Citrus Sinensis ID: 045038

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------29
Protein Sequence
LYTISTVVLVLQGVYYDHIFKRLKGRHTKATRREEEEKKPLAPKSGDAAIPIPKASVKSSPRREYYYTSARSLASSGTPPFRTFLRAAQSGPSALGLDNDSSSDDEAAAAAPTLSSSGNPPTSQPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKKSADYGEDDDGDYVDATKAND
Secondary Structure (PSIPRED)
cEEEEEEHHHHHHHEEcccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHccccccccccccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccc
Coil and Loop (DISEMBL)
LYTISTVVLVLQGVYYDHIFKRLKGrhtkatrreeeekkplapksgdaaipipkasvkssprreyyYTSARslassgtppfRTFLRAAqsgpsalgldndsssddeaaaaaptlsssgnpptsqprpiprsagygtflaasvnlpfqsNALAGAMAAgfhsrtllngnnmehsAFGQWLGWLMAAIYMGGRLPQIWLNIkrgsveglnPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRkksadygedddgdyvdatkand
Flexible Loop (DISEMBL)
LYTISTVVLVLQgvyydhifkrlkgrhtkatrreeeekkplapksgdaaipipkasvkssprrEYYYTSArslassgtPPFRTFLRAAQSGPSALGLDNDSSSDDEAAAAaptlsssgnpptsqPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKksadygedddgdyvdatkand
Low Complexity Region (SEG)
LYTISTVVLVLQGVYYDHIFKRLKGRHTKATrreeeekkPLAPKSGDAAIPIPKASVKSSPRREYYYTSARSLASSGTPPFRTFLRAAQSGPSALGLdndsssddeaaaaaptlsssGNPPTSQPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKKSAdygedddgdyvdATKAND
Disordered region (IsUnstruct)
************************************************************************************************************************************GYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKK********************
Disordered Region (DISOPRED)
LYTISTVVLVLQGVYYDHIFK******************************************************************************************************QPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGF**RTLLNGNNMEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIY***************************
Disordered Region (DISEMBL)
LYTISTVVLVLQGVYYDHIFKRLK*********************GDAAIPIPKASVKSSPRREYYYTSARSLASSGTPPFRTFLRAAQS************************************PIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKKSADYGEDDDGDYVDATKAND
Disordered Region (DISPRO)
LYTISTVVLVLQGVYYDHIFKRLK*****************************************************************************************************RPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFH*********MEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYF***********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
LYTISTVVLVLQGVYYDHIFKRLKGRHTKATRREEEEKKPLAPKSGDAAIPIPKASVKSSPRREYYYTSARSLASSGTPPFRTFLRAAQSGPSALGLDNDSSSDDEAAAAAPTLSSSGNPPTSQPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKKSADYGEDDDGDYVDATKAND
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	289	2.2.26 [Sep-21-2011]
Q12010	308	Uncharacterized membrane	yes	no	0.342	0.321	0.353	7e-14
Q95XZ6	311	Lysosomal amino acid tran	yes	no	0.311	0.289	0.4	5e-12
Q10482	271	Seven transmembrane prote	yes	no	0.294	0.313	0.390	2e-08
P38279	296	Protein RTC2 OS=Saccharom	no	no	0.266	0.260	0.340	3e-08
Q06328	317	Vacuolar integral membran	no	no	0.311	0.283	0.322	5e-08
Q5ZJX0	303	Lysosomal amino acid tran	no	no	0.311	0.297	0.294	5e-08
Q6ZP29	291	Lysosomal amino acid tran	no	no	0.391	0.388	0.285	0.0005

>sp|Q12010|YO092_YEAST Uncharacterized membrane protein YOL092W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YOL092W PE=1 SV=1

 Score = 78.2 bits (191), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 61/99 (61%)

