Citrus Sinensis ID: 044987
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 368 | ||||||
| 225465845 | 362 | PREDICTED: uncharacterized protein LOC10 | 0.983 | 1.0 | 0.823 | 0.0 | |
| 224057278 | 362 | predicted protein [Populus trichocarpa] | 0.983 | 1.0 | 0.806 | 1e-177 | |
| 255543965 | 361 | conserved hypothetical protein [Ricinus | 0.980 | 1.0 | 0.842 | 1e-175 | |
| 225436644 | 367 | PREDICTED: uncharacterized protein LOC10 | 0.991 | 0.994 | 0.778 | 1e-168 | |
| 449515905 | 367 | PREDICTED: uncharacterized LOC101220530 | 0.994 | 0.997 | 0.795 | 1e-168 | |
| 296083855 | 359 | unnamed protein product [Vitis vinifera] | 0.975 | 1.0 | 0.774 | 1e-166 | |
| 357515143 | 360 | hypothetical protein MTR_8g039290 [Medic | 0.975 | 0.997 | 0.792 | 1e-165 | |
| 224072895 | 362 | predicted protein [Populus trichocarpa] | 0.983 | 1.0 | 0.787 | 1e-165 | |
| 356556807 | 364 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 0.989 | 0.781 | 1e-164 | |
| 147844794 | 416 | hypothetical protein VITISV_011144 [Viti | 0.983 | 0.870 | 0.694 | 1e-164 |
| >gi|225465845|ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244671 [Vitis vinifera] | Back alignment and taxonomy information |
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Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 298/362 (82%), Positives = 329/362 (90%)
Query: 7 MGRASPILMVLFTFGFAFGTYNLVTMVIRNRSVRNWVSDDSNGGVFFDPVVEMPENVKKL 66
M R SP+ +V+ + GF F TYNL+TM I NR+ V D+S+ + DP++EMPENV+K
Sbjct: 1 MARISPLFLVVLSLGFFFATYNLLTMTIHNRATGTLVVDESDHRLLSDPIIEMPENVRKP 60
Query: 67 KNSKTPYHVALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGFTRILHSGNPDELMDEI 126
KN+K P+H+ALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGFTRILHSG+PD LM+EI
Sbjct: 61 KNAKLPFHIALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGFTRILHSGSPDNLMEEI 120
Query: 127 PTMVVDPLPAGLDRGYIVLNRPWAFVQWLEKAKIDEEYILMAEPDHIFVRPLPNLSHGGM 186
PT VVDPLPAGLDRGYIVLNRPWAFVQWLEKA I+EEYILMAEPDHIF++PLPNL+HG
Sbjct: 121 PTFVVDPLPAGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFIKPLPNLAHGDY 180
Query: 187 PAGYPFFYIKPEQNEKIIRKFYPEENGPVTNVDPIGNSPVIIRKDLLEKIAPTWMNVSLK 246
PA YPFFYIKP QNEKIIRKFYPEE+GPVTNVDPIGNSPVII+++LLEKIAPTWMNVSL+
Sbjct: 181 PAAYPFFYIKPVQNEKIIRKFYPEEHGPVTNVDPIGNSPVIIKRELLEKIAPTWMNVSLR 240
Query: 247 MKDDPETDKTFGWVLEMYAYAVASALHGVQHILRNDFMLQPPWDLEVGERFIIHYTYGCD 306
MKDDPETDK FGWVLEMYAYAVASALHGVQHIL+ DFMLQPPWDLE ++FIIHYTYGCD
Sbjct: 241 MKDDPETDKVFGWVLEMYAYAVASALHGVQHILQKDFMLQPPWDLETAKKFIIHYTYGCD 300
Query: 307 YNLKGELTYGKIGEWRFDKRSYLRGPPPRNLSLPPPGVPESVATLVKMVNEATANIPNWE 366
YNLKGELTYGKIGEWRFDKRSYLRGPPPRNLSLPPPGVPESV TLVKMVNEATAN+P W+
Sbjct: 301 YNLKGELTYGKIGEWRFDKRSYLRGPPPRNLSLPPPGVPESVVTLVKMVNEATANLPRWD 360
Query: 367 TQ 368
TQ
Sbjct: 361 TQ 362
