTHACTIPTTKFAKIFKDLGREDLNITSYHPGCVPE-MKGQVYIAEGYASEEAVNKLYEIGKIARGKA  238 (242)
T ss_dssp             HHHGGGSCTTCEEEECSSSCHHHHHHHHHHTTCTTSEEEECBCSSCTT-TCCCEEEEESSSCHHHHHHHHHHHHHHHSCE
T ss_pred             HHHHhhCCCCcEEEecCCCcHHHHHHHHHhcccCCCEEECCCccCcCc-cccceEEecCCCCHHHHHHHHHHHHHHCCCe
Confidence            368889999999999999999999999999999999999777666654 45567788889999999999999999999 6


Q ss_pred             eec
Q 044696           84 TFM   86 (220)
Q Consensus        84 ~~~   86 (220)
                      |.+
T Consensus       239 ~vv  241 (242)
T d2b0ja2         239 FKM  241 (242)
T ss_dssp             EEE
T ss_pred             EeC
Confidence            653

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=98.54  E-value=6.4e-08  Score=72.19  Aligned_cols=77  Identities=16%  Similarity=0.197  Sum_probs=64.3

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhcCCcEE-EecCCCChHHhhccceeEEe-cCCHHhHHHHHHHHHHhcc-
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARERDCWAV-DAPVSGGDIGARDGKLAIFA-AGDSAVVQWLTPLFEVLGK-   82 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~l-dapV~g~~~~a~~g~l~i~~-gG~~~~~~~~~~~l~~~~~-   82 (220)
                      .+.+.+.++++|+|+||+.++..+++.+..   ..+|+ +.|+.|+......++..+++ |++.+.+++++|+|+.+|. 
T Consensus        72 ~~~~~~~~~~iiiD~~Svk~~~~~~~~~~~---~~~~v~~hP~~Gp~~~~~~g~~~v~~~g~~~~~~~~~~~ll~~~Ga~  148 (152)
T d2pv7a2          72 RLKPYLTENMLLADLTSVKREPLAKMLEVH---TGAVLGLHPMFGADIASMAKQVVVRCDGRFPERYEWLLEQIQIWGAK  148 (152)
T ss_dssp             HHGGGCCTTSEEEECCSCCHHHHHHHHHHC---SSEEEEEEECSCTTCSCCTTCEEEEEEEECGGGTHHHHHHHHHTTCE
T ss_pred             cccccccCCceEEEecccCHHHHHHHHHHc---cCCEEEecccCCCcccccCCcEEEEecCCCHHHHHHHHHHHHHhCCE
Confidence            466788999999999999999999887654   34565 67999998888888877766 7788999999999999998 


Q ss_pred             cee
Q 044696           83 PTF   85 (220)
Q Consensus        83 ~~~   85 (220)
                      +++
T Consensus       149 v~e  151 (152)
T d2pv7a2         149 IYQ  151 (152)
T ss_dssp             EEE
T ss_pred             EEe
Confidence            764

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=98.23  E-value=8.2e-08  Score=71.55  Aligned_cols=79  Identities=10%  Similarity=-0.035  Sum_probs=64.0

Q ss_pred             hhhcC-CCCCEEEecCCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecCCHHhHHHHHHHHHHhcc-ce
Q 044696            7 IVSAL-NPGAVYVDTTSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAGDSAVVQWLTPLFEVLGK-PT   84 (220)
Q Consensus         7 i~~~~-~~g~~ivd~ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG~~~~~~~~~~~l~~~~~-~~   84 (220)
                      +++.+ .+++++|++|+..|....+   .....+.+++++|+.+++..+..++++++++|++++++.++++|+.+|. ++
T Consensus        71 v~~~l~~~~~ivi~~s~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~~~~~~~l~~~lG~~~~  147 (153)
T d2i76a2          71 VANHLNLGDAVLVHCSGFLSSEIFK---KSGRASIHPNFSFSSLEKALEMKDQIVFGLEGDERGLPIVKKIAEEISGKYF  147 (153)
T ss_dssp             HHTTTCCSSCCEEECCSSSCGGGGC---SSSEEEEEECSCC--CTTGGGCGGGCCEEECCCTTTHHHHHHHHHHHCSCEE
T ss_pred             HHhhhcccceeeeecccchhhhhhh---hhccccceeeeecccccchhhhccCcEEEEeCCHHHHHHHHHHHHHHCCcEE
Confidence            44445 4799999999998865432   3345678899999999999998899999999999999999999999998 99


