Citrus Sinensis ID: 044883

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Protein Sequence
MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSSVESRNNTRESKSVNSSRKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPGPDDLNIDT
Secondary Structure (PSIPRED)
ccccEEEEEccccccHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccccHHHHHcccccccccccccccccccccccccHHHHHHHHEEccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEEEEccccccHHHHHHHcccccccHHHHHHHEEcHHHHHHHHHHccccHHHHHHHHHcccEEccHHHHHHHHHHcHHHHHHHHHHHHHHHHHcccHHHHHHHccccccHHHHccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccccc
Coil and Loop (DISEMBL)
MDDAAVLHYTYTKfsdltsrrdrcgckptkedvRRCFMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKLMMKGILTRiyapmiinqglresGIYASVIASANTMLSKDKILSSvesrnntresksvnssrkiggfgqsQATARRVLEFIddanytlaippesppgpddlnidt
Flexible Loop (DISEMBL)
MDDAAVLHYTytkfsdltsrrdrcgckptkedvrrcfMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKIlssvesrnntresksvnssrkiggfgqsqaTARRVLEFIDDANYtlaippesppgpddlnidt
Low Complexity Region (SEG)
MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSSVESRNNTRESKSVNSSRKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPGPDDLNIDT
Disordered region (IsUnstruct)
****AVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTM**************************************RRVLEFIDDANYTLA****************
Disordered Region (DISOPRED)
**DAAVLHYTYTKFSDLTSRR**CGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVI*********************************************RVLEFIDDA*********************
Disordered Region (DISEMBL)
MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILS***************************ATARRVLEFIDDANYTLAIPPESPPGPDDLNIDT
Disordered Region (DISPRO)
MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANT**********************************************D**NYTL*********PDD*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNWYREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSSVESRNNTRESKSVNSSRKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPGPDDLNIDT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
147855895	557	hypothetical protein VITISV_013037 [Viti	0.988	0.319	0.703	1e-67
225449919	521	PREDICTED: uncharacterized protein LOC10	0.988	0.341	0.703	1e-67
357509589	521	hypothetical protein MTR_7g090740 [Medic	0.994	0.343	0.692	2e-63
255578465	517	N-acetyltransferase, putative [Ricinus c	0.944	0.328	0.693	2e-62
357457239	529	SDL-1 protein [Medicago truncatula] gi|3	0.95	0.323	0.676	2e-62
224137774	511	predicted protein [Populus trichocarpa]	0.938	0.330	0.653	2e-60
356541512	538	PREDICTED: uncharacterized protein LOC10	0.966	0.323	0.631	8e-60
18307504	529	SDL-1 protein [Nicotiana plumbaginifolia	0.938	0.319	0.672	5e-59
133711813	537	sdl1-like protein [Solanum lycopersicum]	0.977	0.327	0.622	1e-57
449494718	535	PREDICTED: uncharacterized LOC101208298	0.972	0.327	0.674	3e-57

>gi|147855895|emb|CAN80751.1| hypothetical protein VITISV_013037 [Vitis vinifera]

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 126/179 (70%), Positives = 148/179 (82%), Gaps = 1/179 (0%)

Query: 1   MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
           +++AAVLHYTYTKFSDLTSRRDRCGCKPTKEDV+RCFMLEFDRAAFIIASTATE+EMLNW
Sbjct: 327 LEEAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLEFDRAAFIIASTATEEEMLNW 386

Query: 61  YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
           YREH+VW DK L  KL+ KGILTRIYAPM I QGLRESG+++SVIASA T LSKDK LS+
Sbjct: 387 YREHIVWTDKALNMKLLRKGILTRIYAPMAIIQGLRESGVFSSVIASAPTTLSKDKFLST 446

Query: 121 VESRNNTRESKSVN-SSRKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPGPDDLNI 178
           + S N++R   S +  SRK G   +SQATAR+ LE  D A++  A+PP SPPG DD ++
Sbjct: 447 IGSTNSSRAVASESLPSRKFGRSKESQATARKALEIADAASHKAAVPPLSPPGMDDEHL 505

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449919|ref|XP_002268366.1| PREDICTED: uncharacterized protein LOC100261913 [Vitis vinifera] gi|296081306|emb|CBI17750.3| unnamed protein product [Vitis vinifera]

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 126/179 (70%), Positives = 148/179 (82%), Gaps = 1/179 (0%)

