Citrus Sinensis ID: 044951

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-----
Protein Sequence
MSNFKLDVVIHGDSEEAAASSPNRKVTVSETRNIQNQGYTGLTDRLFRGSRAAVGGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS
Secondary Structure (PSIPRED)
cccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccEEEEccccccccccccccccEHHHHHHcccHHHccHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccEcccccHHHHHHHccHHHHHHHHHHHcHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHEccccHHHHHHHHHHHcHHEEHHHHEccccccHHHHHHHHHHHHHHHHHEEEEcc
Coil and Loop (DISEMBL)
MSNFKLDVVIhgdseeaaasspnrkvtvsetrniqnqgytgltdrlfrgsraavggnfklpvegdekrehgpavksgplisgtAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSgsitdlsfdtkGYAWQIVNCILTASYSLTLRRVMDKAkqatrsgslNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWflqqtgpttyslVGSLNKIPISLAGLVlfnvplsvpnMFSILFGLFAGIFFARAKMS
Flexible Loop (DISEMBL)
msnfkldvvihgdseeaaasspnrkvtvsetrniqnqgytgltdrlfrgsRAAVGGnfklpvegdekrehgpavksgpliSGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKqatrsgslneVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS
Low Complexity Region (SEG)
MSNFKLDVVIHGDSEEAAASSPNRKVTVSETRNIQNQGYTGLTDRLFRGSRAAVGGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLvvavfgffgavSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGslnevsmvllnnllslPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS
Disordered region (IsUnstruct)
*************************************GYTGLTDRLFRGSRAAVGGNF*******************PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVMDKA*******SLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR****
Disordered Region (DISOPRED)
******D************************************************************************ISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS
Disordered Region (DISEMBL)
MSNFKLDVVIHGDS**************SETRNIQNQGYTGLTDRLFRGSRAAVGGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVM*********GSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS
Disordered Region (DISPRO)
**NFKLDVVIHGDSEEAAASSPNRKVTVSETRNIQNQGYTGLTDRLFRGSR************************SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSNFKLDVVIHGDSEEAAASSPNRKVTVSETRNIQNQGYTGLTDRLFRGSRAAVGGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	375	2.2.26 [Sep-21-2011]
Q84L09	375	GDP-mannose transporter G	yes	no	0.984	0.984	0.677	1e-149
Q941R4	333	GDP-mannose transporter G	no	no	0.842	0.948	0.618	1e-109
Q4WTQ6	382	GDP-mannose transporter O	yes	no	0.869	0.853	0.297	6e-40
B0Y384	382	GDP-mannose transporter O	N/A	no	0.869	0.853	0.297	6e-40
A1CZJ3	382	GDP-mannose transporter 1	N/A	no	0.869	0.853	0.297	7e-40
A1C9R4	381	GDP-mannose transporter O	N/A	no	0.874	0.860	0.293	1e-39
Q2UTL1	381	GDP-mannose transporter O	yes	no	0.874	0.860	0.294	2e-39
C8Z742	341	Probable GDP-mannose tran	N/A	no	0.8	0.879	0.313	6e-37
Q0CA27	384	GDP-mannose transporter O	N/A	no	0.792	0.773	0.304	1e-36
A2R9P4	381	GDP-mannose transporter O	yes	no	0.784	0.771	0.298	3e-36

>sp|Q84L09|GONS2_ARATH GDP-mannose transporter GONST2 OS=Arabidopsis thaliana GN=GONST2 PE=2 SV=1

 Score =  527 bits (1358), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/381 (67%), Positives = 306/381 (80%), Gaps = 12/381 (3%)

Query: 1   MSNFKLDVVIHGDSEEAAAS------SPNRKVTVSETRNIQNQGYTGLTDRLFRGSRAAV 54
           MS  KL+ ++  + +E+  S      S  +   V +  + ++  +   ++R  R  R   
Sbjct: 1   MSAVKLEAIVCHEPDESELSHLSDNGSKTKNGVVFQLLDQKSSEHRWFSERFLRWRRR-- 58

Query: 55  GGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFY 114
                LPV+GD +R+HG   +SGPL+SG AYCISSCSM +LNK+VLS+YNFNAG+SLM Y
Sbjct: 59  ----YLPVDGDNRRDHGSVKQSGPLVSGAAYCISSCSMIILNKIVLSSYNFNAGVSLMLY 114

Query: 115 QNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL 174
           QNLIS LVVAV    G VSVEK NWKLI++W+PVN+IF+GMLVSGMYSLKYIN+AMVTIL
Sbjct: 115 QNLISCLVVAVLDISGVVSVEKFNWKLIRVWMPVNVIFVGMLVSGMYSLKYINVAMVTIL 174

Query: 175 KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILT 234
           KN TNILT +GE+YMFRKRQN KVW AMF+MIISA+SG ITDL+FD  GY WQ+ NC LT
Sbjct: 175 KNATNILTGIGEVYMFRKRQNNKVWAAMFMMIISAISGGITDLTFDAVGYTWQLANCFLT 234

Query: 235 ASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIE 294
           ASYSLTLRRVMDKAKQ+T+SGSLNEVSMVLLNNLLS+PF + LI++  EWRYV++T V +
Sbjct: 235 ASYSLTLRRVMDKAKQSTKSGSLNEVSMVLLNNLLSIPFGIILIILLGEWRYVISTDVTK 294

Query: 295 LPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVP 354
             MFWV ATASGFLGLAISFTSMWFL QTGPTTYSLVGSLNK+PISLAGLVLFNVPLS+P
Sbjct: 295 DSMFWVVATASGFLGLAISFTSMWFLHQTGPTTYSLVGSLNKVPISLAGLVLFNVPLSLP 354

Query: 355 NMFSILFGLFAGIFFARAKMS 375
           N+FSILFGLFAG+ FARAKMS
Sbjct: 355 NLFSILFGLFAGVVFARAKMS 375

GDP-mannose transporter that may be involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.
Arabidopsis thaliana (taxid: 3702)

>sp|Q941R4|GONS1_ARATH GDP-mannose transporter GONST1 OS=Arabidopsis thaliana GN=GONST1 PE=1 SV=2

 Score =  393 bits (1010), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 203/328 (61%), Positives = 245/328 (74%), Gaps = 12/328 (3%)

Query: 59  KLPVEGDEKREHGPAVKSG------------PLISGTAYCISSCSMTLLNKVVLSTYNFN 106
           KL        E G  VKSG             L+SG AYCISSCSM L+NK VLS+YNFN
Sbjct: 2   KLYEHDGVDLEDGKTVKSGGDKPIPRKIHNRALLSGLAYCISSCSMILVNKFVLSSYNFN 61

Query: 107 AGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYI 166
           AGI LM YQN +S ++V      G ++ E L  +L+K+W PVN+IF+GML++ M+SLKYI
Sbjct: 62  AGIFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVIFVGMLITSMFSLKYI 121

Query: 167 NIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAW 226
           N+AMVT+LKN+TN++TAVGE+Y+F K+ + +VW A+FLMIISAVSG ITDLSF+  GYAW
Sbjct: 122 NVAMVTVLKNVTNVITAVGEMYLFNKQHDNRVWAALFLMIISAVSGGITDLSFNAVGYAW 181

Query: 227 QIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRY 286
           QI NC LTASYSLTLR+ MD AKQ T+SG+LNE SMVLLNN LSLP  + L   F+E  Y
Sbjct: 182 QIANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNNTLSLPLGLLLSYFFNEMDY 241

Query: 287 VMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVL 346
           +  T ++ LP FW+  T SG LGLAISFTSMWFL QTG TTYSLVGSLNKIP+S+AG+VL
Sbjct: 242 LYQTPLLRLPSFWMVMTLSGLLGLAISFTSMWFLHQTGATTYSLVGSLNKIPLSIAGIVL 301

Query: 347 FNVPLSVPNMFSILFGLFAGIFFARAKM 374
           FNVP S+ N  SILFGL AG+ FARAKM
Sbjct: 302 FNVPTSLQNSASILFGLVAGVVFARAKM 329

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen. Required for the luminal synthesis of a variety of plant cell surface components.

Arabidopsis thaliana (taxid: 3702)

>sp|Q4WTQ6|GMT_ASPFU GDP-mannose transporter OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=gmt1 PE=3 SV=1

 Score =  165 bits (417), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 183/360 (50%), Gaps = 34/360 (9%)

Query: 35  QNQGYTGLTDRLFRGSRAAVGGNFKLPVEGDEKREHGPAVK---SGPLISGTAYCISSCS 91
           +   YT   D+L  G++     +F+ P      R  GP V    + P++   AYC SS  
Sbjct: 6   KTNEYTIEMDKLDHGNK-----DFEAPAPA--VRPRGPPVAQLANNPILPVLAYCGSSIL 58

Query: 92  MTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLI 151
           MT++NK VLS  +FN    L+  Q+++  + +        ++    N    K W P+ L+
Sbjct: 59  MTVMNKYVLSGRDFNLNFFLLCVQSIVCIVAIQTCKVSKLITYRDFNSDEAKKWFPITLL 118

Query: 152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVS 211
            IGM+ +G  +L+Y++I + TI KN+T IL A GE+  F          +  LM++S++ 
Sbjct: 119 LIGMIYTGSKALQYLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 178

Query: 212 GSITDLSFDTK--------------GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSL 257
            +  D+    +              GY W ++NC+ T+SY L +R+ +       +  + 
Sbjct: 179 AAWADIKHAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTNF 231

Query: 258 NEVSMVLLNNLLSLPFAMFLILIFDEW---RYVMNTGVIELPMFWVAATASGFLGLAISF 314
            +   +  NNLLS+P  + L  + ++W       N    +      A   SG   + IS+
Sbjct: 232 KDFDTMFYNNLLSIPVLLVLTFLMEDWSSANIARNFPSTDRNGILFAMILSGLSSVFISY 291

Query: 315 TSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374
           TS W ++ T  TTYS+VG+LNK+PI+L+GL+ F+ P++ P++ +I+ G  +GI +A AK+
Sbjct: 292 TSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIVVGFISGIVYAVAKI 351

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) (taxid: 330879)

>sp|B0Y384|GMT_ASPFC GDP-mannose transporter OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=gmt1 PE=3 SV=1

 Score =  165 bits (417), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 183/360 (50%), Gaps = 34/360 (9%)

Query: 35  QNQGYTGLTDRLFRGSRAAVGGNFKLPVEGDEKREHGPAVK---SGPLISGTAYCISSCS 91
           +   YT   D+L  G++     +F+ P      R  GP V    + P++   AYC SS  
Sbjct: 6   KTNEYTIEMDKLDHGNK-----DFEAPAPA--VRPRGPPVAQLANNPILPVLAYCGSSIL 58

Query: 92  MTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLI 151
           MT++NK VLS  +FN    L+  Q+++  + +        ++    N    K W P+ L+
Sbjct: 59  MTVMNKYVLSGRDFNLNFFLLCVQSIVCIVAIQTCKVSKLITYRDFNSDEAKKWFPITLL 118

Query: 152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVS 211
            IGM+ +G  +L+Y++I + TI KN+T IL A GE+  F          +  LM++S++ 
Sbjct: 119 LIGMIYTGSKALQYLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSII 178

Query: 212 GSITDLSFDTK--------------GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSL 257
            +  D+    +              GY W ++NC+ T+SY L +R+ +       +  + 
Sbjct: 179 AAWADIKHAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTNF 231

Query: 258 NEVSMVLLNNLLSLPFAMFLILIFDEW---RYVMNTGVIELPMFWVAATASGFLGLAISF 314
            +   +  NNLLS+P  + L  + ++W       N    +      A   SG   + IS+
Sbjct: 232 KDFDTMFYNNLLSIPVLLVLTFLMEDWSSANIARNFPSTDRNGILFAMILSGLSSVFISY 291

Query: 315 TSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374
           TS W ++ T  TTYS+VG+LNK+PI+L+GL+ F+ P++ P++ +I+ G  +GI +A AK+
Sbjct: 292 TSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIVVGFISGIVYAVAKI 351

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) (taxid: 451804)

>sp|A1CZJ3|GMT1_NEOFI GDP-mannose transporter 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=gmt1 PE=3 SV=1

 Score =  165 bits (417), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 183/360 (50%), Gaps = 34/360 (9%)

Query: 35  QNQGYTGLTDRLFRGSRAAVGGNFKLPVEGDEKREHGPA---VKSGPLISGTAYCISSCS 91
           +   YT   D+L  G++     NF+ P      R  GP    + + P++   AYC SS  
Sbjct: 6   KTNEYTVEMDKLDHGNK-----NFEAPAPA--VRPRGPPAAQLANNPILPVLAYCGSSIL 58

Query: 92  MTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLI 151
           MT++NK VLS  +FN    L+  Q+++  + +        ++    N    K W P+ L+
Sbjct: 59  MTVMNKYVLSGTDFNLNFFLLCVQSIVCIVAIQTCKSSKLITYRDFNSDEAKKWFPITLL 118

Query: 152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVS 211
            IGM+ +G  +L+Y++I + TI KN+T IL A GE+  F          +  LM++S++ 
Sbjct: 119 LIGMIYTGSKALQYLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGMTLFSFGLMVLSSII 178

Query: 212 GSITDLSFDTK--------------GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSL 257
            +  D+    +              GY W ++NC+ T+SY L +R+ +       +  + 
Sbjct: 179 AAWADIKHAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTNF 231

Query: 258 NEVSMVLLNNLLSLPFAMFLILIFDEW---RYVMNTGVIELPMFWVAATASGFLGLAISF 314
            +   +  NNLLS+P  + L  + ++W       N    +      A   SG   + IS+
Sbjct: 232 KDFDTMFYNNLLSIPVLLVLTFLMEDWSSANIARNFPPADRNGILFAMILSGLSSVFISY 291

Query: 315 TSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374
           TS W ++ T  TTYS+VG+LNK+PI+L+GL+ F+ P++ P++ +I+ G  +GI +A AK+
Sbjct: 292 TSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIVVGFISGIVYAVAKI 351

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) (taxid: 331117)

>sp|A1C9R4|GMT_ASPCL GDP-mannose transporter OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=gmt1 PE=3 SV=1

 Score =  164 bits (415), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 185/358 (51%), Gaps = 30/358 (8%)

Query: 35  QNQGYTGLTDRLFRGSRAAVGGNFKLPVEGDEKREHGPA-VKSGPLISGTAYCISSCSMT 93
           +   YT   D+L +GS+     NF+ P+   + R    A + + P++   AYC SS  MT
Sbjct: 6   KTNDYTVEMDKLDQGSK-----NFEAPLPPVQPRSAPNAQLANNPILPVLAYCGSSIMMT 60

Query: 94  LLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFI 153
           ++NK VLS  +FN    L+  Q+++  + +        ++    N    K W P+ L+ I
Sbjct: 61  VMNKYVLSGTDFNLNFLLLCVQSIVCIVAIQTCKASKLITYRDFNADEAKKWFPITLLLI 120

Query: 154 GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGS 213
           GM+ +G  +L++++I + TI KN+T IL A GE+  F          +  LM++S++  +
Sbjct: 121 GMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSIIAA 180

Query: 214 ITDLSFDTK--------------GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNE 259
             D+    +              GY W ++NC+ T+SY L +R+ +       +  +  +
Sbjct: 181 WADIKHAVESSGDATAKVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTNFKD 233

Query: 260 VSMVLLNNLLSLPFAMFLILIFDEW---RYVMNTGVIELPMFWVAATASGFLGLAISFTS 316
              +  NNLLS+P  + L  + ++W       N    +      A   SG   + IS+TS
Sbjct: 234 FDTMFYNNLLSIPVLLVLTFLMEDWSSANITRNFPPADRNGIMFAMILSGLSSVFISYTS 293

Query: 317 MWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374
            W ++ T  TTYS+VG+LNK+PI+++GL+ F+ P++ P++ +I+ G  +GI +A AK+
Sbjct: 294 AWCVRVTSSTTYSMVGALNKLPIAVSGLIFFDAPVTFPSVSAIVVGFVSGIVYAVAKI 351

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) (taxid: 344612)

>sp|Q2UTL1|GMT_ASPOR GDP-mannose transporter OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=gmt1 PE=3 SV=2

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 184/357 (51%), Gaps = 29/357 (8%)

Query: 35  QNQGYTGLTDRLFRGSRAAVGGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTL 94
           +   Y    D++ +GS+     NF+       +     ++   P++   AYC SS  MT+
Sbjct: 6   KTDDYAIEMDKIDQGSK-----NFEAAAPPQPRSVPSSSLSGNPVLPVLAYCGSSILMTV 60

Query: 95  LNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIG 154
           +NK VLS  +FN    L+  Q+++  + +    F G ++    +    K W P++L+ IG
Sbjct: 61  MNKYVLSGLDFNLNFFLLCVQSIVCIIAIQTCKFCGLITYRDFSADEAKKWFPISLLLIG 120

Query: 155 MLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI 214
           M+ +G  +L++++I + TI KN+T IL A GE+  F          +  LM++S++  + 
Sbjct: 121 MIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTGLTLFSFGLMVLSSIIAAW 180

Query: 215 TDL------SFDTK--------GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEV 260
            D+      S DT         GY W ++NC+ T+SY L +R+ +       +  +  + 
Sbjct: 181 ADIKHAVESSGDTSAQVSTLNAGYIWMLINCLCTSSYVLGMRKRI-------KLTNFKDF 233

Query: 261 SMVLLNNLLSLPFAMFLILIFDEWRYV---MNTGVIELPMFWVAATASGFLGLAISFTSM 317
             +  NNLLS+P  + L  + ++W       N    +      A   SG   + IS+TS 
Sbjct: 234 DTMFYNNLLSIPVLVVLTGLMEDWSSANIDRNFPQADRSSIMFAMILSGLSSVFISYTSA 293

Query: 318 WFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374
           W ++ T  TTYS+VG+LNK+PI+L+GL+ F+ P++ P++ +I  G  +GI +A AK+
Sbjct: 294 WCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIAVGFVSGIVYAIAKI 350

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Aspergillus oryzae (strain ATCC 42149 / RIB 40) (taxid: 510516)

>sp|C8Z742|GMT2_YEAS8 Probable GDP-mannose transporter 2 OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=HVG1 PE=3 SV=1

 Score =  155 bits (391), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 168/332 (50%), Gaps = 32/332 (9%)

Query: 64  GDEKREHGPAV-KSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLV 122
              K E   +V  SGP  S  +YC SS  MT+ NK V++  NFN    ++F Q+L+ T+ 
Sbjct: 2   SKHKHEWTESVANSGP-ASILSYCASSILMTVTNKFVVNLDNFNMNFVMLFVQSLVCTVT 60

Query: 123 VAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILT 182
           + +    G  +   LN   +K W P++L+ + M+ + + SL+Y+ + + TI KN+T IL 
Sbjct: 61  LCILRIVGVANFRSLNRTDVKNWFPISLLLVLMIYTSLKSLQYLAVPIYTIFKNLTIILI 120

Query: 183 AVGELYMFRKRQNQKVWTAMFLMIISAV-------------SGSITDLSFD--------- 220
           A GE+  F  +      T+  +M++S+V             + S+ DL  +         
Sbjct: 121 AYGEVLFFGGKVTSMELTSFIMMVLSSVVATWGDQQAIAIKASSLEDLDQELVESTIFVL 180

Query: 221 TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILI 280
             GY W   NCI +A + L +R+ +       R  +  +   +  NN+L+LP  +    I
Sbjct: 181 NPGYLWMFTNCISSALFVLIMRKRI-------RLTNFKDYDTMFYNNVLALPLLLVFSFI 233

Query: 281 FDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPIS 340
            ++W    N  V        A   SG + + IS+ S W ++ T  TTYS+VG+LNK+PI+
Sbjct: 234 MEDWS-TKNLSVNLSADSLAAMVISGLMSVGISYCSGWCVRVTSSTTYSMVGALNKLPIA 292

Query: 341 LAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372
           LAGLV F+ P +  + FSI  G  +G+ +A A
Sbjct: 293 LAGLVFFDAPKNFLSFFSIFLGFLSGLLYAVA 324

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) (taxid: 643680)

>sp|Q0CA27|GMT_ASPTN GDP-mannose transporter OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=gmt1 PE=3 SV=1

 Score =  154 bits (388), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/319 (30%), Positives = 171/319 (53%), Gaps = 22/319 (6%)

Query: 73  AVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAV 132
           ++ + P++   AYC SS  MT++NK VLS  +FN    L+  Q+++  + +      G +
Sbjct: 40  SISNNPILPVLAYCGSSILMTVMNKYVLSGLDFNLNFFLLCVQSIVCIVAIQTCKSCGLI 99

Query: 133 SVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRK 192
           +    +    + W P+ L+ IGM+ +G  +L++++I + TI KN+T IL A GE+  F  
Sbjct: 100 TYRDFSADEARKWFPITLLLIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGG 159

Query: 193 RQNQKVWTAMFLMIISAVSGSITDLSFDTK--------------GYAWQIVNCILTASYS 238
                   +  LM++S++  +  D+    +              GY W +VNC+ T+SY 
Sbjct: 160 SVTGLTLFSFGLMVLSSIIAAWADIKHAVESTGDATAKVSTLNAGYIWMLVNCLCTSSYV 219

Query: 239 LTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEW---RYVMNTGVIEL 295
           L +R+ +    + T     + ++M   NNLLS+P  + L  + ++W       N    + 
Sbjct: 220 LGMRKRI----KLTNFKDFDTLAM-FYNNLLSIPVLIVLTGLMEDWSSANITRNFPPADR 274

Query: 296 PMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPN 355
                A   SG   + IS+TS W ++ T  TTYS+VG+LNK+PI+L+GL+ F+ P++ P+
Sbjct: 275 NNIIFAMILSGLSSVFISYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPS 334

Query: 356 MFSILFGLFAGIFFARAKM 374
           + +I+ G  +GI +A AK+
Sbjct: 335 VSAIVVGFVSGIVYAVAKI 353

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663)

>sp|A2R9P4|GMT_ASPNC GDP-mannose transporter OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=gmt1 PE=3 SV=1

 Score =  153 bits (386), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/318 (29%), Positives = 168/318 (52%), Gaps = 24/318 (7%)

Query: 74  VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVS 133
           + + P++   AYC SS  MT++NK VLS  +FN    L+  Q+L+  + +      G ++
Sbjct: 40  LSNNPILPVLAYCGSSILMTVMNKYVLSGTDFNLNFFLLCIQSLVCIIAIQTCKSCGLIT 99

Query: 134 VEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKR 193
               +    + W P+ L+ IGM+ +G  +L++++I + TI KN+T IL A GE+  F   
Sbjct: 100 YRDFSADEARKWFPITLLLIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGS 159

Query: 194 QNQKVWTAMFLMIISAVSGSITDLSFDTK--------------GYAWQIVNCILTASYSL 239
                  +  LM++S++  +  D+    +              GY W +VNC+ T+SY L
Sbjct: 160 VTGLTLFSFGLMVLSSIIAAWADIKHAVESNGDATAKVSTLNAGYIWMLVNCLCTSSYVL 219

Query: 240 TLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYV---MNTGVIELP 296
            +R+ +       +  +  +   +  NNLLS+P  + L    ++W       N   ++  
Sbjct: 220 GMRKRI-------KLTNFKDFDTMFYNNLLSIPVLIVLSAFLEDWSSTNVNRNFPPMDRN 272

Query: 297 MFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNM 356
               A   SG   + IS+TS W ++ T  TTYS+VG+LNK+PI+++GL+ F+ P++ P++
Sbjct: 273 SIVFAMILSGLSSVFISYTSAWCVRVTSSTTYSMVGALNKLPIAISGLIFFDAPVTFPSV 332

Query: 357 FSILFGLFAGIFFARAKM 374
            +I+ G  +GI +A AK+
Sbjct: 333 SAIVVGFVSGIVYAVAKI 350

Involved in the import of GDP-mannose from the cytoplasm into the Golgi lumen.

Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
449518507	413	PREDICTED: LOW QUALITY PROTEIN: GDP-mann	0.976	0.886	0.695	1e-151
359478564	398	PREDICTED: GDP-mannose transporter GONST	0.994	0.937	0.690	1e-149
224106291	316	predicted protein [Populus trichocarpa]	0.842	1.0	0.816	1e-149
240254028	375	golgi nucleotide sugar transporter 2 [Ar	0.984	0.984	0.677	1e-147
356569556	490	PREDICTED: GDP-mannose transporter GONST	0.997	0.763	0.672	1e-147
297745928	396	unnamed protein product [Vitis vinifera]	0.994	0.941	0.683	1e-146
255569289	383	GDP-mannose transporter, putative [Ricin	0.877	0.859	0.726	1e-139
384551571	387	unnamed protein product [Oryza sativa Ja	0.968	0.937	0.632	1e-131
449467359	361	PREDICTED: GDP-mannose transporter GONST	0.850	0.883	0.674	1e-127
357114889	395	PREDICTED: GDP-mannose transporter GONST	0.826	0.784	0.7	1e-127

>gi|449518507|ref|XP_004166283.1| PREDICTED: LOW QUALITY PROTEIN: GDP-mannose transporter GONST2-like [Cucumis sativus]

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 274/394 (69%), Positives = 313/394 (79%), Gaps = 28/394 (7%)

Query: 2   SNFKLDVVIHGDSEEAAASSPNRKVTVSET--------RNIQNQG------------YTG 41
           S+FKL++    D EE   S  N  V  +E           I+NQG               
Sbjct: 23  SDFKLEI----DGEEPLVSIRNGNVEQNERGGTVHRLLSGIRNQGSKSISNFLTNAHRRA 78

Query: 42  LTDRLFRGSRAAVGGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLS 101
           L DR FRG++    G     ++GDE REHG   K+GP++SGTAYCISSCSM +LNKVVLS
Sbjct: 79  LGDRFFRGNQTVNNG----LLDGDETREHGLGRKTGPILSGTAYCISSCSMIILNKVVLS 134

Query: 102 TYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMY 161
            YNFNAGISLMFYQNLIS++V+ + G    VS+EKLNWKLI+LWIPVNLIFIGMLVSGMY
Sbjct: 135 GYNFNAGISLMFYQNLISSIVIILLGLCRTVSIEKLNWKLIRLWIPVNLIFIGMLVSGMY 194

Query: 162 SLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDT 221
           SLKYINIAMVTILKN+TNILTA+GE+Y+FRKRQNQKVWTAMFLMIISA+SG +TDL+FDT
Sbjct: 195 SLKYINIAMVTILKNVTNILTAIGEVYIFRKRQNQKVWTAMFLMIISAISGGVTDLTFDT 254

Query: 222 KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIF 281
            GY WQI NC+LTASYSLTLRR+MD+AK+ TRSGSLNE SMVLLNNLLSLPF + LI++F
Sbjct: 255 LGYGWQITNCVLTASYSLTLRRIMDEAKKLTRSGSLNEASMVLLNNLLSLPFGVVLIILF 314

Query: 282 DEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISL 341
            EW YVMN  VI+LP FWV ATASG LGLAISFTSMWFL QTGPTTYSLVGSLNKIPIS+
Sbjct: 315 GEWAYVMNADVIKLPTFWVIATASGLLGLAISFTSMWFLHQTGPTTYSLVGSLNKIPISI 374

Query: 342 AGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS 375
           AG++LF VPLS PN+FSILFGLFAG+FFARAKMS
Sbjct: 375 AGILLFKVPLSPPNLFSILFGLFAGVFFARAKMS 408

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359478564|ref|XP_002279549.2| PREDICTED: GDP-mannose transporter GONST2-like [Vitis vinifera]

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 270/391 (69%), Positives = 312/391 (79%), Gaps = 18/391 (4%)

Query: 2   SNFKLDVVIHGDSEEAAASSPNRKVTVSETRN--------IQNQGYTGLTD--------- 44
           S+F  DV I+ D +E+  SS N KVT+ E  N        ++ QG   +++         
Sbjct: 8   SDFNPDVDIYNDYKESDVSSLNGKVTLRERVNAVYKVLDGLRKQGNRSISNIAMNAEHKA 67

Query: 45  -RLFRGSRAAVGGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTY 103
            R FRG+RA    +  + ++G EKREHG   KS PL+SGTAYCISSCSM LLNK+VLS+Y
Sbjct: 68  TRYFRGTRAPSADSVNILIDGGEKREHGLGRKSEPLLSGTAYCISSCSMILLNKIVLSSY 127

Query: 104 NFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSL 163
            FNAGISLMFYQN IS++VV V    G  SVE+LNWKLI++WIPVN+IFIGMLVSGMYSL
Sbjct: 128 GFNAGISLMFYQNFISSVVVVVLALCGVASVERLNWKLIRVWIPVNIIFIGMLVSGMYSL 187

Query: 164 KYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKG 223
           KYINIAMVTILKN+TNILTA+GE Y+F K QNQKVWTAMFLMIISA+SG ITDLSF+ KG
Sbjct: 188 KYINIAMVTILKNVTNILTAIGEYYIFHKHQNQKVWTAMFLMIISAISGGITDLSFNLKG 247

Query: 224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDE 283
           Y WQI+NC+LTASYSLTLR VMDKAKQ TRSGSLNEVSMVLLNNLLSLPF++ LI +F E
Sbjct: 248 YVWQILNCVLTASYSLTLRLVMDKAKQLTRSGSLNEVSMVLLNNLLSLPFSILLIFLFGE 307

Query: 284 WRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAG 343
           W YV+N  V+ +PMFWV AT SG  GL+ISFTSMWFL QTGPTTYSLVGSLNKIPISLAG
Sbjct: 308 WEYVINVDVVRIPMFWVLATTSGLTGLSISFTSMWFLNQTGPTTYSLVGSLNKIPISLAG 367

Query: 344 LVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374
           +VLFNVPLS+PN FSILFGLFAG+FF +AKM
Sbjct: 368 IVLFNVPLSLPNFFSILFGLFAGVFFVKAKM 398

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224106291|ref|XP_002314115.1| predicted protein [Populus trichocarpa] gi|222850523|gb|EEE88070.1| predicted protein [Populus trichocarpa]

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/316 (81%), Positives = 282/316 (89%)

Query: 60  LPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLIS 119
           LP  GD KREHG   K GPLISGTAYCISSC M LLNK+ LSTYNFNAGISLMFYQNLIS
Sbjct: 1   LPNGGDGKREHGSGKKYGPLISGTAYCISSCGMILLNKIALSTYNFNAGISLMFYQNLIS 60

Query: 120 TLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTN 179
            LVVAV    G VSVEKLNWKL+++WIPVN+IF+GMLVSGMYSLKYINIAMVTILKN+TN
Sbjct: 61  CLVVAVLSLSGVVSVEKLNWKLVRVWIPVNVIFVGMLVSGMYSLKYINIAMVTILKNVTN 120

Query: 180 ILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSL 239
           I+TA+GELY+FRK QNQKVWTAMFLMIISA+SG ITDLSFD+ GY WQI+NCILTA YSL
Sbjct: 121 IITAIGELYIFRKHQNQKVWTAMFLMIISAISGGITDLSFDSMGYTWQIMNCILTACYSL 180

Query: 240 TLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFW 299
           TLR+VMD AKQ TRSGSLNE+SMVLLNNLLSLPF + LIL+FDEW Y++ T VI+LPMFW
Sbjct: 181 TLRKVMDTAKQLTRSGSLNEISMVLLNNLLSLPFGIILILLFDEWEYIITTDVIKLPMFW 240

