Citrus Sinensis ID: 045010

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
MSDQSRPMTQALYEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQYVQQKAQEATQAS
Secondary Structure (PSIPRED)
ccccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHEEEHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MSDQSRPMTQALyekapstplAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPvlvlfspiLVPAAIAVFLATVGFLvsggcgvtAITVLSWIYSYvkgkhppgadhldYARTKIADKARDMTERAKEYGQYVQQKAQEATQAS
Flexible Loop (DISEMBL)
MSDQSRPMTQALYEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGkhppgadhldYARTKIADKARDMTERAKEYGQYVQQKAQEATQAS
Low Complexity Region (SEG)
MSDQSRPMTQALYEKAPSTPLAVKFLTAAtiggtllflsgltltgtVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQYVQQKAQEATQAS
Disordered region (IsUnstruct)
*******************PLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHP***DHLDYA*********************************
Disordered Region (DISOPRED)
***********************KFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYV***********************************************
Disordered Region (DISEMBL)
**********ALYEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTE********************
Disordered Region (DISPRO)
*****************STPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQYVQQKAQ******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSDQSRPMTQALYEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQYVQQKAQEATQAS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	146	2.2.26 [Sep-21-2011]
Q42980	148	Oleosin 16 kDa OS=Oryza s	yes	no	0.890	0.878	0.535	6e-32
Q96543	167	Oleosin 16 kDa OS=Bromus	N/A	no	0.794	0.694	0.586	1e-30
Q43804	148	Oleosin 1 OS=Prunus dulci	N/A	no	0.609	0.601	0.685	5e-30
P29111	175	Major oleosin NAP-II (Fra	N/A	no	0.794	0.662	0.610	6e-28
P29110	195	Oleosin Bn-III OS=Brassic	N/A	no	0.753	0.564	0.618	7e-28
P29525	173	Oleosin 18.5 kDa OS=Arabi	no	no	0.753	0.635	0.627	1e-27
P13436	156	Oleosin Zm-I OS=Zea mays	N/A	no	0.684	0.641	0.6	1e-27
P29109	183	Oleosin Bn-V (Fragment) O	N/A	no	0.794	0.633	0.601	6e-27
Q43284	141	Oleosin 14.9 kDa OS=Arabi	no	no	0.863	0.893	0.460	4e-26
Q9SS98	183	Oleosin 5 OS=Arabidopsis	no	no	0.917	0.732	0.388	1e-23

>sp|Q42980|OLEO1_ORYSJ Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=OLE16 PE=2 SV=2

 Score =  135 bits (341), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 75/140 (53%), Positives = 96/140 (68%), Gaps = 10/140 (7%)

Query: 1   MSDQSRPMT----------QALYEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIAL 50
           M+DQ R +           Q   EK      A+K +TAAT GG++L LSGL L GTVIAL
Sbjct: 1   MADQHRGVIGGGGYGDRGGQEQQEKQRFMMTALKTVTAATAGGSMLVLSGLILAGTVIAL 60

Query: 51  IMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHL 110
            +ATPVLV+FSP+LVPAAIA+ L   GF+ SGG GV A++V SW+Y Y+ GKHPPGAD L
Sbjct: 61  TVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGADQL 120

Query: 111 DYARTKIADKARDMTERAKE 130
           D+A+ ++A KARD+ E A+ 
Sbjct: 121 DHAKARLASKARDIKEAAQH 140

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.
Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q96543|OLE16_BROSE Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 68/116 (58%), Positives = 90/116 (77%)

Query: 14  EKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFL 73
           +K P    A+K  TAAT GG++L LSGL L GTVIAL +ATPVLV+FSP+LVPAAI++ L
Sbjct: 43  QKQPVMMCALKAATAATAGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAISMAL 102

Query: 74  ATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAK 129
            + GF+ SGG GV A++V SW+Y Y+ GKHPPGAD LD+A+ ++A KARD+ + A+
Sbjct: 103 MSAGFVTSGGLGVAAVSVFSWMYKYLAGKHPPGADQLDHAKARLASKARDIKDAAQ 158

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Bromus secalinus (taxid: 4502)

>sp|Q43804|OLEO1_PRUDU Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1

 Score =  129 bits (325), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 61/89 (68%), Positives = 73/89 (82%)

Query: 45  GTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHP 104
           GTVIAL +ATP+LV+FSP+LVPA I V L T+GFL SGG GV A+TVLSWIY YV GK P
Sbjct: 49  GTVIALTIATPLLVIFSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQP 108

Query: 105 PGADHLDYARTKIADKARDMTERAKEYGQ 133
           PGAD LD AR K+A KARD+ +RA+++GQ
Sbjct: 109 PGADQLDQARHKLAGKARDIKDRAEQFGQ 137

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Prunus dulcis (taxid: 3755)

>sp|P29111|OLEO2_BRANA Major oleosin NAP-II (Fragment) OS=Brassica napus PE=1 SV=1

 Score =  122 bits (307), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/118 (61%), Positives = 84/118 (71%), Gaps = 2/118 (1%)

Query: 24  KFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGG 83
           K +TA T GG+LL LS LTL GTVIAL +ATP+LV+FSPILVPA I V L   GFL SGG
Sbjct: 47  KAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGG 106

Query: 84  CGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQYVQQKAQE 141
            G+ AITV SWIY Y  G+HP G+D LD AR K+  K +DM +RA+ YGQ  QQ   E
Sbjct: 107 FGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGGKVQDMKDRAQYYGQ--QQTGGE 162

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Brassica napus (taxid: 3708)

>sp|P29110|OLEO3_BRANA Oleosin Bn-III OS=Brassica napus PE=2 SV=1

 Score =  122 bits (306), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 68/110 (61%), Positives = 82/110 (74%)

Query: 24  KFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGG 83
           K +TA T GG+LL LS LTL GTVIAL +ATP+LV+FSPILVPA I V +   GFL SGG
Sbjct: 59  KAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVAMLITGFLSSGG 118

Query: 84  CGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQ 133
            G+ AITV SWIY Y  G+HP G+D LD AR K+  KA+D+ +RA+ YGQ
Sbjct: 119 FGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYYGQ 168

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Brassica napus (taxid: 3708)

>sp|P29525|OLEO1_ARATH Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25140 PE=1 SV=1

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 81/110 (73%)

Query: 24  KFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGG 83
           K  TA T GG+LL LS LTL GTVIAL +ATP+LV+FSPILVPA I V L   GFL SGG
Sbjct: 45  KAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGG 104

Query: 84  CGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQ 133
            G+ AITV SWIY Y  G+HP G+D LD AR K+  KA+D+ +RA+ YGQ
Sbjct: 105 FGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYYGQ 154

