Citrus Sinensis ID: 044780

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220
Protein Sequence
MAQQPSFGGAAANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEINRAGSGSSSSGGVAGGGGG
Secondary Structure (PSIPRED)
cccccccccccccccEEEcccccEEEEEEEEEEEEEcccEEEEcccccEEEEEEccccccccEEEEEccccccEEEEEccccccccEEEEEEcccccccccEEEEEEccccccccccEEEEEccccccccccEEEEEcccccccccEEEEEEcccccEEEEEEEEEEEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccEEEEccccEEEEEEEEEEEEccccEEEEEccccEEEEEcccccccccEEEEEcccccEEEEEEEccccccccEEEEEcccccccccEEEEEEcccEEccccEEEEEEccccccccccEEEEcccccccccccEEEEEccccEEEEEEEEcccccEEEEcccEEEEEEcccccHHHHHHHHHHHHHHccccccccccccccccccc
Coil and Loop (DISEMBL)
maqqpsfggaaanpvavisshhpidLAIVRKVMIfssgnfdvkdtngniLFKVKNVFAFMRRRRVLldgagnpiATIREKAMSRHRRwqvfrgessdprdLIFSAKISSLWSFKTTKLNVFLanntredvcdfrvvegsswlfepssctiyagKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEinragsgssssggvaggggg
Flexible Loop (DISEMBL)
MAQQPSFGGAAANPVAVISSHHPIDLAIVRKVMIFSSGnfdvkdtngnilFKVKNVFAFMRRRrvlldgagnpiatirekamsrhrrwqvfrgessdprdLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEINragsgssssggvaggggg
Low Complexity Region (SEG)
MAQQPSFGGAAANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEINRagsgssssggvaggggg
Disordered region (IsUnstruct)
*************PVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRG****PRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEI*******************
Disordered Region (DISOPRED)
****************VISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVF*****DPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILD*********************
Disordered Region (DISEMBL)
**********AANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEINRAG***************
Disordered Region (DISPRO)
*********AAANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEINRA****************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAQQPSFGGAAANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEINRAGSGSSSSGGVAGGGGG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	220	2.2.26 [Sep-21-2011]
Q9LZX1	217	Protein LURP-one-related	yes	no	0.886	0.898	0.554	2e-57
Q9SF24	194	Protein LURP-one-related	no	no	0.822	0.932	0.535	9e-51
Q9LQ36	224	Protein LURP-one-related	no	no	0.813	0.799	0.505	2e-46
Q9ZQR8	207	Protein LURP1 OS=Arabidop	no	no	0.854	0.908	0.467	8e-44
Q9LSQ1	185	Protein LURP-one-related	no	no	0.727	0.864	0.422	7e-28
Q9LYM3	204	Protein LURP-one-related	no	no	0.804	0.867	0.347	2e-22
B3H5L1	197	Protein LURP-one-related	no	no	0.777	0.868	0.319	3e-17
Q9LVZ8	220	Protein LURP-one-related	no	no	0.763	0.763	0.279	3e-15
Q9SSC7	210	Protein LURP-one-related	no	no	0.75	0.785	0.308	6e-11
Q9ZVI6	196	Protein LURP-one-related	no	no	0.859	0.964	0.266	1e-09

>sp|Q9LZX1|LOR15_ARATH Protein LURP-one-related 15 OS=Arabidopsis thaliana GN=At5g01750 PE=1 SV=1

 Score =  222 bits (565), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 112/202 (55%), Positives = 143/202 (70%), Gaps = 7/202 (3%)

Query: 2   AQQPSFGGAAANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMR 61
           A  P  GG   +P     + +PID+AIVRK+M  + GNF + D NGN+LFKVK     + 
Sbjct: 18  APTPQAGGVVVDPK--YCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLH 75

Query: 62  RRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVF 121
            +RVLLDG+G P+ T+REK +S H RWQVFRG S+D RDL+++ K SS+   K TKL+VF
Sbjct: 76  DKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLK-TKLDVF 134

Query: 122 LANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVT 181
           L +N  E  CDFRV    SWL    SC +YAG+S AIVAQM  K TV+S+FLGK+NF VT
Sbjct: 135 LGHNKDEKRCDFRV--KGSWL--ERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVT 190

Query: 182 VHPNVDYAFIVALIVILDEINR 203
           V+PNVDYAFI +L+VILD++NR
Sbjct: 191 VYPNVDYAFIASLVVILDDVNR 212

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SF24|LOR10_ARATH Protein LURP-one-related 10 OS=Arabidopsis thaliana GN=At3g11740 PE=2 SV=2

 Score =  199 bits (507), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 99/185 (53%), Positives = 129/185 (69%), Gaps = 4/185 (2%)

Query: 22  HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKA 81
           +PI+L IVRKVM  + GNF V D NGN+LFKVK     +  +R+LLD    PI T+RE  
Sbjct: 12  YPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAYDTPILTLRENK 71

Query: 82  MSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSW 141
           +S H RW V+RG+S+D  DL+++ K SS+      KL++FLA+N    +CDF V    SW
Sbjct: 72  VSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHV--KGSW 129

Query: 142 LFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEI 201
           +    SC +YAGKS AIVAQM +K T +SI +GK+NF VTV+PNVD+AFIV+LIVILD+I
Sbjct: 130 I--DRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDI 187

Query: 202 NRAGS 206
           NR  S
Sbjct: 188 NREDS 192

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQ36|LOR1_ARATH Protein LURP-one-related 1 OS=Arabidopsis thaliana GN=At1g33840 PE=2 SV=2

 Score =  185 bits (470), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 93/184 (50%), Positives = 131/184 (71%), Gaps = 5/184 (2%)

Query: 19  SSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIR 78
            S HP+DLAIVRKV+  + GNF + +  GN+LFKVK+ F  +  +R+L+DG G  + T++
Sbjct: 33  CSLHPVDLAIVRKVLKITDGNFVITNAEGNLLFKVKDPFFSLHEKRILMDGFGTKVLTLK 92

Query: 79  EKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEG 138
            K M+ H RW VFRG S++  DL+++ K S++    TTKL+VFLA+N  +  CD+R +EG
Sbjct: 93  GKIMTMHDRWLVFRGGSTEEVDLLYTVKRSNMVQI-TTKLDVFLADNIEQKKCDYR-LEG 150

Query: 139 SSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVIL 198
             WL   +SC +YAG S  I+AQM EK+T++S+  GK+NF +TV+PNVDYAFI +LIVIL
Sbjct: 151 -VWL--ETSCFVYAGDSDIILAQMREKKTMQSVLFGKDNFCLTVNPNVDYAFIASLIVIL 207

Query: 199 DEIN 202
            EI 
Sbjct: 208 VEIQ 211

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZQR8|LURP1_ARATH Protein LURP1 OS=Arabidopsis thaliana GN=LURP1 PE=2 SV=1

 Score =  176 bits (447), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 92/197 (46%), Positives = 125/197 (63%), Gaps = 9/197 (4%)

Query: 13  NPVAVISSHH----PIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLD 68
            P  ++ S +    P+ LAIVRKVM  + GNF +   +G +LFKVK+    +  +R+LLD
Sbjct: 3   QPCVIVGSKYCSPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSLHGKRILLD 62

Query: 69  GAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTRE 128
            +G  + T+R K M+ H RWQVFRG S++   L+++ K SS+      KL VFLANN  E
Sbjct: 63  CSGAKVLTLRGKMMTMHDRWQVFRGGSTEEGALLYTVKRSSMIQL-APKLEVFLANNVEE 121

Query: 129 DVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDY 188
            +CDF+V    +WL    SC +YAG S  I+A M  KQT++  F GK++F VTV  NVDY
Sbjct: 122 KICDFKV--KGAWL--DDSCVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDY 177

Query: 189 AFIVALIVILDEINRAG 205
           AFI +LIVIL EI +AG
Sbjct: 178 AFIASLIVILVEIEKAG 194

Involved in basal defense against virulent oomycetes. Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSQ1|LOR13_ARATH Protein LURP-one-related 13 OS=Arabidopsis thaliana GN=At3g16900 PE=3 SV=1

 Score =  124 bits (310), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/187 (42%), Positives = 106/187 (56%), Gaps = 27/187 (14%)

Query: 22  HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKA 81
            P+DL I        +G+  VKD  GN +FKVK     +  +R+L+D   +PI T++ K 
Sbjct: 24  QPLDLTI--------TGD-TVKDATGNKVFKVKTPLFGLHNKRILVDPNDSPIVTMKMKV 74

Query: 82  MSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANN-TREDVCDFRVVEGSS 140
            S+H RWQV+RG  SD  D IF+ K SS    K T++ VFL +N TRE  CDF  ++G  
Sbjct: 75  TSKHDRWQVYRG--SDLDDKIFTVKRSSTVQLK-TRVEVFLKHNQTRESSCDF-TIKGR- 129

Query: 141 WLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDE 200
             F   +CTIY   S+ I+AQ+ E         G    + T++PNVDYAFIV LI I D 
Sbjct: 130 --FMKRACTIYVADSTKIIAQVYE---------GHERLVATIYPNVDYAFIVTLIFIFDL 178

Query: 201 INRAGSG 207
           IN  G+G
Sbjct: 179 IN-MGTG 184

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LYM3|LOR14_ARATH Protein LURP-one-related 14 OS=Arabidopsis thaliana GN=At3g56180 PE=2 SV=2

 Score =  105 bits (262), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 16/193 (8%)

Query: 15  VAVISSH----HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGA 70
           ++V+S      +P+DL + RKV  FS   ++V D +GN+L ++        R+RV+ D A
Sbjct: 16  ISVVSDQFCNPYPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGFNRKRVMRDPA 75

Query: 71  GNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNT---R 127
           G  I ++R+K ++   +W+V  GES +  DL+F+ + S   S KT+ ++VFL  N    +
Sbjct: 76  GFTILSMRQKGLALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTS-VDVFLPENNNVKK 134

Query: 128 EDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVD 187
            + CDF    G       S+ +    K+ A++A +    T  S   GK NF V V+P VD
Sbjct: 135 TNTCDFHASGGY------SNISFKVFKADALIAGV--GFTWGSFCKGKYNFKVRVNPEVD 186