Query: 1   MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
           +++AAVLHYTYTKFSDLTSRRDRCGCKPTKEDV+RCFMLEFDRAAFIIASTATE+EMLNW
Sbjct: 339 LEEAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVKRCFMLEFDRAAFIIASTATEEEMLNW 398

Query: 61  YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
           YREH+VW DK L  KL+ KGILTRIYAPM I QGLRESG+++SVIASA T LSKDK LS+
Sbjct: 399 YREHIVWTDKALNMKLLRKGILTRIYAPMAIIQGLRESGVFSSVIASAPTTLSKDKFLST 458

Query: 121 VESRNNTRESKSVN-SSRKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPGPDDLNI 178
           + S N++R   S +  SRK G   +SQATAR+ LE  D A++  A+PP SPPG DD ++
Sbjct: 459 IGSTNSSRAVASESLPSRKFGRSKESQATARKALEIADAASHKAAVPPLSPPGMDDEHL 517

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357509589|ref|XP_003625083.1| hypothetical protein MTR_7g090740 [Medicago truncatula] gi|87241462|gb|ABD33320.1| IMP dehydrogenase/GMP reductase, putative [Medicago truncatula] gi|355500098|gb|AES81301.1| hypothetical protein MTR_7g090740 [Medicago truncatula]

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/182 (69%), Positives = 146/182 (80%), Gaps = 3/182 (1%)

Query: 1   MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
           +++AAVLHYTYTKFSDLTSRRDRCGCKPTK+DV+RCFML+FDRAAFIIASTATE+EML W
Sbjct: 336 LEEAAVLHYTYTKFSDLTSRRDRCGCKPTKDDVKRCFMLDFDRAAFIIASTATEEEMLQW 395

Query: 61  YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIA-SANTMLSKDKILS 119
           YRE +VW DKTL  KLM KGILTRIYAPM I Q LRE+G++ SVIA +A T +SKD  L 
Sbjct: 396 YRERIVWTDKTLNMKLMRKGILTRIYAPMAIIQSLRETGVFNSVIAKAAQTTISKDNFLK 455

Query: 120 SVESRNNTRESKS-VNSSRKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPGPDDLNI 178
           SV+S N TR ++S + SSRKI   G SQA ARR+LE IDD+    AIPP SPP  DD + 
Sbjct: 456 SVDSSNATRNARSEMLSSRKIDAGGASQAIARRILEVIDDS-IPSAIPPLSPPYHDDADA 514

Query: 179 DT 180
           DT
Sbjct: 515 DT 516

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578465|ref|XP_002530097.1| N-acetyltransferase, putative [Ricinus communis] gi|223530408|gb|EEF32296.1| N-acetyltransferase, putative [Ricinus communis]

 Score =  243 bits (620), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/173 (69%), Positives = 144/173 (83%), Gaps = 3/173 (1%)

Query: 1   MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
           +D+AAVLHYTYTKF DLTSRRDRCGCKPTK+DV+RCFMLEFDRAAFIIASTATE+EML W
Sbjct: 339 LDEAAVLHYTYTKFFDLTSRRDRCGCKPTKDDVKRCFMLEFDRAAFIIASTATEEEMLRW 398

Query: 61  YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
           Y+E VVW DK L  KLM KGILTRIYAPM+I QGLRESG++++ IA A T L+  + LSS
Sbjct: 399 YQERVVWTDKELNLKLMRKGILTRIYAPMVIVQGLRESGVFSNAIAMAQTNLT--EFLSS 456

Query: 121 VESRNNTRESKS-VNSSRKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPG 172
           VE+ ++++ +KS V SSRKIG  G+SQATARRVL+   D +   A+PP+SPPG
Sbjct: 457 VENSDSSKTAKSGVISSRKIGQNGESQATARRVLQISGDISLPSAVPPQSPPG 509

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357457239|ref|XP_003598900.1| SDL-1 protein [Medicago truncatula] gi|355487948|gb|AES69151.1| SDL-1 protein [Medicago truncatula]

 Score =  243 bits (620), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/173 (67%), Positives = 142/173 (82%), Gaps = 2/173 (1%)

Query: 1   MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
           +++AAVLHYTY KFSDLTSRRDRCGCKPTKEDV+RCFMLEFDR+AFIIASTATE+EML W
Sbjct: 347 LEEAAVLHYTYAKFSDLTSRRDRCGCKPTKEDVKRCFMLEFDRSAFIIASTATEEEMLKW 406