Query: 300 VAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSI 359
           V ATASG LGLAISFTS+WFL QTGPTTYSLVGSLNKIP+S AGLVLF VPLS+PN+FSI
Sbjct: 241 VVATASGLLGLAISFTSLWFLHQTGPTTYSLVGSLNKIPLSFAGLVLFKVPLSLPNLFSI 300

Query: 360 LFGLFAGIFFARAKMS 375
            FGLFAGIFFARAKMS
Sbjct: 301 FFGLFAGIFFARAKMS 316

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240254028|ref|NP_172209.4| golgi nucleotide sugar transporter 2 [Arabidopsis thaliana] gi|75146971|sp|Q84L09.1|GONS2_ARATH RecName: Full=GDP-mannose transporter GONST2; AltName: Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 2 gi|29329819|emb|CAD83086.1| GONST2 Golgi Nucleotide sugar transporter [Arabidopsis thaliana] gi|332189982|gb|AEE28103.1| golgi nucleotide sugar transporter 2 [Arabidopsis thaliana]

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 258/381 (67%), Positives = 306/381 (80%), Gaps = 12/381 (3%)

Query: 1   MSNFKLDVVIHGDSEEAAAS------SPNRKVTVSETRNIQNQGYTGLTDRLFRGSRAAV 54
           MS  KL+ ++  + +E+  S      S  +   V +  + ++  +   ++R  R  R   
Sbjct: 1   MSAVKLEAIVCHEPDESELSHLSDNGSKTKNGVVFQLLDQKSSEHRWFSERFLRWRRR-- 58

Query: 55  GGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFY 114
                LPV+GD +R+HG   +SGPL+SG AYCISSCSM +LNK+VLS+YNFNAG+SLM Y
Sbjct: 59  ----YLPVDGDNRRDHGSVKQSGPLVSGAAYCISSCSMIILNKIVLSSYNFNAGVSLMLY 114

Query: 115 QNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL 174
           QNLIS LVVAV    G VSVEK NWKLI++W+PVN+IF+GMLVSGMYSLKYIN+AMVTIL
Sbjct: 115 QNLISCLVVAVLDISGVVSVEKFNWKLIRVWMPVNVIFVGMLVSGMYSLKYINVAMVTIL 174

Query: 175 KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILT 234
           KN TNILT +GE+YMFRKRQN KVW AMF+MIISA+SG ITDL+FD  GY WQ+ NC LT
Sbjct: 175 KNATNILTGIGEVYMFRKRQNNKVWAAMFMMIISAISGGITDLTFDAVGYTWQLANCFLT 234

Query: 235 ASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIE 294
           ASYSLTLRRVMDKAKQ+T+SGSLNEVSMVLLNNLLS+PF + LI++  EWRYV++T V +
Sbjct: 235 ASYSLTLRRVMDKAKQSTKSGSLNEVSMVLLNNLLSIPFGIILIILLGEWRYVISTDVTK 294

Query: 295 LPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVP 354
             MFWV ATASGFLGLAISFTSMWFL QTGPTTYSLVGSLNK+PISLAGLVLFNVPLS+P
Sbjct: 295 DSMFWVVATASGFLGLAISFTSMWFLHQTGPTTYSLVGSLNKVPISLAGLVLFNVPLSLP 354

Query: 355 NMFSILFGLFAGIFFARAKMS 375
           N+FSILFGLFAG+ FARAKMS
Sbjct: 355 NLFSILFGLFAGVVFARAKMS 375

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356569556|ref|XP_003552965.1| PREDICTED: GDP-mannose transporter GONST2-like [Glycine max]

 Score =  526 bits (1355), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/391 (67%), Positives = 308/391 (78%), Gaps = 17/391 (4%)

Query: 2   SNFKLDVVIHGDSEEAA-ASSPNRKVTVSETRN----IQNQGYTG------------LTD 44
           S+FKLD+    DSEE    ++   K+ + E  N    I+ QG               L D
Sbjct: 100 SDFKLDIFSQHDSEEPGLGTTITSKMFLDEKANSVQTIREQGKLSINNFATNAERRTLND 159

Query: 45  RLFRGSRAAVGGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYN 104
           R  + ++A +G N  L  E +    HG A KSGPLISG AYCISSCSM +LNK+VLS YN
Sbjct: 160 RFLKANKATIGDNVSLLDEEERHHLHGSAKKSGPLISGAAYCISSCSMIMLNKIVLSGYN 219

Query: 105 FNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLK 164
           F+AGISLMFYQN I+TLVV +    G +SVEKL+W+LI+ WIPVN+IFIGMLVSGMYSLK
Sbjct: 220 FDAGISLMFYQNFIATLVVVLLSLSGRISVEKLSWRLIRAWIPVNVIFIGMLVSGMYSLK 279

Query: 165 YINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGY 224
           YIN+AMVTILKNMTNILTA+GELY+FRKRQ+ KVWTAMF+MIISAVSG ITDLSFD  GY
Sbjct: 280 YINVAMVTILKNMTNILTAIGELYLFRKRQSPKVWTAMFMMIISAVSGGITDLSFDAVGY 339

Query: 225 AWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEW 284
            WQI+NC+LTASYSLTLRRVMD+AK AT+SGSLNEVSMVLLNN LSLPFA+ LI +F EW
Sbjct: 340 TWQIINCVLTASYSLTLRRVMDEAKNATKSGSLNEVSMVLLNNSLSLPFAIILIFLFGEW 399

Query: 285 RYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGL 344
            YV++  V++LP+FWV ATASG LGL+ISFTSMWFL QT PTTYSLVGSLNKIPIS+AG+
Sbjct: 400 DYVIHADVVKLPIFWVVATASGLLGLSISFTSMWFLHQTSPTTYSLVGSLNKIPISIAGI 459

Query: 345 VLFNVPLSVPNMFSILFGLFAGIFFARAKMS 375
           ++F VPLSV N+FSILFGLFAG+ FARAKMS
Sbjct: 460 LVFKVPLSVSNLFSILFGLFAGVLFARAKMS 490

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297745928|emb|CBI15984.3| unnamed protein product [Vitis vinifera]

 Score =  523 bits (1347), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 266/389 (68%), Positives = 306/389 (78%), Gaps = 16/389 (4%)

Query: 2   SNFKLDVVIHGDSEEAAASSPNRKVTVSETRN--------IQNQGYTGLTDRLFRGSRAA 53
           S+F  DV I+ D +E+  SS N KVT+ E  N        ++ QG   +++        A
Sbjct: 8   SDFNPDVDIYNDYKESDVSSLNGKVTLRERVNAVYKVLDGLRKQGNRSISNIAMNAEHKA 67

Query: 54  V--------GGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNF 105
                      N  + ++G EKREHG   KS PL+SGTAYCISSCSM LLNK+VLS+Y F
Sbjct: 68  TRYNMFIFSSSNVNILIDGGEKREHGLGRKSEPLLSGTAYCISSCSMILLNKIVLSSYGF 127

Query: 106 NAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKY 165
           NAGISLMFYQN IS++VV V    G  SVE+LNWKLI++WIPVN+IFIGMLVSGMYSLKY
Sbjct: 128 NAGISLMFYQNFISSVVVVVLALCGVASVERLNWKLIRVWIPVNIIFIGMLVSGMYSLKY 187

Query: 166 INIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYA 225
           INIAMVTILKN+TNILTA+GE Y+F K QNQKVWTAMFLMIISA+SG ITDLSF+ KGY 
Sbjct: 188 INIAMVTILKNVTNILTAIGEYYIFHKHQNQKVWTAMFLMIISAISGGITDLSFNLKGYV 247

Query: 226 WQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWR 285
           WQI+NC+LTASYSLTLR VMDKAKQ TRSGSLNEVSMVLLNNLLSLPF++ LI +F EW 
Sbjct: 248 WQILNCVLTASYSLTLRLVMDKAKQLTRSGSLNEVSMVLLNNLLSLPFSILLIFLFGEWE 307

Query: 286 YVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLV 345
           YV+N  V+ +PMFWV AT SG  GL+ISFTSMWFL QTGPTTYSLVGSLNKIPISLAG+V
Sbjct: 308 YVINVDVVRIPMFWVLATTSGLTGLSISFTSMWFLNQTGPTTYSLVGSLNKIPISLAGIV 367

Query: 346 LFNVPLSVPNMFSILFGLFAGIFFARAKM 374
           LFNVPLS+PN FSILFGLFAG+FF +AKM
Sbjct: 368 LFNVPLSLPNFFSILFGLFAGVFFVKAKM 396

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569289|ref|XP_002525612.1| GDP-mannose transporter, putative [Ricinus communis] gi|223535048|gb|EEF36730.1| GDP-mannose transporter, putative [Ricinus communis]

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 244/336 (72%), Positives = 275/336 (81%), Gaps = 7/336 (2%)

Query: 1   MSNFKLDVVIHGDSEEAAASSPNRKVTVSETRN-------IQNQGYTGLTDRLFRGSRAA 53
           MS+FKL+VVI  D EE   +  N+ +  S  +          N     + DR FRG++ +
Sbjct: 5   MSDFKLEVVIPNDYEEPEPNEVNKILNDSGKQGSNLIGNFATNAERRAIADRFFRGNQVS 64

Query: 54  VGGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMF 113
              + + P EGDEKREHG   KSGPL+SG AYC SSCSM LLNKVVLS YNFNAGISLM 
Sbjct: 65  HSDSVRAPFEGDEKREHGSGRKSGPLLSGMAYCFSSCSMILLNKVVLSIYNFNAGISLML 124

Query: 114 YQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTI 173
           YQNLI  LVVAV GF GAVSVEKLNWKL+++W+PVN IF+GMLVSGMYSLKYINIAMVTI
Sbjct: 125 YQNLICCLVVAVLGFCGAVSVEKLNWKLVRVWLPVNAIFVGMLVSGMYSLKYINIAMVTI 184

Query: 174 LKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCIL 233
           LKN+TNILTA+GELY+FRK QNQKVWTAMFLM+ISA+SG ITDLSFD  GY WQI+NC+L
Sbjct: 185 LKNVTNILTAIGELYIFRKHQNQKVWTAMFLMMISAISGGITDLSFDAMGYLWQIMNCVL 244

Query: 234 TASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVI 293
           TASYSLTLRRVMDKAKQ+TRSGSLNE+SMVLLNNLLSLPF +FLIL+FDEW+YVMN  VI
Sbjct: 245 TASYSLTLRRVMDKAKQSTRSGSLNEISMVLLNNLLSLPFGIFLILLFDEWKYVMNVDVI 304

Query: 294 ELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYS 329
           +LPMFWV ATASG LGLAISFTSMWFL QTGPTTYS
Sbjct: 305 KLPMFWVVATASGLLGLAISFTSMWFLHQTGPTTYS 340

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|384551571|dbj|BAM11305.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  473 bits (1216), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 241/381 (63%), Positives = 284/381 (74%), Gaps = 18/381 (4%)

Query: 11  HGDSEEAAASSPNRKVTVSETRNIQNQGYTGLTDRLFRGSRA--AVGGNFKLPVEGD--- 65
           + D EEA   SPN  V     +N     Y  +   L + + +   V  N       +   
Sbjct: 9   YDDIEEA--KSPNTSVAAVAVKNADASVYKIIHGFLKQKNNSIIKVAANVARKAASNKLS 66

Query: 66  -----------EKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFY 114
                      +K++     K+GPL+SG  YCI+SCSM LLNKVVLS YNFNAGISLM Y
Sbjct: 67  RKTSDVFDSLIQKQQSKWGNKTGPLLSGICYCIASCSMILLNKVVLSNYNFNAGISLMLY 126

Query: 115 QNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL 174
           QNLIS +++ V   FG +S EKL WKLIK+WIPVNLIF+GMLV+GMYSLKYIN+AMVTIL
Sbjct: 127 QNLISVIILLVLELFGVISTEKLTWKLIKVWIPVNLIFVGMLVTGMYSLKYINVAMVTIL 186

Query: 175 KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILT 234
           KNMTNILTAVGE+Y+FRK QN+KVW A+ LM+ISAV G ITDLSF   GY WQ+ NC LT
Sbjct: 187 KNMTNILTAVGEIYIFRKGQNKKVWAALCLMVISAVCGGITDLSFHPVGYMWQLFNCFLT 246

Query: 235 ASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIE 294
           A YSLTLRRVMD AKQ+T+SGSLNEVSMVLLNN LS+P A+ LI+IFDEW+YV    V  
Sbjct: 247 AGYSLTLRRVMDVAKQSTKSGSLNEVSMVLLNNALSIPLALILIVIFDEWQYVYEVEVTR 306

Query: 295 LPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVP 354
            PMFW  ATASG LGLAISF+S+WFL +TGPTTYSLVGSLNKIPIS+AG++LFNVP+SV 
Sbjct: 307 DPMFWAFATASGLLGLAISFSSVWFLHRTGPTTYSLVGSLNKIPISVAGILLFNVPVSVE 366

Query: 355 NMFSILFGLFAGIFFARAKMS 375
           N+FSI+FGLFAGIFFA+AKMS
Sbjct: 367 NLFSIIFGLFAGIFFAKAKMS 387

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449467359|ref|XP_004151391.1| PREDICTED: GDP-mannose transporter GONST2-like, partial [Cucumis sativus]

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 234/347 (67%), Positives = 268/347 (77%), Gaps = 28/347 (8%)

Query: 2   SNFKLDVVIHGDSEEAAASSPNRKVTVSET--------RNIQNQG------------YTG 41
           S+FKL++    D EE   S  N  V  +E           I+NQG               
Sbjct: 23  SDFKLEI----DGEEPLVSIRNGNVEQNERGGTVHRLLSGIRNQGSKSISNFLTNAQRRA 78

Query: 42  LTDRLFRGSRAAVGGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLS 101
           L DR FRG++    G     ++GDE REHG   K+GP++SGTAYCISSCSM +LNKVVLS
Sbjct: 79  LGDRFFRGNQTVNNG----LLDGDETREHGLGRKTGPILSGTAYCISSCSMIILNKVVLS 134

Query: 102 TYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMY 161
            YNFNAGISLMFYQNLIS++V+ + G    VS+EKLNWKLI+LWIPVNLIFIGMLVSGMY
Sbjct: 135 GYNFNAGISLMFYQNLISSIVIILLGLCRTVSIEKLNWKLIRLWIPVNLIFIGMLVSGMY 194

Query: 162 SLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDT 221
           SLKYINIAMVTILKN+TNILTA+GE+Y+FRKRQNQKVWTAMFLMIISA+SG +TDL+FDT
Sbjct: 195 SLKYINIAMVTILKNVTNILTAIGEVYIFRKRQNQKVWTAMFLMIISAISGGVTDLTFDT 254

Query: 222 KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIF 281
            GY WQI NC+LTASYSLTLRR+MD+AK+ TRSGSLNE SMVLLNNLLSLPF + LI++F
Sbjct: 255 LGYGWQITNCVLTASYSLTLRRIMDEAKKLTRSGSLNEASMVLLNNLLSLPFGVVLIILF 314

Query: 282 DEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTY 328
            EW YVMN  VI+LP FWV ATASG LGLAISFTSMWFL QTGPTTY
Sbjct: 315 GEWAYVMNADVIKLPTFWVIATASGLLGLAISFTSMWFLHQTGPTTY 361

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357114889|ref|XP_003559226.1| PREDICTED: GDP-mannose transporter GONST2-like [Brachypodium distachyon]

 Score =  460 bits (1183), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 217/310 (70%), Positives = 265/310 (85%)

Query: 66  EKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAV 125
           ++++     ++GPL+SG +YCI+SCSM LLNKVVLS+YNFNAGISLM YQNLIS +++  
Sbjct: 84  QQQQSKWGNRTGPLLSGISYCIASCSMILLNKVVLSSYNFNAGISLMLYQNLISVVILLA 143

Query: 126 FGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVG 185
              F  +S E+L WKLIK+WIPVN+IFIGMLV+GMYSLKYIN+AMVTILKNMTNILTA+G
Sbjct: 144 LELFSVISTEELTWKLIKVWIPVNIIFIGMLVTGMYSLKYINVAMVTILKNMTNILTAMG 203

Query: 186 ELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVM 245
           E+Y+F+K QN++VW A+ +MI+SAV G +TDLSF   GY WQI+NC LTA+YSLTLRR+M
Sbjct: 204 EIYVFKKGQNKQVWAALLMMIVSAVCGGMTDLSFHLVGYTWQILNCFLTAAYSLTLRRLM 263

Query: 246 DKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATAS 305
           D AKQ+T+SGSLNEVSMVLLNN LS+PFA+ LI++F EW YV    VI  PMFW  ATAS
Sbjct: 264 DTAKQSTKSGSLNEVSMVLLNNALSIPFAVILIIVFSEWEYVYQAEVIREPMFWFFATAS 323

Query: 306 GFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFA 365
           G LGLAISF+S+WFLQ+T PTTYSLVGSLNKIPIS+AG++LF VP+SV N+FSI+FGLFA
Sbjct: 324 GLLGLAISFSSVWFLQETSPTTYSLVGSLNKIPISVAGILLFKVPVSVENLFSIVFGLFA 383

Query: 366 GIFFARAKMS 375
           GIFFA+AKMS
Sbjct: 384 GIFFAKAKMS 393

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	375
TAIR|locus:2025047	375	GONST2 "AT1G07290" [Arabidopsi	0.984	0.984	0.627	1.2e-122
TAIR|locus:2054090	333	GONST1 "AT2G13650" [Arabidopsi	0.789	0.888	0.608	4.2e-95
ASPGD|ASPL0000072017	379	gmtA [Emericella nidulans (tax	0.88	0.870	0.284	3.2e-33
POMBASE|SPAC144.18	345	vrg4 "Golgi GDP-mannose transp	0.778	0.846	0.270	3.7e-32
CGD|CAL0002875	371	VRG4 [Candida albicans (taxid:	0.773	0.781	0.296	7.7e-32
UNIPROTKB|Q5A477	371	VRG4 "GDP-mannose transporter"	0.773	0.781	0.296	7.7e-32
SGD|S000003193	337	VRG4 "Golgi GDP-mannose transp	0.784	0.872	0.288	3e-30
SGD|S000000841	249	HVG1 "Protein of unknown funct	0.562	0.847	0.294	3e-21
DICTYBASE|DDB_G0278631	382	DDB_G0278631 "DUF250 family pr	0.714	0.701	0.240	1.3e-19
DICTYBASE|DDB_G0276625	314	DDB_G0276625 "TPT transporter	0.744	0.888	0.234	2.3e-16

TAIR|locus:2025047 GONST2 "AT1G07290" [Arabidopsis thaliana (taxid:3702)]

 Score = 1206 (429.6 bits), Expect = 1.2e-122, P = 1.2e-122
 Identities = 239/381 (62%), Positives = 285/381 (74%)

Query:     1 MSNFKLDVVIHGDSEEAAAS--SPNRKVT----VSETRNIQNQGYTGLTDRLFRGSRAAV 54
             MS  KL+ ++  + +E+  S  S N   T    V +  + ++  +   ++R  R  R   
Sbjct:     1 MSAVKLEAIVCHEPDESELSHLSDNGSKTKNGVVFQLLDQKSSEHRWFSERFLRWRRRY- 59

Query:    55 GGNFKLPVEGDEKREHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFY 114
                  LPV+GD +R+HG   +SGPL+SG AYCISSCSM +LNK+VLS+YNFNAG+SLM Y
Sbjct:    60 -----LPVDGDNRRDHGSVKQSGPLVSGAAYCISSCSMIILNKIVLSSYNFNAGVSLMLY 114

Query:   115 QNLISTLXXXXXXXXXXXSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL 174
             QNLIS L           SVEK NWKLI++W+PVN+IF+GMLVSGMYSLKYIN+AMVTIL
Sbjct:   115 QNLISCLVVAVLDISGVVSVEKFNWKLIRVWMPVNVIFVGMLVSGMYSLKYINVAMVTIL 174

Query:   175 KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILT 234
             KN TNILT +GE+YMFRKRQN KVW AMF+MIISA+SG ITDL+FD  GY WQ+ NC LT
Sbjct:   175 KNATNILTGIGEVYMFRKRQNNKVWAAMFMMIISAISGGITDLTFDAVGYTWQLANCFLT 234

Query:   235 ASYSLTLRRVMDKAKQATRSGXXXXXXXXXXXXXXXXPFAMFLILIFDEWRYVMNTGVIE 294
             ASYSLTLRRVMDKAKQ+T+SG                PF + LI++  EWRYV++T V +
Sbjct:   235 ASYSLTLRRVMDKAKQSTKSGSLNEVSMVLLNNLLSIPFGIILIILLGEWRYVISTDVTK 294

Query:   295 LPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVP 354
               MFWV ATASGFLGLAISFTSMWFL QTGPTTYSLVGSLNK+PISLAGLVLFNVPLS+P
Sbjct:   295 DSMFWVVATASGFLGLAISFTSMWFLHQTGPTTYSLVGSLNKVPISLAGLVLFNVPLSLP 354

Query:   355 NMFSILFGLFAGIFFARAKMS 375
             N+FSILFGLFAG+ FARAKMS
Sbjct:   355 NLFSILFGLFAGVVFARAKMS 375

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISS

GO:0015780 "nucleotide-sugar transport" evidence=IGI

GO:0015784 "GDP-mannose transport" evidence=IGI

TAIR|locus:2054090 GONST1 "AT2G13650" [Arabidopsis thaliana (taxid:3702)]

 Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
 Identities = 180/296 (60%), Positives = 219/296 (73%)

Query:    79 LISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLXXXXXXXXXXXSVEKLN 138
             L+SG AYCISSCSM L+NK VLS+YNFNAGI LM YQN +S +           + E L 
Sbjct:    34 LLSGLAYCISSCSMILVNKFVLSSYNFNAGIFLMLYQNFVSVIIVVGLSLMGLITTEPLT 93

Query:   139 WKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKV 198
              +L+K+W PVN+IF+GML++ M+SLKYIN+AMVT+LKN+TN++TAVGE+Y+F K+ + +V
Sbjct:    94 LRLMKVWFPVNVIFVGMLITSMFSLKYINVAMVTVLKNVTNVITAVGEMYLFNKQHDNRV 153

Query:   199 WTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGXXX 258
             W A+FLMIISAVSG ITDLSF+  GYAWQI NC LTASYSLTLR+ MD AKQ T+SG   
Sbjct:   154 WAALFLMIISAVSGGITDLSFNAVGYAWQIANCFLTASYSLTLRKTMDTAKQVTQSGNLN 213

Query:   259 XXXXXXXXXXXXXPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMW 318
                          P  + L   F+E  Y+  T ++ LP FW+  T SG LGLAISFTSMW
Sbjct:   214 EFSMVLLNNTLSLPLGLLLSYFFNEMDYLYQTPLLRLPSFWMVMTLSGLLGLAISFTSMW 273

Query:   319 FLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM 374
             FL QTG TTYSLVGSLNKIP+S+AG+VLFNVP S+ N  SILFGL AG+ FARAKM
Sbjct:   274 FLHQTGATTYSLVGSLNKIPLSIAGIVLFNVPTSLQNSASILFGLVAGVVFARAKM 329

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0005886 "plasma membrane" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISS

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IDA

GO:0015784 "GDP-mannose transport" evidence=IGI;IDA;IMP

ASPGD|ASPL0000072017 gmtA [Emericella nidulans (taxid:162425)]

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 103/362 (28%), Positives = 172/362 (47%)

Query:    31 TRNIQNQGYTGLTDRLFRGSRAAVGGNFKLPVEGDEKREH-GPAVKSGPLISGTAYCISS 89
             T N + + YT   D+L +        N++ P    + R     ++ +   +S  AYC SS
Sbjct:     2 TDNRKPEDYTIEMDKLGQNK------NYQAPPPPPQPRSSTASSISNNAALSVLAYCGSS 55

Query:    90 CSMTLLNKVVLSTYNFNAGISLMFYQNLISTLXXXXXXXXXXXSVEKLNWKLIKLWIPVN 149
               MT++NK VLS+ +FN    L+  Q+L+  +           +    N    + W P+ 
Sbjct:    56 ILMTVMNKYVLSS-DFNLNFFLLCVQSLVCIIAIQLCKACGLITYRDFNLDEARKWFPIT 114

Query:   150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISA 209
             L+ IGM+ +G  +L++++I + TI KN+T IL A GE+  F          +  LM+ S+
Sbjct:   115 LLLIGMIYTGSKALQFLSIPVYTIFKNLTIILIAYGEVLWFGGSVTNLTLFSFGLMVFSS 174

Query:   210 V-------------SGSITD-LSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSG 255
             +             SG  T  +S    GY W ++NC+ T+SY L +R+   + K      
Sbjct:   175 IIAAWADIKHAIESSGDATSKVSTLNAGYIWMLINCLCTSSYVLGMRK---RIKLTN--- 228

Query:   256 XXXXXXXXXXXXXXXXPFAMFLILIFDEW---RYVMNTGVIELPMFWVAATASGFLGLAI 312
                             P  +    I ++W       N    +      A   SG   + I
Sbjct:   229 -FKDFDTMFYNNLLSIPVLIVCSGILEDWSPANVARNFPSADRNGIMFAMILSGLSTVFI 287

Query:   313 SFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372
             S+TS W ++ T  TTYS+VG+LNK+PI+L+GL+ F+ P++ P++ +I+ G  +GI +A A
Sbjct:   288 SYTSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFDAPVTFPSVSAIMVGFVSGIVYAVA 347

Query:   373 KM 374
             K+
Sbjct:   348 KI 349

GO:0007163 "establishment or maintenance of cell polarity" evidence=IMP

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015784 "GDP-mannose transport" evidence=IEA

GO:0051278 "fungal-type cell wall polysaccharide biosynthetic process" evidence=IEA

POMBASE|SPAC144.18 vrg4 "Golgi GDP-mannose transporter Vrg4 (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 84/311 (27%), Positives = 154/311 (49%)

Query:    74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLXXXXXXXXXXXS 133
             +   P++   +YC++S  MTL NK VLS+  +N    L+  Q+ +              +
Sbjct:     9 ISKSPILPVVSYCMASILMTLTNKYVLSSPGYNMNFLLLTVQSTVCVAAIGILKRLKVIN 68

Query:   134 VEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKR 193
                 +++  K W P++ + + M+ +   +L+++++ + TI KN+T I+ A GE+  F   
Sbjct:    69 YRDFDFREAKFWFPISFLLVAMIYTASKALQFLSVPVYTIFKNLTIIIIAYGEVLWFGGH 128

Query:   194 QNQKVWTAMFLMIISAVSGSITDL---SFDTK----GYAWQIVNCILTASYSLTLRRVMD 246
                    +  LM++S++  +  D+   SF ++    GY W ++NC+  A++ L +R+   
Sbjct:   129 VTALTLFSFGLMVLSSIVAAWADIQSSSFASQTLNSGYLWMVLNCLTNAAFVLAMRK--- 185

Query:   247 KAKQATRSGXXXXXXXXXXXXXXXXPFAMFLILIFDEWRYVMNTGVIELP--MFWV--AA 302
             + K                      P  +   L  ++W    N      P   F V  A 
Sbjct:   186 RIKLTN----FRDFDTMFYNNLLSIPVLVICTLFTEDWS-AENIAQNFPPDAKFGVLMAM 240

Query:   303 TASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFG 362
               SG   + IS+TS W ++ T  TTYS+VG+LNK+P+++AGLV F+ P++  ++ +IL G
Sbjct:   241 AISGVSSVGISYTSAWCVRVTSSTTYSMVGALNKLPLAIAGLVFFDAPITFGSVTAILLG 300

Query:   363 LFAGIFFARAK 373
               +G+ +A AK
Sbjct:   301 FISGVVYAVAK 311

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=ISO

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0015780 "nucleotide-sugar transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

CGD|CAL0002875 VRG4 [Candida albicans (taxid:5476)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 92/310 (29%), Positives = 148/310 (47%)

Query:    76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLXXXXXXXXXXXSVE 135
             SGP IS  AYC+SS  MT+ NK VLS ++FN    L+  Q+++  +           +  
Sbjct:    55 SGP-ISIAAYCLSSILMTVTNKYVLSGFSFNLNFFLLAVQSIVCIVTIGSLKSLNIITYR 113

Query:   136 KLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQN 195
             + N    K W P+  + + M+ +   +L+Y++I + TI KN+T IL A GE+  F  +  
Sbjct:   114 QFNKDEAKKWSPIAFLLVAMIYTSSKALQYLSIPVYTIFKNLTIILIAYGEVIWFGGKVT 173

Query:   196 QKVWTAMFLMIISAVSGSITD----LSFDTK-----GYAWQIVNCILTASYSLTLRRVMD 246
                 ++  LM++S+V     D     S D       GY W + NC  +A++ L +R+   
Sbjct:   174 TMALSSFLLMVLSSVIAYYGDNAAVKSHDDAFALYLGYFWMLTNCFASAAFVLIMRK--- 230

Query:   247 KAKQATRSGXXXXXXXXXXXXXXXXPFAMFLILIFDEWRYV---MNTGVIELPMFWVAAT 303
             + K                      P  +    IF++W      +N           A  
Sbjct:   231 RIKLTN----FKDFDTMYYNNLLSIPILLICSFIFEDWSSANVSLNFPADNRVTTITAMI 286

Query:   304 ASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGL 363
              SG   + IS+ S W ++ T  TTYS+VG+LNK+PI+L+GL+ F   ++  ++ SI  G 
Sbjct:   287 LSGASSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFEAAVNFWSVSSIFVGF 346

Query:   364 FAGIFFARAK 373
              AG+ +A AK
Sbjct:   347 GAGLVYAVAK 356

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0015784 "GDP-mannose transport" evidence=IGI

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IGI

GO:0030448 "hyphal growth" evidence=IMP

GO:0006486 "protein glycosylation" evidence=IMP

GO:0005739 "mitochondrion" evidence=IEA

GO:0006487 "protein N-linked glycosylation" evidence=IEA

UNIPROTKB|Q5A477 VRG4 "GDP-mannose transporter" [Candida albicans SC5314 (taxid:237561)]

 Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
 Identities = 92/310 (29%), Positives = 148/310 (47%)

Query:    76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLXXXXXXXXXXXSVE 135
             SGP IS  AYC+SS  MT+ NK VLS ++FN    L+  Q+++  +           +  
Sbjct:    55 SGP-ISIAAYCLSSILMTVTNKYVLSGFSFNLNFFLLAVQSIVCIVTIGSLKSLNIITYR 113

Query:   136 KLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQN 195
             + N    K W P+  + + M+ +   +L+Y++I + TI KN+T IL A GE+  F  +  
Sbjct:   114 QFNKDEAKKWSPIAFLLVAMIYTSSKALQYLSIPVYTIFKNLTIILIAYGEVIWFGGKVT 173

Query:   196 QKVWTAMFLMIISAVSGSITD----LSFDTK-----GYAWQIVNCILTASYSLTLRRVMD 246
                 ++  LM++S+V     D     S D       GY W + NC  +A++ L +R+   
Sbjct:   174 TMALSSFLLMVLSSVIAYYGDNAAVKSHDDAFALYLGYFWMLTNCFASAAFVLIMRK--- 230