Q ss_pred             ecCC
Q 044696           85 FMGG   88 (220)
Q Consensus        85 ~~G~   88 (220)
                      ++++
T Consensus       148 ~i~~  151 (153)
T d2i76a2         148 VIPS  151 (153)
T ss_dssp             ECCG
T ss_pred             EeCC
Confidence            9874

>d1i36a1 a.100.1.8 (A:153-264) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Conserved hypothetical protein MTH1747
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=98.18  E-value=6.3e-06  Score=58.27  Aligned_cols=101  Identities=13%  Similarity=-0.018  Sum_probs=74.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCCh--HHHHhhhhhhccccCCCCchhhHHHHHHH
Q 044696           90 GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGS--MAMELYGERMIEKDFRPGGFAEYMVKDMG  167 (220)
Q Consensus        90 G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s--~~~~~~~~~~~~~~~~~~f~~~~~~KD~~  167 (220)
                      |.|+.+||+...++.+..+.+.|++..|+++|+.. .+++.+..+....  ....++.+++..+.+       -....|+
T Consensus         1 G~ASalKM~rS~~~KG~~AL~~e~~~aA~~~Gv~~-~l~~~l~~s~~~~~~~~~~~~v~~~~~ha~-------Rr~~EM~   72 (112)
T d1i36a1           1 GDASAIKMLRSSYTKGVSALLWETLTAAHRLGLEE-DVLEMLEYTEGNDFRESAISRLKSSCIHAR-------RRYEEMK   72 (112)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH-HHHHHHHTTSCSSTHHHHHHHHHHHHHTHH-------HHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHcCCccHHHHHHHHhcCCcchhh-------HHHHHHH
Confidence            78999999999999999999999999999999995 6778887665322  234445555443322       2457778


Q ss_pred             HHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCC
Q 044696          168 MGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDG  203 (220)
Q Consensus       168 ~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g  203 (220)
                      .+.++.++     ++++.+..++.+.|++..+.+.+
T Consensus        73 Eia~tl~~-----~l~P~m~~a~a~~~~~~~d~~~~  103 (112)
T d1i36a1          73 EVQDMLAE-----VIDPVMPTCIIRIFDKLKDVKVS  103 (112)
T ss_dssp             HHHHHHHT-----TSCCSHHHHHHHHHHHHCC----
T ss_pred             HHHHHHHH-----hCCchHHHHHHHHHHHHHhcCCC
Confidence            88888754     45668999999999988766544

>d1mv8a1 a.100.1.4 (A:203-300) GDP-mannose 6-dehydrogenase, middle domain {Pseudomonas aeruginosa [TaxId: 287]}

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: UDP-glucose/GDP-mannose dehydrogenase dimerisation domain
domain: GDP-mannose 6-dehydrogenase, middle domain
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.15  E-value=8.5e-06  Score=56.33  Aligned_cols=94  Identities=14%  Similarity=-0.059  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHHHHHHHHHH
Q 044696           91 CGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGV  170 (220)
Q Consensus        91 ~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~  170 (220)
                      .|..+|++.|.+....++.+.|...+|++.|+|...+.+.+....-...     .+....  ..++|.-.++.||.....
T Consensus         3 ~AEl~K~~~N~~~a~kIsf~Nel~~lc~~~g~d~~~v~~~~~~d~ri~~-----~~~~~~--pG~G~GG~ClpKD~~al~   75 (98)
T d1mv8a1           3 VAEMIKYTCNVWHAAKVTFANEIGNIAKAVGVDGREVMDVICQDHKLNL-----SRYYMR--PGFAFGGSCLPKDVRALT   75 (98)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHTTCTTTTT-----SSTTCS--CCSCCCSSSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCccccc-----cccccC--CcccCCccccchhHHHHH
Confidence            5789999999999999999999999999999999999999865321000     001110  013677889999999999


Q ss_pred             HHHhhcccCCCCCccHHHHHHHHHH
Q 044696          171 DVVEESEDERVVVLPGAALGKQLFS  195 (220)
Q Consensus       171 ~~a~~~~~~~g~~~p~~~~~~~~~~  195 (220)
                      ..+++.    +++.++.+.+.+.-+
T Consensus        76 ~~a~~~----~~~~~ll~~~~~~N~   96 (98)
T d1mv8a1          76 YRASQL----DVEHPMLGSLMRSNS   96 (98)
T ss_dssp             HHHHHT----TCCCTTGGGHHHHHH
T ss_pred             HHHHHc----CCChHHHHHHHHHHh
Confidence            999999    999999988877643