Query: 170 MEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVR 229
           ++ +   Q  G+L A +Y+G R+PQI LN KR S EG++ L F+FA + N T++ S++V 
Sbjct: 206 LQINWMAQIFGYLSALLYLGSRIPQILLNFKRKSCEGISFLFFLFACLGNTTFIFSVIVI 265

Query: 230 TTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRK 268
           + +W+ +  N  WL+ +I  + +D  I  Q+  Y+  +K
Sbjct: 266 SLDWKYLIMNASWLVGSIGTLFMDFVIFSQFFIYKRNKK 304

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q95XZ6|LAAT1_CAEEL Lysosomal amino acid transporter 1 OS=Caenorhabditis elegans GN=laat-1 PE=1 SV=2

 Score = 71.6 bits (174), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 51/90 (56%)

Query: 175 FGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWE 234
            G  +G + A  Y GGR+PQI  N +  S EGL+  MF   + AN TY +S+++ TT W 
Sbjct: 200 LGYIIGSMAAVCYFGGRIPQIIKNYRHSSCEGLSLTMFYIIVAANFTYGISVLLATTSWL 259

Query: 235 SIKANMPWLLDAIVCVLLDLFIILQYIYYR 264
            +  ++PWL  ++ C   D  II QY  YR
Sbjct: 260 YLLRHLPWLAGSLGCCCFDAVIISQYYLYR 289

Lysosomal lysine/arginine transporter that specifically mediates the export of lysine and arginine from lysosomes.

Caenorhabditis elegans (taxid: 6239)

>sp|Q10482|STM1_SCHPO Seven transmembrane protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=stm1 PE=1 SV=1

 Score = 60.1 bits (144), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 180 GWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVV--RTTEWESIK 237
           G + + +Y   R+PQI  N K  S EGL+ + FV A V N +Y  SI+V   +       
Sbjct: 182 GCISSVLYFCARIPQIIKNHKAKSTEGLSIIFFVLASVGNTSYAFSILVFPASDYLNYTY 241

Query: 238 ANMPWLLDAIVCVLLDLFIILQYIYYR 264
           AN+PW+L A   + LD++I  Q+I YR
Sbjct: 242 ANLPWILGAFSTIFLDIYIFYQFIKYR 268

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|P38279|RTC2_YEAST Protein RTC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RTC2 PE=1 SV=1

 Score = 59.3 bits (142), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 52/88 (59%), Gaps = 11/88 (12%)

Query: 176 GQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWES 235
            Q LG+L A +Y+G R+PQI LN KR S EG++ L F+FA + N ++++S++  +     
Sbjct: 208 AQILGYLSAILYLGSRIPQIVLNFKRKSCEGVSFLFFLFACLGNTSFIISVLSAS----- 262

Query: 236 IKANMPWLLDAIVCVLLDLFIILQYIYY 263
                 WL+ +   +L+D  + +Q+  Y
Sbjct: 263 ------WLIGSAGTLLMDFTVFIQFFLY 284

Required for optimal growth in synthetic medium.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q06328|YD352_YEAST Vacuolar integral membrane protein YDR352W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR352W PE=1 SV=1

 Score = 58.5 bits (140), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 171 EHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRT 230
           ++S  G  L W+ A+ Y+G R+PQ+  N  R S +GL+P +F   L+ N+TY LSI    
Sbjct: 180 KNSQLGTILSWIGASFYVGARIPQLIKNYNRKSTDGLSPFLFATTLLCNITYNLSIFTSC 239

Query: 231 ------TEWESIKANMPWLLDAIVCVLLDLFIILQY 260
                  + E I   +P++  +   +  DL    QY
Sbjct: 240 RFLDNQNKREFIVNELPFIFGSAGTIAFDLIYFYQY 275

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q5ZJX0|LAAT1_CHICK Lysosomal amino acid transporter 1 homolog OS=Gallus gallus GN=PQLC2 PE=2 SV=1

 Score = 58.5 bits (140), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 56/95 (58%), Gaps = 5/95 (5%)