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Arabidopsis thaliana (taxid: 3702)

>sp|P13436|OLEO1_MAIZE Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/100 (60%), Positives = 78/100 (78%)

Query: 31  IGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAIT 90
            GG++L LSGL L GTVIAL +ATPVLV+FSP+LVPAAIA+ L   GF+ SGG GV A++
Sbjct: 49  FGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALS 108

Query: 91  VLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKE 130
           V SW+Y Y+ GKHPP AD LD+A+ ++A KARD+ + A+ 
Sbjct: 109 VFSWMYKYLTGKHPPAADQLDHAKARLASKARDVKDAAQH 148

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Zea mays (taxid: 4577)

>sp|P29109|OLEO5_BRANA Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=1

 Score =  119 bits (298), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/118 (60%), Positives = 82/118 (69%), Gaps = 2/118 (1%)

Query: 24  KFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGG 83
           K  TA T G +LL LS LTL GTVIALI+ATP+LV+FSPILVPA I V L   GFL SG 
Sbjct: 47  KATTAVTAGDSLLVLSSLTLVGTVIALIVATPLLVIFSPILVPALITVALLITGFLSSGA 106

Query: 84  CGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQYVQQKAQE 141
            G+ AITV SWIY Y  G+HP G+D LD AR K+  KA+DM +RA  YGQ  Q   +E
Sbjct: 107 FGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDMKDRAYYYGQ--QHTGEE 162

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Brassica napus (taxid: 3708)

>sp|Q43284|OLEO3_ARATH Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE=2 SV=2

 Score =  116 bits (291), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 64/139 (46%), Positives = 86/139 (61%), Gaps = 13/139 (9%)

Query: 1   MSDQSRPMTQAL-----YEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATP 55
           M+DQ+R   + +      E  P     VK  TA T GG+LL LSGLTL GTVIAL +ATP
Sbjct: 1   MADQTRTHHEMISRDSTQEAHPKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATP 60

Query: 56  VLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYART 115
           +LV+FSP+LVPA + V L   GFL SGG G+ AIT  SW+Y ++ G    G+D ++ AR 
Sbjct: 61  LLVIFSPVLVPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTGS---GSDKIENARM 117

Query: 116 KIADKARDMTERAKEYGQY 134
           K+  + +D      +YGQ+
Sbjct: 118 KVGSRVQD-----TKYGQH 131

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SS98|OLEO5_ARATH Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=1 SV=1

 Score =  108 bits (269), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 54/139 (38%), Positives = 90/139 (64%), Gaps = 5/139 (3%)

Query: 10  QALY-EKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAA 68
           + LY +  PS+   +       IGGTLL ++GLTL G+VI L++A P+ ++FSP++VPAA
Sbjct: 24  KVLYPQSGPSSTQVLAVFVGVPIGGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAA 83

Query: 69  IAVFLATVGFLVSGGCGVTAITVLSWIYSYVK--GKHPPGADHLDYARTKIADKARDMTE 126
             + LA  GFL SG  G+T ++ +SW+ +Y++  G+H P  + L+ A+ ++AD A  + +
Sbjct: 84  FVIGLAMTGFLASGAIGLTGLSSMSWVLNYIRRAGQHIP--EELEEAKHRLADMAEYVGQ 141

Query: 127 RAKEYGQYVQQKAQEATQA 145
           R K+ GQ ++ KA +  +A
Sbjct: 142 RTKDAGQTIEDKAHDVREA 160

May have a structural role to stabilize the lipid body during desiccation of the seed by preventing coalescence of the oil. Probably interacts with both lipid and phospholipid moieties of lipid bodies. May also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
21311555	147	15.8 kDa oleosin [Theobroma cacao]	0.993	0.986	0.731	4e-58
225429404	146	PREDICTED: oleosin 16 kDa [Vitis vinifer	1.0	1.0	0.746	3e-56
255550890	232	Oleosin, putative [Ricinus communis] gi|	0.986	0.620	0.680	2e-48
403596368	143	oleosin1 [Plukenetia volubilis]	0.931	0.951	0.700	6e-47
224092248	149	predicted protein [Populus trichocarpa]	0.972	0.953	0.639	1e-44
224101769	134	predicted protein [Populus trichocarpa]	0.869	0.947	0.652	3e-41
357466567	161	Oleosin [Medicago truncatula] gi|3554926	0.828	0.751	0.685	2e-40
52001241	166	oleosin 3 [Arachis hypogaea]	0.821	0.722	0.663	1e-37
95925793	140	OleIII [Camellia oleifera]	0.760	0.792	0.684	2e-36
399105973	137	14.3 kDa oleosin [Jatropha curcas]	0.890	0.948	0.603	3e-36

>gi|21311555|gb|AAM46778.1|AF466103_1 15.8 kDa oleosin [Theobroma cacao]

 Score =  228 bits (582), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 106/145 (73%), Positives = 121/145 (83%)

Query: 2   SDQSRPMTQALYEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFS 61
           +DQ++PMTQ LYE APS+  A KFLTA T+G TLLFLSGLTLTGTV+ALIMATP++V+FS
Sbjct: 3   NDQNKPMTQKLYESAPSSRQAAKFLTATTLGATLLFLSGLTLTGTVMALIMATPLMVIFS 62

Query: 62  PILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKA 121
           PILVPA + +FL   GFL SGGCGV AIT LSWIY+YV+GKHPPGAD LDYAR  +A  A
Sbjct: 63  PILVPAGVVIFLVITGFLFSGGCGVAAITALSWIYNYVRGKHPPGADQLDYARNTLARTA 122

Query: 122 RDMTERAKEYGQYVQQKAQEATQAS 146
           RDMTE+AKEYGQYVQ KAQE  Q S
Sbjct: 123 RDMTEKAKEYGQYVQHKAQEVAQGS 147

Source: Theobroma cacao

Species: Theobroma cacao

Genus: Theobroma

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225429404|ref|XP_002275496.1| PREDICTED: oleosin 16 kDa [Vitis vinifera] gi|147799031|emb|CAN74835.1| hypothetical protein VITISV_023324 [Vitis vinifera]

 Score =  223 bits (567), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 109/146 (74%), Positives = 120/146 (82%)

Query: 1   MSDQSRPMTQALYEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLF 60
           MSDQ +P+T  LY+ APS+  AVKFLTAATIG  LL LSGLTLTGTVIALI+ATP LV+F
Sbjct: 1   MSDQPKPVTPKLYDSAPSSRQAVKFLTAATIGTILLVLSGLTLTGTVIALIIATPALVVF 60