>d2pgda1 a.100.1.1 (A:177-473) 6-phosphogluconate dehydrogenase (6PGD) {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: 6-phosphogluconate dehydrogenase (6PGD)
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=98.06  E-value=1e-05  Score=66.65  Aligned_cols=97  Identities=13%  Similarity=0.070  Sum_probs=73.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHh---ccCCChHHHHhhhhhhccccCCCCchhhHH---
Q 044696           90 GCGQSCKIANQIVVGANLLGLSEGLVFADE-AGLDVRKWRDAVK---GGAAGSMAMELYGERMIEKDFRPGGFAEYM---  162 (220)
Q Consensus        90 G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~-~Gl~~~~~~~~l~---~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~---  162 (220)
                      |+|+.+||++|-+-++.|++++|++.+.++ .|++.+++.+++.   .+...|++++-....+..+|-+...-++..   
T Consensus         1 GsGH~vKMVHNgIEY~~mq~iaE~y~~l~~~~~~~~~~i~~vf~~w~~~~l~syLleit~~il~~kd~~~~~~ld~I~d~   80 (297)
T d2pgda1           1 GAGHFVKMVHNGIEYGDMQLICEAYHLMKDVLGLGHKEMAKAFEEWNKTELDSFLIEITASILKFQDADGKHLLPKIRDS   80 (297)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHTTTTTCBHHHHHHHHHHHCBCTTSSBSGGGSCCC
T ss_pred             CCchhhhhhccHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhCCCccHHHHHHHHHHHhccCCCcCcchhhhhcc
Confidence            799999999999999999999999999987 5999999888875   455678888876666654442221222221   


Q ss_pred             --HHH-HHHHHHHHhhcccCCCCCccHHHHH
Q 044696          163 --VKD-MGMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       163 --~KD-~~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                        .|. =+..++.|-++    |+|.|+...+
T Consensus        81 a~~kGTG~Wt~~~Al~l----gvp~p~I~~A  107 (297)
T d2pgda1          81 AGQKGTGKWTAISALEY----GVPVTLIGEA  107 (297)
T ss_dssp             CCCCSHHHHHHHHHHHH----TCCCHHHHHH
T ss_pred             ccCCCchHHHHHHHHHc----CCCchHHHHH
Confidence              111 36788999999    9999998877

>d1dlja1 a.100.1.4 (A:197-294) UDP-glucose dehydrogenase (UDPGDH), middle domain {Streptococcus pyogenes [TaxId: 1314]}

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: UDP-glucose/GDP-mannose dehydrogenase dimerisation domain
domain: UDP-glucose dehydrogenase (UDPGDH), middle domain
species: Streptococcus pyogenes [TaxId: 1314]

Probab=97.92  E-value=0.00017  Score=49.47  Aligned_cols=91  Identities=8%  Similarity=-0.110  Sum_probs=70.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhccCCChHHHHhhhhhhccccCCCCchhhHHHHHHHHHH
Q 044696           91 CGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGGAAGSMAMELYGERMIEKDFRPGGFAEYMVKDMGMGV  170 (220)
Q Consensus        91 ~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~~~~s~~~~~~~~~~~~~~~~~~f~~~~~~KD~~~~~  170 (220)
                      .|..+|++.|.+.+..++.+.|...+|++.|+|...+.+.+....-.+       +....  ...+|.-.++-||....+
T Consensus         3 eAE~~K~~~N~fla~kIsf~Ne~~~lc~~~g~d~~~v~~~~~~d~~~~-------~~~~~--pg~g~GG~ClpKD~~al~   73 (98)
T d1dlja1           3 EAEAVKLFANTYLALRVAYFNELDTYAESRKLNSHMIIQGISYDDRIG-------MHYNN--PSFGYGGYSLPKDTKQLL   73 (98)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSTTTC-------SSSCC--CCSSCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhccccC-------Ccccc--CCCCcccccCcccHHHHH
Confidence            478999999999999999999999999999999999998877543111       11111  123678889999998885