Query:   247 KAKQATRSGXXXXXXXXXXXXXXXXPFAMFLILIFDEWRYV---MNTGVIELPMFWVAAT 303
             + K                      P  +    IF++W      +N           A  
Sbjct:   231 RIKLTN----FKDFDTMYYNNLLSIPILLICSFIFEDWSSANVSLNFPADNRVTTITAMI 286

Query:   304 ASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGL 363
              SG   + IS+ S W ++ T  TTYS+VG+LNK+PI+L+GL+ F   ++  ++ SI  G 
Sbjct:   287 LSGASSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALSGLIFFEAAVNFWSVSSIFVGF 346

Query:   364 FAGIFFARAK 373
              AG+ +A AK
Sbjct:   347 GAGLVYAVAK 356

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IGI

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006486 "protein glycosylation" evidence=IMP

GO:0015784 "GDP-mannose transport" evidence=IGI

GO:0030448 "hyphal growth" evidence=IMP

SGD|S000003193 VRG4 "Golgi GDP-mannose transporter" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 94/326 (28%), Positives = 150/326 (46%)

Query:    70 HGP---AVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLXXXXX 126
             H P      SGP IS  +YC SS  MT+ NK V++  +FN    ++F Q+L+ T+     
Sbjct:    11 HNPWASVANSGP-ISILSYCGSSILMTVTNKFVVNLKDFNMNFVMLFVQSLVCTITLIIL 69

Query:   127 XXXXXXSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGE 186
                       LN    K W P++ + + M+ +   +L+Y+ + + TI KN+T IL A GE
Sbjct:    70 RILGYAKFRSLNKTDAKNWFPISFLLVLMIYTSSKALQYLAVPIYTIFKNLTIILIAYGE 129

Query:   187 LYMFRKRQNQKVWTAMFLMIISAV-------------SGSITD------LSFDTKGYAWQ 227
             +  F         ++  LM++S+V             + S+ +       SF+  GY W 
Sbjct:   130 VLFFGGSVTSMELSSFLLMVLSSVVATWGDQQAVAAKAASLAEGAAGAVASFNP-GYFWM 188

Query:   228 IVNCILTASYSLTLRRVMDKAKQATRSGXXXXXXXXXXXXXXXXPFAMFLILIFDEWRYV 287
               NCI +A + L +R+   + K                      P  +      ++W  V
Sbjct:   189 FTNCITSALFVLIMRK---RIKLTN----FKDFDTMFYNNVLALPILLLFSFCVEDWSSV 241

Query:   288 MNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLF 347
               T          A   SG   + IS+ S W ++ T  TTYS+VG+LNK+PI+L+GL+ F
Sbjct:   242 NLTNNFSNDSL-TAMIISGVASVGISYCSGWCVRVTSSTTYSMVGALNKLPIALSGLIFF 300

Query:   348 NVPLSVPNMFSILFGLFAGIFFARAK 373
             + P +  ++ SI  G  +GI +A AK
Sbjct:   301 DAPRNFLSILSIFIGFLSGIIYAVAK 326

GO:0005739 "mitochondrion" evidence=IDA

GO:0005458 "GDP-mannose transmembrane transporter activity" evidence=IMP;IDA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA;IDA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0015784 "GDP-mannose transport" evidence=IMP

GO:0015780 "nucleotide-sugar transport" evidence=IEA

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0055085 "transmembrane transport" evidence=IEA

SGD|S000000841 HVG1 "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 249 (92.7 bits), Expect = 3.0e-21, P = 3.0e-21
 Identities = 71/241 (29%), Positives = 111/241 (46%)

Query:   155 MLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAV---- 210
             M+ +   SL+Y+ + + TI KN+T IL A GE+  F  +      T+  +M++S+V    
Sbjct:     1 MIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGKVTSMELTSFIMMVLSSVVATW 60

Query:   211 ---------SGSITDLSFD---------TKGYAWQIVNCILTASYSLTLRRVMDKAKQAT 252
                      + S+ DL  +           GY W   NCI +A + L +R+ +       
Sbjct:    61 GDQQAIAIKASSLEDLDQELVESTIFVLNPGYLWMFTNCISSALFVLIMRKRI------- 113

Query:   253 RSGXXXXXXXXXXXXXXXXPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAI 312
             R                  P  +    I ++W    N  V        A   SG + + I
Sbjct:   114 RLTNFKDYDTMFYNNVLALPLLLVFSFIMEDWS-TKNLSVNLSADSLAAMVISGLMSVGI 172

Query:   313 SFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA 372
             S+ S W ++ T  TTYS+VG+LNK+PI+LAGLV F+ P +  + FSI  G  +G+ +A A
Sbjct:   173 SYCSGWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPKNFLSFFSIFLGFLSGLLYAVA 232

Query:   373 K 373
             K
Sbjct:   233 K 233

GO:0005338 "nucleotide-sugar transmembrane transporter activity" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0055085 "transmembrane transport" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0015780 "nucleotide-sugar transport" evidence=IEA

DICTYBASE|DDB_G0278631 DDB_G0278631 "DUF250 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 246 (91.7 bits), Expect = 1.3e-19, P = 1.3e-19
 Identities = 67/279 (24%), Positives = 134/279 (48%)

Query:    99 VLSTYNFNAGISLMFYQNLISTLXXXXXXXXXXXSVE-KLNWKLIKLWIPVNLIFIGMLV 157
             V++TY+F+A   L+F Q +++ +            +      + IK  +P++  +I  ++
Sbjct:   111 VMTTYDFSASNFLLFNQMVVTIVILHILKHFNILKINTNFEKETIKKLMPLSFCYIINVL 170

Query:   158 SGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL 217
              G+ SLK +NI M + LK +  ++  V E ++ +K    K+  ++ +M+I AV   ITDL
Sbjct:   171 LGLDSLKQLNIPMYSALKRLVAVVILVMEYFILKKVSPPKIIASVVVMVIGAVVAGITDL 230

Query:   218 SFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGXXXXXXXXXXXXXXXXPFAMFL 277
             SF++ GY+  +++CI  ASY + +++V   +  +T                   P  +FL
Sbjct:   231 SFNSLGYSLVLLSCIFQASYLIYVKKVA--SNMSTYD-------MLYYNSVLSLPITIFL 281

Query:   278 ILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKI 337
             +++  E  Y      +    F      S FLG  ++F   +      P T S+ G +  I
Sbjct:   282 MIVNQEIEYFQTFEHLYDSSFQAYFILSIFLGFFLNFCIFFCTSVNSPLTTSVTGQVKNI 341

Query:   338 PISLAGLVLFNVPLSVP-NMFSILFGLFAGIFFARAKMS 375
               ++ G ++FN  +  P N+  ++  +   I+++  K++
Sbjct:   342 ASTIIGAMVFNDIIIHPINILGLIINIIGSIWYSFLKLT 380

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0008643 "carbohydrate transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

DICTYBASE|DDB_G0276625 DDB_G0276625 "TPT transporter family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 217 (81.4 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 69/294 (23%), Positives = 126/294 (42%)

Query:    84 AYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLXXXXXXXXXXXSVEKLNWKLIK 143
             AY ++S S+T  NK VL+ Y FN   SL   Q + S             S    N  L K
Sbjct:    19 AYGVTSVSITFFNKAVLNYYGFNFSNSLTLGQMIFSLFFLVTMKTFGYISYPDFNLDLCK 78

Query:   144 LWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMF 203
                 ++L+FI M++SG+ +L   N+ + + L+ ++ ++  VGE ++  K        ++ 
Sbjct:    79 KLASLSLLFILMVISGLAALAKTNVPLFSALRRLSTLIVIVGEGFLLGKVTPTDEVQSVV 138

Query:   204 LMIISAVSGSITDLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGXXXXXXXX 263
             +M++ A+   + D +FD  G  + + NC +TA Y + +      AK+ T+          
Sbjct:   139 VMVLGALIAGLGDATFDFVGSIYILFNCFVTAGYLIYI------AKK-TKETQLNTFGLM 191

Query:   264 XXXXXXXXPFAMFLILIFDEWRYVMNT---GVIELPMFWVAATASGFLGLAISFTSMWFL 320
                     P  + L  I  EW  +      G I     +  ++   FL   +++      
Sbjct:   192 FYCNILSLPATIILTFI-TEWEGISTFEGYGNIGFQFCFFMSSIQAFL---LNYFIFLCS 247

Query:   321 QQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNM-FSILFGLFAGIFFARAK 373
                 P T S+ G +  I  ++ GL +F   +  P + F ++F   A  +++  K
Sbjct:   248 TMNSPLTTSITGQIKSILQTIIGLFMFGDVIITPLLSFGLIFSTLASFWYSYIK 301

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q84L09	GONS2_ARATH	No assigned EC number	0.6771	0.984	0.984	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: AT1G07290 nucleotide-sugar transmembrane transporter; nucleotide-sugar transmembrane transporter; FUNCTIONS IN- nucleotide-sugar transmembrane transporter activity; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- shoot apex, flower, root, seed; EXPRESSED DURING- petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s- Protein of unknown function DUF250 (InterPro-IPR004853); BEST Arabidopsis thaliana protein match is- GONST1 (Golgi Nucleotide Sugar Transporter 1); GDP-mannose transmembrane transporter/ nucleo [...] (375 aa) (Arabidopsis thaliana)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	375
COG5070	309	COG5070, VRG4, Nucleotide-sugar transporter [Carbo	4e-46
TIGR00803	222	TIGR00803, nst, UDP-galactose transporter	1e-09
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	0.004

>gnl|CDD|227402 COG5070, VRG4, Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

 Score =  159 bits (404), Expect = 4e-46
 Identities = 97/308 (31%), Positives = 152/308 (49%), Gaps = 20/308 (6%)

Query: 74  VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVS 133
                L +  +YC SS  MTL NK VLS   FN    L+  Q+L+  + + +  F   V 
Sbjct: 3   KAVSELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE 62

Query: 134 VEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKR 193
                 K    W P++ + + M+ +   SL+Y+ + + TI KN+T IL A GE+  F  R
Sbjct: 63  FRLTKAKK---WFPISFLLVVMIYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGR 119

Query: 194 QNQKVWTAMFLMIISAVSGSITDLSFDTK-------GYAWQIVNCILTASYSLTLRRVMD 246
                  +  LM++S+V  +  D             GY W   NC+ +A++ L +R+ + 
Sbjct: 120 VTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNCLSSAAFVLIMRKRIK 179

Query: 247 KAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATA-S 305
                       +   +  NNLLSLP  +    +F++W          L +  + A   S
Sbjct: 180 LTNFK-------DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLA--NNLSVDSLMAMFIS 230

Query: 306 GFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFA 365
           G   + IS+ S W ++ T  TTYS+VG+LNK+PI+LAGLV F+ P++  ++FSIL G  +
Sbjct: 231 GLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLS 290

Query: 366 GIFFARAK 373
           G  +A AK
Sbjct: 291 GAIYAVAK 298

Length = 309

>gnl|CDD|129885 TIGR00803, nst, UDP-galactose transporter

 Score = 57.4 bits (139), Expect = 1e-09
 Identities = 38/227 (16%), Positives = 69/227 (30%), Gaps = 33/227 (14%)

Query: 166 INIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG--------SITDL 217
           +++ +  I K    +L A+G L    K+  Q    +  LM + ++          S+  L
Sbjct: 2   LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLL 61

Query: 218 SFDT--------------KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMV 263
                              G     ++ +L+A  S     V  +         L +   +
Sbjct: 62  KLGVAIVQMVQSSAKTLMFGNPVVGLSAVLSALLSSGFAGVYFEK-------ILKDGDTM 114

Query: 264 LLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATA---SGFLGLAISFTSMWFL 320
             +  L LP                   +     F    TA    G L +         +
Sbjct: 115 FWSRNLQLPLFGLFSTFSVLLWSDGTL-ISNFGFFIGYPTAVWIVGLLNVGGGLCIGGVV 173

Query: 321 QQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGI 367
           +    TT S V +L+ I  +LA + LF+  +S       +    A  
Sbjct: 174 RYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATF 220

The 10-12 TMS Nucleotide Sugar Transporters (TC 2.A.7.10)Nucleotide-sugar transporters (NSTs) are found in the Golgi apparatus and the endoplasmic reticulum of eukaryotic cells. Members of the family have been sequenced from yeast, protozoans and animals. Animals such as C. elegans possess many of these transporters. Humans have at least two closely related isoforms of the UDP-galactose:UMP exchange transporter.NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids. Length = 222

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 44/210 (20%), Positives = 82/210 (39%), Gaps = 18/210 (8%)

Query: 161 YSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAV-SGSITDLSF 219
            ++K + +    +L  +  +   +    M ++R  + V  A  L +  AV   S  +LS 
Sbjct: 66  VAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSI 125

Query: 220 DTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLIL 279
           +  G    + + I  A  ++  +R++ K              + LL  LL LPFA FL  
Sbjct: 126 NPAGLLLGLGSGISFALGTVLYKRLVKKEGPELL--QFTGWVL-LLGALLLLPFAWFLGP 182

Query: 280 IFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWF--LQQTGPTTYSLVGSLNKI 337
                          L + W A    G +G A+++  +W   L    P+  S++     +
Sbjct: 183 NPQ-----------ALSLQWGALLYLGLIGTALAY-FLWNKGLTLVDPSAASILALAEPL 230

Query: 338 PISLAGLVLFNVPLSVPNMFSILFGLFAGI 367
              L GL++    LS+P +      + A +
Sbjct: 231 VALLLGLLILGETLSLPQLIGGALIIAAVL 260

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	375
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	100.0
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	100.0
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	100.0
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	100.0
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	99.97
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	99.97
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.97
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.97
PLN00411	358	nodulin MtN21 family protein; Provisional	99.96
PRK11272	292	putative DMT superfamily transporter inner membran	99.95
PRK11689	295	aromatic amino acid exporter; Provisional	99.95
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.94
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.94
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.94
PRK15430	296	putative chloramphenical resistance permease RarD;	99.93
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.88
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.87
KOG1580	337	consensus UDP-galactose transporter related protei	99.87
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.86
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.85
KOG1581	327	consensus UDP-galactose transporter related protei	99.82
KOG1582	367	consensus UDP-galactose transporter related protei	99.79
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	99.79
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.78
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.75
COG2962	293	RarD Predicted permeases [General function predict	99.74
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	99.71
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.7
KOG2765	416	consensus Predicted membrane protein [Function unk	99.69
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.66
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.61
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.58
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	99.27
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.22
COG2510	140	Predicted membrane protein [Function unknown]	99.09
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.06
KOG2766	336	consensus Predicted membrane protein [Function unk	99.03
PF13536	113	EmrE: Multidrug resistance efflux transporter	99.02
COG2510	140	Predicted membrane protein [Function unknown]	99.01
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.97
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.97
PRK15430	296	putative chloramphenical resistance permease RarD;	98.75
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.74
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.73
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.61
PLN00411	358	nodulin MtN21 family protein; Provisional	98.45
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.42
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.37
PRK11272	292	putative DMT superfamily transporter inner membran	98.36
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.26
COG2962	293	RarD Predicted permeases [General function predict	98.24
PRK11689	295	aromatic amino acid exporter; Provisional	98.24
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.14
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.08
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.07
PRK13499	345	rhamnose-proton symporter; Provisional	98.04
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.96
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	97.96
PF13536	113	EmrE: Multidrug resistance efflux transporter	97.86
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.77
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.74
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.72
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	97.69
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.59
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.58
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.54
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.5
COG2076	106	EmrE Membrane transporters of cations and cationic	97.48
PRK11431	105	multidrug efflux system protein; Provisional	97.46
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	97.36
KOG2922	335	consensus Uncharacterized conserved protein [Funct	97.29
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.21
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	97.08
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.9
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.74
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.74
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.62
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	96.55
COG2076	106	EmrE Membrane transporters of cations and cationic	96.48
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	96.34
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.25
PRK11431	105	multidrug efflux system protein; Provisional	96.22
KOG4510	346	consensus Permease of the drug/metabolite transpor	96.05
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.93
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	95.45
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	95.4
PRK13499	345	rhamnose-proton symporter; Provisional	95.26
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	95.22
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	94.77
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	94.51
KOG2765	416	consensus Predicted membrane protein [Function unk	94.45
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	94.34
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	94.28
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	92.82
KOG1581	327	consensus UDP-galactose transporter related protei	92.15
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	89.46
PF07857	254	DUF1632: CEO family (DUF1632); InterPro: IPR012435	89.15
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	88.69
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	86.52
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	86.4
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	84.26
KOG1580	337	consensus UDP-galactose transporter related protei	80.19

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=100.00  E-value=1.2e-38  Score=303.87  Aligned_cols=296  Identities=12%  Similarity=0.195  Sum_probs=248.0

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccC--HHHHHHHHHHHHH
Q 044951           74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLN--WKLIKLWIPVNLI  151 (375)
Q Consensus        74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  151 (375)
                      ...+....++.|+..|+..++.||++++  .+|+|++++++|++++.+++.+++..+..+.++.+  +++++.++|+|++
T Consensus        46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~--~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~llp~gl~  123 (350)
T PTZ00343         46 FKWKLALLFLTWYALNVLYVVDNKLALN--MLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLFLKNFLPQGLC  123 (350)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHH--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHH
Confidence            4567778899999999999999999998  57889999999999998776665554444444443  4578899999999


Q ss_pred             HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHHHHH
Q 044951          152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNC  231 (375)
Q Consensus       152 ~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~  231 (375)
                      +.......+.|++++++++++++|+++|+|+++++++++|||++++++++++++++|+++++.+|.++++.|++++++|+
T Consensus       124 ~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l~s~  203 (350)
T PTZ00343        124 HLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAMLSN  203 (350)
T ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHHHHH
Confidence            88777778899999999999999999999999999999999999999999999999999999888889999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhh--HhHh-----cCcchhhHHHHHHHH
Q 044951          232 ILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWR--YVMN-----TGVIELPMFWVAATA  304 (375)
Q Consensus       232 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~-----~~~~~~~~~~~~l~~  304 (375)
                      +++|+|+++.||.+++.+.  +..++++.+...++.+.+.++.+|+....|+..  ...+     ...+.....+..++.
T Consensus       204 ~~~a~~~i~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~~  281 (350)
T PTZ00343        204 LGSSLRSIFAKKTMKNKSE--IGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIFF  281 (350)
T ss_pred             HHHHHHHHHHHHHhccccc--ccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHHH
Confidence            9999999999998865321  112466666777778888888888876554322  1110     111112233345667


Q ss_pred             HhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951          305 SGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK  373 (375)
Q Consensus       305 ~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k  373 (375)
                      +++..+..|.+.|.+++++||.++++.+++||++++++|+++|||++++.+++|.++++.|+++|++.|
T Consensus       282 s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~k  350 (350)
T PTZ00343        282 SGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLFK  350 (350)
T ss_pred             HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhcC
Confidence            788888999999999999999999999999999999999999999999999999999999999999876

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.8e-39  Score=291.54  Aligned_cols=294  Identities=40%  Similarity=0.705  Sum_probs=270.5

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHH
Q 044951           74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFI  153 (375)
Q Consensus        74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (375)
                      .....+.+++.||.+|+.+.+.||+++++|+||..+++...|++.+.+.+..+...|..+.++++|+..|+|+|+++++.
T Consensus         9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~   88 (314)
T KOG1444|consen    9 KQSSPLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFV   88 (314)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHH
Confidence            34556788999999999999999999999999887788889999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHHHHHHH
Q 044951          154 GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCIL  233 (375)
Q Consensus       154 ~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~  233 (375)
                      ++++++..+++|+|+++++++|+.+|+++++.+.+++|.++++..|.++..+.+|.......|.+++..|+.|++.+.++
T Consensus        89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n~~~  168 (314)
T KOG1444|consen   89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALANCLT  168 (314)
T ss_pred             HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHh-HhcCcchhhHHHHHHHHHhHHHHHH
Q 044951          234 TASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYV-MNTGVIELPMFWVAATASGFLGLAI  312 (375)
Q Consensus       234 ~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~  312 (375)
                      .+.+.+..||..+.       .+++.+++++|+++++.|.+....+++||+... .+++.|..+.+|..+..+|++++++
T Consensus       169 ~a~~~v~~kk~vd~-------~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~i  241 (314)
T KOG1444|consen  169 TAAFVVYVKKSVDS-------ANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGI  241 (314)
T ss_pred             HHHHHHHHHHhhcc-------ccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHH
Confidence            99999999997654       468999999999999999999999999998832 3445677788889999999999999


Q ss_pred             HHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951          313 SFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM  374 (375)
Q Consensus       313 ~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~  374 (375)
                      +|+.+++.+.+|++|.+++|......+.+.+.+++|+++++.+++|+.+.+.|.++|++.|.
T Consensus       242 sy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~  303 (314)
T KOG1444|consen  242 SYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATF  303 (314)
T ss_pred             HHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhh
Confidence            99999999999999999999666666666666667899999999999999999999999874

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=100.00  E-value=3.1e-40  Score=303.42  Aligned_cols=295  Identities=19%  Similarity=0.337  Sum_probs=260.4

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccC-HHHHHHHHHHHHHH
Q 044951           74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLN-WKLIKLWIPVNLIF  152 (375)
Q Consensus        74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  152 (375)
                      +..........|+.++++..++||++++.++||+|++++..|..++.+.....+..+..+.++.+ +..++.++|+|+++
T Consensus        14 ~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~~~~~~~~~llpl~~~~   93 (316)
T KOG1441|consen   14 KILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKISSKLPLRTLLPLGLVF   93 (316)
T ss_pred             hhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCccccccchHHHHHHHHHH
Confidence            45666777889999999999999999999999999999999999999999888888877666654 45789999999999


Q ss_pred             HHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHHHHHH
Q 044951          153 IGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCI  232 (375)
Q Consensus       153 ~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~  232 (375)
                      ++..+++|.|++++|+|++|++|+++|++++++++++.+|+++++.++++.+++.||.+++.+|.++|+.|++.++++.+
T Consensus        94 ~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~fn~~G~i~a~~s~~  173 (316)
T KOG1441|consen   94 CISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSFNLFGFISAMISNL  173 (316)
T ss_pred             HHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHH-HHHHHhhhhhHh-HhcCcchhhHHHHHHHHHhHHHH
Q 044951          233 LTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAM-FLILIFDEWRYV-MNTGVIELPMFWVAATASGFLGL  310 (375)
Q Consensus       233 ~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~  310 (375)
                      ..++++++.|+.+++.     ..++|+.++++|+.+++...++ |+....++.... .....|.. .++.. ++..++++
T Consensus       174 ~~al~~I~~~~ll~~~-----~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~sv~~f  246 (316)
T KOG1441|consen  174 AFALRNILSKKLLTSK-----GESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFV-TFLIL-LLNSVLAF  246 (316)
T ss_pred             HHHHHHHHHHHhhhcc-----ccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccch-hhHHH-HHHHHHHH
Confidence            9999999999998642     3579999999999999999998 776654443320 01112222 23333 44449999


Q ss_pred             HHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcccC
Q 044951          311 AISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS  375 (375)
Q Consensus       311 ~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~~  375 (375)
                      .+|.+.|++++++||+|+++.|++|.++.++.||++|+++.++.|..|++++++|+++|++.|.|
T Consensus       247 ~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~  311 (316)
T KOG1441|consen  247 LLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLK  311 (316)
T ss_pred             HHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999999999999999999999999999999999999999998864

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=100.00  E-value=1.9e-37  Score=291.03  Aligned_cols=289  Identities=15%  Similarity=0.206  Sum_probs=241.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHH
Q 044951           78 PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLV  157 (375)
Q Consensus        78 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (375)
                      .....+.|+..|++++++||++++  +|++|++++++|+.++.+.+.+.+..+..+.++.++++++.+++.|+++++++.
T Consensus         3 ~~~~~~~w~~~~~~~~~~NK~~l~--~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~   80 (302)
T TIGR00817         3 TGLLFGLWYFLNVYFNIYNKKLLN--VFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAIVHTIGHV   80 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHh--hCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            345678999999999999999998  578899999999999988777664434345566788999999999999999999


Q ss_pred             HHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHHHHHHHHHHH
Q 044951          158 SGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNCILTASY  237 (375)
Q Consensus       158 ~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~  237 (375)
                      ++|.+++++++++++++++++|+++++++++++|||++++++++++++++|+++...+|.+++..|+++++++++++|+|
T Consensus        81 ~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~~~a~~  160 (302)
T TIGR00817        81 TSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNITFVSR  160 (302)
T ss_pred             HHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999887777778888999999999999999


Q ss_pred             HHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhH-hcCc----chhhHHHHHHHHHhH-HHHH
Q 044951          238 SLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVM-NTGV----IELPMFWVAATASGF-LGLA  311 (375)
Q Consensus       238 ~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~----~~~~~~~~~l~~~~~-~~~~  311 (375)
                      .++.||.+++       .++++.++..|+...+.+.++|.....++..... +...    ......+...+..++ ....
T Consensus       161 ~v~~k~~~~~-------~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (302)
T TIGR00817       161 NIFSKKAMTI-------KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHF  233 (302)
T ss_pred             HHHHHHhhcc-------CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHH
Confidence            9999997652       1478899999999999988888876655433211 1101    111122332334443 2333


Q ss_pred             HHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcccC
Q 044951          312 ISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS  375 (375)
Q Consensus       312 ~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~~  375 (375)
                      .++..+..++++||+++++.+++||++++++|++++||+++..+++|.++++.|+.+|++.|.|
T Consensus       234 ~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~  297 (302)
T TIGR00817       234 YQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQ  297 (302)
T ss_pred             HHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhcc
Confidence            4556668999999999999999999999999999999999999999999999999999988753

specificities overlap.

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=99.97  E-value=2.8e-31  Score=224.95  Aligned_cols=285  Identities=34%  Similarity=0.613  Sum_probs=251.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHH
Q 044951           78 PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLV  157 (375)
Q Consensus        78 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (375)
                      ...+++.||.+|+.+.+.||++++..+|+..+.+.++|.+++...+.+++..|..+.+   ..+.|.|+|.+++...+++
T Consensus         7 ~~~~~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~fR---~t~aK~WfpiSfLLv~MIy   83 (309)
T COG5070           7 ELTASLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVEFR---LTKAKKWFPISFLLVVMIY   83 (309)
T ss_pred             cchHHHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhhee---hhhhhhhcCHHHHHHHHHH
Confidence            3567889999999999999999999999988999999999988888887777655443   4568899999999999999


Q ss_pred             HHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc--------ccchhhHHHHHH
Q 044951          158 SGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL--------SFDTKGYAWQIV  229 (375)
Q Consensus       158 ~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~  229 (375)
                      .+..+++|++++.|++.|+++.+.++..+..++|.|.+..+..+.+++++..+...++|.        .++ .|++|+..
T Consensus        84 t~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm~~  162 (309)
T COG5070          84 TSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWMFT  162 (309)
T ss_pred             hcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEEeh
Confidence            999999999999999999999999999999999999999999999999999999999886        344 69999999


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHH
Q 044951          230 NCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLG  309 (375)
Q Consensus       230 s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  309 (375)
                      +++..|.|....||..+-       .+...++.+||+++.+.|.++.+++++|||....-...+. +.....+..+|+++
T Consensus       163 NclssaafVL~mrkri~l-------tNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~-~d~l~am~ISgl~s  234 (309)
T COG5070         163 NCLSSAAFVLIMRKRIKL-------TNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLS-VDSLMAMFISGLCS  234 (309)
T ss_pred             hhHhHHHHHHHHHHhhcc-------cccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCC-hHHHHHHHHHHHHH
Confidence            999999999998886553       2355678999999999999999999999987642112221 11134678899999


Q ss_pred             HHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951          310 LAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM  374 (375)
Q Consensus       310 ~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~  374 (375)
                      +.+.|++-|+++.+|+++++++|.+++....+.|.++||++.+...+..+.+...+.+.|.+.|.
T Consensus       235 vgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks  299 (309)
T COG5070         235 VGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKS  299 (309)
T ss_pred             hhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999998764

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=1.2e-32  Score=239.94  Aligned_cols=292  Identities=18%  Similarity=0.300  Sum_probs=258.8

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhc--cCCChhHHHHHHHHHHHHHHHHHHHhh-----CCccccc--cCHHHHHHHH
Q 044951           76 SGPLISGTAYCISSCSMTLLNKVVLST--YNFNAGISLMFYQNLISTLVVAVFGFF-----GAVSVEK--LNWKLIKLWI  146 (375)
Q Consensus        76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~--~~f~~p~~l~~~q~~~~~l~l~~~~~~-----~~~~~~~--~~~~~~~~~~  146 (375)
                      .........|..+|+++.+.||++++.  ...+.|.+.++.|++++..++..+...     +..+.++  ++.+..+.++
T Consensus        27 ~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vl  106 (347)
T KOG1442|consen   27 KQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVL  106 (347)
T ss_pred             hchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhc
Confidence            334455667888999999999999997  456789999999999998888776543     2223333  4567888999


Q ss_pred             HHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc---cccchhh
Q 044951          147 PVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD---LSFDTKG  223 (375)
Q Consensus       147 ~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G  223 (375)
                      |+++.+.+++.+.|.+++|+++++|.+-|+++.+|+.++.++++|||-+.....++.+++.|-.+.+-.|   ..+++.|
T Consensus       107 plsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~~G  186 (347)
T KOG1442|consen  107 PLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSWIG  186 (347)
T ss_pred             chhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccchhh
Confidence            9999999999999999999999999999999999999999999999999999999988888866655444   4677999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHH
Q 044951          224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAAT  303 (375)
Q Consensus       224 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  303 (375)
                      .++++.|+++.|+..+..||.....+       ---|.+.+|+|..+....+|+.++.+|.+.+.++++.....||..+.
T Consensus       187 vifGVlaSl~vAlnaiytkk~l~~v~-------~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mt  259 (347)
T KOG1442|consen  187 VIFGVLASLAVALNAIYTKKVLPPVG-------DCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMT  259 (347)
T ss_pred             hHHHHHHHHHHHHHHHhhheeccccc-------CeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHH
Confidence            99999999999999999998766432       34789999999999999999999999999998888888889999999


Q ss_pred             HHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951          304 ASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM  374 (375)
Q Consensus       304 ~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~  374 (375)
                      .+|+++|.++|.+.+-+|.+||.|+.+.++-|....+++++.+++|..+..-|.|-+++++|..+|.+.|.
T Consensus       260 LsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~  330 (347)
T KOG1442|consen  260 LSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKE  330 (347)
T ss_pred             HHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999875

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.97  E-value=3.4e-28  Score=228.18  Aligned_cols=274  Identities=19%  Similarity=0.260  Sum_probs=229.1

Q ss_pred             HHHHHHHHhhc-cCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhH
Q 044951           92 MTLLNKVVLST-YNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAM  170 (375)
Q Consensus        92 ~~~~nK~~l~~-~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~  170 (375)
                      ..++.+.+... ++.++|.++++.|+++..+..........  .++.++..++.+.+.++++.+...++|.|++|+|+++
T Consensus        15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~i~~p~   92 (303)
T PF08449_consen   15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK--FPKSRKIPLKKYAILSFLFFLASVLSNAALKYISYPT   92 (303)
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc--ccCCCcChHHHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence            34555555554 33347999999999998887766544432  2233445577889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc----ccc------hhhHHHHHHHHHHHHHHHHH
Q 044951          171 VTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL----SFD------TKGYAWQIVNCILTASYSLT  240 (375)
Q Consensus       171 ~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~----~~~------~~G~~~~l~s~~~~a~~~i~  240 (375)
                      .++.|++.|+++++++.+++|||++++++++++++++|+++...+|.    +.+      ..|+++.+.+.++.|.+.++
T Consensus        93 ~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~~~~  172 (303)
T PF08449_consen   93 QIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFTGVY  172 (303)
T ss_pred             HHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999877542    111      23999999999999999999