Query: 61  SPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADK 120
           SPILVPA   +FLAT GFL SG CGVTA+  LSW+Y YV GKHPPGAD LDYAR +IA+K
Sbjct: 61  SPILVPAGTVIFLATTGFLFSGCCGVTALMALSWLYEYVAGKHPPGADQLDYARMRIANK 120

Query: 121 ARDMTERAKEYGQYVQQKAQEATQAS 146
           ARDM ERAKEYGQYV  KAQEATQ S
Sbjct: 121 ARDMKERAKEYGQYVHHKAQEATQGS 146

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550890|ref|XP_002516493.1| Oleosin, putative [Ricinus communis] gi|223544313|gb|EEF45834.1| Oleosin, putative [Ricinus communis]

 Score =  196 bits (499), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 98/144 (68%), Positives = 109/144 (75%)

Query: 1   MSDQSRPMTQALYEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLF 60
           MSDQ R + Q     A  + L VKFLTAAT+G   LFLSGL LTGTVI L+MATP+LVL 
Sbjct: 85  MSDQPRSLHQMTPGTAAPSHLVVKFLTAATVGVACLFLSGLILTGTVITLVMATPLLVLS 144

Query: 61  SPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADK 120
            PI+VPAAI VFL   GF  SGGCG+ AI  L+W+Y Y+ GKHPPGAD LDYAR +IA K
Sbjct: 145 GPIMVPAAIVVFLVCSGFFFSGGCGLAAIMSLTWMYKYLTGKHPPGADKLDYARGQIARK 204

Query: 121 ARDMTERAKEYGQYVQQKAQEATQ 144
           A DM ERAKEYGQYVQQKAQEATQ
Sbjct: 205 AHDMKERAKEYGQYVQQKAQEATQ 228

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|403596368|gb|AFR46652.1| oleosin1 [Plukenetia volubilis]

 Score =  191 bits (486), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 96/137 (70%), Positives = 108/137 (78%), Gaps = 1/137 (0%)

Query: 8   MTQALYEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPA 67
           MT+     APS P AVKFLTAAT+G   L LS LTLTGTVIAL++ATP LV+ SP+LVPA
Sbjct: 4   MTRDRDTAAPSHP-AVKFLTAATVGAACLLLSVLTLTGTVIALVVATPALVVCSPVLVPA 62

Query: 68  AIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTER 127
            I VFL T GF  SG CG+ AI VL+W+Y+Y+ GKHPPGAD LDYAR +IA KA DM ER
Sbjct: 63  TIVVFLVTCGFFFSGSCGLAAIMVLTWMYNYLTGKHPPGADRLDYARGQIARKAHDMKER 122

Query: 128 AKEYGQYVQQKAQEATQ 144
           AKEYGQYVQQKAQEATQ
Sbjct: 123 AKEYGQYVQQKAQEATQ 139

Source: Plukenetia volubilis

Species: Plukenetia volubilis

Genus: Plukenetia

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224092248|ref|XP_002309527.1| predicted protein [Populus trichocarpa] gi|222855503|gb|EEE93050.1| predicted protein [Populus trichocarpa]

 Score =  184 bits (466), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 94/147 (63%), Positives = 112/147 (76%), Gaps = 5/147 (3%)

Query: 1   MSDQSRPMTQALYEKA---PSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVL 57
           M D+SRPM++  YE +   P++  AVKF+TA TIG  LL LSGLTLTGTVIAL++ATPVL
Sbjct: 1   MPDRSRPMSR--YEPSSGQPTSRKAVKFMTAGTIGAALLVLSGLTLTGTVIALVVATPVL 58

Query: 58  VLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKI 117
           VL SPILVPAAI VFL   GF  S GCG+ AI V  WIY+YV GKHPPGAD LDYA  +I
Sbjct: 59  VLSSPILVPAAIVVFLVASGFFFSSGCGLAAIMVSLWIYNYVTGKHPPGADKLDYAGGRI 118

Query: 118 ADKARDMTERAKEYGQYVQQKAQEATQ 144
           A+ A+DM +RAKE GQ V+QK QE++ 
Sbjct: 119 AETAKDMKDRAKECGQNVRQKVQESSH 145

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224101769|ref|XP_002334246.1| predicted protein [Populus trichocarpa] gi|222870195|gb|EEF07326.1| predicted protein [Populus trichocarpa]

 Score =  173 bits (438), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 90/138 (65%), Positives = 104/138 (75%), Gaps = 11/138 (7%)

Query: 13  YEKAPSTPLA----VKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAA 68
           YE++ + P +    +KF+TA TIG  LL LSGLTLTGTVIALI+ATP+LVL SP+LVPAA
Sbjct: 4   YEQSSAQPTSRKAVLKFMTAGTIGAALLVLSGLTLTGTVIALIVATPILVLCSPVLVPAA 63

Query: 69  IAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERA 128
           + VFL + GF  SGGCG+ AI VL W Y+YV GKHPPGAD LDYA  KIA       E+A
Sbjct: 64  MVVFLVSSGFFFSGGCGLAAIMVLLWTYNYVTGKHPPGADRLDYATRKIA-------EKA 116

Query: 129 KEYGQYVQQKAQEATQAS 146
           KEYGQYVQ KAQEATQ S
Sbjct: 117 KEYGQYVQPKAQEATQTS 134

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466567|ref|XP_003603568.1| Oleosin [Medicago truncatula] gi|355492616|gb|AES73819.1| Oleosin [Medicago truncatula]

 Score =  169 bits (429), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 83/121 (68%), Positives = 95/121 (78%)

Query: 23  VKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSG 82
           VKF+TAATIG TLLFLSGL L GTVI LI+ATP+LV+FSPILVPAAI + L   GF+ SG
Sbjct: 37  VKFITAATIGVTLLFLSGLILVGTVIGLIIATPLLVIFSPILVPAAIVLSLIAGGFMFSG 96

Query: 83  GCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQYVQQKAQEA 142
           GCGV AI  LSWIY+YV G  P G D LDYA+  I DKARD+ ERAK+YG Y Q +AQ+A
Sbjct: 97  GCGVAAIAALSWIYNYVSGNRPAGTDTLDYAKGLITDKARDVKERAKDYGNYAQGRAQDA 156

Query: 143 T 143
           T
Sbjct: 157 T 157

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|52001241|gb|AAU21501.1| oleosin 3 [Arachis hypogaea]

 Score =  160 bits (406), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 81/122 (66%), Positives = 96/122 (78%), Gaps = 2/122 (1%)

Query: 22  AVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVS 81
           A+KF+TA+TIG + L LSGL LTGTVI LI+ATP+LV+FSPILVPAAI + LA  GFL S
Sbjct: 44  AIKFMTASTIGVSFLILSGLILTGTVIGLIIATPLLVIFSPILVPAAITLALAAGGFLFS 103