Q ss_pred             HHHhhcccCCCCCccHHHHHHHHHHH
Q 044696          171 DVVEESEDERVVVLPGAALGKQLFSA  196 (220)
Q Consensus       171 ~~a~~~~~~~g~~~p~~~~~~~~~~~  196 (220)
                        +.+.    |++.++++++.+.-+.
T Consensus        74 --~~~~----~~~~~ll~~~~~~N~~   93 (98)
T d1dlja1          74 --ANYN----NIPQTLIEAIVSSNNV   93 (98)
T ss_dssp             --HHHT----TSSCSHHHHHHHHHHH
T ss_pred             --HHhc----CCCcHHHHHHHHHHHh
Confidence              5666    8899999998876553

>d1pgja1 a.100.1.1 (A:179-478) 6-phosphogluconate dehydrogenase (6PGD) {Trypanosoma brucei [TaxId: 5691]}

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: 6-phosphogluconate dehydrogenase (6PGD)
species: Trypanosoma brucei [TaxId: 5691]

Probab=97.92  E-value=3.9e-05  Score=63.27  Aligned_cols=97  Identities=16%  Similarity=0.035  Sum_probs=72.0

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhcc----CCChHHHHhhhhhhccccCCCCchhhHH---
Q 044696           90 GCGQSCKIANQIVVGANLLGLSEGLVFADEAGLDVRKWRDAVKGG----AAGSMAMELYGERMIEKDFRPGGFAEYM---  162 (220)
Q Consensus        90 G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~~Gl~~~~~~~~l~~~----~~~s~~~~~~~~~~~~~~~~~~f~~~~~---  162 (220)
                      |+|+.+||++|-+.++.|+.++|++.+.+..|++.+++.+++...    ...|++++-....+...|-+..+-++..   
T Consensus         1 GsGH~vKmvHNgIEy~~mq~iaE~~~~l~~~~~~~~~i~~~f~~w~~~~~l~syL~eit~~il~~~d~~g~~l~d~I~d~   80 (300)
T d1pgja1           1 GAGSCVKMYHNSGEYAILQIWGEVFDILRAMGLNNDEVAAVLEDWKSKNFLKSYMLDISIAAARAKDKDGSYLTEHVMDR   80 (300)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTSTTCBHHHHHHHHHHHCBCTTSSBGGGGBCCC
T ss_pred             CCccchhhhcchHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCeehHHHHHHHHHHHhhcCCCCchhHHHhccc
Confidence            799999999999999999999999999999999999888887642    2467777665554444432212212221   


Q ss_pred             --HH-HHHHHHHHHhhcccCCCCCccHHHHH
Q 044696          163 --VK-DMGMGVDVVEESEDERVVVLPGAALG  190 (220)
Q Consensus       163 --~K-D~~~~~~~a~~~~~~~g~~~p~~~~~  190 (220)
                        .| .=+..++.+-+.    |+|+|+...+
T Consensus        81 a~~kGTG~Wt~~~al~~----gvp~p~i~~A  107 (300)
T d1pgja1          81 IGSKGTGLWSAQEALEI----GVPAPSLNMA  107 (300)
T ss_dssp             CCCCSHHHHHHHHHHHH----TCCCHHHHHH
T ss_pred             ccCCchHHHHHHHHHHc----CCCccHHHHH
Confidence              12 236678888899    9999988776

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=97.69  E-value=4.2e-05  Score=57.01  Aligned_cols=81  Identities=19%  Similarity=0.231  Sum_probs=62.9

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHh-cCCcEEEecCCCChHHhhc----cceeEEe---cCCHHhHHHHHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARE-RDCWAVDAPVSGGDIGARD----GKLAIFA---AGDSAVVQWLTPLF   77 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~-~G~~~ldapV~g~~~~a~~----g~l~i~~---gG~~~~~~~~~~~l   77 (220)
                      .+.+.+.++.+|+|++|+.+...+.+.+.... .+.+.+.+|...|+..+..    +...+++   +++++.+++++++|
T Consensus        76 ~l~~~l~~~~iv~~~~s~~~~~~~~~~~~~~~~~~~h~~~~~~~~g~~~a~~~l~~~~~~il~~~~~~~~~~~~~v~~l~  155 (165)
T d2f1ka2          76 KLIPHLSPTAIVTDVASVKTAIAEPASQLWSGFIGGHPMAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLACLRSVL  155 (165)
T ss_dssp             HHGGGSCTTCEEEECCSCCHHHHHHHHHHSTTCEEEEECCCCSCSSGGGCCTTTTTTCEEEEEECTTCCHHHHHHHHHHH
T ss_pred             hhhhhcccccceeeccccchHHHHHHHHhhcccccceeeecccccchhhhcccccCCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            45677899999999999999888877665432 2567788888877776643    4444554   88999999999999


