Citrus Sinensis ID: 044821
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 145 | ||||||
| 296087548 | 165 | unnamed protein product [Vitis vinifera] | 1.0 | 0.878 | 0.882 | 2e-67 | |
| 147782968 | 351 | hypothetical protein VITISV_029272 [Viti | 1.0 | 0.413 | 0.889 | 6e-67 | |
| 225464748 | 351 | PREDICTED: zinc transporter 5 isoform 1 | 1.0 | 0.413 | 0.882 | 7e-67 | |
| 357462377 | 377 | Zinc transporter [Medicago truncatula] g | 1.0 | 0.384 | 0.841 | 4e-65 | |
| 357462373 | 440 | Zinc transporter [Medicago truncatula] g | 1.0 | 0.329 | 0.841 | 4e-65 | |
| 357462375 | 372 | Zinc transporter [Medicago truncatula] g | 1.0 | 0.389 | 0.841 | 4e-65 | |
| 255573599 | 355 | zinc/iron transporter, putative [Ricinus | 1.0 | 0.408 | 0.827 | 2e-64 | |
| 38036062 | 372 | metal transport protein [Medicago trunca | 1.0 | 0.389 | 0.827 | 1e-63 | |
| 224086353 | 343 | ZIP transporter [Populus trichocarpa] gi | 1.0 | 0.422 | 0.834 | 1e-63 | |
| 224086349 | 318 | ZIP transporter [Populus trichocarpa] gi | 1.0 | 0.455 | 0.820 | 2e-63 |
| >gi|296087548|emb|CBI34137.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 128/145 (88%), Positives = 137/145 (94%)
Query: 1 VLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAI 60
VLELGI+VHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCI QAKFK R AI
Sbjct: 15 VLELGIVVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCIVQAKFKLRAAAI 74
Query: 61 LALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMN 120
+ALFFSLTTPVGIAIGIGIS+VYDENS TALIVEGIFNAA+AGIL+YM+LVDLLAADFMN
Sbjct: 75 MALFFSLTTPVGIAIGIGISNVYDENSSTALIVEGIFNAASAGILVYMALVDLLAADFMN 134
Query: 121 PKMQTNKRLQFGANVSLLLGAGCMS 145
P+MQ N RLQ GAN+SLL+GAGCMS
Sbjct: 135 PRMQGNGRLQVGANISLLVGAGCMS 159
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147782968|emb|CAN74488.1| hypothetical protein VITISV_029272 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|225464748|ref|XP_002264621.1| PREDICTED: zinc transporter 5 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357462377|ref|XP_003601470.1| Zinc transporter [Medicago truncatula] gi|355490518|gb|AES71721.1| Zinc transporter [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357462373|ref|XP_003601468.1| Zinc transporter [Medicago truncatula] gi|355490516|gb|AES71719.1| Zinc transporter [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|357462375|ref|XP_003601469.1| Zinc transporter [Medicago truncatula] gi|355490517|gb|AES71720.1| Zinc transporter [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|255573599|ref|XP_002527722.1| zinc/iron transporter, putative [Ricinus communis] gi|223532863|gb|EEF34635.1| zinc/iron transporter, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|38036062|gb|AAR08414.1| metal transport protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224086353|ref|XP_002307860.1| ZIP transporter [Populus trichocarpa] gi|222853836|gb|EEE91383.1| ZIP transporter [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|224086349|ref|XP_002307858.1| ZIP transporter [Populus trichocarpa] gi|222853834|gb|EEE91381.1| ZIP transporter [Populus trichocarpa] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 145 | ||||||
| UNIPROTKB|A3BI11 | 390 | ZIP8 "Zinc transporter 8" [Ory | 1.0 | 0.371 | 0.689 | 5.2e-49 | |
| UNIPROTKB|Q6L8G0 | 353 | ZIP5 "Zinc transporter 5" [Ory | 1.0 | 0.410 | 0.668 | 3.3e-47 | |