Query: 82  GGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQYVQQKAQE 141
           GGCGV AI  LSW+YSYV GKHP G+D LDYA+  IADKARD+ +RAK+Y      +AQE
Sbjct: 104 GGCGVAAIAALSWLYSYVTGKHPAGSDRLDYAKGVIADKARDVKDRAKDYAG--AGRAQE 161

Query: 142 AT 143
            T
Sbjct: 162 GT 163

Source: Arachis hypogaea

Species: Arachis hypogaea

Genus: Arachis

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|95925793|gb|ABF57563.1| OleIII [Camellia oleifera]

 Score =  157 bits (396), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 76/111 (68%), Positives = 90/111 (81%)

Query: 23  VKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSG 82
           VK  TA T GG+LL LSGLTL GTVIAL +ATP+LV+FSP+LVPAA+ V L  +GFL SG
Sbjct: 21  VKAATAITAGGSLLVLSGLTLAGTVIALALATPLLVIFSPVLVPAAVTVCLLNMGFLASG 80

Query: 83  GCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQ 133
           G GV  I+VLSWIY YV GKHPPGAD LD ARTK+A KAR+M +RA+++GQ
Sbjct: 81  GFGVAGISVLSWIYRYVTGKHPPGADQLDQARTKLASKAREMKDRAEQFGQ 131

Source: Camellia oleifera

Species: Camellia oleifera

Genus: Camellia

Family: Theaceae

Order: Ericales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|399105973|gb|AFP19885.1| 14.3 kDa oleosin [Jatropha curcas]

 Score =  156 bits (394), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/131 (60%), Positives = 98/131 (74%), Gaps = 1/131 (0%)

Query: 5   SRPMTQALYEKAPSTPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPIL 64
             P +Q + ++ P +   VK  TA T GG+LL LSGLTL GTVIAL +ATP+LV+FSP+L
Sbjct: 3   EHPQSQHVGQQ-PRSHQVVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVL 61

Query: 65  VPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDM 124
           VPA I V L   GFL SGG GV AI+VLSWIY YV GKHPPGA+ LD AR K+A KAR+M
Sbjct: 62  VPAVITVCLIITGFLASGGFGVAAISVLSWIYRYVTGKHPPGAESLDQARLKLAGKAREM 121

Query: 125 TERAKEYGQYV 135
            +RA+++GQ+V
Sbjct: 122 KDRAEQFGQHV 132

Source: Jatropha curcas

Species: Jatropha curcas

Genus: Jatropha

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
TAIR|locus:2043470	149	AT2G25890 "AT2G25890" [Arabido	0.931	0.912	0.482	1.1e-30
TAIR|locus:2117328	173	OLEO1 "AT4G25140" [Arabidopsis	0.753	0.635	0.518	2.6e-24
TAIR|locus:2170558	199	OLEO2 "AT5G40420" [Arabidopsis	0.897	0.658	0.343	8.3e-19
TAIR|locus:2089189	191	OLEO4 "AT3G27660" [Arabidopsis	0.890	0.680	0.338	4.6e-18
TAIR|locus:2176212	141	OLEO3 "AT5G51210" [Arabidopsis	0.815	0.843	0.392	1.2e-17
TAIR|locus:2084223	183	AT3G01570 "AT3G01570" [Arabido	0.917	0.732	0.309	5.3e-17
TAIR|locus:2086879	166	AT3G18570 "AT3G18570" [Arabido	0.630	0.554	0.375	1.1e-14
TAIR|locus:2183414	106	GRP19 "glycine-rich protein 19	0.404	0.556	0.508	2.2e-11
TAIR|locus:2028471	169	AT1G48990 "AT1G48990" [Arabido	0.554	0.479	0.376	9.4e-11
TAIR|locus:2183424	153	GRP20 "glycine-rich protein 20	0.397	0.379	0.379	4.2e-08

TAIR|locus:2043470 AT2G25890 "AT2G25890" [Arabidopsis thaliana (taxid:3702)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 69/143 (48%), Positives = 90/143 (62%)

Query:     4 QSRPMTQALYEKAPSTPLAVKFLTAAXXXXXXXXXXXXXXXXXVIALIMATPVLVLFSPI 63
             Q +P+ ++L+E +PST   V+F+TAA                 VI LI+ATP++VLFSP+
Sbjct:    10 QQQPIMRSLHESSPSTRQIVRFVTAATIGLSLLVLSGLTLTGTVIGLIVATPLMVLFSPV 69

Query:    64 LVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARD 123
             LVPA I + L T+GFL SGGCGV A T L+WIY YV GKHP GAD +DYAR +IA+KA  
Sbjct:    70 LVPAVITIGLLTMGFLFSGGCGVAAATALTWIYKYVTGKHPMGADKVDYARMRIAEKA-- 127

Query:   124 MTERAKEYGQYVQQKAQEATQAS 146
                  KE G Y   + Q+  Q +
Sbjct:   128 -----KELGHYTHSQPQQTHQTT 145

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2117328 OLEO1 "AT4G25140" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 57/110 (51%), Positives = 68/110 (61%)

Query:    24 KFLTAAXXXXXXXXXXXXXXXXXVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGG 83
             K  TA                  VIAL +ATP+LV+FSPILVPA I V L   GFL SGG
Sbjct:    45 KAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGG 104

Query:    84 CGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQ 133
              G+ AITV SWIY Y  G+HP G+D LD AR K+  KA+D+ +RA+ YGQ
Sbjct:   105 FGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYYGQ 154

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0016020 "membrane" evidence=ISS

GO:0019915 "lipid storage" evidence=ISS;RCA;IMP

GO:0010344 "seed oilbody biogenesis" evidence=IGI;IMP

GO:0009845 "seed germination" evidence=IGI;RCA

GO:0050826 "response to freezing" evidence=RCA;IMP

GO:0006406 "mRNA export from nucleus" evidence=RCA

GO:0006606 "protein import into nucleus" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

TAIR|locus:2170558 OLEO2 "AT5G40420" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 45/131 (34%), Positives = 72/131 (54%)

Query:    14 EKAPSTPLAVKFLTAAXXXXXXXXXXXXXXXXXVIALIMATPVLVLFSPILVPAAIAVFL 73
             E  PS+   +  L                    VI L++A P+ +LFSP++VPAA+ + L
Sbjct:    46 ESGPSSTQVLSLLIGVPVVGSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTIGL 105

Query:    74 ATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQ 133
             A  GFL SG  G+T ++ +SW+ +Y++G      + L+YA+ ++AD      ++ KE GQ
Sbjct:   106 AMTGFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQLEYAKRRMADAVGYAGQKGKEMGQ 165