Q ss_pred             HHhcc-ceec
Q 044696           78 EVLGK-PTFM   86 (220)
Q Consensus        78 ~~~~~-~~~~   86 (220)
                      +.+|. +++|
T Consensus       156 ~~lG~~v~~c  165 (165)
T d2f1ka2         156 EPLGVKIYLC  165 (165)
T ss_dssp             GGGTCEEEEC
T ss_pred             HHhCCEEEeC
Confidence            99998 8876

>d2pgda1 a.100.1.1 (A:177-473) 6-phosphogluconate dehydrogenase (6PGD) {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: 6-phosphogluconate dehydrogenase (6PGD)
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=97.03  E-value=0.0059  Score=49.65  Aligned_cols=122  Identities=7%  Similarity=0.024  Sum_probs=91.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhccC-CChHHHHhhhhhhccccCC------CC
Q 044696           90 GCGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKGGA-AGSMAMELYGERMIEKDFR------PG  156 (220)
Q Consensus        90 G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~------~~  156 (220)
                      .....+|.+.|.+.++.+.+++|++.+.++      .++|..++.++.+.+. -.|++++...+.+.+..-.      +.
T Consensus       138 ~~~~~i~~l~~al~~~~i~syaQGf~ll~~as~~~~w~ldl~~ia~iW~~GcIIrS~LL~~i~~a~~~~~~l~nl~~~~~  217 (297)
T d2pgda1         138 DKKSFLEDIRKALYASKIISYAQGFMLLRQAATEFGWTLNYGGIALMWRGGCIIRSVFLGKIKDAFDRNPGLQNLLLDDF  217 (297)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHTTSSSTTCBTHHHHHHHHHHHCTTCSCGGGSHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCcCccHHHHHHHHcCCCeeeHHHHHHHHHHHHhCCCccchhhcHH
Confidence            457778999999999999999999999976      5899999999999877 5788887665554432211      11


Q ss_pred             c--hhhHHHHHHHHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHhcC
Q 044696          157 G--FAEYMVKDMGMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQGLVSVIERING  219 (220)
Q Consensus       157 f--~~~~~~KD~~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~av~~~~~~~~~  219 (220)
                      |  .+....++.+.++..+-+.    |+|+|.+..+...|..-...    .-...++...|+..|
T Consensus       218 ~~~~l~~~~~~~r~~v~~ai~~----gip~P~lssaL~y~~~~~~~----~lp~~lIQAqRD~FG  274 (297)
T d2pgda1         218 FKSAVENCQDSWRRAISTGVQA----GIPMPCFTTALSFYDGYRHA----MLPANLIQAQRDYFG  274 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHH----TCCCHHHHHHHHHHHHHHCS----SCTHHHHHHHHHHHH
T ss_pred             HHHHHhhccHHHHHHHHHHHHc----CCChHHHHHHHHHHHHhccC----CchhHHHHHHHHHhc
Confidence            2  3445556678899999999    99999999999988754432    234567777766544

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.80  E-value=0.0027  Score=46.79  Aligned_cols=81  Identities=17%  Similarity=0.235  Sum_probs=58.8

Q ss_pred             chhhcCCCCCEEEecCCCCHHHHHHHHHHHHhc--CCcEEEecCCCChHHhh----ccceeEEe---cCCHHhHHHHHHH
Q 044696            6 GIVSALNPGAVYVDTTSSHPALAREIFKVARER--DCWAVDAPVSGGDIGAR----DGKLAIFA---AGDSAVVQWLTPL   76 (220)
Q Consensus         6 gi~~~~~~g~~ivd~ST~~p~~~~~la~~~~~~--G~~~ldapV~g~~~~a~----~g~l~i~~---gG~~~~~~~~~~~   76 (220)
                      .+.+.+.++.+++|.+++.....+++.+.+.++  +.|-+..+-..|+..+.    .|...+++   +.+++.+++++.+
T Consensus        81 ~l~~~~~~~~ii~d~~s~k~~~~~~~~~~~~~~~i~~hPm~G~e~sG~~~a~~~Lf~g~~~il~p~~~~~~~~~~~v~~~  160 (171)
T d2g5ca2          81 KLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGGHPIAGTEKSGVEYSLDNLYEGKKVILTPTKKTDKKRLKLVKRV  160 (171)
T ss_dssp             HHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECEEEECCCSCCSGGGCCSSTTTTCEEEECCCSSSCHHHHHHHHHH
T ss_pred             hhhccccccccccccccccHHHHHHHHHhhcccccccccccccccccHHHHHHHhhCCCeEEEecCCCCCHHHHHHHHHH
Confidence            355678899999999999999998888777653  33334443334555554    35556666   5578899999999