Query: 188 YAFIVALIVILDE 200
           YAFI+AL+V++D+
Sbjct: 187 YAFIIALLVMVDD 199

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|B3H5L1|LOR9_ARATH Protein LURP-one-related 9 OS=Arabidopsis thaliana GN=At3g10986 PE=3 SV=1

 Score = 89.0 bits (219), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 101/188 (53%), Gaps = 17/188 (9%)

Query: 22  HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKA 81
           +  +L + R+        +DV D + N++F V      +RR+RVL D AG P+ ++R K 
Sbjct: 13  YTTELVVRRRRESLKRERYDVFDLSNNLIFTVDGGIWNIRRKRVLRDAAGIPLLSMRTKG 72

Query: 82  MSRHR-RWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVC----DF--- 133
           +   R  W+V++G+S++  +L+FSA+  +L SFKT+       + +  D+     DF   
Sbjct: 73  LVPMRYNWEVYKGDSTESDNLLFSAREPNLLSFKTSLDVTLPPDQSSTDISSVEPDFQTF 132

Query: 134 -RVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIV 192
            R +  S  LFEP   T+        +A+++   T   +  G  +F V V+P VD+AF+V
Sbjct: 133 GRYIGSSFKLFEPIHNTL--------LAEVVHDFTWGGLIKGSYSFKVRVNPYVDFAFVV 184

Query: 193 ALIVILDE 200
           AL+VI D+
Sbjct: 185 ALLVITDD 192

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LVZ8|LOR12_ARATH Protein LURP-one-related 12 OS=Arabidopsis thaliana GN=At3g15810 PE=2 SV=1

 Score = 82.0 bits (201), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 90/179 (50%), Gaps = 11/179 (6%)

Query: 26  LAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRR--VLLDGAGNPIATIREKAMS 83
           L + +  + ++   F   D  G+I+F+V +     R     VL+D  G  + T++ K  +
Sbjct: 33  LTVCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRKRPT 92

Query: 84  RHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLF 143
            H+RW+ F GE S+ +  IFS + SS+    T ++ V+  + T E+     +++G    F
Sbjct: 93  LHQRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVY--DGTGEEY----IIDGD---F 143

Query: 144 EPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEIN 202
              SC IY  K   +     +     ++ LG++ F + + P  D AF + L+V+LD+IN
Sbjct: 144 SQRSCLIYDTKKCTVAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQIN 202

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSC7|LOR5_ARATH Protein LURP-one-related 5 OS=Arabidopsis thaliana GN=At1g80120 PE=1 SV=1

 Score = 67.8 bits (164), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 13/178 (7%)

Query: 29  VRKVMIFSSGN-FDVKDTNGNILFKVKNVFAFMRRRR---VLLDGAGNPIATIREKAMSR 84
           VRK  +F +G+ F V D  G+++F+V +      R     VL+D  G  + T+R K  S 
Sbjct: 21  VRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPSL 80

Query: 85  HRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFE 144
            RRW+ + GE SD +  IF  + SS+    +  + V+         C   ++EGS   F 
Sbjct: 81  RRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVYGDYQ-----CSEYLIEGS---FG 132

Query: 145 PSSCTIYAGKSSAIVAQMLEK-QTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEI 201
             +CT+   ++   VA++  K     ++ LGK+ F + V P  D AF + L+++LD+I
Sbjct: 133 ARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQI 190

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZVI6|LOR8_ARATH Protein LURP-one-related 8 OS=Arabidopsis thaliana GN=At2g38640 PE=2 SV=1

 Score = 63.5 bits (153), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 94/203 (46%), Gaps = 14/203 (6%)

Query: 4   QPSFGGAAANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRR 63
            P F        ++  S   + L + +K ++F+   F V + NG ++F+V N     R  
Sbjct: 5   HPKFPSTCEE--SLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDN 62

Query: 64  RVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLA 123
            VL+D +G P+ +IR K +S    W V+ GE+   RD IF+A+ +         L    A
Sbjct: 63  IVLMDASGFPLLSIRRKKLSLGDCWMVYDGETE--RDPIFTARKNVSIISNRKSLAWVSA 120

Query: 124 NNTREDVCDFRVVEGSSWLFEPSSCTIY-AGKSSAIVAQMLEKQTV-KSIFLGKNNFMVT 181
             T         +EGS   +   SC I    ++    A++  K+TV   +  GK+ + + 
Sbjct: 121 KKTV-----LYEIEGS---YGQRSCKILDERRNKKKTAEIKRKETVIGGVAFGKDVYKLI 172

Query: 182 VHPNVDYAFIVALIVILDEINRA 204
           V   ++    +AL +ILD++ R+
Sbjct: 173 VESEMEPRVAMALTIILDQMFRS 195

Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
255637572	216	unknown [Glycine max]	0.85	0.865	0.602	4e-60
388504720	214	unknown [Lotus japonicus]	0.818	0.841	0.643	6e-60
388516681	216	unknown [Lotus japonicus]	0.804	0.819	0.648	6e-60
356568182	216	PREDICTED: protein LURP-one-related 15-l	0.85	0.865	0.602	6e-60
255586349	215	conserved hypothetical protein [Ricinus	0.931	0.953	0.572	1e-59
356532197	215	PREDICTED: protein LURP-one-related 15-l	0.877	0.897	0.611	1e-59
357506497	215	hypothetical protein MTR_7g072140 [Medic	0.890	0.911	0.585	6e-59
225439608	216	PREDICTED: protein LURP-one-related 15 [	0.895	0.912	0.541	3e-57
357506501	226	hypothetical protein MTR_7g072170 [Medic	0.904	0.880	0.560	5e-57
297735581	192	unnamed protein product [Vitis vinifera]	0.809	0.927	0.584	4e-56

>gi|255637572|gb|ACU19112.1| unknown [Glycine max]

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 118/196 (60%), Positives = 148/196 (75%), Gaps = 9/196 (4%)

Query: 12  ANPVAVI----SSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLL 67
           A P AVI     + +P+DLA+V+KVM  S GNF V D NGN++FKVK     +R RR+L+
Sbjct: 21  AVPTAVIGPQFCASYPLDLAVVKKVMTLSDGNFVVTDVNGNVVFKVKGSLMTLRDRRILV 80

Query: 68  DGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTR 127
           D AGNP+ T+R K M+ H RWQ FRGES++ +DLIF+ K SSL  FK TKL+VFLANNT+
Sbjct: 81  DAAGNPLVTLRRKIMTTHDRWQAFRGESTEAKDLIFTLKRSSLIQFK-TKLDVFLANNTK 139

Query: 128 EDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVD 187
           EDVCDF+V    SWL    SC +YAG+S+ IVAQM +K TV+SI +GK+ FMVTV+PN+D
Sbjct: 140 EDVCDFKV--KGSWL--ERSCVVYAGESNNIVAQMHKKHTVQSILIGKDQFMVTVYPNID 195

Query: 188 YAFIVALIVILDEINR 203
           YAF+VALIVILDEIN 
Sbjct: 196 YAFVVALIVILDEINE 211

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388504720|gb|AFK40426.1| unknown [Lotus japonicus]

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 119/185 (64%), Positives = 144/185 (77%), Gaps = 5/185 (2%)

Query: 22  HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKA 81
           +P+DLAIV+KVM  S GNF V D NGNI+FKVK     +R RRVL+D AGNPIAT+R K 
Sbjct: 35  YPVDLAIVKKVMTISDGNFVVTDINGNIVFKVKGSLLTLRDRRVLIDAAGNPIATLRRKI 94

Query: 82  MSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSW 141
           M+ H RWQ +RGES++ +DLIF+ K SSL  FK TKL+VFLA NT+EDVCDF+V    SW
Sbjct: 95  MTAHDRWQAYRGESTEAKDLIFTLKRSSLIQFK-TKLDVFLATNTKEDVCDFKV--KGSW 151

Query: 142 LFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEI 201
            FE  SC +YAG+S+ IVAQM +K TV+SI +GK+NF VTV+PN+DYAFIVALIVILDEI
Sbjct: 152 -FE-RSCVVYAGESNTIVAQMHKKHTVQSILIGKDNFTVTVYPNIDYAFIVALIVILDEI 209

Query: 202 NRAGS 206
           N   S
Sbjct: 210 NEDES 214

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388516681|gb|AFK46402.1| unknown [Lotus japonicus]

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 118/182 (64%), Positives = 143/182 (78%), Gaps = 5/182 (2%)

Query: 22  HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKA 81
           +P+DLAIV+KVM  S GNF V D NGNI+FKVK     +R RRVL+D AGNPIAT+R K 
Sbjct: 35  YPVDLAIVKKVMTISDGNFVVTDINGNIVFKVKGSLLTLRDRRVLIDAAGNPIATLRRKI 94

Query: 82  MSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSW 141
           M+ H RWQ +RGES++ +DLIF+ K SSL  FK TKL+VFLA NT+EDVCDF+V    SW
Sbjct: 95  MTAHDRWQAYRGESTEAKDLIFTLKRSSLIQFK-TKLDVFLATNTKEDVCDFKV--KGSW 151

Query: 142 LFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEI 201
            FE  SC +YAG+S+ IVAQM +K TV+SI +GK+NF VTV+PN+DYAFIVALIVILDEI
Sbjct: 152 -FE-RSCVVYAGESNTIVAQMHKKHTVQSILIGKDNFTVTVYPNIDYAFIVALIVILDEI 209

Query: 202 NR 203
           N 
Sbjct: 210 NE 211

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356568182|ref|XP_003552292.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 118/196 (60%), Positives = 147/196 (75%), Gaps = 9/196 (4%)

Query: 12  ANPVAVISSH----HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLL 67
           A P AVI       +P+DLA+V+KVM  S GNF V D NGN++FKVK     +R RR+L+
Sbjct: 21  AVPTAVIGPQFCAPYPLDLAVVKKVMTLSDGNFVVTDVNGNVVFKVKGSLMTLRDRRILV 80

Query: 68  DGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTR 127
           D AGNP+ T+R K M+ H RWQ FRGES++ +DLIF+ K SSL  FK TKL+VFLANNT+
Sbjct: 81  DAAGNPLVTLRRKIMTAHDRWQAFRGESTEAKDLIFTLKRSSLIQFK-TKLDVFLANNTK 139