Query: 175 FGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRT---- 230
            G  +G + + +Y+  RLPQI+ N +R S  G++ L+F   ++ N+ Y  S++++     
Sbjct: 189 IGFAIGSISSVLYLCSRLPQIYTNYRRKSTAGVSFLLFALVMLGNLLYGTSVLLKNPEPG 248

Query: 231 -TEWESIKANMPWLLDAIVCVLLDLFIILQYIYYR 264
            +E + I  ++PWL+ ++  + LD+ I  Q++ YR
Sbjct: 249 QSEGDYILHHLPWLIGSLGVLSLDVIISFQFLAYR 283

Gallus gallus (taxid: 9031)

>sp|Q6ZP29|LAAT1_HUMAN Lysosomal amino acid transporter 1 homolog OS=Homo sapiens GN=PQLC2 PE=1 SV=1

 Score = 45.4 bits (106), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 65/126 (51%), Gaps = 13/126 (10%)

Query: 152 AGAMAA---GFHSRTLLNGNN-----MEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGS 203
           AG +AA    F  R LL+  +           G  +G + + +Y+  RLPQI  N  R S
Sbjct: 152 AGPVAAPREAFRGRALLSVESGSKPFTRQEVIGFVIGSISSVLYLLSRLPQIRTNFLRKS 211

Query: 204 VEGLNPLMFVFALVANVTYVLSIVVRT-----TEWESIKANMPWLLDAIVCVLLDLFIIL 258
            +G++  +F   ++ N  Y LS++++      +E   +  ++PWL+ ++  +LLD  I +
Sbjct: 212 TQGISYSLFALVMLGNTLYGLSVLLKNPEEGQSEGSYLLHHLPWLVGSLGVLLLDTIISI 271

Query: 259 QYIYYR 264
           Q++ YR
Sbjct: 272 QFLVYR 277

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
255585136	377	conserved hypothetical protein [Ricinus	0.965	0.740	0.706	1e-114
240256209	392	PQ-loop repeat family protein / transmem	0.975	0.719	0.641	1e-100
359476730	381	PREDICTED: uncharacterized membrane prot	0.965	0.732	0.673	4e-97
356496804	385	PREDICTED: protein RTC2-like [Glycine ma	0.961	0.722	0.649	9e-94
217072372	380	unknown [Medicago truncatula] gi|3885193	0.944	0.718	0.632	2e-92
357483221	380	Membrane protein, putative [Medicago tru	0.944	0.718	0.632	2e-92
297798210	375	hypothetical protein ARALYDRAFT_490949 [	0.920	0.709	0.623	4e-92
357483219	382	Membrane protein, putative [Medicago tru	0.944	0.714	0.627	7e-91
227204229	376	AT4G36850 [Arabidopsis thaliana]	0.871	0.670	0.641	5e-89
449461411	381	PREDICTED: uncharacterized membrane prot	0.955	0.724	0.643	2e-87

>gi|255585136|ref|XP_002533273.1| conserved hypothetical protein [Ricinus communis] gi|223526898|gb|EEF29105.1| conserved hypothetical protein [Ricinus communis]

 Score =  416 bits (1068), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/286 (70%), Positives = 231/286 (80%), Gaps = 7/286 (2%)

Query: 1   LYTISTVVLVLQGVYYDHIFKRLKGRHTKATRREEEEKKPLAPKSGDAAIPIPKASVKSS 60
           LYT ST+VLVLQG+YYD+I++  KG+  +  ++ E+EKKPL PK GD+ IPIP AS +S+
Sbjct: 99  LYTTSTIVLVLQGLYYDYIYRWWKGQKNEVNQQVEDEKKPLKPKLGDSGIPIPNASTRST 158

Query: 61  PRREYYYTSARSLASSGTPPFRTFLRAAQSGPSALGLDNDSSSDDEAAAAAPTLSSSGNP 120
           PRREYYYTSARS+ASSGTPPFR +LR A+SGPSA+G D++SSS D+ AA     S     
Sbjct: 159 PRREYYYTSARSMASSGTPPFRGYLRTAKSGPSAMGFDHESSSSDDEAAPVSAAS----- 213