Query:   134 YVQQKAQEATQ 144
             +VQ KAQ+  Q
Sbjct:   166 HVQNKAQDVKQ 176

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA;IDA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS;RCA;IMP

GO:0010344 "seed oilbody biogenesis" evidence=IGI;IMP

GO:0009845 "seed germination" evidence=IGI;RCA

GO:0050826 "response to freezing" evidence=RCA;IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

TAIR|locus:2089189 OLEO4 "AT3G27660" [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
 Identities = 44/130 (33%), Positives = 70/130 (53%)

Query:    15 KAPSTPLAVKFLTAAXXXXXXXXXXXXXXXXXVIALIMATPVLVLFSPILVPAAIAVFLA 74
             + PST   +  +                    VI L+++ P+ +LFSP++VPAA+ + LA
Sbjct:    45 RGPSTNQILALIAGVPIGGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAALTIGLA 104

Query:    75 TVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQY 134
               G L SG  G+T ++ +SW+ +Y++G      + LDYA+ ++AD       + KE GQY
Sbjct:   105 VTGILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMADAVGYAGMKGKEMGQY 164

Query:   135 VQQKAQEATQ 144
             VQ KA EA +
Sbjct:   165 VQDKAHEARE 174

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS;RCA

GO:0009845 "seed germination" evidence=IGI;RCA

GO:0010344 "seed oilbody biogenesis" evidence=IGI

GO:0050826 "response to freezing" evidence=RCA;IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

TAIR|locus:2176212 OLEO3 "AT5G51210" [Arabidopsis thaliana (taxid:3702)]

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 51/130 (39%), Positives = 69/130 (53%)

Query:     5 SRPMTQALYEKAPSTPLAVKFLTAAXXXXXXXXXXXXXXXXXVIALIMATPVLVLFSPIL 64
             SR  TQ  + KA      VK  TA                  VIAL +ATP+LV+FSP+L
Sbjct:    13 SRDSTQEAHPKARQM---VKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVL 69

Query:    65 VPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDM 124
             VPA + V L   GFL SGG G+ AIT  SW+Y ++ G    G+D ++ AR K+  + +D 
Sbjct:    70 VPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTGS---GSDKIENARMKVGSRVQDT 126

Query:   125 TERAKEYGQY 134
                  +YGQ+
Sbjct:   127 -----KYGQH 131

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

TAIR|locus:2084223 AT3G01570 "AT3G01570" [Arabidopsis thaliana (taxid:3702)]

 Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
 Identities = 43/139 (30%), Positives = 76/139 (54%)

Query:    10 QALY-EKAPSTPLAVKFLTAAXXXXXXXXXXXXXXXXXVIALIMATPVLVLFSPILVPAA 68
             + LY +  PS+   +                       VI L++A P+ ++FSP++VPAA
Sbjct:    24 KVLYPQSGPSSTQVLAVFVGVPIGGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAA 83

Query:    69 IAVFLATVGFLVSGGCGVTAITVLSWIYSYVK--GKHPPGADHLDYARTKIADKARDMTE 126
               + LA  GFL SG  G+T ++ +SW+ +Y++  G+H P  + L+ A+ ++AD A  + +
Sbjct:    84 FVIGLAMTGFLASGAIGLTGLSSMSWVLNYIRRAGQHIP--EELEEAKHRLADMAEYVGQ 141

Query:   127 RAKEYGQYVQQKAQEATQA 145
             R K+ GQ ++ KA +  +A
Sbjct:   142 RTKDAGQTIEDKAHDVREA 160

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS;RCA

GO:0009845 "seed germination" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2086879 AT3G18570 "AT3G18570" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 1.1e-14, P = 1.1e-14
 Identities = 36/96 (37%), Positives = 59/96 (61%)

Query:    47 VIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPG 106
             V+  I+  P++++ SPI +P    VF+   GFL   G  V  + ++SW Y Y +G HP G
Sbjct:    71 VLGFIVFLPLIIISSPIWIP----VFVVVGGFLTVSGFLVGTVALVSWTYRYFRGMHPVG 126

Query:   107 ADHLDYARTKIADKARDMTERAKEYGQYVQQKAQEA 142
             ++ +DYAR++I D A  + + A+EYG Y   +A++A
Sbjct:   127 SNQMDYARSRIYDTASHVKDYAREYGGYFHGRAKDA 162

GO:0003674 "molecular_function" evidence=ND

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

TAIR|locus:2183414 GRP19 "glycine-rich protein 19" [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 30/59 (50%), Positives = 39/59 (66%)

Query:    47 VIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPP 105
             V+A I++TP+ V+FSP+LVPA IA  L   GF  SG  G TA T+LSW+Y    G+  P
Sbjct:    29 VVACIISTPLFVIFSPVLVPATIATTLLASGFTASGSFGATAFTILSWLYKKRTGRDLP 87

GO:0009507 "chloroplast" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

GO:0005576 "extracellular region" evidence=IDA

GO:0008289 "lipid binding" evidence=ISS

GO:0019953 "sexual reproduction" evidence=RCA;IMP

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2028471 AT1G48990 "AT1G48990" [Arabidopsis thaliana (taxid:3702)]

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 32/85 (37%), Positives = 48/85 (56%)

Query:    47 VIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPG 106
             V+  I   P++++ SPI +P    +FL   GFL   G  +    V+SW+Y Y KG HP  
Sbjct:    77 VLGFIAFLPLIIISSPIWIP----LFLIVTGFLSLAGLILATGAVVSWLYRYFKGMHPLR 132

Query:   107 ADHLDYARTKIADKARDMTERAKEY 131
             +D +DYAR++I D A  + + A  Y
Sbjct:   133 SDQVDYARSRIHDTAAHVKDYAGGY 157

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

TAIR|locus:2183424 GRP20 "glycine-rich protein 20" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query:    48 IALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPP 105
             +AL  + P+ ++FSP+LVPA IA  +   G +  G  GV+ +T+L W+Y    G+  P
Sbjct:    57 VALFASMPLFLVFSPVLVPAGIATTILASGLMAGGTSGVSGLTILMWLYKKYTGRDFP 114

GO:0012511 "monolayer-surrounded lipid storage body" evidence=IEA

GO:0016020 "membrane" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0019915 "lipid storage" evidence=ISS

GO:0019953 "sexual reproduction" evidence=ISS

GO:0045735 "nutrient reservoir activity" evidence=ISS

GO:0008289 "lipid binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q42980	OLEO1_ORYSJ	No assigned EC number	0.5357	0.8904	0.8783	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032135001 SubName- Full=Putative uncharacterized protein (Chromosome chr4 scaffold_6, whole genome shotgun sequence); (146 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	146
pfam01277	118	pfam01277, Oleosin, Oleosin	5e-41