Query: 61  YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
           Y EHVVW DK +K KL+ KGILTRIY PM+I Q LRESG+++SVIASA + LSK+K L S
Sbjct: 407 YNEHVVWGDKEVKIKLLRKGILTRIYTPMVIIQSLRESGVFSSVIASAPS-LSKEKFLHS 465

Query: 121 VESRNNTRESKSVN-SSRKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPG 172
           ++S N+TR   S++  SRK+G   +SQATAR+VL+        LA+PP+SPPG
Sbjct: 466 IDSSNSTRAIASLSLPSRKVGRTKESQATARKVLDLESSVFQELAVPPQSPPG 518

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224137774|ref|XP_002322648.1| predicted protein [Populus trichocarpa] gi|222867278|gb|EEF04409.1| predicted protein [Populus trichocarpa]

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 117/179 (65%), Positives = 143/179 (79%), Gaps = 10/179 (5%)

Query: 1   MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
           +++AAVLHYTY KFSDLTSRRDRCGCKPTKEDV+RCFMLEFDRAAFIIASTATE+EML+W
Sbjct: 342 LEEAAVLHYTYPKFSDLTSRRDRCGCKPTKEDVKRCFMLEFDRAAFIIASTATEEEMLHW 401

Query: 61  YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
           YRE +VW DK L  KL+ KGILTRIYAPM+I Q LRE+G++ SVIASA       K+LSS
Sbjct: 402 YRERIVWTDKALNLKLLRKGILTRIYAPMVIVQRLRETGVFTSVIASAQ------KVLSS 455

Query: 121 VESRNNTRESKSVNSSRKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPGPDDLNID 179
           V + +    +  V SS KIG  G+S+ATARRVL+  D+A+++ AIPP SPPG + L ++
Sbjct: 456 VTNSS----TAGVASSSKIGHDGESKATARRVLQIPDNASFSSAIPPLSPPGLEGLYME 510

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541512|ref|XP_003539219.1| PREDICTED: uncharacterized protein LOC100778124 [Glycine max]

 Score =  234 bits (598), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 113/179 (63%), Positives = 142/179 (79%), Gaps = 5/179 (2%)

Query: 1   MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
           +++AAVLHYTY KFSDLTSRRDRCGCKPTKEDV+RCFMLEFDR+AFIIASTATE+EM+ W
Sbjct: 354 LEEAAVLHYTYAKFSDLTSRRDRCGCKPTKEDVKRCFMLEFDRSAFIIASTATEEEMMKW 413

Query: 61  YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
           Y EHVVW DK LK KL+ KG+LTRIY+PM+I Q LRESG+++SVIASA + LSK+  L S
Sbjct: 414 YNEHVVWGDKDLKMKLLRKGVLTRIYSPMVIIQSLRESGVFSSVIASAPS-LSKENFLLS 472

Query: 121 VESRNNTRESKSV----NSSRKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPGPDD 175
           ++S N++R   SV    ++SRK+G   +SQA  R+ L     A + +A+PP SPPG D+
Sbjct: 473 IDSSNSSRAVASVTTLPSTSRKVGRTKESQAATRKALSIESVAFHQVAVPPLSPPGLDN 531

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18307504|emb|CAD21166.1| SDL-1 protein [Nicotiana plumbaginifolia]

 Score =  232 bits (591), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 119/177 (67%), Positives = 145/177 (81%), Gaps = 8/177 (4%)

Query: 1   MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
           +++AAVLHYTY+KFSDLTSRRDRCGCKPTKEDV+RCFMLEFDR+AFIIASTATEDEMLNW
Sbjct: 347 LEEAAVLHYTYSKFSDLTSRRDRCGCKPTKEDVKRCFMLEFDRSAFIIASTATEDEMLNW 406

Query: 61  YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
           YREHVVW DK +  KL+ KGILTRIYAPM+I QGLRESG+++S+++SA+  LSKDK L+S
Sbjct: 407 YREHVVWTDKAVNLKLLRKGILTRIYAPMVIVQGLRESGVFSSIVSSAHKSLSKDKFLAS 466

Query: 121 VESRNNTRESKSVN-SSRKIGGFGQSQATARRVLEFIDDAN----YTLAIPPESPPG 172
           +ES N+++ + S    SRKIG    SQAT RRVLE  + A+    +  A+PP  PPG
Sbjct: 467 IESSNSSKAAASETLPSRKIGRNQHSQAT-RRVLE--ESASHFEFHEEAVPPRPPPG 520