Query: 121 PTSQPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQWLG 180
             SQPRPIPRSAGYGTFLA S+NLP QS AL  A       R L  G+ MEHSAFGQWLG
Sbjct: 214 -VSQPRPIPRSAGYGTFLATSLNLPLQSKALTDAYIGVTSRRLLHEGSGMEHSAFGQWLG 272

Query: 181 WLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANM 240
           WLMAAIYMGGR+PQIWLNIKRGSVEGLNPLMF+FALVAN+TYVLSIVVRTTEWESIKANM
Sbjct: 273 WLMAAIYMGGRIPQIWLNIKRGSVEGLNPLMFIFALVANLTYVLSIVVRTTEWESIKANM 332

Query: 241 PWLLDAIVCVLLDLFIILQYIYYRYFRKKSADYGEDDDGDYVDATK 286
           PWLLDA VCV LD FIILQY+YYRYFR+K   +GE D GDY+DA K
Sbjct: 333 PWLLDAAVCVALDFFIILQYVYYRYFREKKMRHGE-DYGDYMDAVK 377

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240256209|ref|NP_568009.5| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] gi|15028159|gb|AAK76703.1| unknown protein [Arabidopsis thaliana] gi|332661309|gb|AEE86709.1| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana]

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/293 (64%), Positives = 228/293 (77%), Gaps = 11/293 (3%)

Query: 1   LYTISTVVLVLQGVYYDHIFKRLKGRHTKATRREEE--EKKPLAP-KSGDAAIPIPKASV 57
           LYT+STVVLV+Q +YYD+I+K  + R TK  +++EE  EK+PL P K+  +AI IP  S 
Sbjct: 100 LYTVSTVVLVIQTIYYDYIYKLCRHRRTKICQKDEEDEEKRPLKPPKTMGSAISIPGGSY 159

Query: 58  KSSPRREYYYTSARSLASSGTPPFRT-FLRAAQSGPSALGLDND--SSSDDEAAAAAPTL 114
           K S RRE+YYTSARSLA SGTPP RT + R A+SGPSAL +DND  SS +DE  +  P +
Sbjct: 160 KDSSRREFYYTSARSLAGSGTPPLRTSYFRVAKSGPSALAIDNDGSSSDEDETMSTCPVI 219

Query: 115 SSSGNPPTSQPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSA 174
           ++      ++PRPIPR AG+GTFLAAS +LP Q+ +LA   A    SR LLN   +EHSA
Sbjct: 220 TAK---TITKPRPIPRQAGFGTFLAASASLPLQAKSLAEKYAHA-SSRRLLNERIVEHSA 275

Query: 175 FGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWE 234
            GQWLGWLMAAIYMGGR+PQIWLNIKRGSVEGLNPLMF+FALVAN TYV SI+VRTTEW+
Sbjct: 276 LGQWLGWLMAAIYMGGRIPQIWLNIKRGSVEGLNPLMFIFALVANATYVGSILVRTTEWD 335

Query: 235 SIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKKSADYGEDDD-GDYVDATK 286
           +IK N+PWLLDAIVCV+LDLFIILQYIYY+Y R KS +  E+D  GDYV+A+K
Sbjct: 336 NIKPNLPWLLDAIVCVVLDLFIILQYIYYKYCRIKSLESREEDAYGDYVEASK 388

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476730|ref|XP_002274448.2| PREDICTED: uncharacterized membrane protein YOL092W-like [Vitis vinifera] gi|297735218|emb|CBI17580.3| unnamed protein product [Vitis vinifera]

 Score =  360 bits (924), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 194/288 (67%), Positives = 223/288 (77%), Gaps = 9/288 (3%)