>gnl|CDD|110290 pfam01277, Oleosin, Oleosin

 Score =  132 bits (334), Expect = 5e-41
 Identities = 61/118 (51%), Positives = 82/118 (69%)

Query: 18  STPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVG 77
           ST   +  +TA   GG+LL L+GLTL GTVI L +ATP+ V+FSP+LVPAAIA+ LA  G
Sbjct: 1   STSQVLAVVTALPAGGSLLVLAGLTLAGTVIGLAVATPLFVIFSPVLVPAAIAIGLAVTG 60

Query: 78  FLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQYV 135
           FL SG  G+T ++ LSW+  YV+GKHPP  D LDYA+ ++ + A    ++ KE GQ +
Sbjct: 61  FLASGAFGLTGLSSLSWLLKYVRGKHPPVPDQLDYAKRRLQEAAEYAGQKTKEMGQRI 118

Length = 118

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
PF01277	118	Oleosin: Oleosin; InterPro: IPR000136 Oleosins []	100.0
PF01277	118	Oleosin: Oleosin; InterPro: IPR000136 Oleosins []	96.83
PF11990	121	DUF3487: Protein of unknown function (DUF3487); In	93.43
PF08006	181	DUF1700: Protein of unknown function (DUF1700); In	93.22
PF04156	191	IncA: IncA protein; InterPro: IPR007285 Chlamydia	92.2
PRK09459	76	pspG phage shock protein G; Reviewed	90.35
PF02987	44	LEA_4: Late embryogenesis abundant protein; InterP	87.55
PF05957	94	DUF883: Bacterial protein of unknown function (DUF	87.27
PF12732	74	YtxH: YtxH-like protein; InterPro: IPR024623 This	86.16
PF05957	94	DUF883: Bacterial protein of unknown function (DUF	84.04
PF07178	95	TraL: TraL protein; InterPro: IPR009838 This entry	82.88
PRK10414	244	biopolymer transport protein ExbB; Provisional	82.05
PRK10801	227	colicin uptake protein TolQ; Provisional	81.29

>PF01277 Oleosin: Oleosin; InterPro: IPR000136 Oleosins [] are the proteinaceous components of plants' lipid storage bodies called oil bodies

Probab=100.00  E-value=6.8e-53  Score=319.38  Aligned_cols=118  Identities=56%  Similarity=0.943  Sum_probs=116.6

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 045010           18 STPLAVKFLTAATIGGTLLFLSGLTLTGTVIALIMATPVLVLFSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYS   97 (146)
Q Consensus        18 ss~qvl~~~~~~~~gg~LL~LaGlTL~gt~i~L~vaTPLfvifSPVLVPAai~~~l~~~gfl~sg~~g~tals~lsW~~~   97 (146)
                      |++|+++++++++++++||+|+|+||+||++||+++||||+||||||||++|+++|+++||++||+||++++++++|+||
T Consensus         1 s~~qvl~~~~~~~~gg~LL~LaGlTL~gtvigL~vatPLfvifSPVlVPaai~~~l~~~Gfl~sg~~g~~~ls~lsW~~~   80 (118)
T PF01277_consen    1 STSQVLAVVTLLPAGGTLLVLAGLTLAGTVIGLAVATPLFVIFSPVLVPAAIAIGLAVAGFLTSGAFGLTALSSLSWMYN   80 (118)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhcCCCCCCCchHHHHHHHhhhhHHhhHHHHHHhHHH
Q 045010           98 YVKGKHPPGADHLDYARTKIADKARDMTERAKEYGQYV  135 (146)
Q Consensus        98 y~~g~~p~g~~~~d~Ar~ri~d~a~~v~~kake~Gq~i  135 (146)
                      |+||+||+++||+|+||+|++|+++|++||+||+||+|
T Consensus        81 y~rg~~~~~~~q~d~Ak~ri~d~a~~v~~kake~gq~~  118 (118)
T PF01277_consen   81 YFRGRHPPGPDQLDYAKRRIADTASYVGQKAKEVGQKI  118 (118)
T ss_pred             HhccCCCCCCccHHHHHHHHHHHHHHHHHHHHHhCccC
Confidence            99999999999999999999999999999999999985

Oil bodies are small droplets (0.2 to 1.5 mu-m in diameter) containing mostly triacylglycerol that are surrounded by a phospholipid/ oleosin annulus. Oleosins may have a structural role in stabilising the lipid body during dessication of the seed, by preventing coalescence of the oil. They may also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth. Oleosins are found in the monolayer lipid/ water interface of oil bodies and probably interact with both the lipid and phospholipid moieties. Oleosins are proteins of 16 Kd to 24 Kd and are composed of three domains: an N-terminal hydrophilic region of variable length (from 30 to 60 residues); a central hydrophobic domain of about 70 residues and a C-terminal amphipathic region of variable length (from 60 to 100 residues). The central hydrophobic domain is proposed to be made up of beta-strand structure and to interact with the lipids []. It is the only domain whose sequence is conserved.; GO: 0012511 monolayer-surrounded lipid storage body, 0016021 integral to membrane

>PF01277 Oleosin: Oleosin; InterPro: IPR000136 Oleosins [] are the proteinaceous components of plants' lipid storage bodies called oil bodies

Probab=96.83  E-value=0.1  Score=40.16  Aligned_cols=102  Identities=26%  Similarity=0.259  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHhhhhhH---HHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHhhcCCCCCCC
Q 045010           34 TLLFLSGLTLTGTVIALIMATPVLVLFSPILV---PAAIAVFLATVGFLVSGG--CGVTAITVLSWIYSYVKGKHPPGAD  108 (146)
Q Consensus        34 ~LL~LaGlTL~gt~i~L~vaTPLfvifSPVLV---PAai~~~l~~~gfl~sg~--~g~tals~lsW~~~y~~g~~p~g~~  108 (146)
                      +++...|..|.=+-+-|+-+.=-+++.+|++|   |.-+-++.++ ++..+|-  .|.-+++.++|+-.-.+--+-..+.
T Consensus        10 ~~~~~gg~LL~LaGlTL~gtvigL~vatPLfvifSPVlVPaai~~-~l~~~Gfl~sg~~g~~~ls~lsW~~~y~rg~~~~   88 (118)
T PF01277_consen   10 TLLPAGGTLLVLAGLTLAGTVIGLAVATPLFVIFSPVLVPAAIAI-GLAVAGFLTSGAFGLTALSSLSWMYNYFRGRHPP   88 (118)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCCC
Confidence            44444455554444444544445899999887   6555554443 4444443  4555788999999988766655444