Source: Nicotiana plumbaginifolia

Species: Nicotiana plumbaginifolia

Genus: Nicotiana

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|133711813|gb|ABO36631.1| sdl1-like protein [Solanum lycopersicum]

 Score =  227 bits (579), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 112/180 (62%), Positives = 138/180 (76%), Gaps = 4/180 (2%)

Query: 1   MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
           + +AAVLHYTY KFSDLTSRRDRCGCKPTKEDV+RCFMLEFDRAAFIIAST TE+EML+W
Sbjct: 348 LGEAAVLHYTYPKFSDLTSRRDRCGCKPTKEDVKRCFMLEFDRAAFIIASTLTEEEMLDW 407

Query: 61  YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
           YREHVVW DKTL +KL+ KGILTRIY PM I QGL+ESG++ S+IASA+  + KD+ LSS
Sbjct: 408 YREHVVWTDKTLIQKLIKKGILTRIYTPMAIVQGLKESGVFVSIIASAHRDVIKDESLSS 467

Query: 121 VESRNNTRESKSVNSS--RKIGGFGQSQATARRVLEFIDDANYTLAIPPESPPGPDDLNI 178
                N      +  +  RK+G   +SQ+TAR+ ++F    +   AIPPESPPG D +++
Sbjct: 468 SAGNRNASGYPHITDTFPRKMGRILESQSTARKFVDFSTTDHQ--AIPPESPPGMDGIDL 525

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449494718|ref|XP_004159627.1| PREDICTED: uncharacterized LOC101208298 [Cucumis sativus]

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 120/178 (67%), Positives = 144/178 (80%), Gaps = 3/178 (1%)

Query: 1   MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
           +D+AAVLHYTY KF+DLTSRRDRCGCKPTK+DV+RCFMLEFDRAAFIIASTATE+EML W
Sbjct: 350 LDEAAVLHYTYPKFTDLTSRRDRCGCKPTKDDVKRCFMLEFDRAAFIIASTATEEEMLRW 409

Query: 61  YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASA-NTMLSKDKILS 119
           YRE +VW DK L  KL+ KGILTRIYAPM+I QGLR SGI++SVI+SA    L+KD+ LS
Sbjct: 410 YRERIVWTDKALNLKLLRKGILTRIYAPMVIIQGLRNSGIFSSVISSAVQNTLAKDQFLS 469

Query: 120 SVESRNNTRESKSVN-SSRKIG-GFGQSQATARRVLEFIDDANYTLAIPPESPPGPDD 175
           SVES N++R  +S   SSRK+G   G  QATAR++LE +D+ +   AIPP SPP  D+
Sbjct: 470 SVESSNSSRRIESGGLSSRKVGINSGDFQATARKILEIVDNLSDLSAIPPLSPPSLDE 527

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	180
TAIR|locus:2077858	533	KOB1 "KOBITO" [Arabidopsis tha	0.95	0.320	0.591	5.6e-52
TAIR|locus:2082573	514	AT3G57200 "AT3G57200" [Arabido	0.872	0.305	0.596	6e-48
TAIR|locus:4515102980	451	AT2G41451 [Arabidopsis thalian	0.683	0.272	0.699	3.9e-44

TAIR|locus:2077858 KOB1 "KOBITO" [Arabidopsis thaliana (taxid:3702)]

 Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
 Identities = 107/181 (59%), Positives = 139/181 (76%)

Query:     1 MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
             +++AAVLHYTY+KFSDLTSRRDRCGCKPTKEDV+RCFML+FDR+AFIIASTAT++EML+W
Sbjct:   360 LEEAAVLHYTYSKFSDLTSRRDRCGCKPTKEDVKRCFMLDFDRSAFIIASTATDEEMLSW 419

Query:    61 YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
             YREHVVW DK +K KL+ KGILTRIY+PM++ Q L+ESG+++SV++SA+T LSK K LSS
Sbjct:   420 YREHVVWGDKDVKTKLLRKGILTRIYSPMVVIQALKESGVFSSVVSSASTNLSKKKFLSS 479

Query:   121 VESRNNTRESKSVNSSRKIGGFGQSQA-TARRVLEFIDDANYTLAIPPESPPGPDDLNID 179
             +   N++R + S +   K     +S+  +AR +LE         AIPP SPPG +     
Sbjct:   480 IHKSNSSRSTASESLPSKES---KSEGISARHLLEAES------AIPPLSPPGMEQARFF 530