Query: 128 EDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVD 187
           EDVCDF+V    SWL    SC +YAG+S+ IVAQM +K TV+SI +GK+ FMVTV+PN+D
Sbjct: 140 EDVCDFKV--KGSWL--ERSCVVYAGESNNIVAQMHKKHTVQSILIGKDQFMVTVYPNID 195

Query: 188 YAFIVALIVILDEINR 203
           YAF+VALIVILDEIN 
Sbjct: 196 YAFVVALIVILDEINE 211

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255586349|ref|XP_002533824.1| conserved hypothetical protein [Ricinus communis] gi|223526241|gb|EEF28559.1| conserved hypothetical protein [Ricinus communis]

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/220 (57%), Positives = 161/220 (73%), Gaps = 15/220 (6%)

Query: 1   MAQQPSFGGAA--ANPVAVISSHH----PIDLAIVRKVMIFSSGNFDVKDTNGNILFKVK 54
           MA + S   AA  ANPVA+IS  +    P+DLAIVRKV   + GNFDV+D NGNI+FKVK
Sbjct: 1   MATEASGTSAAPLANPVAIISPQYCYPYPVDLAIVRKVWTLADGNFDVQDINGNIIFKVK 60

Query: 55  NVF-AFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSF 113
            +   F+ +++++LD AGN I T+R KAM+ H RWQVFRGES+DP+D+IF+AK  S++  
Sbjct: 61  EILLTFLHKKKLILDPAGNTIVTLRRKAMTAHSRWQVFRGESTDPKDVIFTAKTHSIFYL 120

Query: 114 KTTKLNVFLA-NNTREDVCDFRVVEGSSWLFEPSSCTIYAG--KSSAIVAQMLEKQTVKS 170
           K TKL+VFLA NNT E VCDF+ V+GS   F   SC +YAG   S+ IVAQM +K + +S
Sbjct: 121 K-TKLDVFLANNNTDEKVCDFK-VKGS---FFERSCVVYAGDEDSTTIVAQMHKKHSAQS 175

Query: 171 IFLGKNNFMVTVHPNVDYAFIVALIVILDEINRAGSGSSS 210
           I LGK NF VTV+PN+DYAFIVALIVILD+INR    ++S
Sbjct: 176 ILLGKTNFTVTVYPNIDYAFIVALIVILDDINREAQDAAS 215

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356532197|ref|XP_003534660.1| PREDICTED: protein LURP-one-related 15-like [Glycine max]

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/206 (61%), Positives = 152/206 (73%), Gaps = 13/206 (6%)

Query: 4   QPSFGGAA---ANPVAVISSH----HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNV 56
           QP    +A   A P AVI       +P+DLA+V+KVM  S  NF V D NGNI+FKVK  
Sbjct: 10  QPYPSASAPMPAVPSAVIGPQFCAPYPVDLAVVKKVMTISD-NFVVTDVNGNIVFKVKGS 68

Query: 57  FAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTT 116
            A +R RRVLLD AGNP+ T+R K M+ H RWQ FRGES+D +DLIF+ K SSL  FK T
Sbjct: 69  LATLRDRRVLLDAAGNPLVTLRRKIMTAHDRWQAFRGESTDAKDLIFTLKRSSLIQFK-T 127

Query: 117 KLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKN 176
           KL+VFLANNT+EDVCDF+V    SWL    SC +YAG+S+ IVAQM +K TV+SI +GK+
Sbjct: 128 KLHVFLANNTKEDVCDFKV--KGSWL--ERSCVVYAGESNNIVAQMHKKHTVQSILIGKD 183

Query: 177 NFMVTVHPNVDYAFIVALIVILDEIN 202
           +FMVTV+PN+DYAFIVALIVILDEIN
Sbjct: 184 HFMVTVYPNIDYAFIVALIVILDEIN 209

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506497|ref|XP_003623537.1| hypothetical protein MTR_7g072140 [Medicago truncatula] gi|355498552|gb|AES79755.1| hypothetical protein MTR_7g072140 [Medicago truncatula]

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 120/205 (58%), Positives = 149/205 (72%), Gaps = 9/205 (4%)

Query: 3   QQPSFGGAAANPVAVISSHH----PIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFA 58
           Q  S     A+P A+    +    P+DLA+V+KVM  S GNF V D NGNI+FKVK    
Sbjct: 9   QYASAPPMPAHPTAIFGQQYCAPYPVDLAVVKKVMTISDGNFAVTDVNGNIVFKVKGSLL 68

Query: 59  FMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKL 118
            +R RRVL+D AG PIAT+R K M+ H RW+ FRGES+D +DLIF+ K SSL  FK TKL
Sbjct: 69  TLRDRRVLVDAAGYPIATLRRKIMTMHDRWEAFRGESTDAKDLIFTLKRSSLIQFK-TKL 127

Query: 119 NVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNF 178
           +VFLA+N +E+VCDF+V    SW     SC +YAG+S+ IVAQM +K TV+SI +GK+NF
Sbjct: 128 DVFLASNKKENVCDFKV--KGSWF--DRSCIVYAGESNNIVAQMHKKYTVQSILIGKDNF 183

Query: 179 MVTVHPNVDYAFIVALIVILDEINR 203
           MVT++PNVDYAFIVALIVILDEINR
Sbjct: 184 MVTIYPNVDYAFIVALIVILDEINR 208

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225439608|ref|XP_002266957.1| PREDICTED: protein LURP-one-related 15 [Vitis vinifera]

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 117/216 (54%), Positives = 151/216 (69%), Gaps = 19/216 (8%)

Query: 1   MAQQPSFGG-----AAA-----NPVAVI----SSHHPIDLAIVRKVMIFSSGNFDVKDTN 46
           MA  P+  G     AAA     NP+ V+     + +P+DL IV+K+M  S GNF V D N
Sbjct: 1   MATDPTAAGPVTVPAAAYQPLPNPMTVVGPQFCAQYPVDLVIVKKMMTISDGNFAVTDVN 60

Query: 47  GNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAK 106
           G+++FKVK     +R  RVLLD AG PI +++ K +S HRRWQVFRGESSDP+DL+FS K
Sbjct: 61  GSVIFKVKGTLLSLRDHRVLLDAAGKPIVSLQSKMLSMHRRWQVFRGESSDPKDLLFSTK 120

Query: 107 ISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQ 166
           +SS+   K T L+VFLA NT+E++CDF++    SW     SCT+YAG S+ I+AQM +K 
Sbjct: 121 LSSIIQLK-TGLDVFLAANTKEEICDFKL--KGSWF--DRSCTVYAGNSNTIIAQMHKKH 175

Query: 167 TVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEIN 202
            V+S+ LGK+ F VTV+PNVDYAFIVALIVILDEIN
Sbjct: 176 NVQSVVLGKDTFAVTVYPNVDYAFIVALIVILDEIN 211

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357506501|ref|XP_003623539.1| hypothetical protein MTR_7g072170 [Medicago truncatula] gi|355498554|gb|AES79757.1| hypothetical protein MTR_7g072170 [Medicago truncatula]

 Score =  226 bits (576), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 121/216 (56%), Positives = 155/216 (71%), Gaps = 17/216 (7%)

Query: 4   QPSFGGAAANPVAVISSH---------HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVK 54
           QPS   A+A P+ V+ +          +P+DLA+V+KV+  S GNF V D NGNI+FKVK
Sbjct: 8   QPS---ASAPPMPVLPTTIFGPQYCAPYPLDLAVVKKVIAISDGNFVVTDVNGNIVFKVK 64

Query: 55  NVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFK 114
                 R RRVL+D A NPI T+R K ++ H RW+ +RGES+D +DLIF+ K SSL   K
Sbjct: 65  VSLLTFRDRRVLVDAADNPITTLRRKIVTMHDRWEAYRGESTDSKDLIFTLKRSSLIQMK 124

Query: 115 TTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLG 174
            TKL+VFLANNT+EDVCDF+V    SW FE  SC +YAG+S+ IVAQM +K TV+S+ +G
Sbjct: 125 -TKLDVFLANNTKEDVCDFKV--KGSW-FE-RSCIVYAGESNNIVAQMHKKHTVQSLLIG 179

Query: 175 KNNFMVTVHPNVDYAFIVALIVILDEINRAGSGSSS 210
           K++FMVT++PNVDYAFIVALIVIL+EIN    GS S
Sbjct: 180 KDHFMVTIYPNVDYAFIVALIVILNEINADEKGSES 215

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735581|emb|CBI18075.3| unnamed protein product [Vitis vinifera]

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 107/183 (58%), Positives = 138/183 (75%), Gaps = 5/183 (2%)

Query: 20  SHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIRE 79
           + +P+DL IV+K+M  S GNF V D NG+++FKVK     +R  RVLLD AG PI +++ 
Sbjct: 10  AQYPVDLVIVKKMMTISDGNFAVTDVNGSVIFKVKGTLLSLRDHRVLLDAAGKPIVSLQS 69

Query: 80  KAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGS 139
           K +S HRRWQVFRGESSDP+DL+FS K+SS+   K T L+VFLA NT+E++CDF++    
Sbjct: 70  KMLSMHRRWQVFRGESSDPKDLLFSTKLSSIIQLK-TGLDVFLAANTKEEICDFKL--KG 126

Query: 140 SWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILD 199
           SW     SCT+YAG S+ I+AQM +K  V+S+ LGK+ F VTV+PNVDYAFIVALIVILD
Sbjct: 127 SWF--DRSCTVYAGNSNTIIAQMHKKHNVQSVVLGKDTFAVTVYPNVDYAFIVALIVILD 184

Query: 200 EIN 202
           EIN
Sbjct: 185 EIN 187

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	220
TAIR|locus:2181082	217	AT5G01750 "AT5G01750" [Arabido	0.886	0.898	0.559	3.8e-53
TAIR|locus:2081481	194	AT3G11740 "AT3G11740" [Arabido	0.809	0.917	0.543	8.8e-47
TAIR|locus:2055250	207	LURP1 "AT2G14560" [Arabidopsis	0.813	0.864	0.489	4.2e-40
TAIR|locus:2086062	185	AT3G16900 "AT3G16900" [Arabido	0.659	0.783	0.444	4e-26
TAIR|locus:2078506	204	AT3G56180 "AT3G56180" [Arabido	0.772	0.833	0.368	2.9e-23
TAIR|locus:4515103053	197	AT3G10986 "AT3G10986" [Arabido	0.759	0.847	0.344	1.1e-18
TAIR|locus:2093242	220	AT3G15810 "AT3G15810" [Arabido	0.745	0.745	0.314	3.7e-16
TAIR|locus:2016299	210	AT1G80120 "AT1G80120" [Arabido	0.75	0.785	0.308	7.7e-16
TAIR|locus:2065753	182	AT2G30270 "AT2G30270" [Arabido	0.722	0.873	0.272	1.2e-12
TAIR|locus:2064179	196	AT2G38640 "AT2G38640" [Arabido	0.809	0.908	0.268	6.4e-12