Q ss_pred             HHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHH--hhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHHH
Q 044951          241 LRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILI--FDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMW  318 (375)
Q Consensus       241 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  318 (375)
                      .+|.+++++       .+++++++|+++++.+..++....  .+|+.+..++.. .+|..+..++..++++.......+.
T Consensus       173 qe~~~~~~~-------~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~-~~p~~~~~l~~~s~~~~~g~~~i~~  244 (303)
T PF08449_consen  173 QEKLFKKYG-------KSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFIS-AHPSVLLYLLLFSLTGALGQFFIFY  244 (303)
T ss_pred             HHHHHHHhC-------CcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999988754       678999999999999999887777  566655443322 3444566777888888888888888


Q ss_pred             HhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcccC
Q 044951          319 FLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKMS  375 (375)
Q Consensus       319 ~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~~  375 (375)
                      .+++.||++.+++.+++++.++++++++||+++++.+++|+++++.|..+|++.|+|
T Consensus       245 ~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k  301 (303)
T PF08449_consen  245 LIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK  301 (303)
T ss_pred             HHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence            999999999999999999999999999999999999999999999999999998864

; GO: 0055085 transmembrane transport

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.97  E-value=1.1e-29  Score=225.26  Aligned_cols=289  Identities=14%  Similarity=0.174  Sum_probs=244.1

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhC----CccccccCHH-HHHHHHHHHHH
Q 044951           77 GPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFG----AVSVEKLNWK-LIKLWIPVNLI  151 (375)
Q Consensus        77 ~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~  151 (375)
                      ..+..+.+|+.+|+++..++|+.-.  +|++|++++..|+++-.++....+...    .+++...+|+ ++++..|+++.
T Consensus        16 ~~L~lVl~yY~~Si~Ltf~~~~~~~--~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtala   93 (349)
T KOG1443|consen   16 LTLALVLLYYFLSIGLTFYFKWLTK--NFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALA   93 (349)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhc--CcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhh
Confidence            3344558999999999999998865  678889999999988777665544331    1123345554 78888999999


Q ss_pred             HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHHHHH
Q 044951          152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQIVNC  231 (375)
Q Consensus       152 ~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~  231 (375)
                      .+++++++|+|++|+++++|||.|+++++|+.+++.++.-||++|...+.++++.+|+++.++.+.+++..|+.+.++++
T Consensus        94 ta~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf~i~Gf~lv~~aS  173 (349)
T KOG1443|consen   94 TALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQFNIEGFFLVLAAS  173 (349)
T ss_pred             hhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccceeehhHHHHHHHH
Confidence            99999999999999999999999999999999999888889999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHh-----HhcCcch-hhHHHHHHHHH
Q 044951          232 ILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYV-----MNTGVIE-LPMFWVAATAS  305 (375)
Q Consensus       232 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~-~~~~~~~l~~~  305 (375)
                      ++.+++..+.+.++++.+    ..+-||..+.++..+.+...++|..+.+|+....     ..+.+.. .......+...
T Consensus       174 ~~sGlRW~~tQ~ll~~~~----~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l~  249 (349)
T KOG1443|consen  174 LLSGLRWAFTQMLLRNQP----SAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISLG  249 (349)
T ss_pred             HhhhhhHHHHHHHHhcCc----cccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHHH
Confidence            999999999999887643    3567999999999999999999988877764332     1111111 11223466778


Q ss_pred             hHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951          306 GFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR  371 (375)
Q Consensus       306 ~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~  371 (375)
                      |..++++.++.|..+.++|..|.++.|.+|.+.+.++|.++.+|.++..++.|..+++.|+..|..
T Consensus       250 g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  250 GLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhcc
Confidence            889999999999999999999999999999999999999999999999999999999999999943

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.96  E-value=8.8e-26  Score=214.80  Aligned_cols=279  Identities=15%  Similarity=0.177  Sum_probs=204.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCC--ccccccCHHHHHHHHHHHHHHHHHHHHH
Q 044951           82 GTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGA--VSVEKLNWKLIKLWIPVNLIFIGMLVSG  159 (375)
Q Consensus        82 ~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (375)
                      .++--....++..+.|..++. +.+ |..+.++|+.++.+++.++...+.  .+.++.+++++..+...|++..++..+.
T Consensus        18 ~~~~q~~~~~~~~~~k~a~~~-G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~l~l~g~~g~~~~~~~   95 (358)
T PLN00411         18 MLATETSVVGISTLFKVATSK-GLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSKIGLLGFLGSMYVITG   95 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHHC-CCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHHHHHHH
Confidence            333333444446788999964 788 888999999999888776543321  2233445677777777777666677789


Q ss_pred             hHhhcccchhHHHHHHHHHHHHHHHHHHHH------hcccccHHHHHHHHHHHHHhHhhccc-cc---------------
Q 044951          160 MYSLKYINIAMVTILKNMTNILTAVGELYM------FRKRQNQKVWTAMFLMIISAVSGSIT-DL---------------  217 (375)
Q Consensus       160 ~~al~~~~vs~~~il~~~~pvfv~l~~~~~------~~~~~~~~~~~~l~l~~~Gv~l~~~~-~~---------------  217 (375)
                      +.+++|++++.+.++.++.|++++++++++      +|||++++++++++++++|+.++... +.               
T Consensus        96 ~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~  175 (358)
T PLN00411         96 YIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQ  175 (358)
T ss_pred             HHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccc
Confidence            999999999999999999999999999999      69999999999999999999986542 11               


Q ss_pred             --------ccc-hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCc-hhHHHHHhhhHHHHHHHHHHHhhhhhHh
Q 044951          218 --------SFD-TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNE-VSMVLLNNLLSLPFAMFLILIFDEWRYV  287 (375)
Q Consensus       218 --------~~~-~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~  287 (375)
                              ..+ ..|..+.++++++||+|.++.||..++         .++ ....+++..++.....+.....++.+..
T Consensus       176 ~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~---------~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~  246 (358)
T PLN00411        176 LSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSE---------YPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPS  246 (358)
T ss_pred             cccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------cCcHhHHHHHHHHHHHHHHHHHHHHHccCCcc
Confidence                    012 349999999999999999999998764         333 2444454444444433333333321100


Q ss_pred             HhcCcchhhHHHHHHHHHhHHHHHHHHH-HHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhh
Q 044951          288 MNTGVIELPMFWVAATASGFLGLAISFT-SMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAG  366 (375)
Q Consensus       288 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~  366 (375)
                      .....++ ... ..+++.+++.. +.|. .++++++.+|.++++..+++|++++++|++++||++++.+++|.++++.|+
T Consensus       247 ~~~~~~~-~~~-~~i~y~~i~t~-lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv  323 (358)
T PLN00411        247 VWIIHFD-ITL-ITIVTMAIITS-VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGF  323 (358)
T ss_pred             cceeccc-hHH-HHHHHHHHHHH-HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHH
Confidence            0011121 222 24566666654 4444 448999999999999999999999999999999999999999999999999


Q ss_pred             Hhhhhccc
Q 044951          367 IFFARAKM  374 (375)
Q Consensus       367 ~ly~~~k~  374 (375)
                      ++..+.|+
T Consensus       324 ~l~~~~~~  331 (358)
T PLN00411        324 YAVMWGKA  331 (358)
T ss_pred             HHHHhhhh
Confidence            99876654

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.95  E-value=4.5e-25  Score=206.06  Aligned_cols=271  Identities=12%  Similarity=0.045  Sum_probs=209.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHH-HHHHH
Q 044951           79 LISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIF-IGMLV  157 (375)
Q Consensus        79 ~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  157 (375)
                      +...++|+..    ....|...+  +.+ |..++++|++++.+++.++...+..+  ..++++++.....|.+. .....
T Consensus        14 ~~~~~iWg~~----~~~~K~~~~--~~~-p~~~~~~R~~~a~l~ll~~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~   84 (292)
T PRK11272         14 FALYIIWGST----YLVIRIGVE--SWP-PLMMAGVRFLIAGILLLAFLLLRGHP--LPTLRQWLNAALIGLLLLAVGNG   84 (292)
T ss_pred             HHHHHHHhhH----HHHHHHHhc--cCC-HHHHHHHHHHHHHHHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHH
Confidence            4456688877    556698887  567 89999999999988876654443222  23466677777777654 56677


Q ss_pred             HHhHhh-cccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc-ccccchhhHHHHHHHHHHHH
Q 044951          158 SGMYSL-KYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT-DLSFDTKGYAWQIVNCILTA  235 (375)
Q Consensus       158 ~~~~al-~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~a  235 (375)
                      +.+.+. ++++++.++++.++.|+++++++.+ +|||++++++.+++++++|+.++..+ +.+.+..|.++++++++++|
T Consensus        85 ~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~a  163 (292)
T PRK11272         85 MVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASWA  163 (292)
T ss_pred             HHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHHH
Confidence            778888 9999999999999999999999975 79999999999999999999988644 33455679999999999999


Q ss_pred             HHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHH
Q 044951          236 SYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFT  315 (375)
Q Consensus       236 ~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  315 (375)
                      .|.+..||..+          -++.....++...+.+.+.+.....++...     ...+...|..+++.++++....+.
T Consensus       164 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~l~i~~s~~~~~  228 (292)
T PRK11272        164 FGSVWSSRLPL----------PVGMMAGAAEMLAAGVVLLIASLLSGERLT-----ALPTLSGFLALGYLAVFGSIIAIS  228 (292)
T ss_pred             HHHHHHHhcCC----------CcchHHHHHHHHHHHHHHHHHHHHcCCccc-----ccCCHHHHHHHHHHHHHHHHHHHH
Confidence            99999988532          123344556666666666555443322111     111234567788888888777776


Q ss_pred             HH-HHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951          316 SM-WFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM  374 (375)
Q Consensus       316 ~~-~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~  374 (375)
                      .+ +.+++.++.+.++..+++|+.++++|++++||++++.+++|.++++.|+++.++.+.
T Consensus       229 l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        229 AYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            65 799999999999999999999999999999999999999999999999998776543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.95  E-value=7.7e-25  Score=204.72  Aligned_cols=265  Identities=11%  Similarity=0.035  Sum_probs=192.3

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHH
Q 044951           75 KSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIG  154 (375)
Q Consensus        75 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (375)
                      ....+.++++|+..    ....|..++  ++| |..+.++|+.++.+++..+..  .   ++.+++.++..+..++.+..
T Consensus         6 ~l~~l~a~~~Wg~~----~~~~k~~~~--~~~-P~~~~~~R~~~a~l~l~~~~~--~---~~~~~~~~~~~~~~~l~~~~   73 (295)
T PRK11689          6 TLIGLIAILLWSTM----VGLIRGVSE--SLG-PVGGAAMIYSVSGLLLLLTVG--F---PRLRQFPKRYLLAGGLLFVS   73 (295)
T ss_pred             hHHHHHHHHHHHHH----HHHHHHHHc--cCC-hHHHHHHHHHHHHHHHHHHcc--c---cccccccHHHHHHHhHHHHH
Confidence            45566788899988    557799887  578 999999999999888765431  1   11122223334444455566


Q ss_pred             HHHHHhHhhc----ccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc-----------cc
Q 044951          155 MLVSGMYSLK----YINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL-----------SF  219 (375)
Q Consensus       155 ~~~~~~~al~----~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~-----------~~  219 (375)
                      +..+.+.+++    .++.+.+.++.++.|+++++++++++|||++++++++++++++|++++...+.           ..
T Consensus        74 ~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~  153 (295)
T PRK11689         74 YEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIAS  153 (295)
T ss_pred             HHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhcccc
Confidence            6666666664    46778888999999999999999999999999999999999999998865432           12


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHH
Q 044951          220 DTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFW  299 (375)
Q Consensus       220 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  299 (375)
                      +..|+++++.++++||.|.++.||..++         .++....+   ..+...+.+.....+++.     ..+ ++..|
T Consensus       154 ~~~G~~~~l~aa~~~A~~~v~~k~~~~~---------~~~~~~~~---~~~~~~l~~~~~~~~~~~-----~~~-~~~~~  215 (295)
T PRK11689        154 NPLSYGLAFIGAFIWAAYCNVTRKYARG---------KNGITLFF---ILTALALWIKYFLSPQPA-----MVF-SLPAI  215 (295)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhhccCC---------CCchhHHH---HHHHHHHHHHHHHhcCcc-----ccC-CHHHH
Confidence            3469999999999999999999997432         44444322   122222222222222211     112 22345


Q ss_pred             HHHHHHhHHHHHHHHH-HHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951          300 VAATASGFLGLAISFT-SMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       300 ~~l~~~~~~~~~~~~~-~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                      ..+++.++. ..+.|. .++.+++.+|.+.++..+++|++++++|++++||++++.+++|.++++.|+++..
T Consensus       216 ~~l~~~~~~-t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~  286 (295)
T PRK11689        216 IKLLLAAAA-MGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCW  286 (295)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence            556666654 444444 4589999999999999999999999999999999999999999999999986643

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.94  E-value=4.1e-24  Score=200.29  Aligned_cols=274  Identities=12%  Similarity=0.104  Sum_probs=199.5

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHH-HH
Q 044951           76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIF-IG  154 (375)
Q Consensus        76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  154 (375)
                      ...+...++|+...    ...|..++  +++ |..+.++|+.++.+.+......     ++.++   +..+..++.. ..
T Consensus         7 l~~l~~~~~Wg~~~----~~~k~~~~--~~~-p~~~~~~R~~~a~~~l~~~~~~-----~~~~~---~~~~~~g~~~~~~   71 (299)
T PRK11453          7 VLALLVVVVWGLNF----VVIKVGLH--NMP-PLMLAGLRFMLVAFPAIFFVAR-----PKVPL---NLLLGYGLTISFG   71 (299)
T ss_pred             HHHHHHHHHHhhhH----HHHHHHHh--cCC-HHHHHHHHHHHHHHHHHHHhcC-----CCCch---HHHHHHHHHHHHH
Confidence            34566777899884    56698887  577 9999999999876655443221     11122   2344445433 34


Q ss_pred             HHHHHhHhhcc-cchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc---cccchhhHHHHHHH
Q 044951          155 MLVSGMYSLKY-INIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD---LSFDTKGYAWQIVN  230 (375)
Q Consensus       155 ~~~~~~~al~~-~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s  230 (375)
                      ...+.+.++++ ++++.+.++.++.|+++.+++++++|||+++++++++++.++|+.++...+   .+.+..|+.+++.+
T Consensus        72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l~l~a  151 (299)
T PRK11453         72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFMLTLAA  151 (299)
T ss_pred             HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHHHHHH
Confidence            44566778887 689999999999999999999999999999999999999999999887542   23345799999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHh-HhcCcchhhHHHHHHHHHhHHH
Q 044951          231 CILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYV-MNTGVIELPMFWVAATASGFLG  309 (375)
Q Consensus       231 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~  309 (375)
                      ++++|+|.++.||..++.      ..........++...+...........++.... .....+ ++..|..+++.|+++
T Consensus       152 al~~a~~~v~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~i~~  224 (299)
T PRK11453        152 AFSWACGNIFNKKIMSHS------TRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTI-DMTTILSLMYLAFVA  224 (299)
T ss_pred             HHHHHHHHHHHHHHhccc------CccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccC-CHHHHHHHHHHHHHH
Confidence            999999999999975421      112222333444433332222222222322111 011122 344577889999999


Q ss_pred             HHHHHHHH-HHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951          310 LAISFTSM-WFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR  371 (375)
Q Consensus       310 ~~~~~~~~-~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~  371 (375)
                      ....|..+ +.+++.++.+.++...++|++++++|++++||+++..+++|.++++.|+++-.+
T Consensus       225 t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~  287 (299)
T PRK11453        225 TIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF  287 (299)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence            98888876 789999999999999999999999999999999999999999999999987544

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.94  E-value=3.1e-24  Score=197.03  Aligned_cols=250  Identities=16%  Similarity=0.124  Sum_probs=196.9

Q ss_pred             HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHH-HHHHHHHHHHhHhhcccchhHH
Q 044951           93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVN-LIFIGMLVSGMYSLKYINIAMV  171 (375)
Q Consensus        93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~al~~~~vs~~  171 (375)
                      ....|+.+++ ..| |..+.+.|++.+.+++.+....+      .++++++.....+ +...++..+.+.|++++|++.+
T Consensus         5 ~~~~k~~~~~-~~~-~~~~~~~r~~~~~l~l~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~   76 (260)
T TIGR00950         5 GVVIGQYLEG-QVP-LYFAVFRRLIFALLLLLPLLRRR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEA   76 (260)
T ss_pred             HHHHHHHHhc-CCC-HHHHHHHHHHHHHHHHHHHHHhc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhh
Confidence            4567999874 345 88899999998887776554333      1344444455555 5568889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc-ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 044951          172 TILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT-DLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQ  250 (375)
Q Consensus       172 ~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~  250 (375)
                      +++.++.|+++++++.+++|||++++++.++.++++|+.++... +.+.+..|+.+++.++++++.+.+..||..++   
T Consensus        77 ~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~---  153 (260)
T TIGR00950        77 ALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKK---  153 (260)
T ss_pred             HHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhhc---
Confidence            99999999999999999999999999999999999999987654 34455789999999999999999999998653   


Q ss_pred             hccCCCCCc--hhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHH-HHhhccCchh
Q 044951          251 ATRSGSLNE--VSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSM-WFLQQTGPTT  327 (375)
Q Consensus       251 ~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~l~~~s~~t  327 (375)
                            .++  .....+....+.+..++.....++..      .. +...|..+++.++++..+.+..+ +.+++.++.+
T Consensus       154 ------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~  220 (260)
T TIGR00950       154 ------EGPELLQFTGWVLLLGALLLLPFAWFLGPNP------QA-LSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSA  220 (260)
T ss_pred             ------CCchHHHHHHHHHHHHHHHHHHHHHhcCCCC------Cc-chHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchH
Confidence                  343  33333456666666666554433211      11 23345567778888776666654 7999999999


Q ss_pred             HhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhh
Q 044951          328 YSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAG  366 (375)
Q Consensus       328 ~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~  366 (375)
                      .++..+++|+++++++++++||++++.+++|..+++.|+
T Consensus       221 ~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       221 ASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            999999999999999999999999999999999999886

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.94  E-value=1.6e-23  Score=195.59  Aligned_cols=267  Identities=12%  Similarity=0.018  Sum_probs=202.7

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHH
Q 044951           74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFI  153 (375)
Q Consensus        74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (375)
                      +....+.+.++|+..+    ...|+.++  ++| |..+.++|++++.+++.++...+   .++.++++++..+..|+++.
T Consensus        13 ~~~~~~la~~~~~~~~----~~~K~~~~--~~~-~~~~~~~R~~~a~l~l~~~~~~~---~~~~~~~~~~~~~~~g~~~~   82 (293)
T PRK10532         13 PILLLLIAMASIQSGA----SLAKSLFP--LVG-APGVTALRLALGTLILIAIFKPW---RLRFAKEQRLPLLFYGVSLG   82 (293)
T ss_pred             HHHHHHHHHHHHHhhH----HHHHHHHH--HcC-HHHHHHHHHHHHHHHHHHHHhHH---hccCCHHHHHHHHHHHHHHH
Confidence            3455566777777664    46799998  577 88899999999988876654322   12345677777778888888


Q ss_pred             HHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc---ccccchhhHHHHHHH
Q 044951          154 GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT---DLSFDTKGYAWQIVN  230 (375)
Q Consensus       154 ~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~---~~~~~~~G~~~~l~s  230 (375)
                      ..+.+.+++++++|++.++++..+.|+++++++    +|++...  ..+.++++|+.++...   ..+.+..|.++++++
T Consensus        83 ~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~l~a  156 (293)
T PRK10532         83 GMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVSHVDLTGAALALGA  156 (293)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcccCChHHHHHHHHH
Confidence            888899999999999999999999999999876    3566544  4466779999886532   223456799999999


Q ss_pred             HHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHH
Q 044951          231 CILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGL  310 (375)
Q Consensus       231 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  310 (375)
                      ++++|+|.+..||..++         .++.... +...++...+.++....++  .    ..+ ++..|..+++.|+++.
T Consensus       157 a~~~a~~~v~~r~~~~~---------~~~~~~~-~~~~~~~~~l~~~~~~~~~--~----~~~-~~~~~~~~l~lgv~~t  219 (293)
T PRK10532        157 GACWAIYILSGQRAGAE---------HGPATVA-IGSLIAALIFVPIGALQAG--E----ALW-HWSILPLGLAVAILST  219 (293)
T ss_pred             HHHHHHHHHHHHHHhcc---------CCchHHH-HHHHHHHHHHHHHHHHccC--c----ccC-CHHHHHHHHHHHHHHH
Confidence            99999999999998543         4454443 4445555555554443221  0    011 2233455678889988


Q ss_pred             HHHHHH-HHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951          311 AISFTS-MWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK  373 (375)
Q Consensus       311 ~~~~~~-~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k  373 (375)
                      .+.|.. ++.+++.+|.++++..+++|++++++|++++||+++..+++|.++++.|++.+.+..
T Consensus       220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~  283 (293)
T PRK10532        220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI  283 (293)
T ss_pred             HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence            888866 489999999999999999999999999999999999999999999999999986543

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.93  E-value=1.1e-22  Score=190.29  Aligned_cols=272  Identities=11%  Similarity=0.038  Sum_probs=187.7

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCC-ccc-c-cc-CHHHHHHHHHH
Q 044951           73 AVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGA-VSV-E-KL-NWKLIKLWIPV  148 (375)
Q Consensus        73 ~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~-~~~-~-~~-~~~~~~~~~~~  148 (375)
                      ++....+++.++|+...    ...|.. .  +.+ |..+.++|++++.+++......+. .+. . +. +++.+......
T Consensus         8 ~g~~~~l~a~~~wg~~~----~~~k~~-~--~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (296)
T PRK15430          8 QGVLLALAAYFIWGIAP----AYFKLI-Y--YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVS   79 (296)
T ss_pred             hHHHHHHHHHHHHHHHH----HHHHHh-c--CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHHHHH
Confidence            45566677888898885    455875 3  567 899999999998876654432221 110 0 01 23333333344


Q ss_pred             HHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHHHH
Q 044951          149 NLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAWQI  228 (375)
Q Consensus       149 ~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l  228 (375)
                      ++....++.+.+++++++|++.++++.++.|+++++++++++|||++++++++++++++|++++...+.+.    ..+++
T Consensus        80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l  155 (296)
T PRK15430         80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIAL  155 (296)
T ss_pred             HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHH
Confidence            56678889999999999999999999999999999999999999999999999999999999876432222    25788


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHH
Q 044951          229 VNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFL  308 (375)
Q Consensus       229 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  308 (375)
                      +++++||+|.+..||..++       ...+......+..+++.+...+.   .++...  .... .....+..+...|+.
T Consensus       156 ~aa~~~a~~~i~~r~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~--~~~~-~~~~~~~~~~~~g~~  222 (296)
T PRK15430        156 GLAFSFAFYGLVRKKIAVE-------AQTGMLIETMWLLPVAAIYLFAI---ADSSTS--HMGQ-NPMSLNLLLIAAGIV  222 (296)
T ss_pred             HHHHHHHHHHHHHHhcCCC-------CchhHHHHHHHHHHHHHHHHHHH---ccCCcc--cccC-CcHHHHHHHHHHHHH
Confidence            8999999999988875321       01122222233322222221111   111000  0001 111123344555555


Q ss_pred             HHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951          309 GLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF  369 (375)
Q Consensus       309 ~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly  369 (375)
                      +....+..++.+++.+|.+.++..+++|++++++|++++||++++.+++|+++++.|+.+.
T Consensus       223 t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~  283 (296)
T PRK15430        223 TTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIF  283 (296)
T ss_pred             HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence            4444444558999999999999999999999999999999999999999999998887664

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.88  E-value=2.8e-20  Score=173.78  Aligned_cols=267  Identities=12%  Similarity=0.113  Sum_probs=197.6

Q ss_pred             HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhC--CccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhH
Q 044951           93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFG--AVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAM  170 (375)
Q Consensus        93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~  170 (375)
                      ...+..+-++ +++.|.+-+++-++.-.++.......+  ..+..+.-++.+++++.++++-...+++.+.|++|++++.
T Consensus        29 ~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS  107 (334)
T PF06027_consen   29 GTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRPWWKYFLLALLDVEANYLVVLAYQYTSVTS  107 (334)
T ss_pred             HHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHhhcccHhH
Confidence            3444555444 677787666665554333332222222  1122222334566778889988999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc---------ccchhhHHHHHHHHHHHHHHHHHH
Q 044951          171 VTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL---------SFDTKGYAWQIVNCILTASYSLTL  241 (375)
Q Consensus       171 ~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~---------~~~~~G~~~~l~s~~~~a~~~i~~  241 (375)
                      ++++.+++.+++++++++++|+|+++.+++++++.++|++++...|.         +-...|++++++++++||+++++.
T Consensus       108 ~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~  187 (334)
T PF06027_consen  108 VQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVSNVLE  187 (334)
T ss_pred             HHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998876542         224789999999999999999999


Q ss_pred             HHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHH-HHh
Q 044951          242 RRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSM-WFL  320 (375)
Q Consensus       242 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~l  320 (375)
                      ++..++         .+..+......+++.++..+..... |+....+. +|+... +.. .....++....|+.. ..+
T Consensus       188 E~~v~~---------~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~-~w~~~~-~~~-~v~~~~~lf~~y~l~p~~l  254 (334)
T PF06027_consen  188 EKLVKK---------APRVEFLGMLGLFGFIISGIQLAIL-ERSGIESI-HWTSQV-IGL-LVGYALCLFLFYSLVPIVL  254 (334)
T ss_pred             HHhccc---------CCHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhcc-CCChhh-HHH-HHHHHHHHHHHHHHHHHHH
Confidence            998764         4566777777788877777665544 44443222 343222 222 222223333444433 578


Q ss_pred             hccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951          321 QQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK  373 (375)
Q Consensus       321 ~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k  373 (375)
                      +.+||+...+.-....+.++++++++||+++++..++|.++++.|.++|+...
T Consensus       255 ~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  255 RMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            99999999998888999999999999999999999999999999999998753

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.87  E-value=7e-20  Score=170.15  Aligned_cols=271  Identities=11%  Similarity=0.158  Sum_probs=180.4

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhC--CccccccCHHHHHHHHHHHHHHHHH
Q 044951           78 PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFG--AVSVEKLNWKLIKLWIPVNLIFIGM  155 (375)
Q Consensus        78 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~  155 (375)
                      ++.+...|...    ....|...++   .++  .++++.....+++.++...+  ..+.++.+++.+......++.....
T Consensus         6 ~~~aa~~~a~~----~~~~k~~~~~---~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (281)
T TIGR03340         6 VVFSALMHAGW----NLMAKSHADK---EPD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVY   76 (281)
T ss_pred             HHHHHHHHHHH----HHHHhhcCCc---hhH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHH
Confidence            34455556555    5567866553   223  24555555555554433322  1222333444454455556677888


Q ss_pred             HHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc-cccchhhHHHHHHHHHHH
Q 044951          156 LVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD-LSFDTKGYAWQIVNCILT  234 (375)
Q Consensus       156 ~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~  234 (375)
                      ..+.+.++++.|++..+.+.++.|+++.+++++++|||+++++++++++++.|+.++...+ ...+..|+.+++++++++
T Consensus        77 ~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~  156 (281)
T TIGR03340        77 FLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGT  156 (281)
T ss_pred             HHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999876543 234457889999999999


Q ss_pred             HHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHH
Q 044951          235 ASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISF  314 (375)
Q Consensus       235 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  314 (375)
                      ++|.+..|+..++.+     ...+......+.....   ..+........... . ....... +..+++.+.+...+.|
T Consensus       157 a~~~i~~k~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~-~~~~~~~-~~~~~~~~~~~s~l~~  225 (281)
T TIGR03340       157 AIYSLSDKAAALGVP-----AFYSALGYLGIGFLAM---GWPFLLLYLKRHGR-S-MFPYARQ-ILPSATLGGLMIGGAY  225 (281)
T ss_pred             HHhhhhccccccchh-----cccccHHHHHHHHHHH---HHHHHHHHHHHhcc-c-hhhhHHH-HHHHHHHHHHHHHHHH
Confidence            999998887533211     0011111222221111   12222111000000 0 0011112 2344455555555555


Q ss_pred             H-HHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHh
Q 044951          315 T-SMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIF  368 (375)
Q Consensus       315 ~-~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~l  368 (375)
                      . .++.+++.++.+.+...+++|++++++|++++||+++..+++|.++++.|+++
T Consensus       226 ~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       226 ALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            4 45799999999999999999999999999999999999999999999999875

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.87  E-value=3.3e-21  Score=165.12  Aligned_cols=254  Identities=16%  Similarity=0.151  Sum_probs=206.7

Q ss_pred             CChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHH
Q 044951          105 FNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAV  184 (375)
Q Consensus       105 f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l  184 (375)
                      |.+.+.+.++|+.+..+..-++..++  +..+.++-.-+.+..+++-|.+..+.+|.|++++|.++..+-|++.|+-+|+
T Consensus        50 FTfalaLVf~qC~~N~vfAkvl~~ir--~~~~~D~t~~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMi  127 (337)
T KOG1580|consen   50 FTFALALVFFQCTANTVFAKVLFLIR--KKTEIDNTPTKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMI  127 (337)
T ss_pred             ehHHHHHHHHHHHHHHHHHHhheeec--ccccccCCcchHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceee
Confidence            67778899999998887765544333  2233343345678889999999999999999999999999999999999999


Q ss_pred             HHHHHhcccccHHHHHHHHHHHHHhHhhccccc-------ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCC
Q 044951          185 GELYMFRKRQNQKVWTAMFLMIISAVSGSITDL-------SFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSL  257 (375)
Q Consensus       185 ~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~  257 (375)
                      ++.++.+++++|+++++++++++||++..+.+.       +....|-++.++|.-..++-.....|+...+       .-
T Consensus       128 lGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-------q~  200 (337)
T KOG1580|consen  128 LGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRASY-------QR  200 (337)
T ss_pred             eehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHHhh-------cc
Confidence            999999999999999999999999999877522       2235788999999999988888877765432       23


Q ss_pred             CchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhH
Q 044951          258 NEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKI  337 (375)
Q Consensus       258 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v  337 (375)
                      +.-++++++|+.+...+..-.+++||..+...+. -++|..|.-+...++.+.+-+...|..+...+|.+.|++.+.++.
T Consensus       201 ~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~-~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKf  279 (337)
T KOG1580|consen  201 TGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFV-QRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKF  279 (337)
T ss_pred             CchhhHHHHHHHHHHHhhhhheehhhHHHHHHHH-HhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHH
Confidence            4568999999999988877777788754433332 234555556777777777778888888999999999999999999