Query:   180 T 180
             T
Sbjct:   531 T 531

GO:0009507 "chloroplast" evidence=ISM

GO:0009826 "unidimensional cell growth" evidence=IMP

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009831 "plant-type cell wall modification involved in multidimensional cell growth" evidence=IMP

GO:0030244 "cellulose biosynthetic process" evidence=RCA;IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IMP

GO:0009749 "response to glucose stimulus" evidence=RCA;IMP

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009663 "plasmodesma organization" evidence=IMP

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0009744 "response to sucrose stimulus" evidence=RCA

GO:0009750 "response to fructose stimulus" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:2082573 AT3G57200 "AT3G57200" [Arabidopsis thaliana (taxid:3702)]

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 105/176 (59%), Positives = 132/176 (75%)

Query:     1 MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
             +++AAVLHYTY +FSDLTSRRDRCGCKPTK DV+RCFMLEFDRAAFIIASTA+ +EML W
Sbjct:   346 LEEAAVLHYTYPRFSDLTSRRDRCGCKPTKVDVKRCFMLEFDRAAFIIASTASSEEMLQW 405

Query:    61 YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
             YREHVVW D+ LK KL+ KGILTRIYAPM+I Q LRE+G+++SV+ +A+   SK+   S+
Sbjct:   406 YREHVVWTDEKLKLKLLRKGILTRIYAPMVIIQELREAGVFSSVVIAAHKSPSKNS--ST 463

Query:   121 VESRNN-TRESKSVNSSRKIGGFGQSQATARRVLEF---IDDANYTLAIPPESPPG 172
              +S +  TRES     S++ G         RRVLEF   +D  +   A+PP+SPPG
Sbjct:   464 ADSTSGITRES-----SQETG--------KRRVLEFHLDVDGESQASAVPPQSPPG 506

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

TAIR|locus:4515102980 AT2G41451 [Arabidopsis thaliana (taxid:3702)]

 Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
 Identities = 86/123 (69%), Positives = 105/123 (85%)

Query:     1 MDDAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRAAFIIASTATEDEMLNW 60
             +D+AA+LHYTY+KFSDLTSRRDRCGCKPTK+DV+RCFML+FDRAAFIIAST+T +EML W
Sbjct:   327 LDEAAILHYTYSKFSDLTSRRDRCGCKPTKKDVKRCFMLDFDRAAFIIASTSTSEEMLQW 386

Query:    61 YREHVVWADKTLKKKLMMKGILTRIYAPMIINQGLRESGIYASVIASANTMLSKDKILSS 120
             YRE VVW D  L  KL+ KGILTRIYAPM+I Q LRE+G+++SV+ SA+  LSK++  SS
Sbjct:   387 YRERVVWTDDNLILKLLRKGILTRIYAPMVIIQELREAGVFSSVVTSAHMSLSKNRSNSS 446

Query:   121 VES 123
               S
Sbjct:   447 TSS 449


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.381    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      180       180   0.00092  109 3  11 22  0.42    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  593 (63 KB)
  Total size of DFA:  151 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.75u 0.11s 17.86t   Elapsed:  00:00:01
  Total cpu time:  17.75u 0.11s 17.86t   Elapsed:  00:00:01
  Start:  Fri May 10 15:31:06 2013   End:  Fri May 10 15:31:07 2013

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	180
KOG1294	335	consensus Apurinic/apyrimidinic endonuclease and r	83.3

>KOG1294 consensus Apurinic/apyrimidinic endonuclease and related enzymes [Replication, recombination and repair]

Probab=83.30  E-value=0.23  Score=44.71  Aligned_cols=42  Identities=24%  Similarity=0.221  Sum_probs=39.6

Q ss_pred             cceeeeeecccccccccccccCCCCCChhhhhhhhhhhhhhh
Q 044883            3 DAAVLHYTYTKFSDLTSRRDRCGCKPTKEDVRRCFMLEFDRA   44 (180)
Q Consensus         3 EaAVLHytY~kfsdltsRrdRCgCKPTkeDVkrCfmL~FDR~   44 (180)
                      .+.||||++-++.+..+|...|-|++-.++++-|++.++|+.
T Consensus        44 ~~~~l~~r~~~~~~~g~~~~~~i~~~~i~~~~~~~~~~~~~~   85 (335)
T KOG1294|consen   44 FAKVLHYRVEKLLKQGNRKVLNICPWDIAGLEACEKFSGDPE   85 (335)
T ss_pred             hhhHHHHHHHHHHHhCCeeEeecCchhhhhhhhhhccccchh
Confidence            578999999999999999999999999999999999997776

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00