TAIR|locus:2181082 AT5G01750 "AT5G01750" [Arabidopsis thaliana (taxid:3702)]

 Score = 550 (198.7 bits), Expect = 3.8e-53, P = 3.8e-53
 Identities = 113/202 (55%), Positives = 145/202 (71%)

Query:     2 AQQPSFGGAAANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMR 61
             A  P  GG   +P     + +PID+AIVRK+M  + GNF + D NGN+LFKVK     + 
Sbjct:    18 APTPQAGGVVVDPK--YCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLH 75

Query:    62 RRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVF 121
              +RVLLDG+G P+ T+REK +S H RWQVFRG S+D RDL+++ K SS+   KT KL+VF
Sbjct:    76 DKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKT-KLDVF 134

Query:   122 LANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVT 181
             L +N  E  CDFRV +GS WL    SC +YAG+S AIVAQM  K TV+S+FLGK+NF VT
Sbjct:   135 LGHNKDEKRCDFRV-KGS-WL--ERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDNFSVT 190

Query:   182 VHPNVDYAFIVALIVILDEINR 203
             V+PNVDYAFI +L+VILD++NR
Sbjct:   191 VYPNVDYAFIASLVVILDDVNR 212

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0006995 "cellular response to nitrogen starvation" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0030003 "cellular cation homeostasis" evidence=RCA

GO:0070838 "divalent metal ion transport" evidence=RCA

TAIR|locus:2081481 AT3G11740 "AT3G11740" [Arabidopsis thaliana (taxid:3702)]

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 99/182 (54%), Positives = 130/182 (71%)

Query:    22 HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKA 81
             +PI+L IVRKVM  + GNF V D NGN+LFKVK     +  +R+LLD    PI T+RE  
Sbjct:    12 YPIELGIVRKVMTLTDGNFAVTDVNGNLLFKVKEPLFSISDKRILLDAYDTPILTLRENK 71

Query:    82 MSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSW 141
             +S H RW V+RG+S+D  DL+++ K SS+      KL++FLA+N    +CDF V +GS W
Sbjct:    72 VSLHDRWLVYRGKSTDQSDLLYTLKRSSMIQIMKPKLDIFLAHNKEMKICDFHV-KGS-W 129

Query:   142 LFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEI 201
             +    SC +YAGKS AIVAQM +K T +SI +GK+NF VTV+PNVD+AFIV+LIVILD+I
Sbjct:   130 I--DRSCVVYAGKSDAIVAQMHKKHTAQSILIGKSNFSVTVYPNVDFAFIVSLIVILDDI 187

Query:   202 NR 203
             NR
Sbjct:   188 NR 189

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2055250 LURP1 "AT2G14560" [Arabidopsis thaliana (taxid:3702)]

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 90/184 (48%), Positives = 123/184 (66%)

Query:    20 SHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIRE 79
             S +P+ LAIVRKVM  + GNF +   +G +LFKVK+    +  +R+LLD +G  + T+R 
Sbjct:    14 SPNPVGLAIVRKVMKITDGNFVITSADGKLLFKVKDPLFSLHGKRILLDCSGAKVLTLRG 73

Query:    80 KAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGS 139
             K M+ H RWQVFRG S++   L+++ K SS+      KL VFLANN  E +CDF+V +G+
Sbjct:    74 KMMTMHDRWQVFRGGSTEEGALLYTVKRSSMIQL-APKLEVFLANNVEEKICDFKV-KGA 131

Query:   140 SWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILD 199
              WL +  SC +YAG S  I+A M  KQT++  F GK++F VTV  NVDYAFI +LIVIL 
Sbjct:   132 -WLDD--SCVVYAGDSDTIIAHMCGKQTMRGFFFGKDHFSVTVDKNVDYAFIASLIVILV 188

Query:   200 EINR 203
             EI +
Sbjct:   189 EIEK 192

GO:0003674 "molecular_function" evidence=ND

GO:0009751 "response to salicylic acid stimulus" evidence=IEP

GO:0050832 "defense response to fungus" evidence=RCA;IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0045088 "regulation of innate immune response" evidence=RCA

TAIR|locus:2086062 AT3G16900 "AT3G16900" [Arabidopsis thaliana (taxid:3702)]

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 72/162 (44%), Positives = 95/162 (58%)

Query:    42 VKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDL 101
             VKD  GN +FKVK     +  +R+L+D   +PI T++ K  S+H RWQV+RG  SD  D 
Sbjct:    35 VKDATGNKVFKVKTPLFGLHNKRILVDPNDSPIVTMKMKVTSKHDRWQVYRG--SDLDDK 92

Query:   102 IFSAKISSLWSFKTTKLNVFLANN-TREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVA 160
             IF+ K SS    KT ++ VFL +N TRE  CDF  ++G    F   +CTIY   S+ I+A
Sbjct:    93 IFTVKRSSTVQLKT-RVEVFLKHNQTRESSCDF-TIKGR---FMKRACTIYVADSTKIIA 147

Query:   161 QMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEIN 202
             Q+ E         G    + T++PNVDYAFIV LI I D IN
Sbjct:   148 QVYE---------GHERLVATIYPNVDYAFIVTLIFIFDLIN 180

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2078506 AT3G56180 "AT3G56180" [Arabidopsis thaliana (taxid:3702)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 67/182 (36%), Positives = 108/182 (59%)

Query:    22 HPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKA 81
             +P+DL + RKV  FS   ++V D +GN+L ++        R+RV+ D AG  I ++R+K 
Sbjct:    27 YPMDLLVKRKVQNFSKDYYEVFDPSGNLLLQIDGQAWGFNRKRVMRDPAGFTILSMRQKG 86

Query:    82 MSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLA--NNTRE-DVCDFRVVEG 138
             ++   +W+V  GES +  DL+F+ + S   S KT+ ++VFL   NN ++ + CDF    G
Sbjct:    87 LALKNKWEVHGGESKEREDLLFTVQQSQAVSLKTS-VDVFLPENNNVKKTNTCDFHASGG 145

Query:   139 SSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVIL 198
              S +    S  ++  K+ A++A +    T  S   GK NF V V+P VDYAFI+AL+V++
Sbjct:   146 YSNI----SFKVF--KADALIAGV--GFTWGSFCKGKYNFKVRVNPEVDYAFIIALLVMV 197

Query:   199 DE 200
             D+
Sbjct:   198 DD 199

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:4515103053 AT3G10986 "AT3G10986" [Arabidopsis thaliana (taxid:3702)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 64/186 (34%), Positives = 108/186 (58%)

Query:    25 DLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSR 84
             +L + R+        +DV D + N++F V      +RR+RVL D AG P+ ++R K +  
Sbjct:    16 ELVVRRRRESLKRERYDVFDLSNNLIFTVDGGIWNIRRKRVLRDAAGIPLLSMRTKGLVP 75

Query:    85 HR-RWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLA-NNTREDVC----DFRVVE- 137
              R  W+V++G+S++  +L+FSA+  +L SFKT+ L+V L  + +  D+     DF+    
Sbjct:    76 MRYNWEVYKGDSTESDNLLFSAREPNLLSFKTS-LDVTLPPDQSSTDISSVEPDFQTFGR 134

Query:   138 --GSSW-LFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVAL 194
               GSS+ LFEP    I+    + ++A+++   T   +  G  +F V V+P VD+AF+VAL
Sbjct:   135 YIGSSFKLFEP----IH----NTLLAEVVHDFTWGGLIKGSYSFKVRVNPYVDFAFVVAL 186

Query:   195 IVILDE 200
             +VI D+
Sbjct:   187 LVITDD 192

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2093242 AT3G15810 "AT3G15810" [Arabidopsis thaliana (taxid:3702)]

 Score = 201 (75.8 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 56/178 (31%), Positives = 94/178 (52%)

Query:    29 VRKVMIFSSGN-FDVKDTNGNILFKVKNVFAFMRRRR--VLLDGAGNPIATIREKAMSRH 85
             V K  +F +G+ F   D  G+I+F+V +     R     VL+D  G  + T++ K  + H
Sbjct:    35 VCKTSLFYTGDGFAAYDCRGDIIFRVDSYGPDTRDNDEIVLMDATGKCLLTVKRKRPTLH 94

Query:    86 RRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEP 145
             +RW+ F GE S+ +  IFS + SS+    T ++ V+  + T E+     +++G    F  
Sbjct:    95 QRWEGFLGERSEGQKPIFSVRRSSIIGRCTMEVEVY--DGTGEEY----IIDGD---FSQ 145

Query:   146 SSCTIYAGKSSAIVAQMLEKQTVKS-IFLGKNNFMVTVHPNVDYAFIVALIVILDEIN 202
              SC IY  K    VA++  K    + + LG++ F + + P  D AF + L+V+LD+IN
Sbjct:   146 RSCLIYDTKKCT-VAEIKRKVDASTNVMLGRDVFTLEIKPGFDGAFAMGLVVVLDQIN 202

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2016299 AT1G80120 "AT1G80120" [Arabidopsis thaliana (taxid:3702)]

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 55/178 (30%), Positives = 92/178 (51%)

Query:    29 VRKVMIFSSGN-FDVKDTNGNILFKVKNVFAFMRRRR---VLLDGAGNPIATIREKAMSR 84
             VRK  +F +G+ F V D  G+++F+V +      R     VL+D  G  + T+R K  S 
Sbjct:    21 VRKTSLFFAGDGFTVYDCKGSLVFRVDSYGGPNTRDTDEVVLMDAHGRCLLTLRRKRPSL 80