Q ss_pred             HHHhcc-ceec
Q 044696           77 FEVLGK-PTFM   86 (220)
Q Consensus        77 l~~~~~-~~~~   86 (220)
                      ++.+|. +.++
T Consensus       161 ~~~lG~~v~~M  171 (171)
T d2g5ca2         161 WEDVGGVVEYM  171 (171)
T ss_dssp             HHHTTCEEEEC
T ss_pred             HHHcCCEEEeC
Confidence            999998 7654

>d1pgja1 a.100.1.1 (A:179-478) 6-phosphogluconate dehydrogenase (6PGD) {Trypanosoma brucei [TaxId: 5691]}

class: All alpha proteins
fold: 6-phosphogluconate dehydrogenase C-terminal domain-like
superfamily: 6-phosphogluconate dehydrogenase C-terminal domain-like
family: Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain
domain: 6-phosphogluconate dehydrogenase (6PGD)
species: Trypanosoma brucei [TaxId: 5691]

Probab=96.55  E-value=0.025  Score=45.91  Aligned_cols=125  Identities=14%  Similarity=0.066  Sum_probs=86.8

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cCCCHHHHHHHHhccC-CChHHHHhhhhhhccccCCC----
Q 044696           87 GGAGCGQSCKIANQIVVGANLLGLSEGLVFADE------AGLDVRKWRDAVKGGA-AGSMAMELYGERMIEKDFRP----  155 (220)
Q Consensus        87 G~~G~a~~~Kl~~n~~~~~~~~~~aEa~~la~~------~Gl~~~~~~~~l~~~~-~~s~~~~~~~~~~~~~~~~~----  155 (220)
                      .....+.-+|.+.|.+.++.+.+++|++.+.++      .++|..++.++.+.+. -.|.+++...+...+....+    
T Consensus       140 ~~~~~~~~i~~l~~Al~~~~i~syaQGf~LL~~as~~~~w~ldl~~Ia~iWr~GCIIRS~LL~~i~~a~~~~~~l~~l~~  219 (300)
T d1pgja1         140 NKSPSGPEIKQLYDSVCIAIISCYAQMFQCLREMDKVHNFGLNLPATIATFRAGCILQGYLLKPMTEAFEKNPNISNLMC  219 (300)
T ss_dssp             CCSTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHTTSSSSTTCBTTHHHHHHHHHHCTTCSCTTG
T ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCccchHHHHHhcCCceeeHHHHHHHHHHhhcCCccchhhH
Confidence            446788999999999999999999999999976      5799999999999877 56777776554443221111    


Q ss_pred             Cch--hhHHHHHH-HHHHHHHhhcccCCCCCccHHHHHHHHHHHHHHCCCCCCChH-HHHHHHHHhcC
Q 044696          156 GGF--AEYMVKDM-GMGVDVVEESEDERVVVLPGAALGKQLFSAMVANGDGKFGTQ-GLVSVIERING  219 (220)
Q Consensus       156 ~f~--~~~~~KD~-~~~~~~a~~~~~~~g~~~p~~~~~~~~~~~a~~~G~g~~d~~-av~~~~~~~~~  219 (220)
                      .|.  +....++. +.+...+.+.    |+|+|.+..+...|.....    +...+ .++...|+..|
T Consensus       220 ~f~~~~~~~~~~~~r~v~~~~~~~----gip~P~lssaL~y~~~~~~----~~l~~anLIQAqRD~FG  279 (300)
T d1pgja1         220 AFQTEIRAGLQNYRDMVALITSKL----EVSIPVLSASLNYVTAMFT----PTLKYGQLVSLQRDVFG  279 (300)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTC----SCCTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHhc----CCCHHHHHHHHHHHHHhhc----cCCchhHHHHHHHhhcC
Confidence            121  11112222 4455567788    9999999999998876533    33343 57777776544

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.69  E-value=0.13  Score=38.58  Aligned_cols=77  Identities=10%  Similarity=-0.017  Sum_probs=52.1