| UNIPROTKB|Q6ZJ91 | 396 | ZIP4 "Zinc transporter 4" [Ory | 1.0 | 0.366 | 0.675 | 4.2e-47 | |
| TAIR|locus:2207140 | 360 | ZIP5 "zinc transporter 5 precu | 1.0 | 0.402 | 0.662 | 1.1e-46 | |
| UNIPROTKB|Q7XLD4 | 364 | ZIP3 "Zinc transporter 3" [Ory | 1.0 | 0.398 | 0.668 | 6.2e-46 | |
| TAIR|locus:2062576 | 339 | ZIP3 "zinc transporter 3 precu | 1.0 | 0.427 | 0.648 | 7.1e-45 | |
| TAIR|locus:2087705 | 355 | ZIP1 "zinc transporter 1 precu | 1.0 | 0.408 | 0.619 | 3.6e-41 | |
| UNIPROTKB|Q75HB1 | 374 | IRT1 "Fe(2+) transport protein | 1.0 | 0.387 | 0.6 | 5.9e-41 | |
| TAIR|locus:2174098 | 355 | ZIP12 "zinc transporter 12 pre | 1.0 | 0.408 | 0.579 | 5.9e-41 | |
| UNIPROTKB|Q6L8G1 | 370 | IRT2 "Fe(2+) transport protein | 1.0 | 0.391 | 0.593 | 9.6e-41 |
| UNIPROTKB|A3BI11 ZIP8 "Zinc transporter 8" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 100/145 (68%), Positives = 119/145 (82%)
Query: 1 VLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAI 60
VLELGI+VHSVIIGISLGAS++P+TIKPLV AL+FHQ FEGMGLGGCI QAKFK R +
Sbjct: 240 VLELGIVVHSVIIGISLGASQNPETIKPLVVALSFHQMFEGMGLGGCIVQAKFKVRSIVT 299
Query: 61 LALFFSLTTPVXXXXXXXXSSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMN 120
+ LFF LTTPV SSVY+E+SPTAL+VEGI N+ AAGILIYM+LVDLLA DFMN
Sbjct: 300 MVLFFCLTTPVGIAVGVGISSVYNESSPTALVVEGILNSVAAGILIYMALVDLLAEDFMN 359
Query: 121 PKMQTNKRLQFGANVSLLLGAGCMS 145
P++Q+ +LQ G N+++L GAG MS
Sbjct: 360 PRVQSKGKLQLGINLAMLAGAGLMS 384
|
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| UNIPROTKB|Q6L8G0 ZIP5 "Zinc transporter 5" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6ZJ91 ZIP4 "Zinc transporter 4" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2207140 ZIP5 "zinc transporter 5 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q7XLD4 ZIP3 "Zinc transporter 3" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2062576 ZIP3 "zinc transporter 3 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2087705 ZIP1 "zinc transporter 1 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q75HB1 IRT1 "Fe(2+) transport protein 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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| TAIR|locus:2174098 ZIP12 "zinc transporter 12 precursor" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q6L8G1 IRT2 "Fe(2+) transport protein 2" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 145 | |||
| TIGR00820 | 324 | TIGR00820, zip, ZIP zinc/iron transport family | 5e-76 | |
| PLN02159 | 337 | PLN02159, PLN02159, Fe(2+) transport protein | 1e-53 | |
| pfam02535 | 314 | pfam02535, Zip, ZIP Zinc transporter | 3e-39 | |
| COG0428 | 266 | COG0428, COG0428, Predicted divalent heavy-metal c | 8e-04 |
| >gnl|CDD|233141 TIGR00820, zip, ZIP zinc/iron transport family | Back alignment and domain information |
|---|
Score = 228 bits (583), Expect = 5e-76
Identities = 108/145 (74%), Positives = 132/145 (91%)
Query: 1 VLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAI 60
VLELGI+VHSV+IG+SLGAS+SP TIKPL+AAL+FHQFFEG+GLGGCI+QA+FK + V I
Sbjct: 174 VLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSVTI 233
Query: 61 LALFFSLTTPVGIAIGIGISSVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMN 120
+ FF++TTP+GIAIG+GISS YD++SPTALIVEG+ NAA+AGILIYM+LVDLLAADFM+
Sbjct: 234 MCTFFAVTTPLGIAIGMGISSSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMH 293
Query: 121 PKMQTNKRLQFGANVSLLLGAGCMS 145
PKMQ+N RLQ A ++LLLGAG MS
Sbjct: 294 PKMQSNLRLQIMAYIALLLGAGLMS 318