Query:    85 HRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFE 144
              RRW+ + GE SD +  IF  + SS+    +  + V+      +  C   ++EGS   F 
Sbjct:    81 RRRWEGYLGERSDGQKPIFGVRRSSIIGRNSVTVEVY-----GDYQCSEYLIEGS---FG 132

Query:   145 PSSCTIYAGKSSAIVAQMLEKQTVKS-IFLGKNNFMVTVHPNVDYAFIVALIVILDEI 201
               +CT+   ++   VA++  K    + + LGK+ F + V P  D AF + L+++LD+I
Sbjct:   133 ARNCTVVEAETRRKVAEIRRKVDASTNVMLGKDVFSLNVKPGFDGAFAMGLVLVLDQI 190

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2065753 AT2G30270 "AT2G30270" [Arabidopsis thaliana (taxid:3702)]

 Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 48/176 (27%), Positives = 98/176 (55%)

Query:    23 PIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAM 82
             P+DL   +K+   SSG+    D++ +++F ++   + ++    LLD +G P+ +I   + 
Sbjct:    19 PVDLFASKKLPGLSSGDLGFADSSEHLVFILRKSSSSLKS---LLDSSGVPLFSI---SR 72

Query:    83 SRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWL 142
               +  W++ +G+    +DL+ + K +S   F  T+  V  A  + E++    V++G    
Sbjct:    73 LHNGVWELHKGDVEKRKDLVLTVKRTSK-RFSKTESEVSFAGESSENL----VIKGVP-- 125

Query:   143 FEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHP-NVDYAFIVALIVI 197
             F+  SCTIY+  S  IVAQ      ++ I++G++ F +T+ P ++D++ +VA++ I
Sbjct:   126 FQ-KSCTIYSQDS--IVAQTSLMYKLRQIYVGRSKFRLTIFPGSIDHSLVVAMVAI 178

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006863 "purine nucleobase transport" evidence=RCA

TAIR|locus:2064179 AT2G38640 "AT2G38640" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 51/190 (26%), Positives = 96/190 (50%)

Query:    16 AVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIA 75
             ++  S   + L + +K ++F+   F V + NG ++F+V N     R   VL+D +G P+ 
Sbjct:    15 SLCDSKAAVVLTVWKKSLLFNCDGFTVYNANGELVFRVDNYMNCPRDNIVLMDASGFPLL 74

Query:    76 TIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRV 135
             +IR K +S    W V+ GE+   RD IF+A+  ++      K   +++   ++ V     
Sbjct:    75 SIRRKKLSLGDCWMVYDGETE--RDPIFTAR-KNVSIISNRKSLAWVS--AKKTV--LYE 127

Query:   136 VEGSSWLFEPSSCTIY-AGKSSAIVAQMLEKQTV-KSIFLGKNNFMVTVHPNVDYAFIVA 193
             +EGS   +   SC I    ++    A++  K+TV   +  GK+ + + V   ++    +A
Sbjct:   128 IEGS---YGQRSCKILDERRNKKKTAEIKRKETVIGGVAFGKDVYKLIVESEMEPRVAMA 184

Query:   194 LIVILDEINR 203
             L +ILD++ R
Sbjct:   185 LTIILDQMFR 194

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9LZX1	LOR15_ARATH	No assigned EC number	0.5544	0.8863	0.8986	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	220
pfam04525	185	pfam04525, Tub_2, Tubby C 2	5e-46
COG4894	159	COG4894, COG4894, Uncharacterized conserved protei	9e-05

>gnl|CDD|218129 pfam04525, Tub_2, Tubby C 2

 Score =  150 bits (380), Expect = 5e-46
 Identities = 74/180 (41%), Positives = 112/180 (62%), Gaps = 12/180 (6%)

Query: 23  PIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAM 82
           P DL + RK ++F+   F V D+NGN++F+V      +   RVL+D +GNP+ TIR K +
Sbjct: 13  PEDLTVWRKSLVFNGDGFTVYDSNGNLVFRVDGYAFGLSDERVLMDSSGNPLLTIRRKKL 72

Query: 83  SRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNT-----REDVCDFRVVE 137
           S H RW+V+RGE ++ +D +F+ + SS+   K T  +VF   N+      E  CDF  ++
Sbjct: 73  SLHDRWEVYRGEGTEGKDPLFTVRRSSIVQLK-TSSSVFSKRNSNVIVDDEKNCDFD-IK 130

Query: 138 GSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVI 197
           GS       SC IY   S  ++A++ ++QT K +FLGK+ + VTV P VDYAFI+AL+V+
Sbjct: 131 GSFL---DRSCKIYD-DSDKLIAEV-KRQTSKGVFLGKDVYTVTVKPEVDYAFIMALVVV 185

The structure of this family has been solved. It comprises a 12-stranded beta barrel with a central C-terminal alpha helix. This helix is thought to be a transmembrane helix. It is structurally similar to the C-terminal domain of the Tubby protein. In plants it plays a role in defense against pathogens. Length = 185

>gnl|CDD|227231 COG4894, COG4894, Uncharacterized conserved protein [Function unknown]

 Score = 41.3 bits (97), Expect = 9e-05
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 26/174 (14%)

Query: 28  IVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRR 87
            +++ M      F + D +G   FKV+  F  +     + D +G  + +I +K +S   R
Sbjct: 9   FMKQKMFSFGDAFHIYDRDGEEAFKVEGSFFSIGDTLTITDASGKTLVSIEQKLLSLLPR 68

Query: 88  WQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSS 147
           +++  G  +                 +  K   F  +    D  ++  + G+ W  E   
Sbjct: 69  YEISDGGGT---------------VCEVRKKVTFSRDKFEIDGLNWE-IHGNIWDDE--- 109

Query: 148 CTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEI 201
             +  G++  + A++      K  F  ++ + + V P+ D   I+A+ V LD +
Sbjct: 110 FKLTDGEN--VRAEV-----SKKWFSWRDTYHLQVAPDEDALLIIAIAVALDMV 156

Length = 159

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	220
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	100.0
COG4894	159	Uncharacterized conserved protein [Function unknow	100.0
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	99.7
KOG0621	292	consensus Phospholipid scramblase [Cell wall/membr	98.43
COG4894	159	Uncharacterized conserved protein [Function unknow	98.41
PF04525	187	Tub_2: Tubby C 2; InterPro: IPR007612 This is a fa	98.09
PF03803	221	Scramblase: Scramblase ; InterPro: IPR005552 Scram	96.54

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=100.00  E-value=7.3e-42  Score=283.48  Aligned_cols=171  Identities=35%  Similarity=0.657  Sum_probs=104.5

Q ss_pred             CccEEEEEEEeeeeEecCCeEEEcCCCCEEEEEEe-eccCccceEEEEcCCCCceEEEEeccccccceEEEEEcCCCCCC
Q 044780           21 HHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKN-VFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPR   99 (220)
Q Consensus        21 ~~~~~l~vk~k~~s~~~~~f~V~D~~G~~vf~V~g-~~~s~~~k~~l~D~~G~pL~~i~~k~ls~~~~w~v~~g~~~~~~   99 (220)
                      ++|++|+||+|.+++++++|+|+|++|+++|+|+| +.+++++++.|+|++|+||++|++|.++++++|++|++++.+..
T Consensus        11 ~~~~~l~v~~k~~~~~~~~f~V~D~~G~~vf~V~g~~~~s~~~~~~l~D~~G~~L~~i~~k~~~l~~~w~i~~~~~~~~~   90 (187)
T PF04525_consen   11 PQPVTLTVKKKSLSFSGDDFTVYDENGNVVFRVDGGKFFSIGKKRTLMDASGNPLFTIRRKLFSLRPTWEIYRGGGSEGK   90 (187)
T ss_dssp             SS-EEEEEE----------EEEEETTS-EEEEEE--SCTTBTTEEEEE-TTS-EEEEEE--------EEEEEETT---GG
T ss_pred             CCceEEEEEEEEeeecCCCEEEEcCCCCEEEEEEEecccCCCCEEEEECCCCCEEEEEEeeecccceEEEEEECCCCccC
Confidence            68999999999999989999999999999999999 89999999999999999999999999999999999999865455


Q ss_pred             ceEEEEEEccccccccceEEEEEcCCC-----CCceeeEEEeecCCcCcCCCeeEEEeCCCCceeEEEEeeeeceeeecc
Q 044780          100 DLIFSAKISSLWSFKTTKLNVFLANNT-----REDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLG  174 (220)
Q Consensus       100 ~~l~tvkk~~~~~~~k~~~~V~~~~~~-----~~~~~~~~v~~G~~~~~~~~~~~I~~~~~~~~VAeV~rk~~~~~~~~g  174 (220)
                      +++|++|+++.+.. ++++.+++...+     .++.++|+| +| +||  +++|+|++. +|++||+|+||+..+.++.|
T Consensus        91 ~~i~tvkk~~~~~~-~~~~~~f~~~~~~~~~~~~~~~~~~i-~G-~~~--~~~~~I~~~-~g~~VA~i~rk~~~k~~~~~  164 (187)
T PF04525_consen   91 KPIFTVKKKSMLQN-KDSFDVFLPPKSNISIDDSEGPDFEI-KG-NFW--DRSFTIYDS-GGRVVAEISRKYSSKKWFSG  164 (187)
T ss_dssp             GEEEEEE-----------EEEEET--T----------SEEE-ES--TT--TT--EEEEC-C--EEEEEEE----------
T ss_pred             ceEEEEEEecccCC-CcceeEEEecccceeecCCCCceEEE-EE-Eec--CcEEEEEEc-CCCEEEEEecccceeeEEec
Confidence            78999999866665 888899987432     356789999 99 999  999999953 38999999999887788999


Q ss_pred             eeeEEEEEeCCCCHHHHHHHHHH
Q 044780          175 KNNFMVTVHPNVDYAFIVALIVI  197 (220)
Q Consensus       175 ~dty~v~V~pgvD~ali~alvi~  197 (220)
                      +|+|.|+|+||+|++||+|||||
T Consensus       165 ~dty~l~V~pg~D~~lv~alvvi  187 (187)
T PF04525_consen  165 RDTYTLTVAPGVDQALVVALVVI  187 (187)
T ss_dssp             B-SEEEEE-TTSBHHHHHHHHHH
T ss_pred             CcEEEEEEcCCCCHHHheeEEeC
Confidence            99999999999999999999997

; PDB: 1ZXU_A 2Q4M_A.