Q ss_pred             HHHHhHHhhccCcCccchhhHHHHHHHhhHh
Q 044951          338 PISLAGLVLFNVPLSVPNMFSILFGLFAGIF  368 (375)
Q Consensus       338 ~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~l  368 (375)
                      ++++.++++|+++++..||+|.++++.|...
T Consensus       280 FTil~SVllf~npls~rQwlgtvlVF~aL~~  310 (337)
T KOG1580|consen  280 FTILISVLLFNNPLSGRQWLGTVLVFSALTA  310 (337)
T ss_pred             HHHHHHHHHhcCcCcHHHHHHHHHHHHHhhh
Confidence            9999999999999999999999999988754

>TIGR00688 rarD rarD protein

Probab=99.86  E-value=4.9e-19  Score=162.29  Aligned_cols=246  Identities=11%  Similarity=0.102  Sum_probs=168.2

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHH-hhCCc-----cccccCHH-HHHHHH
Q 044951           74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFG-FFGAV-----SVEKLNWK-LIKLWI  146 (375)
Q Consensus        74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~-~~~~~-----~~~~~~~~-~~~~~~  146 (375)
                      +....+.+.++|+..    ....|+ ..  +.+ |..+.++|++++.+++.+.. ..+..     +.++.+++ .+....
T Consensus         3 g~~~~i~a~~~wg~~----~~~~k~-~~--~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (256)
T TIGR00688         3 GIIVSLLASFLFGYM----YYYSKL-LK--PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLL   74 (256)
T ss_pred             cHHHHHHHHHHHHHH----HHHHHH-hc--cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHH
Confidence            445566778889888    456697 44  467 89999999999887765433 22211     11111222 233456


Q ss_pred             HHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhHHH
Q 044951          147 PVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGYAW  226 (375)
Q Consensus       147 ~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~  226 (375)
                      ..+++...+..+.++|+++++++.++++.++.|+++++++++++|||++++++++++++++|++++...+.+.+    .+
T Consensus        75 ~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~  150 (256)
T TIGR00688        75 LCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WE  150 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HH
Confidence            66777889999999999999999999999999999999999999999999999999999999998754322221    46


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHh
Q 044951          227 QIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASG  306 (375)
Q Consensus       227 ~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  306 (375)
                      ++++++++|.|.+..||..++          +..+... ......+...+... .+++...   +.......|..+++.|
T Consensus       151 ~l~aa~~~a~~~i~~~~~~~~----------~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~l~~~g  215 (256)
T TIGR00688       151 ALVLAFSFTAYGLIRKALKNT----------DLAGFCL-ETLSLMPVAIYYLL-QTDFATV---QQTNPFPIWLLLVLAG  215 (256)
T ss_pred             HHHHHHHHHHHHHHHhhcCCC----------CcchHHH-HHHHHHHHHHHHHH-HhccCcc---cccCchhHHHHHHHHH
Confidence            789999999999998885321          1122221 11222222222211 1122111   0111112356666777


Q ss_pred             HHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhh
Q 044951          307 FLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVL  346 (375)
Q Consensus       307 ~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~  346 (375)
                      +++....+...+.+++.++.+.++..+++|++++++|+++
T Consensus       216 ~~t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       216 LITGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            7644434444589999999999999999999999999764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.85  E-value=6e-18  Score=157.21  Aligned_cols=272  Identities=15%  Similarity=0.232  Sum_probs=192.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHH
Q 044951           79 LISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVS  158 (375)
Q Consensus        79 ~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (375)
                      ++..+.|+..    ....|....+  ...+....+.|...+.+........+.....+..++.++..+..++.......+
T Consensus        13 l~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (292)
T COG0697          13 LLWGLLWGLS----FIALKLAVES--LDPFLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLL   86 (292)
T ss_pred             HHHHHHHHHH----HHHHHHHhcc--cCChHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHH
Confidence            3444455555    4455666552  232555666688887777443333321111221222234455555677888999


Q ss_pred             HhHhhcccchhHHHHHHHHHHHHHHHHHH-HHhcccccHHHHHHHHHHHHHhHhhccccccc---chhhHHHHHHHHHHH
Q 044951          159 GMYSLKYINIAMVTILKNMTNILTAVGEL-YMFRKRQNQKVWTAMFLMIISAVSGSITDLSF---DTKGYAWQIVNCILT  234 (375)
Q Consensus       159 ~~~al~~~~vs~~~il~~~~pvfv~l~~~-~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~---~~~G~~~~l~s~~~~  234 (375)
                      .+.++++++++.++++.++.|+++.+++. +++|||++++++.++++.+.|+.++...+...   ...|..+++++++++
T Consensus        87 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a~~~~  166 (292)
T COG0697          87 LFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAAALLW  166 (292)
T ss_pred             HHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999997 66799999999999999999999998865433   258999999999999


Q ss_pred             HHHHHHHHHHHhhhhhhccCCCCCchhHHH-HHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHH
Q 044951          235 ASYSLTLRRVMDKAKQATRSGSLNEVSMVL-LNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAIS  313 (375)
Q Consensus       235 a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  313 (375)
                      |++.+..|+.. +         .++....+ +...  ............+..      .......|..+.+.|+++..+.
T Consensus       167 a~~~~~~~~~~-~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~i~  228 (292)
T COG0697         167 ALYTALVKRLS-R---------LGPVTLALLLQLL--LALLLLLLFFLSGFG------APILSRAWLLLLYLGVFSTGLA  228 (292)
T ss_pred             HHHHHHHHHhc-C---------CChHHHHHHHHHH--HHHHHHHHHHhcccc------ccCCHHHHHHHHHHHHHHHHHH
Confidence            99999999875 2         34444444 2222  111111111111111      0112233567777888877655


Q ss_pred             HHH-HHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951          314 FTS-MWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM  374 (375)
Q Consensus       314 ~~~-~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~  374 (375)
                      +.. ++.+++.++...++....+|+.+++.+++++||+++..+++|.++++.|+.+....++
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~~~  290 (292)
T COG0697         229 YLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR  290 (292)
T ss_pred             HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcccc
Confidence            554 4799999999999999999999999999999999999999999999999999876643

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.82  E-value=3.1e-18  Score=152.78  Aligned_cols=261  Identities=15%  Similarity=0.118  Sum_probs=213.5

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHH
Q 044951          104 NFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTA  183 (375)
Q Consensus       104 ~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~  183 (375)
                      .|..|.++.+.|-+++.++-+.....+.  .+...++-++.+...++.....-.++..|++|++.++.++.|++..+.|+
T Consensus        47 rF~~~~fL~~~q~l~~~~~s~~~l~~~k--~~~~~~apl~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVm  124 (327)
T KOG1581|consen   47 RFEHSLFLVFCQRLVALLVSYAMLKWWK--KELSGVAPLYKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVM  124 (327)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhccc--ccCCCCCchhHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHH
Confidence            5778899999999988887765543322  22223344667778889999999999999999999999999999999999


Q ss_pred             HHHHHHhcccccHHHHHHHHHHHHHhHhhccc---c------cccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccC
Q 044951          184 VGELYMFRKRQNQKVWTAMFLMIISAVSGSIT---D------LSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRS  254 (375)
Q Consensus       184 l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~---~------~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~  254 (375)
                      +...++.|+|+++.++++.+++..|+.+....   |      ...++.|+.+...+.+..++-+...+++.++.      
T Consensus       125 lmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~------  198 (327)
T KOG1581|consen  125 LMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY------  198 (327)
T ss_pred             HHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC------
Confidence            99999999999999999999999999887653   1      12458899999999999999999999988753      


Q ss_pred             CCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhh
Q 044951          255 GSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSL  334 (375)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~  334 (375)
                       +++++.++++.|+++++.-....+..+.+.+..++-. .+|..+.-++..++++.+-+...|.-+++.+|.+...+.+.
T Consensus       199 -k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~-~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~tt  276 (327)
T KOG1581|consen  199 -KVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIK-EHPDVAFDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTT  276 (327)
T ss_pred             -CccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHH-cChhHHHHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHH
Confidence             5899999999999998877665444455544444322 24555555666667777777777888999999999999999


Q ss_pred             hhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951          335 NKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM  374 (375)
Q Consensus       335 ~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~  374 (375)
                      ++.+++.++.++||++++..|++|..+++.|+.+-.+.|.
T Consensus       277 Rk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~  316 (327)
T KOG1581|consen  277 RKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKK  316 (327)
T ss_pred             HHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHH
Confidence            9999999999999999999999999999999988666543

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.79  E-value=1.4e-17  Score=145.80  Aligned_cols=279  Identities=15%  Similarity=0.120  Sum_probs=216.0

Q ss_pred             HHHHHHHHHHHHHHHhhccCCC-hhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhh
Q 044951           85 YCISSCSMTLLNKVVLSTYNFN-AGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSL  163 (375)
Q Consensus        85 ~~~~s~~~~~~nK~~l~~~~f~-~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al  163 (375)
                      .++..+....+..++++..+|. +.|.+|+.|+++-..+.++-...-..+....+   +|.+..++.+..++.+++|.|+
T Consensus        51 ~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie~~~~~~k~r~iP---~rtY~~la~~t~gtmGLsn~Sl  127 (367)
T KOG1582|consen   51 VFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIELQLIQTKRRVIP---WRTYVILAFLTVGTMGLSNGSL  127 (367)
T ss_pred             HHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheEEEeecccceecc---hhHhhhhHhhhhhccccCcCcc
Confidence            3334444466788888888887 78899999987754433321111001122223   5677888888899999999999


Q ss_pred             cccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc----cccchhhHHHHHHHHHHHHHHHH
Q 044951          164 KYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD----LSFDTKGYAWQIVNCILTASYSL  239 (375)
Q Consensus       164 ~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~----~~~~~~G~~~~l~s~~~~a~~~i  239 (375)
                      .|+|.+.-.+.|++..+-|++.+.++-++|+.+..+.+..++.+|.++....|    ++||..|++..-++.++.|.-..
T Consensus       128 gYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgALl~DA~iGN  207 (367)
T KOG1582|consen  128 GYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGALLADAVIGN  207 (367)
T ss_pred             ccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHHHHHHHHhhH
Confidence            99999999999999999999999999999999999999999999999988765    57889999999999999999999


Q ss_pred             HHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHHHHH
Q 044951          240 TLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTSMWF  319 (375)
Q Consensus       240 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  319 (375)
                      +.+|.++..+       -+..++.+|..-.+.+.++.....++|....+.+-.-++........+-++.+++-.......
T Consensus       208 vQEk~m~~~~-------~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~~gylG~~~VLal  280 (367)
T KOG1582|consen  208 VQEKAMKMNP-------ASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSLAGYLGIVFVLAL  280 (367)
T ss_pred             HHHHHHhhCC-------CCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHHHhHhhHHHHHHH
Confidence            9999998643       344678888888899988888888888655543311011111233333444444444444567


Q ss_pred             hhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951          320 LQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK  373 (375)
Q Consensus       320 l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k  373 (375)
                      ++..++.++..+.+.++.+++++++++|..++|.+..-|..+++.|+++--+.|
T Consensus       281 I~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk  334 (367)
T KOG1582|consen  281 IKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK  334 (367)
T ss_pred             HHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence            888899999999999999999999999999999999999999999999866655

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=99.79  E-value=2.7e-18  Score=144.75  Aligned_cols=147  Identities=18%  Similarity=0.410  Sum_probs=128.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcC-----cch-hh
Q 044951          223 GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTG-----VIE-LP  296 (375)
Q Consensus       223 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~-~~  296 (375)
                      |++++++|.++.|+|.++.|+.+++..  .++.+.+++++++|+++.+++.++|..++.|++.......     +.. .+
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~--~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~   78 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVS--SNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDP   78 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchH
Confidence            789999999999999999999988642  2235799999999999999999999988887765322211     122 44


Q ss_pred             HHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951          297 MFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR  371 (375)
Q Consensus       297 ~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~  371 (375)
                      ..+..++.+|++++..+++.+++++++||+++++++.+|.+..+++|+++|||+++..+++|+++++.|+++|+|
T Consensus        79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            667888999999999999999999999999999999999999999999999999999999999999999999986

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.78  E-value=1.5e-16  Score=148.20  Aligned_cols=267  Identities=13%  Similarity=0.119  Sum_probs=185.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHh-hCCccccccCHHHHHHHHHHHHHHHH
Q 044951           76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGF-FGAVSVEKLNWKLIKLWIPVNLIFIG  154 (375)
Q Consensus        76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (375)
                      ...++++++|+...    +..|++.   +++.+.. .  ++.++.+++..... .+. +. ...++.+..-+..|+....
T Consensus         4 l~~lia~~~wGs~g----~~~k~~~---g~~~~~~-~--~~~~g~l~~~~~~~~~~~-~~-~~~~~~~~~g~l~G~~w~i   71 (290)
T TIGR00776         4 LIALIPALFWGSFV----LINVKIG---GGPYSQT-L--GTTFGALILSIAIAIFVL-PE-FWALSIFLVGLLSGAFWAL   71 (290)
T ss_pred             HHHHHHHHHHhhhH----HHHhccC---CCHHHHH-H--HHHHHHHHHHHHHHHHhC-Cc-ccccHHHHHHHHHHHHHHh
Confidence            34566788899884    4557654   5664433 2  56666665544322 221 11 1112333334445566788


Q ss_pred             HHHHHhHhhcccchhHHHHHHH-HHHHHHHHHHHHHhcccccHHH----HHHHHHHHHHhHhhcccccc-------cc-h
Q 044951          155 MLVSGMYSLKYINIAMVTILKN-MTNILTAVGELYMFRKRQNQKV----WTAMFLMIISAVSGSITDLS-------FD-T  221 (375)
Q Consensus       155 ~~~~~~~al~~~~vs~~~il~~-~~pvfv~l~~~~~~~~~~~~~~----~~~l~l~~~Gv~l~~~~~~~-------~~-~  221 (375)
                      .+.++..|.++++++.+..+.+ +.++++.+.+.+++|||+++++    +++++++++|+++.+..+.+       .+ .
T Consensus        72 g~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~  151 (290)
T TIGR00776        72 GQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFK  151 (290)
T ss_pred             hhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchh
Confidence            8899999999999999988888 8889999999999999999999    99999999999988653211       33 6


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHH
Q 044951          222 KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVA  301 (375)
Q Consensus       222 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (375)
                      .|++++++++++|+.|.+..|+.           +.++++..+.+..........+.....+      ...+.....|..
T Consensus       152 ~Gi~~~l~sg~~y~~~~~~~~~~-----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~------~~~~~~~~~~~~  214 (290)
T TIGR00776       152 KGILLLLMSTIGYLVYVVVAKAF-----------GVDGLSVLLPQAIGMVIGGIIFNLGHIL------AKPLKKYAILLN  214 (290)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHc-----------CCCcceehhHHHHHHHHHHHHHHHHHhc------ccchHHHHHHHH
Confidence            89999999999999999999864           1567666444332111111111111100      011112222333


Q ss_pred             HHHHhHHHHHHHHHHH-HHhh-ccCchhHhHHHhhhhHHHHHhHHhhccCcCccchh----hHHHHHHHhhHhhhhcc
Q 044951          302 ATASGFLGLAISFTSM-WFLQ-QTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNM----FSILFGLFAGIFFARAK  373 (375)
Q Consensus       302 l~~~~~~~~~~~~~~~-~~l~-~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~----iG~~l~l~G~~ly~~~k  373 (375)
                      ++ .|++. .+.+..| ...+ +.++.+.++...++|+.+++.+++++||+.++.++    +|.++++.|+.+-...|
T Consensus       215 ~~-~Gi~~-~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~~~  290 (290)
T TIGR00776       215 IL-PGLMW-GIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGIGK  290 (290)
T ss_pred             HH-HHHHH-HHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhccC
Confidence            33 77774 5555554 6777 89999999999999999999999999999999999    99999999998866544

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.75  E-value=2.6e-15  Score=130.75  Aligned_cols=247  Identities=14%  Similarity=0.073  Sum_probs=189.9

Q ss_pred             HHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHH
Q 044951           95 LNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL  174 (375)
Q Consensus        95 ~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il  174 (375)
                      +.|-+|.  .+. |.-.+++|..++.+++..+.+-.   +.++++++++.+...|+....+|.+++.|++.+|.+.+..+
T Consensus        30 ~Ak~LFP--~vG-~~g~t~lRl~~aaLIll~l~RPw---r~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAi  103 (292)
T COG5006          30 FAKSLFP--LVG-AAGVTALRLAIAALILLALFRPW---RRRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAI  103 (292)
T ss_pred             HHHHHcc--ccC-hhhHHHHHHHHHHHHHHHHhhHH---HhccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhh
Confidence            6688886  445 67889999999988876643311   24567788899999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc---ccccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 044951          175 KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT---DLSFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQA  251 (375)
Q Consensus       175 ~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~---~~~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~  251 (375)
                      ..+.|+.+.++..    +|  .+..+.+.+.+.|..++.-.   ..+.|+.|..+++++..||++|-+..||.-+.    
T Consensus       104 EF~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~----  173 (292)
T COG5006         104 EFTGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGRA----  173 (292)
T ss_pred             hhccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhccc----
Confidence            9999999887653    32  34455667788998876532   35678899999999999999999999887431    


Q ss_pred             ccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHHHHHHH-HHHhhccCchhHhH
Q 044951          252 TRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLAISFTS-MWFLQQTGPTTYSL  330 (375)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~l~~~s~~t~si  330 (375)
                           .+.-+-+.+-...+.+..+|+.....+       +.+.+|.....-+..++++..+-|+. +-.+++.++-+.++
T Consensus       174 -----~~g~~g~a~gm~vAaviv~Pig~~~ag-------~~l~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~  241 (292)
T COG5006         174 -----EHGTAGVAVGMLVAALIVLPIGAAQAG-------PALFSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGT  241 (292)
T ss_pred             -----CCCchHHHHHHHHHHHHHhhhhhhhcc-------hhhcChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHH
Confidence                 233334444444555555665442211       12223444455677788888888875 56899999999999


Q ss_pred             HHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951          331 VGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF  369 (375)
Q Consensus       331 ~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly  369 (375)
                      ...+||..+.+.|++++||.+|..||.|++.++.++.-.
T Consensus       242 LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~  280 (292)
T COG5006         242 LLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGS  280 (292)
T ss_pred             HHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcc
Confidence            999999999999999999999999999999999888643

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.74  E-value=8e-15  Score=131.01  Aligned_cols=278  Identities=11%  Similarity=0.122  Sum_probs=206.9

Q ss_pred             cCCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh--CCcccccc--CHHHHHH
Q 044951           69 EHGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF--GAVSVEKL--NWKLIKL  144 (375)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~--~~~~~~~~--~~~~~~~  144 (375)
                      ++..++....+.+.++||..    .++-|.+-   +.| +..+...|.+.+..++......  +.......  +++.+..
T Consensus         3 ~~~~~Gil~~l~Ay~lwG~l----p~y~kll~---~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~   74 (293)
T COG2962           3 KDSRKGILLALLAYLLWGLL----PLYFKLLE---PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLM   74 (293)
T ss_pred             CcccchhHHHHHHHHHHHHH----HHHHHHHc---cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHH
Confidence            33556778888899999988    66778764   456 7889999988887666554332  11111111  2234444


Q ss_pred             HHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccccchhhH
Q 044951          145 WIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLSFDTKGY  224 (375)
Q Consensus       145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~  224 (375)
                      ....++....+++.+.+|...-.+=.+.+-....|++.++++++++|||.++.++++++++.+||....+...++++..+
T Consensus        75 ~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval  154 (293)
T COG2962          75 LALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVAL  154 (293)
T ss_pred             HHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHH
Confidence            56666778888999999998877777778889999999999999999999999999999999999998888788886643


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHH
Q 044951          225 AWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATA  304 (375)
Q Consensus       225 ~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  304 (375)
                          .=++.+++|...=|+.           ++|+.+-.....+.-.|..+......++-....   ..+.+..|..+..
T Consensus       155 ----~la~sf~~Ygl~RK~~-----------~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~---~~~~~~~~~LLv~  216 (293)
T COG2962         155 ----ALALSFGLYGLLRKKL-----------KVDALTGLTLETLLLLPVALIYLLFLADSGQFL---QQNANSLWLLLVL  216 (293)
T ss_pred             ----HHHHHHHHHHHHHHhc-----------CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhh---hcCCchHHHHHHH
Confidence                4467788887755543           377777777777666677666555544422211   1122334566777


Q ss_pred             HhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          305 SGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       305 ~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      .|..+.+--......-++.+=.+.++..+.+|....++|+++|||+++..+.+..+.+-.|.++|...
T Consensus       217 aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d  284 (293)
T COG2962         217 AGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSID  284 (293)
T ss_pred             hhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            77766543322236788999999999999999999999999999999999999999999999998653

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=99.71  E-value=7.1e-17  Score=141.93  Aligned_cols=254  Identities=19%  Similarity=0.285  Sum_probs=195.9

Q ss_pred             hHHHHHHHHHHHHHHHHHHH-hhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcc-cchhHHHHHHHHHHHHHHHH
Q 044951          108 GISLMFYQNLISTLVVAVFG-FFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKY-INIAMVTILKNMTNILTAVG  185 (375)
Q Consensus       108 p~~l~~~q~~~~~l~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~vs~~~il~~~~pvfv~l~  185 (375)
                      --.+|+.|+++...--++.- .+...+ ++.+   .|.+...-..+...++++|+++++ +|++..-+.|+-+++-+|++
T Consensus        33 gNLITFaqFlFia~eGlif~skf~~~k-~kip---lk~Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~  108 (330)
T KOG1583|consen   33 GNLITFAQFLFIATEGLIFTSKFFTVK-PKIP---LKDYAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMIL  108 (330)
T ss_pred             eeehHHHHHHHHHHhceeeeccccccC-CCCc---hhhhheehheeeeeeeeccceeeecccceEEEEEecCcHHHHHHH
Confidence            45788899887555433321 111112 3344   445566666777889999999998 99999999999999999999


Q ss_pred             HHHHhcccccHHHHHHHHHHHHHhHhhccc---ccc--------------cc--hhhHHHHHHHHHHHHHHHHHHHHHHh
Q 044951          186 ELYMFRKRQNQKVWTAMFLMIISAVSGSIT---DLS--------------FD--TKGYAWQIVNCILTASYSLTLRRVMD  246 (375)
Q Consensus       186 ~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~---~~~--------------~~--~~G~~~~l~s~~~~a~~~i~~k~~~~  246 (375)
                      ++++.|+|++.+++.+++++.+|+++....   |..              +.  ..|+.+...+.+..|...++.++..+
T Consensus       109 g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~  188 (330)
T KOG1583|consen  109 GWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQ  188 (330)
T ss_pred             HHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999987652   111              11  35888888999999999999999988


Q ss_pred             hhhhhccCCCCCchhHHHHHhhhHHHHHHHHH-HHhhhhhHhHhcC-----c--chhhHHHHHHHHHhHHHHHHHHHHHH
Q 044951          247 KAKQATRSGSLNEVSMVLLNNLLSLPFAMFLI-LIFDEWRYVMNTG-----V--IELPMFWVAATASGFLGLAISFTSMW  318 (375)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~-----~--~~~~~~~~~l~~~~~~~~~~~~~~~~  318 (375)
                      ++.       =++-+.+||+.+.+.|..+... -...+|......+     .  ..-|..|..++.+++.-++..-..+.
T Consensus       189 kyG-------Kh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~  261 (330)
T KOG1583|consen  189 KYG-------KHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYI  261 (330)
T ss_pred             Hhc-------CChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhh
Confidence            754       2456899999999888766531 1122344333221     1  12466788888888777766666667


Q ss_pred             HhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          319 FLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       319 ~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      .-.++++.|++++-++++.+..+++++.|+++++++.|+|..++..|.++|+-.
T Consensus       262 L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~  315 (330)
T KOG1583|consen  262 LTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV  315 (330)
T ss_pred             hhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            778999999999999999999999999999999999999999999999999753

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.70  E-value=1.9e-15  Score=136.49  Aligned_cols=210  Identities=13%  Similarity=0.229  Sum_probs=167.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc-
Q 044951          139 WKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL-  217 (375)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~-  217 (375)
                      +++...+...+++|...+.+.+.++++++.+++++++++..+++++++.+++|||.++++|.++.+.++|+.+...++. 
T Consensus        14 ~~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   14 PKDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            4556667778889999999999999999999999999999999999999999999999999999999999998755311 


Q ss_pred             --------c--------cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHh
Q 044951          218 --------S--------FDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIF  281 (375)
Q Consensus       218 --------~--------~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  281 (375)
                              .        ....|++..+.++++.++..++.+|++++.+       .+.+.........+.++.++... .
T Consensus        94 ~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~-------~s~~~~N~qL~~~gi~~~~~~~~-~  165 (244)
T PF04142_consen   94 SSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN-------VSLWIQNMQLYLFGILFNLLALL-L  165 (244)
T ss_pred             ccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc-------hhHHHHHHHHHHHHHHHHHHHHh-c
Confidence                    1        1257999999999999999999999998632       55565555556667766655533 2


Q ss_pred             hhhhHhHh---cCcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhH
Q 044951          282 DEWRYVMN---TGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFS  358 (375)
Q Consensus       282 ~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG  358 (375)
                      .++....+   +++++ +..|..+...++.|..+.+    .+|+.+...-+....+.-+.+.++++++||.+++....+|
T Consensus       166 ~~~~~~~~~g~f~G~~-~~~~~~i~~~a~gGllva~----v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg  240 (244)
T PF04142_consen  166 SDGSAISESGFFHGYS-WWVWIVIFLQAIGGLLVAF----VLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLG  240 (244)
T ss_pred             ccccccccCCchhhcc-hHHHHHHHHHHHhhHHHHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhh
Confidence            34433222   23342 3456666777777766664    4899999999999999999999999999999999999998


Q ss_pred             HHH
Q 044951          359 ILF  361 (375)
Q Consensus       359 ~~l  361 (375)
                      ..+
T Consensus       241 ~~~  243 (244)
T PF04142_consen  241 AAL  243 (244)
T ss_pred             eec
Confidence            765

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=99.69  E-value=1.2e-15  Score=139.76  Aligned_cols=226  Identities=15%  Similarity=0.113  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc--
Q 044951          140 KLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL--  217 (375)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~--  217 (375)
                      +..+.-+..+.+-.+.++++|.||.+++++..+++.+++-+||..++.++-.||+++.+.+++++.+.|++++..+|.  
T Consensus       157 ~~ak~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~  236 (416)
T KOG2765|consen  157 QTAKLSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQ  236 (416)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccc
Confidence            334444555666677899999999999999999999999999999999999999999999999999999999988743  


Q ss_pred             ------ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcC
Q 044951          218 ------SFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTG  291 (375)
Q Consensus       218 ------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  291 (375)
                            +-+..|.++++++|++||+|.++.||..++.     ..++|.-....|..++....+.|..++..-. ....++
T Consensus       237 ~~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~e-----g~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~  310 (416)
T KOG2765|consen  237 NSDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDE-----GERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFE  310 (416)
T ss_pred             cccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccc-----cccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCccc
Confidence                  2347899999999999999999999976542     1356655555566666666666544332221 111121


Q ss_pred             cchhhHHHHHHHHHhHHHHH-HHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951          292 VIELPMFWVAATASGFLGLA-ISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       292 ~~~~~~~~~~l~~~~~~~~~-~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                      -.....+ ..+++.++++.+ --|...++.-.+||.+.++..++.-..+++.-.++=+.++++.+++|...+++|.+..+
T Consensus       311 lP~~~q~-~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn  389 (416)
T KOG2765|consen  311 LPSSTQF-SLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVN  389 (416)
T ss_pred             CCCCcee-EeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhhee
Confidence            1112222 345555566554 45665588889999999999999999999999988899999999999999999998877


Q ss_pred             hc
Q 044951          371 RA  372 (375)
Q Consensus       371 ~~  372 (375)
                      +.
T Consensus       390 ~~  391 (416)
T KOG2765|consen  390 IS  391 (416)
T ss_pred             cc
Confidence            64

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.66  E-value=1.7e-13  Score=125.87  Aligned_cols=273  Identities=14%  Similarity=0.198  Sum_probs=196.5

Q ss_pred             HHHHHHHHHHHHhhcc--CCChhHHHHHHHHHHHHHHHHHHHhhC-----Ccccccc------CHHHHHHHHHHHHHHHH
Q 044951           88 SSCSMTLLNKVVLSTY--NFNAGISLMFYQNLISTLVVAVFGFFG-----AVSVEKL------NWKLIKLWIPVNLIFIG  154 (375)
Q Consensus        88 ~s~~~~~~nK~~l~~~--~f~~p~~l~~~q~~~~~l~l~~~~~~~-----~~~~~~~------~~~~~~~~~~~~~~~~~  154 (375)
                      .+.++.+.-||.-...  .|. |.+..+.--++-.+++......+     ....+.+      .+++..++...+++|++
T Consensus        26 ~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYal  104 (345)
T KOG2234|consen   26 QNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYAL  104 (345)
T ss_pred             HHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHH
Confidence            3444456666665543  344 55555554444444443322221     1111111      23355567777889999


Q ss_pred             HHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc-----c------cccchhh
Q 044951          155 MLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT-----D------LSFDTKG  223 (375)
Q Consensus       155 ~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~-----~------~~~~~~G  223 (375)
                      .+.+...++.+.+.+++++..++..+.|+++.+++++||.++++|.++++.++|+.+.-..     +      ..-++.|
T Consensus       105 qNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G  184 (345)
T KOG2234|consen  105 QNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLG  184 (345)
T ss_pred             hhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhh
Confidence            9999999999999999999999999999999999999999999999999999999997621     1      1223789


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHh---cCcchhhHHHH
Q 044951          224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMN---TGVIELPMFWV  300 (375)
Q Consensus       224 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~  300 (375)
                      +...+.++++.++-.++.+|++++.       +.+.|-...-...++.++.+..... .|+.....   +.++ +...|.
T Consensus       185 ~~avl~~c~~SgfAgvYfEkiLK~s-------~~s~wi~NiqL~~~g~~f~~l~~~~-~d~~~i~~~gff~G~-s~~vw~  255 (345)
T KOG2234|consen  185 LVAVLVACFLSGFAGVYFEKILKGS-------NVSLWIRNIQLYFFGILFNLLTILL-QDGEAINEYGFFYGY-SSIVWL  255 (345)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC-------CchHHHHHHHHHHHHHHHHHHHHhh-ccccccccCCccccc-cHHHHH
Confidence            9999999999999999999998752       3455544444444555555444333 24333321   2233 345678


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951          301 AATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAKM  374 (375)
Q Consensus       301 ~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k~  374 (375)
                      .++..++.|..+++.    +++.+-..-..+..+..+.+.+.++.+||-++|....+|..+++.++.+|+..+.
T Consensus       256 vVl~~a~gGLlvs~v----~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~  325 (345)
T KOG2234|consen  256 VVLLNAVGGLLVSLV----MKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPA  325 (345)
T ss_pred             HHHHHhccchhHHHH----HHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCc
Confidence            888888888777654    6777777778888888999999999999999999999999999999999986543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.61  E-value=1.7e-16  Score=138.84  Aligned_cols=263  Identities=13%  Similarity=0.094  Sum_probs=184.8