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224057278|ref|XP_002299202.1| predicted protein [Populus trichocarpa] gi|222846460|gb|EEE84007.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|255543965|ref|XP_002513045.1| conserved hypothetical protein [Ricinus communis] gi|223548056|gb|EEF49548.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225436644|ref|XP_002280257.1| PREDICTED: uncharacterized protein LOC100250010 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449515905|ref|XP_004164988.1| PREDICTED: uncharacterized LOC101220530 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|296083855|emb|CBI24243.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|357515143|ref|XP_003627860.1| hypothetical protein MTR_8g039290 [Medicago truncatula] gi|355521882|gb|AET02336.1| hypothetical protein MTR_8g039290 [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|224072895|ref|XP_002303932.1| predicted protein [Populus trichocarpa] gi|222841364|gb|EEE78911.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|356556807|ref|XP_003546712.1| PREDICTED: uncharacterized protein LOC100787652 [Glycine max] | Back alignment and taxonomy information |
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| >gi|147844794|emb|CAN83338.1| hypothetical protein VITISV_011144 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 368 | ||||||
| TAIR|locus:2185046 | 358 | AT5G13500 "AT5G13500" [Arabido | 0.970 | 0.997 | 0.714 | 1.7e-144 | |
| TAIR|locus:504955105 | 366 | AT5G25265 "AT5G25265" [Arabido | 0.945 | 0.950 | 0.603 | 1.7e-121 | |
| TAIR|locus:2059573 | 358 | AT2G25260 "AT2G25260" [Arabido | 0.817 | 0.840 | 0.661 | 2.3e-117 | |
| TAIR|locus:2082314 | 802 | AT3G01720 "AT3G01720" [Arabido | 0.698 | 0.320 | 0.234 | 1.4e-10 |
| TAIR|locus:2185046 AT5G13500 "AT5G13500" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1412 (502.1 bits), Expect = 1.7e-144, P = 1.7e-144
Identities = 258/361 (71%), Positives = 295/361 (81%)
Query: 7 MGRASPILMVLFTFGFAFGTYNLVTMVIRNRSVRNWVSDDSNGGVFFDPVVEMPENVKKL 66
MG+AS +L+ L FGF TYNL+T+++ NRS VS+ S+G DPVV+MP N++K
Sbjct: 1 MGKASGLLLFLLGFGFFVVTYNLLTLIVHNRS---GVSN-SDGSPLLDPVVQMPLNIRKA 56
Query: 67 KNSKTPYHVALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGFTRILHSGNPDELMDEI 126
K+S P+HVALTATDAPY+KWQCRIMYYWYK+KK LPGS+MGGFTRILHSGN D LMDEI
Sbjct: 57 KSSPAPFHVALTATDAPYNKWQCRIMYYWYKQKKALPGSDMGGFTRILHSGNSDNLMDEI 116
Query: 127 PTMVVDPLPAGLDRGYIVLNRPWAFVQWLEKAKIDEEYILMAEPDHIFVRPLPNLSHGGM 186
PT VVDPLP GLDRGY+VLNRPWAFVQWLE+A I E+Y+LMAEPDH+FV PLPNL+ GG
Sbjct: 117 PTFVVDPLPPGLDRGYVVLNRPWAFVQWLERATIKEDYVLMAEPDHVFVNPLPNLAVGGF 176
Query: 187 PAGYPFFYIKPEQNEKIIRKFYPEENGPVTNVDPIGNSPVIIRKDLLEKIAPTWMNVSLK 246
PA +PFFYI PE+ E I+RK+YP E GPVTN+DPIGNSPVII K+ LEKIAPTWMNVSL
Sbjct: 177 PAAFPFFYITPEKYENIVRKYYPAEMGPVTNIDPIGNSPVIISKESLEKIAPTWMNVSLT 236
Query: 247 MKDDPETDKTFGWVLEMYAYAVASALHGVQHILRNDFMLQPPWDLEVGERFIIHYTYGCD 306
MK+DPETDK FGWVLEMY YA+ASA+HGV+HILR DFMLQPPWDL +FIIHYTYGCD
Sbjct: 237 MKNDPETDKAFGWVLEMYGYAIASAIHGVRHILRKDFMLQPPWDLSTKGKFIIHYTYGCD 296
Query: 307 YNLKGELTYGKIGEWRFDKRSYXXXXXXXXXXXXXXXXXESVATLVKMVNEATANIPNWE 366
YN+KGELTYGKIGEWRFDKRS+ ESV TLVKMVNEATA IPNW+
Sbjct: 297 YNMKGELTYGKIGEWRFDKRSHLRGPPPRNMSLPPPGVPESVVTLVKMVNEATATIPNWD 356
Query: 367 T 367
T
Sbjct: 357 T 357
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| TAIR|locus:504955105 AT5G25265 "AT5G25265" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2059573 AT2G25260 "AT2G25260" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2082314 AT3G01720 "AT3G01720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| grail3.0100007401 | hypothetical protein (363 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00