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=1.7e-35  Score=231.38  Aligned_cols=154  Identities=21%  Similarity=0.383  Sum_probs=141.3

Q ss_pred             EEEEEEEeeeeEecCCeEEEcCCCCEEEEEEeeccCccceEEEEcCCCCceEEEEeccccccceEEEEEcCCCCCCceEE
Q 044780           24 IDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIF  103 (220)
Q Consensus        24 ~~l~vk~k~~s~~~~~f~V~D~~G~~vf~V~g~~~s~~~k~~l~D~~G~pL~~i~~k~ls~~~~w~v~~g~~~~~~~~l~  103 (220)
                      .+|.||||++++ +++|.|+|..|+.+|+|+|+++++++.++|.|++|.+|.+|++|+++++++|+|-.|+    +. +|
T Consensus         6 ~tl~mkQk~~~~-gd~f~I~d~dgE~af~VeGs~f~i~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~----g~-~~   79 (159)
T COG4894           6 ITLFMKQKMFSF-GDAFHIYDRDGEEAFKVEGSFFSIGDTLTITDASGKTLVSIEQKLLSLLPRYEISDGG----GT-VC   79 (159)
T ss_pred             HhHhhhhhhhhc-ccceEEECCCCcEEEEEeeeEEeeCceEEEEecCCCChHHHHHHHhhccceeEEEcCC----CC-EE
Confidence            478999999888 5699999999999999999999999999999999999999999999999999999987    23 88


Q ss_pred             EEEEccccccccceEEEEEcCCCCCceeeEEEeecCCcCcCCCeeEEEeCCCCceeEEEEeeeeceeeecceeeEEEEEe
Q 044780          104 SAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVTVH  183 (220)
Q Consensus       104 tvkk~~~~~~~k~~~~V~~~~~~~~~~~~~~v~~G~~~~~~~~~~~I~~~~~~~~VAeV~rk~~~~~~~~g~dty~v~V~  183 (220)
                      .++|+  ++|+|+++++..        .+|++ +| |+|  +.+|++.++  ++++|+|+|||     ++|+|||.|+|+
T Consensus        80 ~vrKK--~tf~Rdk~e~d~--------~~~ei-hG-Ni~--d~efkl~dg--~~~~aeVsKkw-----f~~rdTY~l~va  138 (159)
T COG4894          80 EVRKK--VTFSRDKFEIDG--------LNWEI-HG-NIW--DDEFKLTDG--ENVRAEVSKKW-----FSWRDTYHLQVA  138 (159)
T ss_pred             EEEEE--EEEEeeeEEEcC--------CCeEE-ec-cee--ceEEEEecC--Cceehhheeee-----EeccceEEEEEc
Confidence            88887  677777777643        25999 99 999  999999999  78999999999     899999999999


Q ss_pred             CCCCHHHHHHHHHHhhhhhhc
Q 044780          184 PNVDYAFIVALIVILDEINRA  204 (220)
Q Consensus       184 pgvD~ali~alvi~lD~~~~~  204 (220)
                      |+.|..+|+++||++|++.++
T Consensus       139 pde~a~lii~i~VaLD~v~~~  159 (159)
T COG4894         139 PDEDALLIIAIAVALDMVLYN  159 (159)
T ss_pred             CchhhHHHHHHHHHHHHHhcC
Confidence            999999999999999999763

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=99.70  E-value=4.6e-15  Score=125.56  Aligned_cols=170  Identities=18%  Similarity=0.248  Sum_probs=133.6

Q ss_pred             ccEEEEEEEeeeeE-------ecCCeEEEcCCCCEEEEEEeecc---------CccceEEEEcCCCCceEEEEecccc--
Q 044780           22 HPIDLAIVRKVMIF-------SSGNFDVKDTNGNILFKVKNVFA---------FMRRRRVLLDGAGNPIATIREKAMS--   83 (220)
Q Consensus        22 ~~~~l~vk~k~~s~-------~~~~f~V~D~~G~~vf~V~g~~~---------s~~~k~~l~D~~G~pL~~i~~k~ls--   83 (220)
                      .--.++|+|+...+       ..+.|.|+|.+|+.+|.+....-         ..+-+..|+|..|+++++|+|..--  
T Consensus        20 ~~~~l~I~Q~~e~~e~~~~~e~~N~Y~I~n~~g~~i~~~~E~s~~~~R~~~~~~R~f~~~i~D~~g~~vl~i~Rp~~c~~   99 (221)
T PF03803_consen   20 GLDQLLIKQQIEPLEIFTGFETPNRYDIKNPNGQQIYYAVEESDCCSRQCCGSHRPFKMHIYDNYGREVLTIERPFKCCS   99 (221)
T ss_pred             CCCEEEEEEEEEEeceecccccCceEEEECCCCCEEEEEEEeCcceeeeecCCCCCEEEEEEecCCCEEEEEEcCCccee
Confidence            44577888887643       35799999999999998876521         1234678999999999999986421  


Q ss_pred             ----ccceEEEEEcCCCCCCceEEEEEEccccccccceEEEEEcCCCCCceeeEEEeecCCcC----cCCCeeEEEeCCC
Q 044780           84 ----RHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWL----FEPSSCTIYAGKS  155 (220)
Q Consensus        84 ----~~~~w~v~~g~~~~~~~~l~tvkk~~~~~~~k~~~~V~~~~~~~~~~~~~~v~~G~~~~----~~~~~~~I~~~~~  155 (220)
                          ...+.+|+.+.    ++++.+|+++  +++++++|+|.-.+.    ...+.| +| .+.    +.+++|.|++.+ 
T Consensus       100 C~~~~~~~~~V~~p~----g~~iG~I~q~--~~~~~~~f~I~d~~~----~~~~~I-~g-p~~~~~~~~~~~F~I~~~~-  166 (221)
T PF03803_consen  100 CCPCCLQEMEVESPP----GNLIGSIRQP--FSCCRPNFDIFDANG----NPIFTI-KG-PCCCCSCCCDWEFEIKDPN-  166 (221)
T ss_pred             cccccceeEEEecCC----CcEEEEEEEc--CcccceEEEEEECCC----ceEEEE-eC-Ccceeccccceeeeeeccc-
Confidence                13566776664    6899999987  788899999987653    467899 99 633    238999999963 


Q ss_pred             CceeEEEEeeee--ceeeecceeeEEEEEeCCCCH---HHHHHHHHHhhhhhhc
Q 044780          156 SAIVAQMLEKQT--VKSIFLGKNNFMVTVHPNVDY---AFIVALIVILDEINRA  204 (220)
Q Consensus       156 ~~~VAeV~rk~~--~~~~~~g~dty~v~V~pgvD~---ali~alvi~lD~~~~~  204 (220)
                      |+.||+|+|+|.  .++.+...|+|.|+..+..|.   ++++|.++.||.++-+
T Consensus       167 ~~~vg~I~k~w~G~~~e~~t~~d~f~i~Fp~~l~~~~Kalll~a~~liD~~~Fe  220 (221)
T PF03803_consen  167 GQEVGSITKKWSGFCRELFTDADNFVIEFPPDLDVEQKALLLGAAFLIDYMYFE  220 (221)
T ss_pred             CcEEEEEEEecCCcchhhccccceEEEEcCCCCCHHHHHHHHHHHHHhhhhhhc
Confidence            799999999996  346778899999999999885   7999999999998754

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

>KOG0621 consensus Phospholipid scramblase [Cell wall/membrane/envelope biogenesis]

Probab=98.43  E-value=8e-06  Score=72.25  Aligned_cols=161  Identities=16%  Similarity=0.234  Sum_probs=109.8

Q ss_pred             ecCCeEEEcCCCCEEEEEEeec---------cCccceEEEEcCCCCceEEEEeccccccc--------eEEEEEcCCCCC
Q 044780           36 SSGNFDVKDTNGNILFKVKNVF---------AFMRRRRVLLDGAGNPIATIREKAMSRHR--------RWQVFRGESSDP   98 (220)
Q Consensus        36 ~~~~f~V~D~~G~~vf~V~g~~---------~s~~~k~~l~D~~G~pL~~i~~k~ls~~~--------~w~v~~g~~~~~   98 (220)
                      +.+.|.|.|.+|+.+|.+-...         ...+-...++|.-|+++++++|...-...        ..++-.+    .
T Consensus        97 t~NRY~v~~~~g~~v~~~~E~S~~~~Rq~~g~~RpF~~~i~D~~g~eVl~~~R~~~c~~~~c~~~~~~~~~v~~p----~  172 (292)
T KOG0621|consen   97 TANRYVVHDMYGQPLYYAMERSNVFARQYLGTHRPFAMRIMDNFGQEVLTCKRPFPCCSSACALCLAQEIEIQSP----P  172 (292)
T ss_pred             cCcEEEEEcCCcChhHHHHhhchHHHHHhhccCCcceeEeecccCcEEEEEeccccccccccccccccEEEEEcC----C
Confidence            5789999999999998554421         12345789999999999999998633221        1112111    2


Q ss_pred             CceEEEEEEccccccccceEEEEEcCCCCCceeeEEEeecCCcC----cCCCeeEEEeCCCCceeEEEEeeee--ceeee
Q 044780           99 RDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWL----FEPSSCTIYAGKSSAIVAQMLEKQT--VKSIF  172 (220)
Q Consensus        99 ~~~l~tvkk~~~~~~~k~~~~V~~~~~~~~~~~~~~v~~G~~~~----~~~~~~~I~~~~~~~~VAeV~rk~~--~~~~~  172 (220)
                      ...+-++...  +....++++|.-..    ....+.| +|..++    +++..|.+...++++.|++|.|+|.  ..+.+
T Consensus       173 ~~~lG~v~q~--~~~~~~~f~i~~~~----~~~v~~v-~gp~~~~~~~~~d~~f~~~~~d~~~~vg~I~k~w~g~~rE~f  245 (292)
T KOG0621|consen  173 MGLLGKVLQT--WGCVNPNFHLWDRD----GNLVFLV-EGPRCCTFACCDDTVFFPKTTDNGRIVGSISRKWAGLVREAF  245 (292)
T ss_pred             CceEEEEEEe--eccccceEEEEccc----ceeEEEE-EcCceeEEEeecCcceeEEEcCCCeEEEEEeecccchhhhhe
Confidence            3456555544  33446677775321    2345666 662122    1155666665556899999999996  45788