Q ss_pred             chHHHHHHHhhhhHHhhHHHHHHhHHHHHHhHhhhc
Q 045010          109 HLDYARTKIADKARDMTERAKEYGQYVQQKAQEATQ  144 (146)
Q Consensus       109 ~~d~Ar~ri~d~a~~v~~kake~Gq~iq~ka~~a~~  144 (146)
                      ..        |.-++.++|-+|..+|+.+|+||.++
T Consensus        89 ~~--------~q~d~Ak~ri~d~a~~v~~kake~gq  116 (118)
T PF01277_consen   89 GP--------DQLDYAKRRIADTASYVGQKAKEVGQ  116 (118)
T ss_pred             CC--------ccHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            43        33455566666777777778887764

Oil bodies are small droplets (0.2 to 1.5 mu-m in diameter) containing mostly triacylglycerol that are surrounded by a phospholipid/ oleosin annulus. Oleosins may have a structural role in stabilising the lipid body during dessication of the seed, by preventing coalescence of the oil. They may also provide recognition signals for specific lipase anchorage in lipolysis during seedling growth. Oleosins are found in the monolayer lipid/ water interface of oil bodies and probably interact with both the lipid and phospholipid moieties. Oleosins are proteins of 16 Kd to 24 Kd and are composed of three domains: an N-terminal hydrophilic region of variable length (from 30 to 60 residues); a central hydrophobic domain of about 70 residues and a C-terminal amphipathic region of variable length (from 60 to 100 residues). The central hydrophobic domain is proposed to be made up of beta-strand structure and to interact with the lipids []. It is the only domain whose sequence is conserved.; GO: 0012511 monolayer-surrounded lipid storage body, 0016021 integral to membrane

>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised

Probab=93.43  E-value=0.46  Score=36.29  Aligned_cols=49  Identities=18%  Similarity=0.181  Sum_probs=34.1

Q ss_pred             HHHHHHHHHHhhhhHHHhhhh-hHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhcC
Q 045010           43 LTGTVIALIMATPVLVLFSPI-LVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGK  102 (146)
Q Consensus        43 L~gt~i~L~vaTPLfvifSPV-LVPAai~~~l~~~gfl~sg~~g~tals~lsW~~~y~~g~  102 (146)
                      ..++++|+.++.|+-++++++ .+|..+.++.+..-++.           -.|+-++-|||
T Consensus        31 ~~~~~~g~~~gl~la~~~g~~a~~pt~~ll~~~~~v~~g-----------g~~l~rlKRGK   80 (121)
T PF11990_consen   31 GVGFVAGLVVGLPLALLTGWWAMIPTGALLGPILGVFVG-----------GKLLARLKRGK   80 (121)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------HHHHHHHHcCC
Confidence            357788889999999999988 67877666665544433           25666666653

This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.

>PF08006 DUF1700: Protein of unknown function (DUF1700); InterPro: IPR012963 This family contains many hypothetical bacterial proteins and two putative membrane proteins (Q6GFD0 from SWISSPROT and Q6G806 from SWISSPROT)

Probab=93.22  E-value=2.8  Score=32.64  Aligned_cols=24  Identities=33%  Similarity=0.450  Sum_probs=11.1

Q ss_pred             HHHHHHHHHHHHhhhhHHHhhhhhH
Q 045010           41 LTLTGTVIALIMATPVLVLFSPILV   65 (146)
Q Consensus        41 lTL~gt~i~L~vaTPLfvifSPVLV   65 (146)
                      +.+...++++.++.. .++++|++.
T Consensus       101 ~~~~~~~~~~~i~~~-~~i~~~~~l  124 (181)
T PF08006_consen  101 IVLILLVLALIIAVI-AFILSGIIL  124 (181)
T ss_pred             HHHHHHHHHHHHHHH-HHHHHHHHH
Confidence            334444555555443 345555544

>PF04156 IncA: IncA protein; InterPro: IPR007285 Chlamydia trachomatis is an obligate intracellular bacterium that develops within a parasitophorous vacuole termed an inclusion

Probab=92.20  E-value=4.5  Score=31.43  Aligned_cols=15  Identities=40%  Similarity=0.211  Sum_probs=7.1

Q ss_pred             hHHHhhhhhHHHHHH
Q 045010           56 VLVLFSPILVPAAIA   70 (146)
Q Consensus        56 LfvifSPVLVPAai~   70 (146)
                      +-.++|+++..+.++
T Consensus        33 l~~~~s~~lg~~~lA   47 (191)
T PF04156_consen   33 LGALISFILGIALLA   47 (191)
T ss_pred             hHHHHHHHHHHHHHH
Confidence            445555555444433

The inclusion is nonfusogenic with lysosomes but intercepts lipids from a host cell exocytic pathway. Initiation of chlamydial development is concurrent with modification of the inclusion membrane by a set of C. trachomatis-encoded proteins collectively designated Incs. One of these Incs, IncA (Inclusion membrane protein A), is functionally associated with the homotypic fusion of inclusions [].

>PRK09459 pspG phage shock protein G; Reviewed

Probab=90.35  E-value=3.6  Score=29.72  Aligned_cols=27  Identities=37%  Similarity=0.559  Sum_probs=21.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHh
Q 045010           34 TLLFLSGLTLTGTVIALIMATPVLVLF   60 (146)
Q Consensus        34 ~LL~LaGlTL~gt~i~L~vaTPLfvif   60 (146)
                      ..|+++|+|+.|...++.+++-+..+.
T Consensus        12 ~~LlvTGiSllgv~aAl~va~~vM~l~   38 (76)
T PRK09459         12 VMLLVTGISLLGIIAALGVATLVMFLG   38 (76)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            457789999999999998887665543

>PF02987 LEA_4: Late embryogenesis abundant protein; InterPro: IPR004238 Different types of late embryogenesis abundant (LEA) proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress

Probab=87.55  E-value=1.5  Score=27.56  Aligned_cols=32  Identities=28%  Similarity=0.327  Sum_probs=14.5

Q ss_pred             HHHHHHHhhhhHHhhHHHHHHhHHHHHHhHhh
Q 045010          111 DYARTKIADKARDMTERAKEYGQYVQQKAQEA  142 (146)
Q Consensus       111 d~Ar~ri~d~a~~v~~kake~Gq~iq~ka~~a  142 (146)
                      |+++.+..+.....++|+.|+.++..+|+.|+
T Consensus         2 e~a~~Ka~e~~d~a~~ka~e~kd~a~eKa~ea   33 (44)
T PF02987_consen    2 EAAKEKASEAKDAAKEKAGEAKDAAAEKAEEA   33 (44)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34444444444444444444444444444443

The function of these proteins is unknown. This entry represents a repeat characteristic of some LEA proteins, including LEA3 [, ].