Q ss_pred             HHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccc--cccCHHHHHHHHHHHHHHHHHHHHHhHhhcc
Q 044951           88 SSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSV--EKLNWKLIKLWIPVNLIFIGMLVSGMYSLKY  165 (375)
Q Consensus        88 ~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~  165 (375)
                      ++.++.+..| +++   ++ |..+...|+++-.+..+.+........  ++-.|+   .++.-|+.-.......++|++|
T Consensus        49 f~~~~vv~t~-~~e---~~-p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~---~LiLRg~mG~tgvmlmyya~~~  120 (346)
T KOG4510|consen   49 FNSCMVVSTK-VLE---ND-PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRK---WLILRGFMGFTGVMLMYYALMY  120 (346)
T ss_pred             HhhHHHhhhh-hhc---cC-hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEE---EEEeehhhhhhHHHHHHHHHhh
Confidence            3444444444 433   34 777887786666555554432211111  111111   1122255555667778899999


Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc-----ccc---------ccchhhHHHHHHHH
Q 044951          166 INIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI-----TDL---------SFDTKGYAWQIVNC  231 (375)
Q Consensus       166 ~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~-----~~~---------~~~~~G~~~~l~s~  231 (375)
                      .+.+-++++..++|+|+.++++.++||+.+..+.++..+.+.||+++..     ||.         +.+..|.+-++.+.
T Consensus       121 mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~  200 (346)
T KOG4510|consen  121 MSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSV  200 (346)
T ss_pred             cchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhH
Confidence            9999999999999999999999999999999999999999999999853     221         23456888888888


Q ss_pred             HHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHH
Q 044951          232 ILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLA  311 (375)
Q Consensus       232 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  311 (375)
                      +..|.--++.|++-+         +.+..-...|...++.+..++.....++++...   .+.   .|..++..|++++.
T Consensus       201 lf~asvyIilR~iGk---------~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP~---cgk---dr~l~~~lGvfgfi  265 (346)
T KOG4510|consen  201 LFGASVYIILRYIGK---------NAHAIMSVSYFSLITLVVSLIGCASIGAVQLPH---CGK---DRWLFVNLGVFGFI  265 (346)
T ss_pred             hhhhhHHHHHHHhhc---------cccEEEEehHHHHHHHHHHHHHHhhccceecCc---ccc---ceEEEEEehhhhhH
Confidence            888887788877633         356555555656666666555444445444321   111   23466778888888


Q ss_pred             HHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951          312 ISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK  373 (375)
Q Consensus       312 ~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k  373 (375)
                      .+...-..+++--+...++..+..-+++.+.-+++|++.++++.++|+++++.+.++....|
T Consensus       266 gQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k  327 (346)
T KOG4510|consen  266 GQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK  327 (346)
T ss_pred             HHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence            77776677777777788999999999999999999999999999999999988887765443

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.58  E-value=2.5e-13  Score=119.93  Aligned_cols=218  Identities=16%  Similarity=0.220  Sum_probs=170.9

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc-----
Q 044951          143 KLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL-----  217 (375)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~-----  217 (375)
                      +..+|.+++=....-+-+.++.+++++-+||+|....+||.+++..+++++.+.++|+++....+|++.++..|.     
T Consensus        87 ~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~  166 (372)
T KOG3912|consen   87 VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTD  166 (372)
T ss_pred             ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccC
Confidence            345666776666666778899999999999999999999999999999999999999999999999998876432     


Q ss_pred             -----ccchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHh-----h-----
Q 044951          218 -----SFDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIF-----D-----  282 (375)
Q Consensus       218 -----~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~-----  282 (375)
                           +-...|..+.+++-+..|.+.+..+|.+++.+       .+|.+...|..+++...+..+.+..     +     
T Consensus       167 p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~n-------V~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~  239 (372)
T KOG3912|consen  167 PYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSN-------VAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSC  239 (372)
T ss_pred             CccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhcc-------CCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcC
Confidence                 22256999999999999999999999888754       8899999999998876655543321     1     


Q ss_pred             -------hhhHhHhcCcc-hhhHHHHHHHHHhHHH--HHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCc
Q 044951          283 -------EWRYVMNTGVI-ELPMFWVAATASGFLG--LAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLS  352 (375)
Q Consensus       283 -------~~~~~~~~~~~-~~~~~~~~l~~~~~~~--~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t  352 (375)
                             ||.+.+.  .. ..|.  +.+...|...  ...|+......+..|++|-.+...++..+..+++.....|.+.
T Consensus       240 ~~~g~~eD~~~~~~--~~~e~p~--l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~  315 (372)
T KOG3912|consen  240 NPRGVLEDWGDAFA--ALQESPS--LAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFH  315 (372)
T ss_pred             CCCcchhhHHHHHH--HhcCCch--hHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHH
Confidence                   1111110  00 0121  2333333322  2346666677888999999999999999999999999999999


Q ss_pred             cchhhHHHHHHHhhHhhhh
Q 044951          353 VPNMFSILFGLFAGIFFAR  371 (375)
Q Consensus       353 ~~~~iG~~l~l~G~~ly~~  371 (375)
                      ..|+.|.++-+.|+++|+.
T Consensus       316 llqilGFliLi~Gi~lY~~  334 (372)
T KOG3912|consen  316 LLQILGFLILIMGIILYNQ  334 (372)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999974

>TIGR00803 nst UDP-galactose transporter

Probab=99.27  E-value=3.4e-11  Score=107.91  Aligned_cols=187  Identities=16%  Similarity=0.175  Sum_probs=129.0

Q ss_pred             cchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc---------------------------c
Q 044951          166 INIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL---------------------------S  218 (375)
Q Consensus       166 ~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~---------------------------~  218 (375)
                      +++|.....++..++++++.+....++|++..++++.+++..|+.....+|.                           .
T Consensus         2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g   81 (222)
T TIGR00803         2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG   81 (222)
T ss_pred             ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence            5788899999999999999999999999999999999999999875332211                           1


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhh----hhHhHhc---C
Q 044951          219 FDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDE----WRYVMNT---G  291 (375)
Q Consensus       219 ~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~---~  291 (375)
                      ..+.|....+.++++.++-.++.++..+++            +.++|.+....+...+.....++    .......   .
T Consensus        82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (222)
T TIGR00803        82 NPVVGLSAVLSALLSSGFAGVYFEKILKDG------------DTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFI  149 (222)
T ss_pred             cHHHHHHHHHHHHHHHhhhHHHHHHcccCC------------CCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCccc
Confidence            224566666777777777777777654421            12244444444444433211111    1111111   1


Q ss_pred             cchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951          292 VIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF  369 (375)
Q Consensus       292 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly  369 (375)
                      ++ +...|..++..++.    .....+.+++.++++.+++..++++.+.++++++||++++..+++|..+++.|+.+|
T Consensus       150 ~~-~~~~~~~~~~~a~~----~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY  222 (222)
T TIGR00803       150 GY-PTAVWIVGLLNVGG----GLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY  222 (222)
T ss_pred             CC-chHHHHHHHHHHhc----CceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence            11 22233333333332    333457799999999999999999999999999999999999999999999998876

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.22  E-value=1.2e-10  Score=94.09  Aligned_cols=117  Identities=21%  Similarity=0.351  Sum_probs=96.4

Q ss_pred             HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-CCccccccCHHHHHHHHHHHHH-HHHHHHHHhHhhcccchhH
Q 044951           93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-GAVSVEKLNWKLIKLWIPVNLI-FIGMLVSGMYSLKYINIAM  170 (375)
Q Consensus        93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~al~~~~vs~  170 (375)
                      ..++|...+  +++ |...+++|+.++.+ +..+... +..+.++.+++++......+++ ......+.+.++++++++.
T Consensus         7 ~~~~k~~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~   82 (126)
T PF00892_consen    7 SVFSKKLLK--KIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALKYISASI   82 (126)
T ss_pred             HHHHHHHhc--cCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHHhcchhH
Confidence            567898887  467 88899999999986 4433332 2222345566667777777766 5889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhc
Q 044951          171 VTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGS  213 (375)
Q Consensus       171 ~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~  213 (375)
                      .+++.++.|+++.+++++++||++++++++++++++.|++++.
T Consensus        83 ~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   83 VSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.09  E-value=8.6e-10  Score=86.55  Aligned_cols=132  Identities=14%  Similarity=0.124  Sum_probs=107.8

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-CCcc-ccccCHHHHHHHHHHHHHHH
Q 044951           76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-GAVS-VEKLNWKLIKLWIPVNLIFI  153 (375)
Q Consensus        76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~  153 (375)
                      ..++++.++|++.    .++.|..++  +.+ |.+-+..|.++....+..+... |..+ ....+.|.+..+..-|+.-.
T Consensus         6 ~~ALLsA~fa~L~----~iF~KIGl~--~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~g   78 (140)
T COG2510           6 IYALLSALFAGLT----PIFAKIGLE--GVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGG   78 (140)
T ss_pred             HHHHHHHHHHHHH----HHHHHHhcc--ccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHH
Confidence            4556677778777    568899998  567 7888999999887777665443 3211 22346677777777788889


Q ss_pred             HHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951          154 GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI  214 (375)
Q Consensus       154 ~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~  214 (375)
                      +.+.+++.|++.-++|...-+-.++|+++.+++++++|||++..+|+++.++++|+++++.
T Consensus        79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            9999999999999999999999999999999999999999999999999999999987653

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.06  E-value=9e-10  Score=92.84  Aligned_cols=212  Identities=13%  Similarity=0.109  Sum_probs=155.2

Q ss_pred             HHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc--ccc
Q 044951          142 IKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD--LSF  219 (375)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~--~~~  219 (375)
                      +++..|.+++..+.++.+..+++.++.+.++.+.++.-.|+.+++++.+|+|+..-++++.++++.|++++++.|  ...
T Consensus        53 ~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~a~  132 (290)
T KOG4314|consen   53 FIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEHAD  132 (290)
T ss_pred             eeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchhhh
Confidence            344567777888899999999999999999999999999999999999999999999999999999999999865  456


Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHH-----HHH---hhhhhHhHhcC
Q 044951          220 DTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFL-----ILI---FDEWRYVMNTG  291 (375)
Q Consensus       220 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~---~~~~~~~~~~~  291 (375)
                      ++.|+..+++|++..|+|.++.|+.....+       +.  +...+++..++.-+...     .+.   .|.|+.. ...
T Consensus       133 e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-------~G--daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsF-A~~  202 (290)
T KOG4314|consen  133 EIIGIACAVGSAFMAALYKVLFKMFIGNAN-------FG--DAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSF-AAA  202 (290)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccCc-------ch--hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHH-hhC
Confidence            789999999999999999999999876432       22  33333333333222211     111   1223321 111


Q ss_pred             cchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951          292 VIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF  369 (375)
Q Consensus       292 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly  369 (375)
                      .      |.-+...+.+....++.....+..+.|.-.|+-....-.-......++-+-..+...+.|.++++.|.++.
T Consensus       203 P------WG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLi  274 (290)
T KOG4314|consen  203 P------WGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILI  274 (290)
T ss_pred             C------chhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhe
Confidence            2      34444555555556666555666777877777666655666666666666778888999999999998774

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.03  E-value=6.9e-11  Score=103.34  Aligned_cols=256  Identities=13%  Similarity=0.100  Sum_probs=176.5

Q ss_pred             HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHH
Q 044951           93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVT  172 (375)
Q Consensus        93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~  172 (375)
                      .+.+.++-.. +.+.|..=++..+..-+++-.....++.   +.+ ...|++++.+++.=.=.+++--.|.||++..-..
T Consensus        34 a~tss~la~k-~iN~Pt~QtFl~Y~LLalVY~~~~~fR~---~~~-~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~  108 (336)
T KOG2766|consen   34 AFTSSELARK-GINAPTSQTFLNYVLLALVYGPIMLFRR---KYI-KAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIM  108 (336)
T ss_pred             hhhhHHHHhc-cCCCccHHHHHHHHHHHHHHhhHHHhhh---HHH-HHHHHHhhheeEEeecccEEEeeehhhcchHHHH
Confidence            4455555443 4666766666555443333333333332   111 2235556666655555566666899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc--------cccchhhHHHHHHHHHHHHHHHHHHHHH
Q 044951          173 ILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD--------LSFDTKGYAWQIVNCILTASYSLTLRRV  244 (375)
Q Consensus       173 il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~--------~~~~~~G~~~~l~s~~~~a~~~i~~k~~  244 (375)
                      .+-+-..+.+++++++++|.|+.+.++.++...+.|++++...|        .+-+..|++++++++-+||.-++..+.+
T Consensus       109 lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEfl  188 (336)
T KOG2766|consen  109 LLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFL  188 (336)
T ss_pred             HHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHHHH
Confidence            99999999999999999999999999999999999999987653        2334689999999999999988887776


Q ss_pred             HhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHH-hHHHHHHHHHHH-HHhhc
Q 044951          245 MDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATAS-GFLGLAISFTSM-WFLQQ  322 (375)
Q Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~-~~l~~  322 (375)
                      .+         +.+..+.+.+.++++.+...+-.+ .+ ..... .-+|...    ...+. ..+..++.|+.. ..++.
T Consensus       189 vk---------n~d~~elm~~lgLfGaIIsaIQ~i-~~-~~~~~-tl~w~~~----i~~yl~f~L~MFllYsl~pil~k~  252 (336)
T KOG2766|consen  189 VK---------NADRVELMGFLGLFGAIISAIQFI-FE-RHHVS-TLHWDSA----IFLYLRFALTMFLLYSLAPILIKT  252 (336)
T ss_pred             Hh---------cCcHHHHHHHHHHHHHHHHHHHHh-hh-cccee-eEeehHH----HHHHHHHHHHHHHHHHhhHHheec
Confidence            55         367778887777777766655422 22 11111 1133211    11222 223333445544 46778


Q ss_pred             cCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951          323 TGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR  371 (375)
Q Consensus       323 ~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~  371 (375)
                      +|++...+.-......++++  ..||-+.++.-.+..+.+..|.++|.-
T Consensus       253 ~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~  299 (336)
T KOG2766|consen  253 NSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST  299 (336)
T ss_pred             CCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence            88888888777788888887  778888999999999999999999954

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=99.02  E-value=3.1e-09  Score=84.68  Aligned_cols=104  Identities=22%  Similarity=0.331  Sum_probs=78.8

Q ss_pred             HHHHHHHHHHHHHHHhhCC--ccc-cccCHHHHHHHHHHHHHH-HHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHH
Q 044951          113 FYQNLISTLVVAVFGFFGA--VSV-EKLNWKLIKLWIPVNLIF-IGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELY  188 (375)
Q Consensus       113 ~~q~~~~~l~l~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~  188 (375)
                      .+|+.++.+++......+.  .+. +..+++.+..+...+++. .....+..+|+++.+ +...++.+++|+++++++++
T Consensus         2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~   80 (113)
T PF13536_consen    2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL   80 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence            4677777766655443321  111 122223344445556555 488999999999999 68889999999999999999


Q ss_pred             HhcccccHHHHHHHHHHHHHhHhhccccc
Q 044951          189 MFRKRQNQKVWTAMFLMIISAVSGSITDL  217 (375)
Q Consensus       189 ~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~  217 (375)
                      ++|||++++++.+++++++|++++.+.|.
T Consensus        81 ~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   81 FFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            99999999999999999999999988764

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.01  E-value=2.6e-09  Score=83.90  Aligned_cols=135  Identities=12%  Similarity=0.235  Sum_probs=108.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHH
Q 044951          224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAAT  303 (375)
Q Consensus       224 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  303 (375)
                      .+|++++++.+++-.++.|--.+         ..||.--++.-+.....++..+....+.|+...+.    ++..|..++
T Consensus         5 ~~~ALLsA~fa~L~~iF~KIGl~---------~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~----~~k~~lfli   71 (140)
T COG2510           5 IIYALLSALFAGLTPIFAKIGLE---------GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEI----GPKSWLFLI   71 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcc---------ccCccHHHHHHHHHHHHHHHHHHHhcCceeccccc----Ccceehhhh
Confidence            58999999999999998876554         37887777777777777777777777777654221    334467888


Q ss_pred             HHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhh
Q 044951          304 ASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFAR  371 (375)
Q Consensus       304 ~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~  371 (375)
                      ++|+.+-.--+..|++++.=.+.......-..+++++++|++++||.++..+++|++++..|.++.++
T Consensus        72 lSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          72 LSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            99976666566667899988888889999999999999999999999999999999999999887543

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.97  E-value=1.6e-07  Score=85.10  Aligned_cols=209  Identities=14%  Similarity=0.137  Sum_probs=155.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHhHhhcc
Q 044951          140 KLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVW----TAMFLMIISAVSGSI  214 (375)
Q Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~----~~l~l~~~Gv~l~~~  214 (375)
                      +.+..-+..|++....+...+.|.+++.+|.+-=+ ...+.+.+.+.+.++++|..+...+    ++++++++|+++.++
T Consensus        43 ~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~  122 (269)
T PF06800_consen   43 TSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSY  122 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcc
Confidence            55666777888999999999999999888765444 4788889999999999998876665    488899999999887


Q ss_pred             ccccc--------chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhH
Q 044951          215 TDLSF--------DTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRY  286 (375)
Q Consensus       215 ~~~~~--------~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  286 (375)
                      .|.+.        ...|+...+.+.+.|..|.+..|-.           +.|+++..+=+.+-.....+++....+  +.
T Consensus       123 ~~~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~-----------~~~~~~~~lPqaiGm~i~a~i~~~~~~--~~  189 (269)
T PF06800_consen  123 QDKKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF-----------HVSGWSAFLPQAIGMLIGAFIFNLFSK--KP  189 (269)
T ss_pred             ccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----------CCChhHhHHHHHHHHHHHHHHHhhccc--cc
Confidence            54321        2469999999999999999987652           378888887665544444444443321  11


Q ss_pred             hHhcCcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccch----hhHHHHH
Q 044951          287 VMNTGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPN----MFSILFG  362 (375)
Q Consensus       287 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~----~iG~~l~  362 (375)
                      ..+      ...| .=+..|++....|...+...++.+..+.-...-+..+++++.|.++++|.-+..+    ++|.+++
T Consensus       190 ~~~------k~~~-~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Li  262 (269)
T PF06800_consen  190 FFE------KKSW-KNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILI  262 (269)
T ss_pred             ccc------cchH-HhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHH
Confidence            111      1112 2356677777777777778888899888889999999999999999999988764    4677777


Q ss_pred             HHhhHh
Q 044951          363 LFAGIF  368 (375)
Q Consensus       363 l~G~~l  368 (375)
                      +.|.++
T Consensus       263 v~G~il  268 (269)
T PF06800_consen  263 VIGAIL  268 (269)
T ss_pred             HHhhhc
Confidence            777654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.97  E-value=3.8e-09  Score=85.15  Aligned_cols=124  Identities=17%  Similarity=0.274  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHHHHhHHHHH
Q 044951          232 ILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAATASGFLGLA  311 (375)
Q Consensus       232 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  311 (375)
                      ++||.+.+..|+..++         .++....++....+.+ .++.....+..+    ...+ ++..+....+.++++..
T Consensus         1 ~~~a~~~~~~k~~~~~---------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~   65 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK---------ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNL-SPRQWLWLLFLGLLGTA   65 (126)
T ss_pred             ceeeeHHHHHHHHhcc---------CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCC-ChhhhhhhhHhhcccee
Confidence            3678888888887653         7899999999888887 555555444332    1111 12223455666666544


Q ss_pred             -HHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951          312 -ISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       312 -~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                       .....++.++++++...++...++|+++.++++++++|+++..+++|+++++.|+++..
T Consensus        66 ~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   66 LAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             hHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence             44445589999999999999999999999999999999999999999999999998764

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.75  E-value=3.3e-07  Score=85.85  Aligned_cols=140  Identities=11%  Similarity=0.151  Sum_probs=103.5

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHH
Q 044951          219 FDTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMF  298 (375)
Q Consensus       219 ~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  298 (375)
                      -...|.++.++++++|+...+..|.. .         ++++.++.++...++.+++++.....+++......  ..++..
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~---------~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~--~~~~~~   72 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y---------YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL--IQTPQK   72 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-c---------CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH--HcCHHH
Confidence            34579999999999999999999753 2         37899999999988887776655433332221110  011222


Q ss_pred             HHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951          299 WVAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       299 ~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                      +...+..++.........++.++++++.+.++..+..|++++++++++++|+++..+++|+++.+.|+++..
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         73 IFMLAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            222233333333445555689999999999999999999999999999999999999999999999998753

>TIGR00688 rarD rarD protein

Probab=98.74  E-value=3.6e-07  Score=83.69  Aligned_cols=138  Identities=14%  Similarity=0.196  Sum_probs=104.1

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHh-HhcCcchhhHHHH
Q 044951          222 KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYV-MNTGVIELPMFWV  300 (375)
Q Consensus       222 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~  300 (375)
                      .|+.++++++++|+...+..|.. .         ++++.++.++-..++.+.+++.....+..... .+....+....+.
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~---------~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-K---------PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLIL   71 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-c---------cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHH
Confidence            48899999999999999998863 2         28999999999988887766654443332211 0111111111233


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951          301 AATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF  369 (375)
Q Consensus       301 ~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly  369 (375)
                      .+...|++........++.++++++.++++..+..|++++++++++++|+++..+++|.++.+.|+++-
T Consensus        72 ~~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li  140 (256)
T TIGR00688        72 SLLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISN  140 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH
Confidence            456666665555555568899999999999999999999999999999999999999999999998754

This uncharacterized protein is predicted to have many membrane-spanning domains.

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.73  E-value=4.6e-07  Score=82.93  Aligned_cols=131  Identities=15%  Similarity=0.079  Sum_probs=97.0

Q ss_pred             CCcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHH-
Q 044951           73 AVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLI-  151 (375)
Q Consensus        73 ~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  151 (375)
                      .+....+.+.+.|+..    ..+.|...++++.+ +.....+++.++.+++.+...... +....+.+.+...+..+++ 
T Consensus       128 ~G~~~~l~a~~~~a~~----~~~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  201 (260)
T TIGR00950       128 AGLLLGLGSGISFALG----TVLYKRLVKKEGPE-LLQFTGWVLLLGALLLLPFAWFLG-PNPQALSLQWGALLYLGLIG  201 (260)
T ss_pred             HHHHHHHHHHHHHHHH----HHHHhHHhhcCCch-HHHHHHHHHHHHHHHHHHHHHhcC-CCCCcchHHHHHHHHHHHHH
Confidence            3445556677777776    45678887644333 345555788888777766544322 1222344555555555554 


Q ss_pred             HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHh
Q 044951          152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISA  209 (375)
Q Consensus       152 ~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv  209 (375)
                      ......++++++++++++..+++.++.|++.+++++++++|+++..++.+..+++.|+
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            4678889999999999999999999999999999999999999999999999999986

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.61  E-value=8.6e-07  Score=82.34  Aligned_cols=132  Identities=10%  Similarity=0.094  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHH
Q 044951          224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAAT  303 (375)
Q Consensus       224 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  303 (375)
                      +++.+++++++|.+.+..||..++         .++  ..++......+..+|+...... ..  +.... ....|..++
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~---------~~~--~~~~~~~~~~~~l~~~~~~~~~-~~--~~~~~-~~~~~~~~~   67 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADK---------EPD--FLWWALLAHSVLLTPYGLWYLA-QV--GWSRL-PATFWLLLA   67 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCc---------hhH--HHHHHHHHHHHHHHHHHHHhcc-cC--CCCCc-chhhHHHHH
Confidence            578899999999999999976543         122  3455554555555554432110 00  01110 122234555


Q ss_pred             HHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951          304 ASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       304 ~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                      ..++......+..++.+++.++...++..+..|+++.+++++++||+++..+++|+++++.|+++-.
T Consensus        68 ~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~  134 (281)
T TIGR03340        68 ISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG  134 (281)
T ss_pred             HHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence            6666666666666788999999999999999999999999999999999999999999999998754

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.45  E-value=7e-06  Score=78.63  Aligned_cols=137  Identities=14%  Similarity=0.144  Sum_probs=104.3

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHH
Q 044951          222 KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVA  301 (375)
Q Consensus       222 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (375)
                      .-+..+++.-++|+.+.++.|..++.        .+++....++-..++.++++++....+.....   +.. +...|..
T Consensus        13 ~~~~~~~~~q~~~~~~~~~~k~a~~~--------G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~---~~~-~~~~~~~   80 (358)
T PLN00411         13 VFLTAMLATETSVVGISTLFKVATSK--------GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSL---PPL-SVSILSK   80 (358)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHC--------CCCccHHHHHHHHHHHHHHHHHHHHHHHhccc---Ccc-hHHHHHH
Confidence            34566778889999999999998864        48888988888888887777776543321110   110 1222345


Q ss_pred             HHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhh------ccCcCccchhhHHHHHHHhhHhhh
Q 044951          302 ATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVL------FNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       302 l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~------f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                      +...|++++..+...+..++++++..+++..+..|+++.++++++      ++|+++..+++|+++++.|+.+-.
T Consensus        81 l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~  155 (358)
T PLN00411         81 IGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI  155 (358)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence            566777774444455688999999999999999999999999999      699999999999999999987643

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.42  E-value=3.1e-06  Score=66.97  Aligned_cols=65  Identities=8%  Similarity=0.140  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951          150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI  214 (375)
Q Consensus       150 ~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~  214 (375)
                      +++.+..++...+++.+|++.+..+.++.++++.+.+++++|||+++++++++.++++|+++++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            45788899999999999999999999999999999999999999999999999999999988753

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.37  E-value=8e-06  Score=76.23  Aligned_cols=213  Identities=11%  Similarity=0.103  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc---c-cccc-----
Q 044951          150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT---D-LSFD-----  220 (375)
Q Consensus       150 ~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~---~-~~~~-----  220 (375)
                      +.+.+...+...|+.+.|.+..+-+.+.+.++.++++.+++|||++++.+.|+.+++.|+.++...   + ...+     
T Consensus        58 ~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t~~~l~  137 (300)
T PF05653_consen   58 LLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHTLDELI  137 (300)
T ss_pred             HHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCCHHHHH
Confidence            455677788899999999999999999999999999999999999999999999999999876542   1 1111     


Q ss_pred             ----hhh---HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhH-hcCc
Q 044951          221 ----TKG---YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVM-NTGV  292 (375)
Q Consensus       221 ----~~G---~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~  292 (375)
                          -.+   +........ ..+.....+|.    .      +-+..-.....+.++....+..-...+-..... ..+.
T Consensus       138 ~~~~~~~fl~y~~~~~~~~-~~L~~~~~~r~----g------~~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~~~  206 (300)
T PF05653_consen  138 ALLSQPGFLVYFILVLVLI-LILIFFIKPRY----G------RRNILVYISICSLIGSFTVLSAKAISILIKLTFSGDNQ  206 (300)
T ss_pred             HHhcCcceehhHHHHHHHH-HHHHHhhcchh----c------ccceEEEEEEeccccchhhhHHHHHHHHHHHHhcCchh
Confidence                012   111111111 11111111111    0      111111011111112111111100000011111 1122


Q ss_pred             chhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHhHHH-hhhhHHHHHhHHhhccC--cCccc----hhhHHHHHHHh
Q 044951          293 IELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYSLVG-SLNKIPISLAGLVLFNV--PLSVP----NMFSILFGLFA  365 (375)
Q Consensus       293 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~-~~~~v~~i~~~~~~f~e--~~t~~----~~iG~~l~l~G  365 (375)
                      ..++..|..++...+++....+...+.+++.+++...... .+-...+++.|.++|+|  ..+..    ...|..+++.|
T Consensus       207 f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G~~~ii~G  286 (300)
T PF05653_consen  207 FTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCGFLIIIIG  286 (300)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHh
Confidence            3455666665555555555555556788888766544443 33566888888999985  44553    35677778888


Q ss_pred             hHhhhhcc
Q 044951          366 GIFFARAK  373 (375)
Q Consensus       366 ~~ly~~~k  373 (375)
                      +.+-+..|
T Consensus       287 V~lL~~~~  294 (300)
T PF05653_consen  287 VFLLSSSK  294 (300)
T ss_pred             hheeeccC
Confidence            88776655

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.36  E-value=1.4e-05  Score=74.68  Aligned_cols=135  Identities=11%  Similarity=0.080  Sum_probs=95.8

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccc-cccCHHHHHHHHHHHHH-
Q 044951           74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSV-EKLNWKLIKLWIPVNLI-  151 (375)
Q Consensus        74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-  151 (375)
                      +....+.+.+.|...+    ..+|..-.    +.+...+.+|+.++.+.+.+......... ...+.+.+..+...+++ 
T Consensus       151 G~l~~l~a~~~~a~~~----~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~  222 (292)
T PRK11272        151 GAILILIASASWAFGS----VWSSRLPL----PVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFG  222 (292)
T ss_pred             HHHHHHHHHHHHHHHH----HHHHhcCC----CcchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHH
Confidence            3444555666666653    44565422    12445677888888776655543321111 11234445555555654 


Q ss_pred             HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc
Q 044951          152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD  216 (375)
Q Consensus       152 ~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~  216 (375)
                      ..+...++++++++++.+...++..+.|++.+++++++++|++++.++++.++++.|+.+....+
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~  287 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGK  287 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            45778899999999999999999999999999999999999999999999999999998876543

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.26  E-value=4.2e-05  Score=71.49  Aligned_cols=131  Identities=17%  Similarity=0.236  Sum_probs=89.6

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHH-HH
Q 044951           75 KSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLI-FI  153 (375)
Q Consensus        75 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  153 (375)
                      ....+.+.+.|...    .+..|...+  +.+ |.... ++.+++.+++..+...... ....++..+...+..+++ ..
T Consensus       150 ~ll~l~aa~~~a~~----~v~~r~~~~--~~~-~~~~~-~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~l~lgv~~t~  220 (293)
T PRK10532        150 AALALGAGACWAIY----ILSGQRAGA--EHG-PATVA-IGSLIAALIFVPIGALQAG-EALWHWSILPLGLAVAILSTA  220 (293)
T ss_pred             HHHHHHHHHHHHHH----HHHHHHHhc--cCC-chHHH-HHHHHHHHHHHHHHHHccC-cccCCHHHHHHHHHHHHHHHH
Confidence            33444555566554    456676655  334 55544 4555555555443333211 112233433333445554 45


Q ss_pred             HHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951          154 GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI  214 (375)
Q Consensus       154 ~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~  214 (375)
                      +...++++++++++.+.++++..++|++..++++++++|++++.++++.+++++|++....
T Consensus       221 ~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~  281 (293)
T PRK10532        221 LPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTL  281 (293)
T ss_pred             HHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHh
Confidence            6777899999999999999999999999999999999999999999999999999887654

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=98.24  E-value=3.5e-05  Score=69.73  Aligned_cols=140  Identities=15%  Similarity=0.246  Sum_probs=111.6

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHH
Q 044951          220 DTKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFW  299 (375)
Q Consensus       220 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  299 (375)
                      +..|+++++.+-+.|+..-.+.|-+.          ..++.++..+-.+.++++++.+......++...+  ..+.|..+
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~----------~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~--~~~~p~~~   72 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLE----------PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ--LLKQPKTL   72 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHc----------cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH--HHhCcHHH
Confidence            35799999999999999888887653          3788899999999999999888777788777654  23345444