Q ss_pred             cceeeEEEEEeCCCCH---HHHHHHHHHhhhhhhcCCC
Q 044780          173 LGKNNFMVTVHPNVDY---AFIVALIVILDEINRAGSG  207 (220)
Q Consensus       173 ~g~dty~v~V~pgvD~---ali~alvi~lD~~~~~~~~  207 (220)
                      .+.|+|.|.---.+|.   ++++|.++-||.+.-+.++
T Consensus       246 TDad~f~v~FPldLdvk~kavllga~flID~~~Fe~~~  283 (292)
T KOG0621|consen  246 TDADTFVVHFPLDLDVKLKALLLGSTFLIDYMSFESRG  283 (292)
T ss_pred             eccceeeEecCCcCCHHHHhhhhhheeeEEEEEEecCC
Confidence            9999999998877775   7899999999999888775

>COG4894 Uncharacterized conserved protein [Function unknown]

Probab=98.41  E-value=1.1e-06  Score=69.65  Aligned_cols=104  Identities=12%  Similarity=0.246  Sum_probs=78.7

Q ss_pred             EEeCCCccEEEEEEEeeeeEecCCeEEEcCCCCEEEEEEeeccCccceEEEEcCCCCceEEEEeccccccceEEEEEcC-
Q 044780           16 AVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGE-   94 (220)
Q Consensus        16 ~vv~~~~~~~l~vk~k~~s~~~~~f~V~D~~G~~vf~V~g~~~s~~~k~~l~D~~G~pL~~i~~k~ls~~~~w~v~~g~-   94 (220)
                      .+-.+..+..+.|+-+.++. ++.|+|+|+.|.+++.++.+.+++..+..|.|++|+ ++.+++|...++++|++-.-+ 
T Consensus        22 ~I~d~dgE~af~VeGs~f~i-~dtlti~Da~G~~l~~i~~kll~l~~~yeI~d~~g~-~~~vrKK~tf~Rdk~e~d~~~~   99 (159)
T COG4894          22 HIYDRDGEEAFKVEGSFFSI-GDTLTITDASGKTLVSIEQKLLSLLPRYEISDGGGT-VCEVRKKVTFSRDKFEIDGLNW   99 (159)
T ss_pred             EEECCCCcEEEEEeeeEEee-CceEEEEecCCCChHHHHHHHhhccceeEEEcCCCC-EEEEEEEEEEEeeeEEEcCCCe
Confidence            34444678999999888888 458999999999999999999999999999999999 899999876668888873211 


Q ss_pred             ---C---------CCCCceEEEEEEccccccccceEEEEEc
Q 044780           95 ---S---------SDPRDLIFSAKISSLWSFKTTKLNVFLA  123 (220)
Q Consensus        95 ---~---------~~~~~~l~tvkk~~~~~~~k~~~~V~~~  123 (220)
                         +         .++++..+++.|+ +++. +..|.+.++
T Consensus       100 eihGNi~d~efkl~dg~~~~aeVsKk-wf~~-rdTY~l~va  138 (159)
T COG4894         100 EIHGNIWDDEFKLTDGENVRAEVSKK-WFSW-RDTYHLQVA  138 (159)
T ss_pred             EEecceeceEEEEecCCceehhheee-eEec-cceEEEEEc
Confidence               0         1234566666654 3343 666666664

>PF04525 Tub_2: Tubby C 2; InterPro: IPR007612 This is a family of plant and bacterial uncharacterised proteins

Probab=98.09  E-value=3e-05  Score=64.12  Aligned_cols=101  Identities=21%  Similarity=0.360  Sum_probs=53.0

Q ss_pred             EEeCCCccEEEEEEE-eeeeEecCCeEEEcCCCCEEEEEEeeccCccceEEEEcCCCC----ceEEEEec-cccccceEE
Q 044780           16 AVISSHHPIDLAIVR-KVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGN----PIATIREK-AMSRHRRWQ   89 (220)
Q Consensus        16 ~vv~~~~~~~l~vk~-k~~s~~~~~f~V~D~~G~~vf~V~g~~~s~~~k~~l~D~~G~----pL~~i~~k-~ls~~~~w~   89 (220)
                      .|.++.....|+|+. +.+++. +...|+|.+|+++++++-+.+++..+..++++++.    +|++|+++ .+..++...
T Consensus        31 ~V~D~~G~~vf~V~g~~~~s~~-~~~~l~D~~G~~L~~i~~k~~~l~~~w~i~~~~~~~~~~~i~tvkk~~~~~~~~~~~  109 (187)
T PF04525_consen   31 TVYDENGNVVFRVDGGKFFSIG-KKRTLMDASGNPLFTIRRKLFSLRPTWEIYRGGGSEGKKPIFTVKKKSMLQNKDSFD  109 (187)
T ss_dssp             EEEETTS-EEEEEE--SCTTBT-TEEEEE-TTS-EEEEEE--------EEEEEETT---GGGEEEEEE----------EE
T ss_pred             EEEcCCCCEEEEEEEecccCCC-CEEEEECCCCCEEEEEEeeecccceEEEEEECCCCccCceEEEEEEecccCCCccee
Confidence            344446689999999 788885 59999999999999999999999999999999998    59999999 445555566


Q ss_pred             EEEcCCC-----CCCceEEEEEEccccccccceEEEE
Q 044780           90 VFRGESS-----DPRDLIFSAKISSLWSFKTTKLNVF  121 (220)
Q Consensus        90 v~~g~~~-----~~~~~l~tvkk~~~~~~~k~~~~V~  121 (220)
                      +|.+...     ..+.+-++++-.    ++..+++|+
T Consensus       110 ~f~~~~~~~~~~~~~~~~~~i~G~----~~~~~~~I~  142 (187)
T PF04525_consen  110 VFLPPKSNISIDDSEGPDFEIKGN----FWDRSFTIY  142 (187)
T ss_dssp             EEET--T----------SEEEES-----TTTT--EEE
T ss_pred             EEEecccceeecCCCCceEEEEEE----ecCcEEEEE
Confidence            6665211     123455666643    225567776

; PDB: 1ZXU_A 2Q4M_A.

>PF03803 Scramblase: Scramblase ; InterPro: IPR005552 Scramblase is palmitoylated and contains a potential protein kinase C phosphorylation site

Probab=96.54  E-value=0.038  Score=46.51  Aligned_cols=65  Identities=18%  Similarity=0.311  Sum_probs=50.8

Q ss_pred             eEEEcCCCCEEEEEEeeccC------ccceEEEEcCCCCceEEEEeccccccceEEEEEcCCCCCCceEEEEEEc
Q 044780           40 FDVKDTNGNILFKVKNVFAF------MRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKIS  108 (220)
Q Consensus        40 f~V~D~~G~~vf~V~g~~~s------~~~k~~l~D~~G~pL~~i~~k~ls~~~~w~v~~g~~~~~~~~l~tvkk~  108 (220)
                      ..|+|.+|+.+++++-...-      ...+..+.++.|++|-+|+++.-.+.+.++|++.+    ++++++|+.+
T Consensus        78 ~~i~D~~g~~vl~i~Rp~~c~~C~~~~~~~~~V~~p~g~~iG~I~q~~~~~~~~f~I~d~~----~~~~~~I~gp  148 (221)
T PF03803_consen   78 MHIYDNYGREVLTIERPFKCCSCCPCCLQEMEVESPPGNLIGSIRQPFSCCRPNFDIFDAN----GNPIFTIKGP  148 (221)
T ss_pred             EEEEecCCCEEEEEEcCCcceecccccceeEEEecCCCcEEEEEEEcCcccceEEEEEECC----CceEEEEeCC
Confidence            46889999999999865321      23677788999999999998866678889999876    4678888865

Scramblase exhibits Ca2+-activated phospholipid scrambling activity in vitro. There are also possible SH3 and WW binding motifs. Scramblase is involved in the redistribution of phospholipids after cell activation or injury [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	220
1zxu_A	217	X-Ray Structure Of Protein From Arabidopsis Thalian		4e-56

>pdb|1ZXU|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At5g01750 Length = 217

Iteration: 1
 Score =  214 bits (544), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 110/202 (54%), Positives = 138/202 (68%), Gaps = 7/202 (3%)
Query: 2   AQQPSFGGAAANPVAVISSHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMR 61
           A  P  GG   +P     + +PID AIVRK    + GNF + D NGN+LFKVK     + 
Sbjct: 18  APTPQAGGVVVDPK--YCAPYPIDXAIVRKXXSLTDGNFVITDVNGNLLFKVKEPVFGLH 75
Query: 62  RRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVF 121
            +RVLLDG+G P+ T+REK +S H RWQVFRG S+D RDL+++ K SS    K TKL+VF
Sbjct: 76  DKRVLLDGSGTPVVTLREKXVSXHDRWQVFRGGSTDQRDLLYTVKRSSXLQLK-TKLDVF 134
Query: 122 LANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNNFMVT 181
           L +N  E  CDFRV    SWL    SC +YAG+S AIVAQ   K TV+S+FLGK+NF VT
Sbjct: 135 LGHNKDEKRCDFRV--KGSWL--ERSCVVYAGESDAIVAQXHRKHTVQSVFLGKDNFSVT 190
Query: 182 VHPNVDYAFIVALIVILDEINR 203
           V+PNVDYAFI +L+VILD++NR
Sbjct: 191 VYPNVDYAFIASLVVILDDVNR 212

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	220
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	2e-57
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A Length = 217

 Score =  179 bits (456), Expect = 2e-57
 Identities = 109/211 (51%), Positives = 142/211 (67%), Gaps = 9/211 (4%)

Query: 2   AQQPSFGGAAANPVAVIS----SHHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVF 57
              PS          V+     + +PID+AIVRK+M  + GNF + D NGN+LFKVK   
Sbjct: 12  GSGPSGAPTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPV 71

Query: 58  AFMRRRRVLLDGAGNPIATIREKAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTK 117
             +  +RVLLDG+G P+ T+REK +S H RWQVFRG S+D RDL+++ K SS+   K TK
Sbjct: 72  FGLHDKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLK-TK 130