|
The Zinc (Zn2+)-Iron (Fe2+) Permease (ZIP) Family (TC 2.A.5)Members of the ZIP family consist of proteins with eight putative transmembrane spanners. They are derived from animals, plants and yeast. Theycomprise a diverse family, with several paralogues in any one organism (e.g., at least five in Caenorabditis elegans, at least five in Arabidopsis thaliana and two inSaccharomyces cervisiae. The two S. cerevisiae proteins, Zrt1 and Zrt2, both probably transport Zn2+ with high specificity, but Zrt1 transports Zn2+ with ten-fold higher affinitythan Zrt2. Some members of the ZIP family have been shown to transport Zn2+ while others transport Fe2+, and at least one transports a range of metal ions. The energy source fortransport has not been characterized, but these systems probably function as secondary carriers [Transport and binding proteins, Cations and iron carrying compounds]. Length = 324 |
| >gnl|CDD|177818 PLN02159, PLN02159, Fe(2+) transport protein | Back alignment and domain information |
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| >gnl|CDD|217089 pfam02535, Zip, ZIP Zinc transporter | Back alignment and domain information |
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| >gnl|CDD|223505 COG0428, COG0428, Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 145 | |||
| TIGR00820 | 324 | zip ZIP zinc/iron transport family. transport has | 100.0 | |
| KOG1558 | 327 | consensus Fe2+/Zn2+ regulated transporter [Inorgan | 100.0 | |
| PLN02159 | 337 | Fe(2+) transport protein | 100.0 | |
| PF02535 | 317 | Zip: ZIP Zinc transporter; InterPro: IPR003689 The | 99.97 | |
| PRK04201 | 265 | zinc transporter ZupT; Provisional | 99.95 | |
| COG0428 | 266 | Predicted divalent heavy-metal cations transporter | 99.9 | |
| KOG2693 | 453 | consensus Putative zinc transporter [Inorganic ion | 99.79 | |
| KOG3907 | 303 | consensus ZIP-like zinc transporter proteins [Intr | 99.62 | |
| KOG2694 | 361 | consensus Putative zinc transporter [Inorganic ion | 99.5 | |
| KOG2474 | 406 | consensus Zinc transporter and related ZIP domain- | 98.64 | |
| PRK04201 | 265 | zinc transporter ZupT; Provisional | 98.46 | |
| PF02535 | 317 | Zip: ZIP Zinc transporter; InterPro: IPR003689 The | 96.3 | |
| COG0428 | 266 | Predicted divalent heavy-metal cations transporter | 93.23 | |
| PRK11469 | 188 | hypothetical protein; Provisional | 90.48 | |
| PLN02159 | 337 | Fe(2+) transport protein | 88.95 | |
| KOG1558 | 327 | consensus Fe2+/Zn2+ regulated transporter [Inorgan | 86.57 | |
| TIGR00820 | 324 | zip ZIP zinc/iron transport family. transport has | 84.42 | |
| COG1971 | 190 | Predicted membrane protein [Function unknown] | 82.41 | |
| TIGR02840 | 206 | spore_YtaF putative sporulation protein YtaF. This | 81.93 |
| >TIGR00820 zip ZIP zinc/iron transport family | Back alignment and domain information |
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Probab=100.00 E-value=3.1e-34 Score=233.21 Aligned_cols=145 Identities=74% Similarity=1.193 Sum_probs=133.4
Q ss_pred CchhHHHHHHHHHHHHHhhccCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHh
Q 044821 1 VLELGILVHSVIIGISLGASESPKTIKPLVAALTFHQFFEGMGLGGCITQAKFKSRGVAILALFFSLTTPVGIAIGIGIS 80 (145)
Q Consensus 1 ~l~~~l~~Hs~~eGlalG~~~~~~~~~~~~~aI~lHk~~e~~~l~~~l~~~~~~~~~~~~~~~~~s~~~PlG~~iG~~i~ 80 (145)
+|.+|+++||++||+++|++.+.+..+.+++||.+||+||+++++.++.+++.++++.+.+.++|++++|+|+++|+++.