Q ss_pred             HHHHHHhHHHHHHHHHHH-HHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          300 VAATASGFLGLAISFTSM-WFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       300 ~~l~~~~~~~~~~~~~~~-~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      ..+...++.- ..|...| |.+.+-....+|.--+.+|.+.+++|.++++|.++..|++.+++...|+..-.+.
T Consensus        73 ~~~~l~a~li-~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~  145 (293)
T COG2962          73 LMLALTALLI-GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWL  145 (293)
T ss_pred             HHHHHHHHHH-HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence            4444444333 3466666 7888888899999999999999999999999999999999999999999775543

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.24  E-value=3.8e-05  Score=71.82  Aligned_cols=129  Identities=11%  Similarity=0.077  Sum_probs=87.0

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHH
Q 044951           76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGM  155 (375)
Q Consensus        76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (375)
                      ...+.+.+.|...    .+++|..-++  .+ |....  ... ..+.+..............+++.+..++..++...+.
T Consensus       159 ~~~l~aa~~~A~~----~v~~k~~~~~--~~-~~~~~--~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~t~~~  228 (295)
T PRK11689        159 GLAFIGAFIWAAY----CNVTRKYARG--KN-GITLF--FIL-TALALWIKYFLSPQPAMVFSLPAIIKLLLAAAAMGFG  228 (295)
T ss_pred             HHHHHHHHHHHHH----HHHHhhccCC--CC-chhHH--HHH-HHHHHHHHHHHhcCccccCCHHHHHHHHHHHHHHHHH
Confidence            3445555666665    4566766543  34 44332  222 2222222112211112234455454455555556677


Q ss_pred             HHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951          156 LVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI  214 (375)
Q Consensus       156 ~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~  214 (375)
                      .+++++++++++++..+++.++.|++..++++++++|+++..++++.++++.|+.+...
T Consensus       229 ~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        229 YAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            88999999999999999999999999999999999999999999999999999877643

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.14  E-value=0.00011  Score=68.81  Aligned_cols=138  Identities=13%  Similarity=0.088  Sum_probs=92.1

Q ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHh-hCC-c----cccccCHHHHHHHHH
Q 044951           74 VKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGF-FGA-V----SVEKLNWKLIKLWIP  147 (375)
Q Consensus        74 ~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~-~~~-~----~~~~~~~~~~~~~~~  147 (375)
                      +....+.+.+.|...    .++.|....++.-+.......++++++.+.+..... ... .    +....+.+.+..++-
T Consensus       144 G~~l~l~aal~~a~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  219 (299)
T PRK11453        144 GFMLTLAAAFSWACG----NIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMY  219 (299)
T ss_pred             HHHHHHHHHHHHHHH----HHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHH
Confidence            344455566667666    456666554322222334445566555443332211 111 0    112334555555555


Q ss_pred             HHHH-HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951          148 VNLI-FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT  215 (375)
Q Consensus       148 ~~~~-~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~  215 (375)
                      ++++ ..+...+++.++++.+.+.+.++..++|++..++++++++|+++..++++.+++++|+.+...+
T Consensus       220 l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~  288 (299)
T PRK11453        220 LAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG  288 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence            6644 3567888999999999999999999999999999999999999999999999999999877543

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.08  E-value=0.00026  Score=59.16  Aligned_cols=119  Identities=18%  Similarity=0.272  Sum_probs=90.7

Q ss_pred             HHHHHHHhhc-----cCCChhHHHHHHHHHHHHHHHHHHHhh-CCccc----ccc-------CHHHHHHHHHHHHHHHHH
Q 044951           93 TLLNKVVLST-----YNFNAGISLMFYQNLISTLVVAVFGFF-GAVSV----EKL-------NWKLIKLWIPVNLIFIGM  155 (375)
Q Consensus        93 ~~~nK~~l~~-----~~f~~p~~l~~~q~~~~~l~l~~~~~~-~~~~~----~~~-------~~~~~~~~~~~~~~~~~~  155 (375)
                      ..+.|..+++     .+.+ |+.+.......+.+.+.+.... +..+.    ...       +.+.+..++..+++....
T Consensus        16 ~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (153)
T PF03151_consen   16 NVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIFLLILSGLLAFLY   94 (153)
T ss_pred             HHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHHHHHHHHHHHHHH
Confidence            4566777776     4666 7777777777777766655432 21110    000       123344455566777899


Q ss_pred             HHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhh
Q 044951          156 LVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG  212 (375)
Q Consensus       156 ~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~  212 (375)
                      ++..+..++++++-+++++.+...+++.+++.++++|+++..++.|+.+.++|+++-
T Consensus        95 n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   95 NLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            999999999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.07  E-value=0.00016  Score=58.72  Aligned_cols=121  Identities=20%  Similarity=0.262  Sum_probs=84.5

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHH
Q 044951          222 KGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVA  301 (375)
Q Consensus       222 ~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (375)
                      .|+++.+.+.++.+...++.|+-+++..      +.+.... .      .  ..... .             ..|   ..
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g------~~~~~~~-~------~--~~~~~-~-------------~~p---~~   49 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLP------LLSHAWD-F------I--AALLA-F-------------GLA---LR   49 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCC------CccchhH-H------H--HHHHH-H-------------hcc---HH
Confidence            4889999999999999999988765421      1111000 0      0  00000 0             011   12


Q ss_pred             HHHHhHHHHHHHHHHH-HHhhccCchhHhHHHhhhhHHHHHhHHh--hccCcCccchhhHHHHHHHhhHhhhhccc
Q 044951          302 ATASGFLGLAISFTSM-WFLQQTGPTTYSLVGSLNKIPISLAGLV--LFNVPLSVPNMFSILFGLFAGIFFARAKM  374 (375)
Q Consensus       302 l~~~~~~~~~~~~~~~-~~l~~~s~~t~si~~~~~~v~~i~~~~~--~f~e~~t~~~~iG~~l~l~G~~ly~~~k~  374 (375)
                      .++.|++++...+..+ ..+++.+...+...-....+...+.++.  +|||++|+.+++|+++++.|+++.+..+.
T Consensus        50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~  125 (129)
T PRK02971         50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT  125 (129)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence            4566777777777665 6899999998888888887777777774  89999999999999999999999876543

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.04  E-value=0.0069  Score=57.35  Aligned_cols=233  Identities=9%  Similarity=0.031  Sum_probs=139.2

Q ss_pred             cCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccc---c----HHHHHHHHHHHHH
Q 044951          137 LNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQ---N----QKVWTAMFLMIIS  208 (375)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~---~----~~~~~~l~l~~~G  208 (375)
                      .+.+.+..-+..|++....+.....+.+++.+|...-+ ..++.++..++..++++|..   +    .....+++++++|
T Consensus        68 ~~~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliG  147 (345)
T PRK13499         68 FSGSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIG  147 (345)
T ss_pred             cCHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHH
Confidence            34455556677788889999999999999999877654 66888888889888888754   2    3466889999999


Q ss_pred             hHhhcc----ccc--------ccc-hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHH
Q 044951          209 AVSGSI----TDL--------SFD-TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAM  275 (375)
Q Consensus       209 v~l~~~----~~~--------~~~-~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  275 (375)
                      +++.+.    .|.        +++ ..|+++++++.+.+++|......-+.-.+ .......++.....-+......-.+
T Consensus       148 i~l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~-~a~~~g~~~~~~~lp~~~~~~~G~~  226 (345)
T PRK13499        148 VAIVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHE-AAAALGVDPLYAALPSYVVIMGGGA  226 (345)
T ss_pred             HHHHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhh-hhhhcCCCchHHHHHHHHHHHHHHH
Confidence            999877    332        122 57999999999999999954433221100 0001234444333322221111111


Q ss_pred             HHH----HH---h-hhhhHhHhcCcchh--hHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHh----HHHhhhhHHHHH
Q 044951          276 FLI----LI---F-DEWRYVMNTGVIEL--PMFWVAATASGFLGLAISFTSMWFLQQTGPTTYS----LVGSLNKIPISL  341 (375)
Q Consensus       276 ~~~----~~---~-~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~s----i~~~~~~v~~i~  341 (375)
                      ...    ..   . +++....+...-+.  ..-.......|+..+..++.....-++.+.....    +...+.-+++.+
T Consensus       227 ~~n~~~~~~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistl  306 (345)
T PRK13499        227 ITNLGFCFIRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNL  306 (345)
T ss_pred             HHHHHHHHHHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHH
Confidence            111    10   0 11110111111000  1112344566666666666655555555333232    333566688888


Q ss_pred             hHHhhccCcCc------cchhhHHHHHHHhhHhhhh
Q 044951          342 AGLVLFNVPLS------VPNMFSILFGLFAGIFFAR  371 (375)
Q Consensus       342 ~~~~~f~e~~t------~~~~iG~~l~l~G~~ly~~  371 (375)
                      .|. +++|.-+      ...++|+++++.|.++-.+
T Consensus       307 wGi-~lkE~K~a~~k~~~~l~~G~vliI~g~~lig~  341 (345)
T PRK13499        307 WGL-VLKEWKGASRRPVRVLSLGCVVIILAANIVGL  341 (345)
T ss_pred             hhh-hhhhccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence            888 5998877      6678999999999887654

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.96  E-value=0.00033  Score=67.14  Aligned_cols=137  Identities=12%  Similarity=0.106  Sum_probs=99.0

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCC-chhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHH
Q 044951          221 TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLN-EVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFW  299 (375)
Q Consensus       221 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  299 (375)
                      +.-..+.+..-.+...+.+..|.+++.         .+ |+.+..++..++.....++.. .+ ....++.+.  ....|
T Consensus        48 ~~~~~~~~~wy~~s~~~~~~nK~vl~~---------~~~P~~l~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~--~~~~~  114 (350)
T PTZ00343         48 WKLALLFLTWYALNVLYVVDNKLALNM---------LPLPWTISSLQLFVGWLFALLYWA-TG-FRKIPRIKS--LKLFL  114 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHh---------CChhHHHHHHHHHHHHHHHHHHHH-hC-CCCCCCCCC--HHHHH
Confidence            333445555555556667788888764         67 899998888777665444322 11 111111111  12245


Q ss_pred             HHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951          300 VAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       300 ~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                      ..++..|+++....+..+..++++++..++++....|++++++++++++|+++..++.|+++++.|+.+-.
T Consensus       115 ~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~  185 (350)
T PTZ00343        115 KNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS  185 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence            56777888877766666788999999999999999999999999999999999999999999999998754

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=97.96  E-value=0.00011  Score=68.96  Aligned_cols=132  Identities=11%  Similarity=0.131  Sum_probs=88.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-CCccccccCH---------HHHHH-HH
Q 044951           78 PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-GAVSVEKLNW---------KLIKL-WI  146 (375)
Q Consensus        78 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~~~~~~~~~~---------~~~~~-~~  146 (375)
                      .+.+.+.|..-    .++.|...++.+.+ |..++.+++..+.+.+.+.... ...+....++         ..... .+
T Consensus       150 ~l~a~~~~a~~----~v~~k~~~~~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (302)
T TIGR00817       150 AMISNITFVSR----NIFSKKAMTIKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSL  224 (302)
T ss_pred             HHHHHHHHHHH----HHHHHHhhccCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHH
Confidence            33344444443    45677777633456 7888999998887766655432 2111100000         00111 11


Q ss_pred             HHHH-HHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951          147 PVNL-IFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI  214 (375)
Q Consensus       147 ~~~~-~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~  214 (375)
                      ..+. .+.+.+.+.+.++++++...+++.....|+++.++++++++|+++..+++|.+++++|+.+...
T Consensus       225 ~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       225 VAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            2222 3444456777899999999999999999999999999999999999999999999999887653

specificities overlap.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=97.86  E-value=0.00026  Score=56.23  Aligned_cols=71  Identities=23%  Similarity=0.301  Sum_probs=57.3

Q ss_pred             HHHHHhHHHHHHHHHH-HHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          301 AATASGFLGLAISFTS-MWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       301 ~l~~~~~~~~~~~~~~-~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      .++..|+++...++.. ++.+++.++ ..++...+.|+++.++|+++|+|+++..+++|.++++.|+++-.+.
T Consensus        36 ~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~  107 (113)
T PF13536_consen   36 WLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWS  107 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            3455556655344444 477888885 7778889999999999999999999999999999999999987654

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.77  E-value=0.00027  Score=57.38  Aligned_cols=68  Identities=9%  Similarity=0.101  Sum_probs=61.1

Q ss_pred             HHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHH--HhcccccHHHHHHHHHHHHHhHhhcccc
Q 044951          149 NLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELY--MFRKRQNQKVWTAMFLMIISAVSGSITD  216 (375)
Q Consensus       149 ~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~--~~~~~~~~~~~~~l~l~~~Gv~l~~~~~  216 (375)
                      -+++.+..++++.+++..|++.+.-+.+..++++.+.++.  ++||+++++++++++++++|++++..++
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            3567889999999999999999999999999888888875  8999999999999999999999987543

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.74  E-value=0.0005  Score=64.11  Aligned_cols=129  Identities=17%  Similarity=0.187  Sum_probs=89.8

Q ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHH----HHHHHHHHHHhhCCccccccCHHHHHHHHH
Q 044951           72 PAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNL----ISTLVVAVFGFFGAVSVEKLNWKLIKLWIP  147 (375)
Q Consensus        72 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~----~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~  147 (375)
                      +++....+++.+.|+..    ...+|..    +.+ |...++.|..    .+.++.... . +  . ++.+.+..+..+.
T Consensus       151 ~~Gi~~~l~sg~~y~~~----~~~~~~~----~~~-~~~~~~~~~~g~~~~~~~~~~~~-~-~--~-~~~~~~~~~~~~~  216 (290)
T TIGR00776       151 KKGILLLLMSTIGYLVY----VVVAKAF----GVD-GLSVLLPQAIGMVIGGIIFNLGH-I-L--A-KPLKKYAILLNIL  216 (290)
T ss_pred             hhHHHHHHHHHHHHHHH----HHHHHHc----CCC-cceehhHHHHHHHHHHHHHHHHH-h-c--c-cchHHHHHHHHHH
Confidence            34555555565555444    5667754    234 6666555544    333333322 1 1  1 1222333334455


Q ss_pred             HHHHHHHHHHHHhHhhc-ccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHhHhhcc
Q 044951          148 VNLIFIGMLVSGMYSLK-YINIAMVTILKNMTNILTAVGELYMFRKRQNQKVW----TAMFLMIISAVSGSI  214 (375)
Q Consensus       148 ~~~~~~~~~~~~~~al~-~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~----~~l~l~~~Gv~l~~~  214 (375)
                      .|++....+.++..+++ +.+++.+.++.+..|+...+.+.+++||+.+++++    ++.++++.|+.+...
T Consensus       217 ~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       217 PGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            77777777888889999 99999999999999999999999999999999999    999999999887653

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.72  E-value=0.0016  Score=60.03  Aligned_cols=131  Identities=13%  Similarity=0.190  Sum_probs=89.8

Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHH-HHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHH
Q 044951           75 KSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMF-YQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFI  153 (375)
Q Consensus        75 ~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~-~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (375)
                      ....+.+.+.|...    ...+|... +  .+ +..... +++........... ....+ .+.+.+.+......+++..
T Consensus       156 ~~~~l~a~~~~a~~----~~~~~~~~-~--~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~g~~~~  225 (292)
T COG0697         156 LLLALAAALLWALY----TALVKRLS-R--LG-PVTLALLLQLLLALLLLLLFF-LSGFG-APILSRAWLLLLYLGVFST  225 (292)
T ss_pred             HHHHHHHHHHHHHH----HHHHHHhc-C--CC-hHHHHHHHHHHHHHHHHHHHH-hcccc-ccCCHHHHHHHHHHHHHHH
Confidence            33445555566644    45667665 2  23 333444 55552222222221 22111 3345566666777776665


Q ss_pred             -HHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951          154 -GMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT  215 (375)
Q Consensus       154 -~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~  215 (375)
                       ....+.+++++..+++..+++..+.|++.++.++++++|+++.+++++..+++.|+.+....
T Consensus       226 ~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         226 GLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence             58889999999999999999999999999999999999999999999999999999887543

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=97.69  E-value=1e-05  Score=71.13  Aligned_cols=266  Identities=15%  Similarity=0.159  Sum_probs=172.9

Q ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHHHHH
Q 044951           76 SGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIFIGM  155 (375)
Q Consensus        76 ~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (375)
                      +.+++..+.|+..-   .+.||.--    =|+.-++   -+.++++++.+...+-  ..+..+.+.+..-+.-|.+..+.
T Consensus         5 liaL~P~l~WGsip---~v~~k~GG----~p~qQ~l---GtT~GALifaiiv~~~--~~p~~T~~~~iv~~isG~~Ws~G   72 (288)
T COG4975           5 LIALLPALGWGSIP---LVANKFGG----KPYQQTL---GTTLGALIFAIIVFLF--VSPELTLTIFIVGFISGAFWSFG   72 (288)
T ss_pred             HHHHHHHHHhcccc---eeeeecCC----ChhHhhh---hccHHHHHHHHHHhee--ecCccchhhHHHHHHhhhHhhhh
Confidence            34566777898774   34555332    2322111   1222333322221111  22344555555556667788888


Q ss_pred             HHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHH----HHHHHHHHHhHhhcccccc--------cchh
Q 044951          156 LVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVW----TAMFLMIISAVSGSITDLS--------FDTK  222 (375)
Q Consensus       156 ~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~----~~l~l~~~Gv~l~~~~~~~--------~~~~  222 (375)
                      +...+.|.+++.+|-+.=+ ..++.+-+-+++.+.++|..+..+.    .++++++.|+++-++.|.+        .--.
T Consensus        73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kk  152 (288)
T COG4975          73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKK  152 (288)
T ss_pred             hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhh
Confidence            9999999999988866543 4578888889999999999876654    6788889999998876531        1136


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHH
Q 044951          223 GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAA  302 (375)
Q Consensus       223 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  302 (375)
                      |+...+.|.+.|..|.++.+..           +.+.++..+-++.-+....+.+....+|...        ....| .-
T Consensus       153 gi~~L~iSt~GYv~yvvl~~~f-----------~v~g~saiLPqAiGMv~~ali~~~~~~~~~~--------~K~t~-~n  212 (288)
T COG4975         153 GIVILLISTLGYVGYVVLFQLF-----------DVDGLSAILPQAIGMVIGALILGFFKMEKRF--------NKYTW-LN  212 (288)
T ss_pred             heeeeeeeccceeeeEeeeccc-----------cccchhhhhHHHHHHHHHHHHHhhcccccch--------HHHHH-HH
Confidence            8888888999999998877654           3677777776665555555554443322111        11112 33


Q ss_pred             HHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchh----hHHHHHHHhhHhhhhcc
Q 044951          303 TASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNM----FSILFGLFAGIFFARAK  373 (375)
Q Consensus       303 ~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~----iG~~l~l~G~~ly~~~k  373 (375)
                      +..|+....-|...+..-++.+-.|.=...-+--+++++-|.++++|+-|..++    +|++++++|.++....|
T Consensus       213 ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~~K  287 (288)
T COG4975         213 IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGIAK  287 (288)
T ss_pred             HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhheec
Confidence            566777666777766666666655555555666788999999999999998764    67888888887776655

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=97.59  E-value=0.00043  Score=54.71  Aligned_cols=63  Identities=19%  Similarity=0.175  Sum_probs=52.3

Q ss_pred             HHHHHHHHHH-HHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951          308 LGLAISFTSM-WFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       308 ~~~~~~~~~~-~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                      +.+...+..+ ..+++.+...+...-.+.++.+.++|+++|||+++..+++|+++++.|+++-.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3343344333 67888888888888889999999999999999999999999999999998754

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.58  E-value=0.00061  Score=54.35  Aligned_cols=71  Identities=8%  Similarity=0.102  Sum_probs=62.7

Q ss_pred             HHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951          145 WIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT  215 (375)
Q Consensus       145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~  215 (375)
                      ....-+++....++...+++++|++.+-.+ .....+.+.+.+.++++|++++.+++++.++++|++++...
T Consensus        33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            455667788899999999999999987777 46899999999999999999999999999999999887554

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.54  E-value=0.0026  Score=49.87  Aligned_cols=68  Identities=18%  Similarity=0.200  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhh
Q 044951          145 WIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG  212 (375)
Q Consensus       145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~  212 (375)
                      ....-+++....++-..+++++|++.+-.+ .....+.+.+.+.+++||++++.+++++.+++.|++.+
T Consensus        38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            444456677888888999999999976655 55888999999999999999999999999999999875

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.50  E-value=0.0021  Score=50.61  Aligned_cols=70  Identities=11%  Similarity=0.152  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951          146 IPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT  215 (375)
Q Consensus       146 ~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~  215 (375)
                      ...-+++....++...+++.+|++.+-.+ ....-+.+.+.+++++||++++.+++++.++++|++++...
T Consensus        34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34456677888888999999999988777 45788999999999999999999999999999999988553

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.48  E-value=0.002  Score=49.81  Aligned_cols=71  Identities=11%  Similarity=0.050  Sum_probs=60.2

Q ss_pred             HHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951          145 WIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT  215 (375)
Q Consensus       145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~  215 (375)
                      ....-+++..+.++-..|+|++|++.+-.+ .....+.+.+.+++++||+.+..+++++.++++|++.+-..
T Consensus        33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            344556778888888999999999976544 67889999999999999999999999999999999887543

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.46  E-value=0.0026  Score=49.58  Aligned_cols=69  Identities=7%  Similarity=0.099  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhc
Q 044951          145 WIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGS  213 (375)
Q Consensus       145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~  213 (375)
                      ....-+++....++-..+++.+|++.+-.+ .....+.+.+.+.+++||+.++.+++++.++++|++.+.
T Consensus        32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            344456778888888999999999976665 558899999999999999999999999999999998864

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=97.36  E-value=0.0095  Score=55.92  Aligned_cols=136  Identities=16%  Similarity=0.183  Sum_probs=94.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh---CC-ccccc---cCHHHHHHHHHHHH
Q 044951           78 PLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF---GA-VSVEK---LNWKLIKLWIPVNL  150 (375)
Q Consensus        78 ~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~---~~-~~~~~---~~~~~~~~~~~~~~  150 (375)
                      +++..++...+......+.+.++++++.+ |....++..+++.+...+....   +. .+..+   .....+..++..++
T Consensus       155 G~~ll~~sl~~~a~~~~~qe~~~~~~~~~-~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~  233 (303)
T PF08449_consen  155 GIILLLLSLLLDAFTGVYQEKLFKKYGKS-PWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL  233 (303)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCc-HHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH
Confidence            33333344444444467889999988877 7777777777776655543332   11 01001   11123444555566


Q ss_pred             HHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951          151 IFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI  214 (375)
Q Consensus       151 ~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~  214 (375)
                      .....+..-+...+..+.-..+++..+--+++.+++.+++++++++.+|.|+++.+.|..+-..
T Consensus       234 ~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~  297 (303)
T PF08449_consen  234 TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSY  297 (303)
T ss_pred             HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHH
Confidence            6666666667778889999999999999999999999999999999999999999999877544

; GO: 0055085 transmembrane transport

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.29  E-value=0.0025  Score=58.62  Aligned_cols=209  Identities=12%  Similarity=0.143  Sum_probs=118.1

Q ss_pred             HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccccc---c-c-----
Q 044951          150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDLS---F-D-----  220 (375)
Q Consensus       150 ~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~~---~-~-----  220 (375)
                      +.+.+.-..++.|+.+-|.+..+-+-+++.++.++++..+++||.++.-.+++.++++|..+++...++   . +     
T Consensus        72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~~el~  151 (335)
T KOG2922|consen   72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESVEEVW  151 (335)
T ss_pred             HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccHHHHH
Confidence            456777888889999999999999999999999999999999999999999999999998887664211   1 0     


Q ss_pred             ----hhhH---HHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHH-HHH-Hhhh-hhHh-Hh
Q 044951          221 ----TKGY---AWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMF-LIL-IFDE-WRYV-MN  289 (375)
Q Consensus       221 ----~~G~---~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~-~~~~-~~~~-~~  289 (375)
                          -.|+   ...+.-.++.-.+  ..+   ++      +...|   ++.|..+.+..-.+- .+. ..+. .... ..
T Consensus       152 ~~~~~~~Fliy~~~iil~~~il~~--~~~---p~------~g~tn---ilvyi~i~s~iGS~tV~svKalg~aiklt~~g  217 (335)
T KOG2922|consen  152 ELATEPGFLVYVIIIILIVLILIF--FYA---PR------YGQTN---ILVYIGICSLIGSLTVMSVKALGIAIKLTFSG  217 (335)
T ss_pred             HHhcCccHHHHHHHHHHHHHHHhe--eec---cc------ccccc---eeehhhHhhhhcceeeeeHHHHHHHHHHHhcC
Confidence                0122   1111111111111  111   11      11122   233333222221100 000 0111 1111 11


Q ss_pred             cCcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhHh-HHHhhhhHHHHHhHHhhccC--cCccch----hhHHHHH
Q 044951          290 TGVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTYS-LVGSLNKIPISLAGLVLFNV--PLSVPN----MFSILFG  362 (375)
Q Consensus       290 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~s-i~~~~~~v~~i~~~~~~f~e--~~t~~~----~iG~~l~  362 (375)
                      ......|..|..++....+.........++++..++...+ +...+=+..++..|.++|.|  ..+..+    ..|+..+
T Consensus       218 ~~ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti  297 (335)
T KOG2922|consen  218 NNQLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTI  297 (335)
T ss_pred             CcccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHh
Confidence            2233455566555555444443333334677765444444 34455677888889999974  444444    4566777


Q ss_pred             HHhhHhhhhc
Q 044951          363 LFAGIFFARA  372 (375)
Q Consensus       363 l~G~~ly~~~  372 (375)
                      +.|+.+.+..
T Consensus       298 ~~G~flL~~~  307 (335)
T KOG2922|consen  298 FLGIFLLHRT  307 (335)
T ss_pred             hheeeEeeee
Confidence            7777765443

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.21  E-value=0.0098  Score=56.25  Aligned_cols=138  Identities=14%  Similarity=0.196  Sum_probs=89.2

Q ss_pred             CCCCCcchhhHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHH---HHHHHHHHHHHHHHHhhCCccccccCH--HHHHH
Q 044951           70 HGPAVKSGPLISGTAYCISSCSMTLLNKVVLSTYNFNAGISLM---FYQNLISTLVVAVFGFFGAVSVEKLNW--KLIKL  144 (375)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~---~~q~~~~~l~l~~~~~~~~~~~~~~~~--~~~~~  144 (375)
                      +...+....+.+..+|+..+    ++.|+.+.+  .|..-.+.   .+.++++.+.+.++.+.   +.++.+|  +....
T Consensus       165 ~~i~GDll~l~~a~lya~~n----V~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~ile~~---~i~~~~w~~~~~~~  235 (334)
T PF06027_consen  165 NPILGDLLALLGAILYAVSN----VLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAILERS---GIESIHWTSQVIGL  235 (334)
T ss_pred             ccchhHHHHHHHHHHHHHHH----HHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHheehh---hhhccCCChhhHHH
Confidence            44566777888888999885    466888774  34222222   23333433333332222   2333333  22222


Q ss_pred             HHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc
Q 044951          145 WIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD  216 (375)
Q Consensus       145 ~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~  216 (375)
                      +...++.......+....++..++.+..+--.++.++.++++.+++|+++++.-+++.+++++|.++....+
T Consensus       236 ~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  236 LVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            222233333333344567888888888888889999999999999999999999999999999999887654

Some of the sequences in this family are annotated as putative membrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=97.08  E-value=0.025  Score=46.51  Aligned_cols=131  Identities=13%  Similarity=0.166  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHHH
Q 044951          224 YAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAAT  303 (375)
Q Consensus       224 ~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~  303 (375)
                      .++++.+..+.+++.....|+-++.        -+++...+.+...+...+.......++. ..   ....... | ...
T Consensus         3 ~lla~~aG~~i~~q~~~N~~L~~~~--------gs~~~as~i~~~~G~i~~~i~~~~~~~~-~~---~~~~~~p-~-w~~   68 (138)
T PF04657_consen    3 ILLALLAGALIALQAAFNGQLGKAL--------GSPLVASFISFGVGFILLLIILLITGRP-SL---ASLSSVP-W-WAY   68 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHh--------CccHHHHHHHHHHHHHHHHHHHHHhccc-cc---chhccCC-h-HHh
Confidence            5677888888888888888875541        2488888888888888877776665543 21   1221111 1 234


Q ss_pred             HHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHh--hc---cCcCccchhhHHHHHHHhhHh
Q 044951          304 ASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLV--LF---NVPLSVPNMFSILFGLFAGIF  368 (375)
Q Consensus       304 ~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~--~f---~e~~t~~~~iG~~l~l~G~~l  368 (375)
                      ..|+++....++....+.+.++.+.......-.+...++=..  +|   .+++++..++|.++.+.|+++
T Consensus        69 lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   69 LGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             ccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            588888888888888899999998888776655544443333  23   389999999999999999864

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.90  E-value=0.047  Score=48.75  Aligned_cols=126  Identities=15%  Similarity=0.125  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccCHHHHHHHHHHHHHH-HHHHHHHhHh
Q 044951           84 AYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLNWKLIKLWIPVNLIF-IGMLVSGMYS  162 (375)
Q Consensus        84 ~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a  162 (375)
                      .-+.++....+..|.+-+  .-+ ...-+..-+.++.++...+..... ...-+++.....-+.++++. .+-..+...+
T Consensus       155 ~AG~~Wa~YIv~G~r~g~--~~~-g~~g~a~gm~vAaviv~Pig~~~a-g~~l~~p~ll~laLgvavlSSalPYsLEmiA  230 (292)
T COG5006         155 GAGACWALYIVLGQRAGR--AEH-GTAGVAVGMLVAALIVLPIGAAQA-GPALFSPSLLPLALGVAVLSSALPYSLEMIA  230 (292)
T ss_pred             HHhHHHHHHHHHcchhcc--cCC-CchHHHHHHHHHHHHHhhhhhhhc-chhhcChHHHHHHHHHHHHhcccchHHHHHH
Confidence            334444444666666653  223 233456677777777766543221 11112222233333334433 3446788899


Q ss_pred             hcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhc
Q 044951          163 LKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGS  213 (375)
Q Consensus       163 l~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~  213 (375)
                      ++.+|...+.++-++.|.+-++.++++++|.++..+|+++..++.+++-..
T Consensus       231 L~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         231 LRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             HhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence            999999999999999999999999999999999999999999988876443

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.74  E-value=0.015  Score=44.25  Aligned_cols=58  Identities=9%  Similarity=0.104  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHHHhHhhcccchhHHHH-HHHHHHHHHHHHHHHHhcccccHHHHHHHHHH
Q 044951          148 VNLIFIGMLVSGMYSLKYINIAMVTI-LKNMTNILTAVGELYMFRKRQNQKVWTAMFLM  205 (375)
Q Consensus       148 ~~~~~~~~~~~~~~al~~~~vs~~~i-l~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~  205 (375)
                      .-.++....++...+++++|++.+-. ......+.+.+.+.+++||+.++.+++++.++
T Consensus        35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            34478888899999999999998754 46699999999999999999999999998763

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.74  E-value=0.0062  Score=55.24  Aligned_cols=73  Identities=11%  Similarity=0.141  Sum_probs=67.0

Q ss_pred             HHHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          300 VAATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       300 ~~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      ......+++-.+.|...|..+++.+|.+..+....|.+.+.++++++++.+++..||+++++.+.|+.+....
T Consensus        18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~   90 (244)
T PF04142_consen   18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS   90 (244)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence            4567888888888999999999999999999999999999999999999999999999999999999886553

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.62  E-value=0.013  Score=46.17  Aligned_cols=66  Identities=15%  Similarity=0.202  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHH-HHhhccCch-hHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          307 FLGLAISFTSM-WFLQQTGPT-TYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       307 ~~~~~~~~~~~-~~l~~~s~~-t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      +.++.+.+..+ ..+++.+-. .+++..-+..+.+++.|+++|||++++.+++|+.+++.|++.-+..
T Consensus        37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~  104 (110)
T PRK09541         37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL  104 (110)
T ss_pred             HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            33444444433 456666433 4556666788999999999999999999999999999999987653

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=96.55  E-value=0.079  Score=48.37  Aligned_cols=68  Identities=16%  Similarity=0.258  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHH----HHHHHHHHhH
Q 044951          143 KLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWT----AMFLMIISAV  210 (375)
Q Consensus       143 ~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~----~l~l~~~Gv~  210 (375)
                      +.=...|+++...+.+...|.+...++.+-.+.++.++...+.+.+++||+-+++++.    +++++++|.+
T Consensus       196 ~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  196 WKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             HHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            3446678888888999999999999999999999999999999999999998887664    4444445543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.48  E-value=0.018  Score=44.61  Aligned_cols=55  Identities=18%  Similarity=0.263  Sum_probs=46.9

Q ss_pred             HHhhccC-chhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          318 WFLQQTG-PTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       318 ~~l~~~s-~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      +.+|+.+ .+.+++..-.-.+.+.+.|+++|||++++.+++|+.+++.|++.-+..
T Consensus        49 ~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~  104 (106)
T COG2076          49 LALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLG  104 (106)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhc
Confidence            4566653 345788888889999999999999999999999999999999987654

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=96.34  E-value=0.022  Score=45.49  Aligned_cols=65  Identities=14%  Similarity=0.270  Sum_probs=47.9

Q ss_pred             HHHHHHHHHH-HHhhccCc-hhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          308 LGLAISFTSM-WFLQQTGP-TTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       308 ~~~~~~~~~~-~~l~~~s~-~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      ..+...+..+ +.+++.+. +.+++..-+-.+.+++.|+++|||++|+.+++|+++++.|++.-+..
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~  104 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG  104 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence            3333333333 45665543 34555566788899999999999999999999999999999887653

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.25  E-value=0.11  Score=40.80  Aligned_cols=53  Identities=17%  Similarity=0.258  Sum_probs=45.0

Q ss_pred             HHhhccC-chhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951          318 WFLQQTG-PTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       318 ~~l~~~s-~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                      ..+|+.+ .+.+++..-+-.+.+++.|+++|||++++.+++|+.+++.|++.-+
T Consensus        54 ~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk  107 (109)
T PRK10650         54 QAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK  107 (109)
T ss_pred             HHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence            4566654 3457778888889999999999999999999999999999998754

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.22  E-value=0.086  Score=41.05  Aligned_cols=55  Identities=16%  Similarity=0.297  Sum_probs=46.6

Q ss_pred             HHhhccC-chhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          318 WFLQQTG-PTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       318 ~~l~~~s-~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      ..+++.+ .+.+++..-+-.+.+++.|+++|||++++.+++|+.+++.|++.-+..
T Consensus        48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~  103 (105)
T PRK11431         48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLS  103 (105)
T ss_pred             HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhcc
Confidence            4566554 346788888899999999999999999999999999999999886543

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=96.05  E-value=0.0027  Score=56.78  Aligned_cols=69  Identities=10%  Similarity=0.160  Sum_probs=57.3

Q ss_pred             HHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951          302 ATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       302 l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                      +++=|+.++...+..|+..++.|-.-+++.....|+++++++|++++|+.|..+.+|..+.+.|+++..
T Consensus       100 LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv  168 (346)
T KOG4510|consen  100 LILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV  168 (346)
T ss_pred             EEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence            344555555555666677777777778888999999999999999999999999999999999998754

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.93  E-value=0.024  Score=44.62  Aligned_cols=70  Identities=16%  Similarity=0.186  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhh
Q 044951          142 IKLWIPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSG  212 (375)
Q Consensus       142 ~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~  212 (375)
                      ++...|..+- ......+++.+...++|.+.-+ .+++-+||++.++++.+|..+++.++++++++.|+.+.
T Consensus        42 ~~y~ipf~lN-q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   42 PKYIIPFLLN-QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            4445555543 3445566778889999988777 59999999999988888888999999999999998764

Many members are annotated as potential transmembrane proteins.