>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD

Probab=87.27  E-value=0.91  Score=32.14  Aligned_cols=37  Identities=24%  Similarity=0.404  Sum_probs=24.9

Q ss_pred             CCchHHHHHHHhhhhHHhhHHHHHHhHHHHHHhHhhh
Q 045010          107 ADHLDYARTKIADKARDMTERAKEYGQYVQQKAQEAT  143 (146)
Q Consensus       107 ~~~~d~Ar~ri~d~a~~v~~kake~Gq~iq~ka~~a~  143 (146)
                      .+..+.+|.|+.+...+..++++|..+.++.++++..
T Consensus        26 ~~~~~~~r~~~~~~~~~a~~~~~~~~~~~~~~~~~~~   62 (94)
T PF05957_consen   26 GEKADEARDRAEEALDDARDRAEDAADQAREQAREAA   62 (94)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4556777777777777777777777766666666543

>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria

Probab=86.16  E-value=5.6  Score=27.07  Aligned_cols=24  Identities=33%  Similarity=0.495  Sum_probs=11.5

Q ss_pred             HHHHHHHhhhhHHhhHHHHHHhHH
Q 045010          111 DYARTKIADKARDMTERAKEYGQY  134 (146)
Q Consensus       111 d~Ar~ri~d~a~~v~~kake~Gq~  134 (146)
                      +.-|.++.+.+.+++++++|+-+.
T Consensus        25 ~e~R~~l~~~~~~~~~~~~~~~~~   48 (74)
T PF12732_consen   25 KETREKLKDKAEDLKDKAKDLYEE   48 (74)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHH
Confidence            344555555555555444444433

Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.

>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD

Probab=84.04  E-value=1.9  Score=30.52  Aligned_cols=36  Identities=28%  Similarity=0.378  Sum_probs=29.8

Q ss_pred             CCchHHHHHHHhhhhHHhhHHHHHHhHHHHHHhHhh
Q 045010          107 ADHLDYARTKIADKARDMTERAKEYGQYVQQKAQEA  142 (146)
Q Consensus       107 ~~~~d~Ar~ri~d~a~~v~~kake~Gq~iq~ka~~a  142 (146)
                      .+.++.+|.++.|..+++.+++++...+..+.++|.
T Consensus        37 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~V~e~   72 (94)
T PF05957_consen   37 EEALDDARDRAEDAADQAREQAREAAEQTEDYVREN   72 (94)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence            356888999999999999999988888888877763

>PF07178 TraL: TraL protein; InterPro: IPR009838 This entry represents bacterial TraL proteins

Probab=82.88  E-value=4.6  Score=29.03  Aligned_cols=34  Identities=29%  Similarity=0.349  Sum_probs=23.0

Q ss_pred             HHHHHHHhhh-hhHHHHHHHHHHHHHHhhcCCCCC
Q 045010           73 LATVGFLVSG-GCGVTAITVLSWIYSYVKGKHPPG  106 (146)
Q Consensus        73 l~~~gfl~sg-~~g~tals~lsW~~~y~~g~~p~g  106 (146)
                      ..+.|++.+. ..|+..-..+.|.||+++.++|.|
T Consensus        29 ~~~~gi~~~~~~~g~i~g~~~~~~~~k~K~~~~~g   63 (95)
T PF07178_consen   29 LFVIGILSGHFLIGLILGIVLWWGYRKFKKGRGRG   63 (95)
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHHHHccCCcc
Confidence            3344555554 356666667899999999888753

TraL is a predicted peripheral membrane protein involved in bacterial sex pilus assembly []. TraL is part of the type IV secretion system for conjugative plasmid transfer []. The exact function of TraL is unknown.; GO: 0000746 conjugation, 0019867 outer membrane

>PRK10414 biopolymer transport protein ExbB; Provisional

Probab=82.05  E-value=25  Score=29.58  Aligned_cols=69  Identities=20%  Similarity=0.200  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHhhhhHHH---hhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhcCCCCCCCchHHHHHHHhh
Q 045010           43 LTGTVIALIMATPVLVL---FSPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKGKHPPGADHLDYARTKIAD  119 (146)
Q Consensus        43 L~gt~i~L~vaTPLfvi---fSPVLVPAai~~~l~~~gfl~sg~~g~tals~lsW~~~y~~g~~p~g~~~~d~Ar~ri~d  119 (146)
                      |.|||+|++-+.--+=.   -+|-.|-.+|.-+|.++      ++|+..--.-...|||++.+       +|.-..+|.+
T Consensus       145 LlGTV~Gmi~aF~~ia~~g~~~~~~va~GI~eALitT------a~GL~vAIPAliayn~f~~r-------i~~~~~~me~  211 (244)
T PRK10414        145 LFGTVWGIMNSFIGIAQTQTTNLAVVAPGIAEALLAT------AIGLVAAIPAVVIYNVFARQ-------IGGYKAMLGD  211 (244)
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHH
Confidence            56888888875332210   25666666666666554      34555555566899999753       3444445544


Q ss_pred             hhHHh
Q 045010          120 KARDM  124 (146)
Q Consensus       120 ~a~~v  124 (146)
                      .+.+.
T Consensus       212 ~a~~l  216 (244)
T PRK10414        212 VAAQV  216 (244)
T ss_pred             HHHHH
Confidence            44443

>PRK10801 colicin uptake protein TolQ; Provisional

Probab=81.29  E-value=24  Score=29.16  Aligned_cols=53  Identities=25%  Similarity=0.217  Sum_probs=29.8

Q ss_pred             HHHHHHHHHHhhhhHHHh---hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHhhc
Q 045010           43 LTGTVIALIMATPVLVLF---SPILVPAAIAVFLATVGFLVSGGCGVTAITVLSWIYSYVKG  101 (146)
Q Consensus        43 L~gt~i~L~vaTPLfvif---SPVLVPAai~~~l~~~gfl~sg~~g~tals~lsW~~~y~~g  101 (146)
                      |.|||+|++-+.--+=.-   +|-.+-.+|..+|.++      ++|+..-=.-...|||+..
T Consensus       139 LlGTV~Gmi~aF~~i~~~g~~~~~~~a~GI~~ALitT------a~GL~vAIPAli~yN~f~~  194 (227)
T PRK10801        139 LFGTVWGIMHAFIALGAVKQATLQMVAPGIAEALIAT------AIGLFAAIPAVMAYNRLNQ  194 (227)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH
Confidence            568888887753222110   3444444555555443      3455544455578999974

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00