T Consensus 174 ~l~~gl~~Hs~~eGlalG~~~~~~~~~~l~~Ai~~Hk~~eg~alg~~l~~~~~~~~~~~~~~~~fsl~tPiG~~iG~~~~ 253 (324)
T TIGR00820 174 VLELGIIVHSVVIGLSLGASQSPDTIKPLIAALSFHQFFEGLGLGGCISQAEFKCKSVTIMCTFFAVTTPLGIAIGMGIS 253 (324)
T ss_pred HHHHHHHhcchhhhhhhhhccCcchHHHHHHHHHHHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 47899999999999999999887788999999999999999999999999999999999999999999999999999998
Q ss_pred hccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCccccchHHHHHHHHHHHHhhhhcC
Q 044821 81 SVYDENSPTALIVEGIFNAAAAGILIYMSLVDLLAADFMNPKMQTNKRLQFGANVSLLLGAGCMS 145 (145)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~a~aaG~flyv~~~eilp~~~~~~~~~~~~~~~~~~~~~~~~G~~~M~ 145 (145)
+.+++++++..+++++++++++|+|+||++.|++|+|+..++.+++.++++.+++++++|+++|+
T Consensus 254 ~~~~~~~~~~~~~~gil~~~aaG~flYv~~~Ell~~e~~~~~~~~~~~~~~~~~~~~~~G~~~Ma 318 (324)
T TIGR00820 254 SSYDDSSPTALIVEGVLNAASAGILIYMALVDLLAADFMHPKMQSNLRLQIMAYIALLLGAGLMS 318 (324)
T ss_pred cccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 76555566667899999999999999999999999999887766667788999999999999995
|
transport has not been characterized, but these systems probably function as secondary carriers. |
| >KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PLN02159 Fe(2+) transport protein | Back alignment and domain information |
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| >PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] | Back alignment and domain information |
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| >PRK04201 zinc transporter ZupT; Provisional | Back alignment and domain information |
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| >COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG2693 consensus Putative zinc transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG3907 consensus ZIP-like zinc transporter proteins [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
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| >KOG2694 consensus Putative zinc transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >KOG2474 consensus Zinc transporter and related ZIP domain-containing proteins [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PRK04201 zinc transporter ZupT; Provisional | Back alignment and domain information |
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| >PF02535 Zip: ZIP Zinc transporter; InterPro: IPR003689 These ZIP zinc transporter proteins define a family of metal ion transporters that are found in plants, protozoa, fungi, invertebrates, and vertebrates, making it now possible to address questions of metal ion accumulation and homeostasis in diverse organisms [] | Back alignment and domain information |
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| >COG0428 Predicted divalent heavy-metal cations transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >PRK11469 hypothetical protein; Provisional | Back alignment and domain information |
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| >PLN02159 Fe(2+) transport protein | Back alignment and domain information |
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| >KOG1558 consensus Fe2+/Zn2+ regulated transporter [Inorganic ion transport and metabolism] | Back alignment and domain information |
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| >TIGR00820 zip ZIP zinc/iron transport family | Back alignment and domain information |
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| >COG1971 Predicted membrane protein [Function unknown] | Back alignment and domain information |
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| >TIGR02840 spore_YtaF putative sporulation protein YtaF | Back alignment and domain information |
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00