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=95.45  E-value=0.83  Score=37.51  Aligned_cols=116  Identities=12%  Similarity=0.068  Sum_probs=76.0

Q ss_pred             HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCc-cccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccchhHH
Q 044951           93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAV-SVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMV  171 (375)
Q Consensus        93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~  171 (375)
                      ..+|-.+-+..+  .|+.-+++-+..+.+.+.++...... +.+..+.-.++ ....|++-.....+...+...+.++..
T Consensus        17 ~~~N~~L~~~~g--s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w-~~lGG~lG~~~V~~~~~~vp~lG~~~~   93 (138)
T PF04657_consen   17 AAFNGQLGKALG--SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWW-AYLGGLLGVFFVLSNIILVPRLGAALT   93 (138)
T ss_pred             HHHHHHHHHHhC--ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChH-HhccHHHHHHHHHHHHHHhhhhhHHHH
Confidence            445555444333  37777888888887776655443322 22222111233 333567777888888899999998877


Q ss_pred             HHH-HHHHHHHHHHHHHH----HhcccccHHHHHHHHHHHHHhHh
Q 044951          172 TIL-KNMTNILTAVGELY----MFRKRQNQKVWTAMFLMIISAVS  211 (375)
Q Consensus       172 ~il-~~~~pvfv~l~~~~----~~~~~~~~~~~~~l~l~~~Gv~l  211 (375)
                      +.+ -.-+.+..++++.+    .-|+++++++.++++++++|+.+
T Consensus        94 ~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   94 TILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            766 44566666677765    35678999999999999999864

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=95.40  E-value=0.56  Score=44.12  Aligned_cols=115  Identities=13%  Similarity=0.201  Sum_probs=83.7

Q ss_pred             CCCCchhHHHHHhhhHHHHHHHHHHHhhh---hhHh-Hhc--CcchhhHHHHHHHHHhHHHHHHHHHHHHHhhccCchhH
Q 044951          255 GSLNEVSMVLLNNLLSLPFAMFLILIFDE---WRYV-MNT--GVIELPMFWVAATASGFLGLAISFTSMWFLQQTGPTTY  328 (375)
Q Consensus       255 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~-~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~t~  328 (375)
                      .+..+.+..+....+-.++.....+. ++   ++.. ...  .-+..+..-.-+...+++-.+-|...|..+.+.+|.|+
T Consensus        43 ~~f~~tt~v~~~Ei~Kl~~c~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaaty  121 (345)
T KOG2234|consen   43 PMFLPTTAVFLTEVIKLVFCLFLLLF-EERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAATY  121 (345)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHH-HhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchhh
Confidence            34667777777777766666554443 32   1111 111  11222322245566667777778777788999999999


Q ss_pred             hHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhh
Q 044951          329 SLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFA  370 (375)
Q Consensus       329 si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~  370 (375)
                      ++...+|-..+.+++++++++.++..||...++-++|+.+-+
T Consensus       122 qVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ  163 (345)
T KOG2234|consen  122 QVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ  163 (345)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999998866

>PRK13499 rhamnose-proton symporter; Provisional

Probab=95.26  E-value=0.27  Score=46.68  Aligned_cols=135  Identities=10%  Similarity=0.060  Sum_probs=84.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHH--HHHHH---HHHhhhhhHhHhcCcchh
Q 044951          221 TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLP--FAMFL---ILIFDEWRYVMNTGVIEL  295 (375)
Q Consensus       221 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~---~~~~~~~~~~~~~~~~~~  295 (375)
                      ..|+++.+++++|++.+.+-.||. +          --+|+..+.  ..++.  +..|+   .+..++..+.  ..+. +
T Consensus         6 ~~G~~~~~i~~~~~GS~~~p~K~~-k----------~w~wE~~W~--v~gi~~wl~~~~~~g~~~~~~f~~~--~~~~-~   69 (345)
T PRK13499          6 ILGIIWHLIGGASSGSFYAPFKKV-K----------KWSWETMWS--VGGIFSWLILPWLIAALLLPDFWAY--YSSF-S   69 (345)
T ss_pred             HHHHHHHHHHHHHhhccccccccc-C----------CCchhHHHH--HHHHHHHHHHHHHHHHHHhhhHHHH--HHhc-C
Confidence            479999999999999988877763 1          234444422  11111  11121   1111122211  1122 3


Q ss_pred             hHHHHHHHHHhHHHHHHHHHHHHHhhccCch-hHhHHHhhhhHHHHHhHHhhccCcC-------ccchhhHHHHHHHhhH
Q 044951          296 PMFWVAATASGFLGLAISFTSMWFLQQTGPT-TYSLVGSLNKIPISLAGLVLFNVPL-------SVPNMFSILFGLFAGI  367 (375)
Q Consensus       296 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~s~~-t~si~~~~~~v~~i~~~~~~f~e~~-------t~~~~iG~~l~l~G~~  367 (375)
                      +..+..-.++|++.-.-+...+..+++.+.. +..+..-+.-+..++++.+++||-.       ....++|+++++.|++
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            4445566778888777777777777777554 3444456678889999999998533       3457889999999999


Q ss_pred             hhhh
Q 044951          368 FFAR  371 (375)
Q Consensus       368 ly~~  371 (375)
                      +-.+
T Consensus       150 l~s~  153 (345)
T PRK13499        150 IVGR  153 (345)
T ss_pred             HHHH
Confidence            8776

>TIGR00803 nst UDP-galactose transporter

Probab=95.22  E-value=0.27  Score=43.71  Aligned_cols=62  Identities=11%  Similarity=0.247  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHh
Q 044951          150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVS  211 (375)
Q Consensus       150 ~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l  211 (375)
                      +.......+-.+.+++.+..+.++...+.++++.+++.++++++++..++.+..+.+.|+.+
T Consensus       160 ~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       160 LLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            44455556677889999999999999999999999999999999999999999999988653

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=94.77  E-value=0.1  Score=39.74  Aligned_cols=54  Identities=22%  Similarity=0.381  Sum_probs=28.4

Q ss_pred             HHHHHHHHH-HHhhccCchh-HhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHH
Q 044951          309 GLAISFTSM-WFLQQTGPTT-YSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFG  362 (375)
Q Consensus       309 ~~~~~~~~~-~~l~~~s~~t-~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~  362 (375)
                      ++..++..+ +.+++.+... +.+..-+..+.+.+.|+++|||++|+.+++|++++
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            444444433 5677765443 45666678899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=94.51  E-value=0.28  Score=45.97  Aligned_cols=115  Identities=14%  Similarity=0.200  Sum_probs=76.6

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHH
Q 044951          221 TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWV  300 (375)
Q Consensus       221 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  300 (375)
                      ..|..+++.++++.+....+.||-..+.++.    +...-+.                    ..      +.+.++..|.
T Consensus         6 ~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~----~~~~~~~--------------------~~------~~l~~~~W~~   55 (300)
T PF05653_consen    6 YIGVLLAVVSSIFIAVGFNLQKKSHLRLPRG----SLRAGSG--------------------GR------SYLRRPLWWI   55 (300)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----cccccch--------------------hh------HHHhhHHHHH
Confidence            5799999999999999998888876543210    0110000                    00      0011122233


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhh
Q 044951          301 AATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFF  369 (375)
Q Consensus       301 ~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly  369 (375)
                      .++.. .++...++.   .+...+++..+..+.+.-+...+++..+++|+++..++.|.++++.|..+-
T Consensus        56 G~~~~-~~g~~~~~~---Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li  120 (300)
T PF05653_consen   56 GLLLM-VLGEILNFV---ALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI  120 (300)
T ss_pred             HHHHH-hcchHHHHH---HHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
Confidence            33222 234334433   445556777888899999999999999999999999999999999998753

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.45  E-value=0.22  Score=47.12  Aligned_cols=141  Identities=15%  Similarity=0.092  Sum_probs=92.6

Q ss_pred             CCCcchhhHHHHHHHHHHHHHHHHHHHHhhcc--CCChhHHHHHHHHHHHHHHHH----HHHhhCCccccccCHHHHHHH
Q 044951           72 PAVKSGPLISGTAYCISSCSMTLLNKVVLSTY--NFNAGISLMFYQNLISTLVVA----VFGFFGAVSVEKLNWKLIKLW  145 (375)
Q Consensus        72 ~~~~~~~~~~~~~~~~~s~~~~~~nK~~l~~~--~f~~p~~l~~~q~~~~~l~l~----~~~~~~~~~~~~~~~~~~~~~  145 (375)
                      ..+.+.+++.+++|++-.    ++-|.=.++.  +.+-|.++.++- ++..++++    ++...+..+++-++..+...+
T Consensus       246 llG~llaL~sA~~YavY~----vllk~~~~~eg~rvdi~lffGfvG-LfnllllwP~l~iL~~~~~e~F~lP~~~q~~~v  320 (416)
T KOG2765|consen  246 LLGNLLALLSALLYAVYT----VLLKRKIGDEGERVDIQLFFGFVG-LFNLLLLWPPLIILDFFGEERFELPSSTQFSLV  320 (416)
T ss_pred             hHHHHHHHHHHHHHHHHH----HHHHhhcccccccccHHHHHHHHH-HHHHHHHhHHHHHHHHhccCcccCCCCceeEee
Confidence            344555666777777663    3335544544  456666665544 22333333    233333322222222233333


Q ss_pred             HHHH-HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccccc
Q 044951          146 IPVN-LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITDL  217 (375)
Q Consensus       146 ~~~~-~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~~  217 (375)
                      +..+ +...+.=+++.+|.-.++.-..++--+.+.+..++...++.++++++..++|.+++++|-+++...+.
T Consensus       321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            3333 34567788888999999988999999999999999999999999999999999999999988877543

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=94.34  E-value=0.14  Score=47.98  Aligned_cols=134  Identities=14%  Similarity=0.144  Sum_probs=94.6

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhh--ccCCChhHHHHHHHHHHHHHHHH-HHHhh--CCcc----ccccCHHHHHHHHHHH
Q 044951           79 LISGTAYCISSCSMTLLNKVVLS--TYNFNAGISLMFYQNLISTLVVA-VFGFF--GAVS----VEKLNWKLIKLWIPVN  149 (375)
Q Consensus        79 ~~~~~~~~~~s~~~~~~nK~~l~--~~~f~~p~~l~~~q~~~~~l~l~-~~~~~--~~~~----~~~~~~~~~~~~~~~~  149 (375)
                      ...+..+......-.++.|.++.  ++..+ ++.+...+.-++...+. ++...  +...    ....+.. ...+...+
T Consensus       165 ~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s  242 (316)
T KOG1441|consen  165 FISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILLLNS  242 (316)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHHHHH
Confidence            34444455555555677788884  45677 67777777667766666 33222  2111    1122222 33344445


Q ss_pred             HHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcc
Q 044951          150 LIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSI  214 (375)
Q Consensus       150 ~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~  214 (375)
                      ++..+.+...+..+..++.=++++.....-+++...++++++++.++.+.+|.+++++|+.+-..
T Consensus       243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~  307 (316)
T KOG1441|consen  243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR  307 (316)
T ss_pred             HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence            77778888999999999999999999999999999999999999999999999999999987643

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.28  E-value=1.9  Score=35.76  Aligned_cols=140  Identities=19%  Similarity=0.203  Sum_probs=86.4

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHH
Q 044951          221 TKGYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWV  300 (375)
Q Consensus       221 ~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  300 (375)
                      +..++.++++..+...+.-...|+.+..        -+|.-..+.+...+...++.+....++.... + ...+.|  | 
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~--------~spl~As~isf~vGt~~L~~l~l~~~~~~~~-a-~~~~~p--w-   70 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYL--------GSPLLASLISFLVGTVLLLILLLIKQGHPGL-A-AVASAP--W-   70 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHc--------CChHHHHHHHHHHHHHHHHHHHHHhcCCCch-h-hccCCc--h-
Confidence            3456778888888888888887776542        2466666666667776666655543322211 1 011112  2 


Q ss_pred             HHHHHhHHHHHHHHHHHHHhhccCchhHhHHHhhhhH-HHHHhHHh-hcc---CcCccchhhHHHHHHHhhHhhhhcc
Q 044951          301 AATASGFLGLAISFTSMWFLQQTGPTTYSLVGSLNKI-PISLAGLV-LFN---VPLSVPNMFSILFGLFAGIFFARAK  373 (375)
Q Consensus       301 ~l~~~~~~~~~~~~~~~~~l~~~s~~t~si~~~~~~v-~~i~~~~~-~f~---e~~t~~~~iG~~l~l~G~~ly~~~k  373 (375)
                      .....|+++...-.+......+.++++...+...-.. .+.++.-. .||   .+++...++|+++++.|+++....+
T Consensus        71 W~~~GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~~  148 (150)
T COG3238          71 WAWIGGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRFG  148 (150)
T ss_pred             HHHHccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhcccc
Confidence            2345667777766776677888888766665544333 33333322 122   7899999999999999966655544

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=92.82  E-value=2.6  Score=37.16  Aligned_cols=126  Identities=18%  Similarity=0.288  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-CCcccc----ccCHHHHHHHHHHHHHHHHH
Q 044951           81 SGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-GAVSVE----KLNWKLIKLWIPVNLIFIGM  155 (375)
Q Consensus        81 ~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~  155 (375)
                      +...-+.++....+.-|...+-.+|. -...+++..+++..++..+... ......    .++-.....++.-|++-.+.
T Consensus       159 Wm~~NclssaafVL~mrkri~ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgi  237 (309)
T COG5070         159 WMFTNCLSSAAFVLIMRKRIKLTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGI  237 (309)
T ss_pred             EEehhhHhHHHHHHHHHHhhcccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhh
Confidence            33344555555555555555444565 4567788888888877766543 111111    22333455566777888888


Q ss_pred             HHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHH
Q 044951          156 LVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMII  207 (375)
Q Consensus       156 ~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~  207 (375)
                      .++.-++++.++...+.|..++.-...++.+.++++++.++..+.++++++.
T Consensus       238 Sy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfl  289 (309)
T COG5070         238 SYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFL  289 (309)
T ss_pred             hhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999988877755443

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=92.15  E-value=3.7  Score=37.97  Aligned_cols=118  Identities=12%  Similarity=0.154  Sum_probs=74.1

Q ss_pred             HHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhh-C-C---ccccccCHHHHHHHHHHHHHHHHHHHHHhHhhcccc
Q 044951           93 TLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFF-G-A---VSVEKLNWKLIKLWIPVNLIFIGMLVSGMYSLKYIN  167 (375)
Q Consensus        93 ~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~-~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~  167 (375)
                      +...+.++..++.. ++.+++.-.++..+.-...... + .   .++-+..++-++.++..+.+-+..+.+-++-++.-.
T Consensus       188 n~tQd~lf~~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~FI~~TI~~FG  266 (327)
T KOG1581|consen  188 NATQDSLFKKYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLFIFYTIERFG  266 (327)
T ss_pred             HhHHHHHhccCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhheehhhHhhcc
Confidence            44567777766555 4555544444433333222111 1 0   112222345677888888888777776666666544


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHh
Q 044951          168 IAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVS  211 (375)
Q Consensus       168 vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l  211 (375)
                      .=+.+++.-+-=++..+++.+.++.+.++.+|.++.+.+.|..+
T Consensus       267 slt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l  310 (327)
T KOG1581|consen  267 SLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL  310 (327)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence            44455566667788889999999999999999998877777544

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=89.46  E-value=1.1  Score=35.37  Aligned_cols=50  Identities=16%  Similarity=0.105  Sum_probs=39.8

Q ss_pred             HhhccCchhHhHH-HhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHh
Q 044951          319 FLQQTGPTTYSLV-GSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIF  368 (375)
Q Consensus       319 ~l~~~s~~t~si~-~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~l  368 (375)
                      .+++.+-+.+..+ +.+.-+++.+.|+++.+|..+...++|+.+++.|+.+
T Consensus        61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            4555554444444 5778899999999999999999999999999999865

Many members are annotated as potential transmembrane proteins.

>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function

Probab=89.15  E-value=0.6  Score=42.40  Aligned_cols=130  Identities=18%  Similarity=0.168  Sum_probs=75.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCCCCCchhHHHHHhhhHHHHHHHHHHHhhhhhHhHhcCcchhhHHHHHH
Q 044951          223 GYAWQIVNCILTASYSLTLRRVMDKAKQATRSGSLNEVSMVLLNNLLSLPFAMFLILIFDEWRYVMNTGVIELPMFWVAA  302 (375)
Q Consensus       223 G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  302 (375)
                      |++-+++|+++++.+-+=.||.-          .-|++-.+++++...........+..+.       +.     ++...
T Consensus         1 G~~a~~va~~~fGs~~vPvK~~~----------~gDg~~fQw~~~~~i~~~g~~v~~~~~~-------p~-----f~p~a   58 (254)
T PF07857_consen    1 GYIACIVAVLFFGSNFVPVKKFD----------TGDGFFFQWVMCSGIFLVGLVVNLILGF-------PP-----FYPWA   58 (254)
T ss_pred             CchhHHHHHHHhcccceeeEecc----------CCCcHHHHHHHHHHHHHHHHHHHHhcCC-------Cc-----ceeHH
Confidence            56778888888888777666542          2577777777765555555544433221       11     11233


Q ss_pred             HHHhHHHHHHHHHHHHHhhccCc-hhHhHHHhhhhHHHHHhHHh-hccC-----cCccchhhHHHHHHHhhHhhhhccc
Q 044951          303 TASGFLGLAISFTSMWFLQQTGP-TTYSLVGSLNKIPISLAGLV-LFNV-----PLSVPNMFSILFGLFAGIFFARAKM  374 (375)
Q Consensus       303 ~~~~~~~~~~~~~~~~~l~~~s~-~t~si~~~~~~v~~i~~~~~-~f~e-----~~t~~~~iG~~l~l~G~~ly~~~k~  374 (375)
                      .+.|.+....|....-+++..+= .-..+.+...-+..-..|-+ +||.     .-...+++|++++++|..+|...|.
T Consensus        59 mlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~  137 (254)
T PF07857_consen   59 MLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKS  137 (254)
T ss_pred             HhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecC
Confidence            45555555555555555555441 12333333344444443322 5553     2456799999999999999988764

The region concerned is approximately 280 residues long.

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=88.69  E-value=4.3  Score=37.79  Aligned_cols=134  Identities=17%  Similarity=0.251  Sum_probs=88.7

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHh-hCCcc-----ccccCHHHHHHHHHHH-HH
Q 044951           79 LISGTAYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGF-FGAVS-----VEKLNWKLIKLWIPVN-LI  151 (375)
Q Consensus        79 ~~~~~~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~-~~~~~-----~~~~~~~~~~~~~~~~-~~  151 (375)
                      .......+.+.....++.|...+.-++. -+.+.++..+.+.+.+.++.. .+..+     .+..........+.++ ++
T Consensus       159 Y~w~~~n~~~~a~~~v~~kk~vd~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~  237 (314)
T KOG1444|consen  159 YSWALANCLTTAAFVVYVKKSVDSANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVM  237 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHH
Confidence            4455566666666777888888766665 355667777777666655543 23211     1111111222333444 45


Q ss_pred             HHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhc
Q 044951          152 FIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGS  213 (375)
Q Consensus       152 ~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~  213 (375)
                      -.+..++..++.+..++.+++++....-..+.+...++.+++.++....|+.+.++|.++-.
T Consensus       238 gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~  299 (314)
T KOG1444|consen  238 GFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYS  299 (314)
T ss_pred             HHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHh
Confidence            56778899999999999999999977777777777777778888888888888877766543

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=86.52  E-value=0.66  Score=39.97  Aligned_cols=64  Identities=8%  Similarity=0.086  Sum_probs=56.6

Q ss_pred             HHHHHHHHHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          309 GLAISFTSMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       309 ~~~~~~~~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      ....+|....++++.||+.++-...-+..+.-+++|++++|.+....++..++.+.|++..+|.
T Consensus        63 Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~  126 (290)
T KOG4314|consen   63 WTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYA  126 (290)
T ss_pred             EecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEec
Confidence            3445777678899999999999999999999999999999999999999999999999887654

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=86.40  E-value=18  Score=30.08  Aligned_cols=126  Identities=8%  Similarity=-0.018  Sum_probs=70.3

Q ss_pred             HHHHHHHHHHHHHHHHhhccCCChhHHHHHHHHHHHHHHHHHHHhhCCccccccC--HHHHHHHHHHHHHHHHHHHHHhH
Q 044951           84 AYCISSCSMTLLNKVVLSTYNFNAGISLMFYQNLISTLVVAVFGFFGAVSVEKLN--WKLIKLWIPVNLIFIGMLVSGMY  161 (375)
Q Consensus        84 ~~~~~s~~~~~~nK~~l~~~~f~~p~~l~~~q~~~~~l~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  161 (375)
                      +=+.......-.|-.+-..  ...|+.-.+..+.++..++......+. +.++..  ++..+-.+..|++-......+..
T Consensus        12 ~aG~~l~~Q~~iN~qL~~~--~~spl~As~isf~vGt~~L~~l~l~~~-~~~~~a~~~~~pwW~~~GG~lGa~~vt~s~~   88 (150)
T COG3238          12 LAGALLPLQAAINGRLARY--LGSPLLASLISFLVGTVLLLILLLIKQ-GHPGLAAVASAPWWAWIGGLLGAIFVTSSIL   88 (150)
T ss_pred             HHhhhhhhHHHHHHHHHHH--cCChHHHHHHHHHHHHHHHHHHHHHhc-CCCchhhccCCchHHHHccchhhhhhhhhHH
Confidence            3333433344455555432  345777778888887666655444321 222211  22122223333444444555555


Q ss_pred             hhcccchhHHHH-HHHHHHHHHHHHHHHHh----cccccHHHHHHHHHHHHHhHhh
Q 044951          162 SLKYINIAMVTI-LKNMTNILTAVGELYMF----RKRQNQKVWTAMFLMIISAVSG  212 (375)
Q Consensus       162 al~~~~vs~~~i-l~~~~pvfv~l~~~~~~----~~~~~~~~~~~l~l~~~Gv~l~  212 (375)
                      ....+.++..++ ..+-+.+.-++++.+=.    ++++++.++++++++++|+.++
T Consensus        89 l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~  144 (150)
T COG3238          89 LAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA  144 (150)
T ss_pred             hccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence            566666555444 46667677777765543    3679999999999999995554

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=84.26  E-value=0.16  Score=45.22  Aligned_cols=73  Identities=16%  Similarity=0.229  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHHhcccccHHHHHH----HHHHHHHhHh
Q 044951          139 WKLIKLWIPVNLIFIGMLVSGMYSLKYINIAMVTILKNMTNILTAVGELYMFRKRQNQKVWTA----MFLMIISAVS  211 (375)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~vs~~~il~~~~pvfv~l~~~~~~~~~~~~~~~~~----l~l~~~Gv~l  211 (375)
                      .|+.+.-...|+..+..+.+...|-+...+++.-.+..+..+...+...+++|||-+++++..    +++++.|..+
T Consensus       206 ~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~  282 (288)
T COG4975         206 NKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAIL  282 (288)
T ss_pred             HHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhh
Confidence            344444555677777777777788888888877777888888888999999999999887644    4444444444

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=80.19  E-value=6.6  Score=35.00  Aligned_cols=67  Identities=16%  Similarity=0.137  Sum_probs=54.0

Q ss_pred             HHHHHHHHH-HHHHhhccCchhHhHHHhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951          307 FLGLAISFT-SMWFLQQTGPTTYSLVGSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK  373 (375)
Q Consensus       307 ~~~~~~~~~-~~~~l~~~s~~t~si~~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k  373 (375)
                      -.+++.++. +..+++...=-|..+.-.-||+..+++|+++.+..-++....-..++++|++++-|..
T Consensus        92 s~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~  159 (337)
T KOG1580|consen   92 SASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKE  159 (337)
T ss_pred             HHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccc
Confidence            344554444 3567777766666666788999999999999999999999999999999999987764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	375
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.39
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.26
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.13
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	97.88

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.39  E-value=4.6e-06  Score=64.82  Aligned_cols=71  Identities=11%  Similarity=0.148  Sum_probs=63.8

Q ss_pred             HHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhcccc
Q 044951          146 IPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSITD  216 (375)
Q Consensus       146 ~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~~  216 (375)
                      ....+++.+..++...+++++|++.+..+ ..+.|+++.+.+.+++||++++.+++++.++++|++++...+
T Consensus        34 ~~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            44445678888999999999999999888 899999999999999999999999999999999999886644

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.26  E-value=2.8e-06  Score=68.55  Aligned_cols=70  Identities=11%  Similarity=0.148  Sum_probs=52.2

Q ss_pred             HHHHHHHHHHHHHHhHhhcccchhHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhHhhccc
Q 044951          146 IPVNLIFIGMLVSGMYSLKYINIAMVTIL-KNMTNILTAVGELYMFRKRQNQKVWTAMFLMIISAVSGSIT  215 (375)
Q Consensus       146 ~~~~~~~~~~~~~~~~al~~~~vs~~~il-~~~~pvfv~l~~~~~~~~~~~~~~~~~l~l~~~Gv~l~~~~  215 (375)
                      +...+++.+..++.+.+++++|++.+..+ .++.|++++++++++++|++++.++++++++++|++++...
T Consensus        34 ~l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             CHHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            34446678889999999999999988877 89999999999999999999999999999999999988654

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.13  E-value=4.7e-06  Score=67.23  Aligned_cols=68  Identities=13%  Similarity=0.136  Sum_probs=46.3

Q ss_pred             HhHHHHHHHHHHH-HHhhccCchhHhHH-HhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhc
Q 044951          305 SGFLGLAISFTSM-WFLQQTGPTTYSLV-GSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARA  372 (375)
Q Consensus       305 ~~~~~~~~~~~~~-~~l~~~s~~t~si~-~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~  372 (375)
                      .+++++.+.+..+ +.+++.++.++..+ ..+.|+.++++|+++|||++++.+++|+++++.|+++.+..
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~  104 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLL  104 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence            3344444444443 78999999988777 89999999999999999999999999999999999988764

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=97.88  E-value=4.4e-05  Score=59.21  Aligned_cols=67  Identities=13%  Similarity=0.142  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHH-HHhhccCchhHhHH-HhhhhHHHHHhHHhhccCcCccchhhHHHHHHHhhHhhhhcc
Q 044951          307 FLGLAISFTSM-WFLQQTGPTTYSLV-GSLNKIPISLAGLVLFNVPLSVPNMFSILFGLFAGIFFARAK  373 (375)
Q Consensus       307 ~~~~~~~~~~~-~~l~~~s~~t~si~-~~~~~v~~i~~~~~~f~e~~t~~~~iG~~l~l~G~~ly~~~k  373 (375)
                      ++++...+..+ +.+++.+..++... ..+.|+.+++.|+++|||+++..+++|+++++.|++..+..+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33444444433 67888888888776 799999999999999999999999999999999999887643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00