Q ss_pred             hcCCCCCEEEecCCCCHHHHHHHHHHHHh--------cCCcEEEecC--CCChHHhhcccee-EEecC-CHHhHHHHHHH
Q 044696            9 SALNPGAVYVDTTSSHPALAREIFKVARE--------RDCWAVDAPV--SGGDIGARDGKLA-IFAAG-DSAVVQWLTPL   76 (220)
Q Consensus         9 ~~~~~g~~ivd~ST~~p~~~~~la~~~~~--------~G~~~ldapV--~g~~~~a~~g~l~-i~~gG-~~~~~~~~~~~   76 (220)
                      ....++.++|-.||+.|.+++++...+.+        ....++-+|-  .-|..--+-.... +++|| +++..+.++.+
T Consensus       111 ~~~~~~~liii~STv~pGtt~~~~~~~l~~~~~~~~~~~~~~~~~PE~~~~G~a~~d~~~~~~iViG~~~~~~~~~~~~l  190 (202)
T d1mv8a2         111 REKSERHTVVVRSTVLPGTVNNVVIPLIEDCSGKKAGVDFGVGTNPEFLRESTAIKDYDFPPMTVIGELDKQTGDLLEEI  190 (202)
T ss_dssp             TTCCSCCEEEECSCCCTTHHHHTHHHHHHHHHSCCBTTTBEEEECCCCCCTTSHHHHHHSCSCEEEEESSHHHHHHHHHH
T ss_pred             ecccCCcceeeccccCCcchhhhhhhhhhccccccccccccchhhhhhhcccchhhhhcCCCeEEEEeCCHHHHHHHHHH
Confidence            34568899999999999999988765432        2356788884  3333222222222 56677 56788899999


Q ss_pred             HHHhcc-cee
Q 044696           77 FEVLGK-PTF   85 (220)
Q Consensus        77 l~~~~~-~~~   85 (220)
                      ++.+.. ++.
T Consensus       191 y~~i~~~ii~  200 (202)
T d1mv8a2         191 YRELDAPIIR  200 (202)
T ss_dssp             HTTSSSCEEE
T ss_pred             HHhcCCCeEe
Confidence            998876 543

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=89.09  E-value=0.76  Score=32.47  Aligned_cols=77  Identities=6%  Similarity=0.015  Sum_probs=47.2

Q ss_pred             chhhcCCCCCEEEec-CCCCHHHHHHHHHHHHhcCCcEEEecCCCChHHhhccceeEEecC--CHHhHHHHHHHHHHhcc
Q 044696            6 GIVSALNPGAVYVDT-TSSHPALAREIFKVARERDCWAVDAPVSGGDIGARDGKLAIFAAG--DSAVVQWLTPLFEVLGK   82 (220)
Q Consensus         6 gi~~~~~~g~~ivd~-ST~~p~~~~~la~~~~~~G~~~ldapV~g~~~~a~~g~l~i~~gG--~~~~~~~~~~~l~~~~~   82 (220)
                      .+++.+.+++++|++ +++++++   +.+.+. .+.+++.+- ...|.....|...+..+.  +++.++.++++|+.+|.
T Consensus        72 ~vl~~l~~~~~iis~~agi~~~~---l~~~l~-~~~~ivr~m-PN~~~~v~~g~~~~~~~~~~~~~~~~~v~~l~~~~G~  146 (152)
T d2ahra2          72 TVLKPLHFKQPIISMAAGISLQR---LATFVG-QDLPLLRIM-PNMNAQILQSSTALTGNALVSQELQARVRDLTDSFGS  146 (152)
T ss_dssp             HHHTTSCCCSCEEECCTTCCHHH---HHHHHC-TTSCEEEEE-CCGGGGGTCEEEEEEECTTCCHHHHHHHHHHHHTTEE
T ss_pred             HHhhhcccceeEecccccccHHH---HHhhhc-ccccchhhc-cchhhhcCccceEEEeCCCCCHHHHHHHHHHHHhCCC
Confidence            467778899999977 4445554   334443 345565541 122333444443444333  57889999999999998


Q ss_pred             ceecC
Q 044696           83 PTFMG   87 (220)
Q Consensus        83 ~~~~G   87 (220)
                      ++++.
T Consensus       147 ~~~v~  151 (152)
T d2ahra2         147 TFDIS  151 (152)
T ss_dssp             EEECC
T ss_pred             EEEec
Confidence            55553