Query: 118 LNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIVAQMLEKQTVKSIFLGKNN 177
           L+VFL +N  E  CDFR V+GS       SC +YAG+S AIVAQM  K TV+S+FLGK+N
Sbjct: 131 LDVFLGHNKDEKRCDFR-VKGSWL---ERSCVVYAGESDAIVAQMHRKHTVQSVFLGKDN 186

Query: 178 FMVTVHPNVDYAFIVALIVILDEINRAGSGS 208
           F VTV+PNVDYAFI +L+VILD++NR    +
Sbjct: 187 FSVTVYPNVDYAFIASLVVILDDVNREDRAA 217

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 41.8 bits (97), Expect = 1e-04
 Identities = 23/166 (13%), Positives = 47/166 (28%), Gaps = 34/166 (20%)

Query: 29  VRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNP--IATIREKAMSRHR 86
               +   S      +    +L K  +       R VL     NP  ++ I E       
Sbjct: 287 THISLDHHSMTLTPDEVKS-LLLKYLDCRPQDLPREVL---TTNPRRLSIIAESIRDGLA 342

Query: 87  RWQVFRGESSDPRDLIFSAKISSLWS------FKTTKLNVFLANNTREDVCDFRVVEGSS 140
            W  ++  + D    I  + ++ L        F   +L+VF                   
Sbjct: 343 TWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFD--RLSVF-----PPSA---------- 385

Query: 141 WLFEPSS--CTIYAGKSSAIVAQMLEKQTVKS-IFLGKNNFMVTVH 183
            +  P+     I+     + V  ++ K    S +        +++ 
Sbjct: 386 HI--PTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIP 429

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.2 bits (93), Expect = 3e-04
 Identities = 33/233 (14%), Positives = 68/233 (29%), Gaps = 85/233 (36%)

Query: 46  NGNILFKVKNVF---AFMRRRRVLLD-------------GAGNP---IATIREKAMSRHR 86
           N N +F   NV     +++ R+ LL+             G+G     +       +    
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM 180

Query: 87  RWQVF---RGESSDPRDLI-----FSAKISSLWSFKT--------------TKLNVFLAN 124
            +++F       + P  ++        +I   W+ ++               +L   L +
Sbjct: 181 DFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS 240

Query: 125 NTRE-------DVCDFRVVEGSSWLFEPSSCTI-----YAGKSSAIVAQ----------- 161
              E       +V + +        F   SC I     +   +  + A            
Sbjct: 241 KPYENCLLVLLNVQNAKAWNA----FNL-SCKILLTTRFKQVTDFLSAATTTHISLDHHS 295

Query: 162 -MLEKQTVKSIF---LGKNNF-----MVTVHPNVDYAFIVALI--VILDEINR 203
             L    VKS+    L          ++T +P       +++I   I D +  
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-----RRLSIIAESIRDGLAT 343

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	220
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	100.0
1zxu_A	217	AT5G01750 protein; PFAM PF01167, TULP, structural	98.25

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=100.00  E-value=1.8e-45  Score=310.27  Aligned_cols=199  Identities=55%  Similarity=0.901  Sum_probs=146.8

Q ss_pred             CCCCCCCCCCceEEeCC----CccEEEEEEEeeeeEecCCeEEEcCCCCEEEEEEeeccCccceEEEEcCCCCceEEEEe
Q 044780            4 QPSFGGAAANPVAVISS----HHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGNPIATIRE   79 (220)
Q Consensus         4 ~~~~~~~~~~pv~vv~~----~~~~~l~vk~k~~s~~~~~f~V~D~~G~~vf~V~g~~~s~~~k~~l~D~~G~pL~~i~~   79 (220)
                      .|+.-+|+.+|++||++    +++++|+||||+++|++++|+|+|++|+++|+|+++.++++.++.|+|++|+||++|++
T Consensus        14 ~~~~~~~~~~~~~vv~~~~~~~~~~~l~vkqk~~~~~~~~f~V~D~~G~~vf~V~~~~~~~~~~~~l~D~~G~~l~~i~r   93 (217)
T 1zxu_A           14 GPSGAPTPQAGGVVVDPKYCAPYPIDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLRE   93 (217)
T ss_dssp             ----------CCCSSCGGGBCSSCEEEEEECC-----CCCEEEEETTSCEEEEEECSSTTCCSEEEEECTTSCEEEEEEC
T ss_pred             CCCCCCCCCCcEEEECccccCCCCcEEEEEEEEeEeeCCCEEEEeCCCCEEEEEEccccCCCCEEEEECCCCCEEEEEEc
Confidence            35666677789999965    68999999999999998899999999999999999999999999999999999999999


Q ss_pred             ccccccceEEEEEcCCCCCCceEEEEEEccccccccceEEEEEcCCCCCceeeEEEeecCCcCcCCCeeEEEeCCCCcee
Q 044780           80 KAMSRHRRWQVFRGESSDPRDLIFSAKISSLWSFKTTKLNVFLANNTREDVCDFRVVEGSSWLFEPSSCTIYAGKSSAIV  159 (220)
Q Consensus        80 k~ls~~~~w~v~~g~~~~~~~~l~tvkk~~~~~~~k~~~~V~~~~~~~~~~~~~~v~~G~~~~~~~~~~~I~~~~~~~~V  159 (220)
                      |.++++++|++|+++..+.++++|++|+++.++ ++++++|++.+++.++.++|+| +| +|+  +++|+|+++++|++|
T Consensus        94 k~~~~~~~~~v~~~~~~~~~~~i~~vrk~~~~~-~~~~~~V~~~~~~~~~~~~~~I-~G-~~~--~~~f~I~~~~~~~~V  168 (217)
T 1zxu_A           94 KMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQ-LKTKLDVFLGHNKDEKRCDFRV-KG-SWL--ERSCVVYAGESDAIV  168 (217)
T ss_dssp             ------CEEEEEETTCCCGGGEEEEEEC--------CCEEEEETTCCC-CCCSEEE-ES-CTT--TTCCEEEETTTCCEE
T ss_pred             cccccCcEEEEEcCCCCCCCcEEEEEEEecccc-CCCeEEEEECCCCCCCceEEEE-EE-eEe--CCEEEEEECCCCEEE
Confidence            999999999999987543346899999876567 5999999998755556689999 99 999  999999998557999


Q ss_pred             EEEEeeeeceeeecceeeEEEEEeCCCCHHHHHHHHHHhhhhhhcCCC
Q 044780          160 AQMLEKQTVKSIFLGKNNFMVTVHPNVDYAFIVALIVILDEINRAGSG  207 (220)
Q Consensus       160 AeV~rk~~~~~~~~g~dty~v~V~pgvD~ali~alvi~lD~~~~~~~~  207 (220)
                      |+|+|+|++++++.++|+|.|+|.|++|.+|++|+|+|||+|++++++
T Consensus       169 a~I~kk~~~~~~~~~~D~y~l~V~p~~D~aliialvv~iD~~~~~~~~  216 (217)
T 1zxu_A          169 AQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVILDDVNREDRA  216 (217)
T ss_dssp             EEEEEC--------CBCSEEEEECTTSBHHHHHHHHHHHHHHHC----
T ss_pred             EEEEeeeeccccccCCcEEEEEECCCCCHHHHHHHHHHHHHhhhhccC
Confidence            999999988888999999999999999999999999999999998764

>1zxu_A AT5G01750 protein; PFAM PF01167, TULP, structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 1.70A {Arabidopsis thaliana} SCOP: d.23.1.2 PDB: 2q4m_A

Probab=98.25  E-value=4.5e-06  Score=69.36  Aligned_cols=98  Identities=15%  Similarity=0.239  Sum_probs=68.5

Q ss_pred             CccEEEEEEEeeeeEecCCeEEEcCCCCEEEEEEeeccCccceEEEEcCCCC----ceEEEEec-cccccceEEEEEcCC
Q 044780           21 HHPIDLAIVRKVMIFSSGNFDVKDTNGNILFKVKNVFAFMRRRRVLLDGAGN----PIATIREK-AMSRHRRWQVFRGES   95 (220)
Q Consensus        21 ~~~~~l~vk~k~~s~~~~~f~V~D~~G~~vf~V~g~~~s~~~k~~l~D~~G~----pL~~i~~k-~ls~~~~w~v~~g~~   95 (220)
                      .....|+|+.+.++++ +.+.|+|.+|+++++++-+.+++..+..++++.+.    ||++|+++ .+++++.|+|+.++.
T Consensus        60 ~G~~vf~V~~~~~~~~-~~~~l~D~~G~~l~~i~rk~~~~~~~~~v~~~~~~~~~~~i~~vrk~~~~~~~~~~~V~~~~~  138 (217)
T 1zxu_A           60 NGNLLFKVKEPVFGLH-DKRVLLDGSGTPVVTLREKMVSMHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFLGHN  138 (217)
T ss_dssp             TSCEEEEEECSSTTCC-SEEEEECTTSCEEEEEEC------CEEEEEETTCCCGGGEEEEEEC-------CCEEEEETTC
T ss_pred             CCCEEEEEEccccCCC-CEEEEECCCCCEEEEEEccccccCcEEEEEcCCCCCCCcEEEEEEEeccccCCCeEEEEECCC
Confidence            4578999999877775 59999999999999999999999999999998875    79999987 356889999998754


Q ss_pred             CCCCceEEEEEEccccccccceEEEEEc
Q 044780           96 SDPRDLIFSAKISSLWSFKTTKLNVFLA  123 (220)
Q Consensus        96 ~~~~~~l~tvkk~~~~~~~k~~~~V~~~  123 (220)
                      ...+.+.++++-.    ++...|+|...
T Consensus       139 ~~~~~~~~~I~G~----~~~~~f~I~~~  162 (217)
T 1zxu_A          139 KDEKRCDFRVKGS----WLERSCVVYAG  162 (217)
T ss_dssp             CC-CCCSEEEESC----TTTTCCEEEET
T ss_pred             CCCCceEEEEEEe----EeCCEEEEEEC
Confidence            3333567787743    33667888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	220
d2q4ma1	189	d.23.1.2 (A:24-212) Hypothetical protein At5g01750	4e-57

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	220
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	100.0
d2q4ma1	189	Hypothetical protein At5g01750 {Thale cress (Arabi	98.1