Query: 1   LYTISTVVLVLQGVYYDHIFKRLKGRHTKATRREEEEKKPLAPKSGDAAIPIPKASVKS- 59
           LYT STVVLVLQ VYYD I+   K     + +  EEE+KPL PK+G + IPIP   VK+ 
Sbjct: 99  LYTTSTVVLVLQSVYYDDIYPWWKYGQINSNQVVEEERKPLKPKAGGSGIPIPNTPVKAG 158

Query: 60  SPRREYYYTSARSLASSGTPPFRTFLRAAQSGPSALGLDNDSSSDDEAAAAAPTLSSSGN 119
           S  R+YYYTSARSLA S TPPFR++LR A+SGPS +GLDNDSSSDD+    A       +
Sbjct: 159 STLRDYYYTSARSLAGSTTPPFRSYLRTARSGPSTVGLDNDSSSDDDTTHVA------SH 212

Query: 120 PPTSQPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQWL 179
              S+P+PIPRSAGYG +LA SVNLP QS A+   ++ GF  R LL+ + ME+SAFGQWL
Sbjct: 213 KTVSKPKPIPRSAGYGAYLATSVNLPRQSKAMM-EVSLGFTGRKLLHESGMENSAFGQWL 271

Query: 180 GWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKAN 239
           GWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFAL+ANVTYV SI+VRTTEWE IKAN
Sbjct: 272 GWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALIANVTYVASILVRTTEWEKIKAN 331

Query: 240 MPWLLDAIVCVLLDLFIILQYIYYRYFRKKSADYGEDDDGDYVDATKA 287
           MPWLLDA VCV+LDLFIILQYIYY+Y RKK +  GE D GDY+ A KA
Sbjct: 332 MPWLLDAAVCVMLDLFIILQYIYYKYLRKKISSAGE-DLGDYIAANKA 378

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496804|ref|XP_003517255.1| PREDICTED: protein RTC2-like [Glycine max]

 Score =  349 bits (895), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 189/291 (64%), Positives = 218/291 (74%), Gaps = 13/291 (4%)

Query: 1   LYTISTVVLVLQGVYYDHIFKRLK--GRHTKATRREEEEKKPLAPKSG-DAAIPIPKASV 57
           LYTI+T+VLVLQ  YYD+I+K  K   +       EEEEKKPL  K G D+ IPI     
Sbjct: 99  LYTITTIVLVLQSFYYDYIYKWGKPLRKINIDEAHEEEEKKPLRQKPGRDSGIPIQNDGP 158

Query: 58  KSSPRREYYYTSARSLASSGTPPFRTFLRAAQSGPSALGLDNDSSSDDEAAAAAPTLSSS 117
           K +PRR+YYY SARSLA++ TPPF T+LRAA+S PSA+ ++NDSSSDDEA    P LSS+
Sbjct: 159 KETPRRDYYYRSARSLAANDTPPFGTYLRAAKSVPSAMEMNNDSSSDDEA----PPLSST 214

Query: 118 GNPPTSQPRPIPRS--AGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAF 175
              P +QPRPIPRS  A YGTFLAAS+NLP Q NAL       F+ R LL+  +  HSA 
Sbjct: 215 K--PVTQPRPIPRSVPASYGTFLAASMNLPRQGNALMEGYKR-FNGRKLLSQEHNMHSAL 271

Query: 176 GQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWES 235
           GQWLGWLMA IYMGGRLPQIWLNIKRGSVEGLNPLMF+FAL+AN TYV SI+VRT EWES
Sbjct: 272 GQWLGWLMAVIYMGGRLPQIWLNIKRGSVEGLNPLMFIFALIANATYVGSILVRTIEWES 331

Query: 236 IKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKKSADYGEDDDGDYVDATK 286
           I+ANMPWLLDAIVCV LDLFIILQY  YRY RKK+    + D GDY +A+K
Sbjct: 332 IRANMPWLLDAIVCVALDLFIILQYANYRYVRKKTGS-DDADYGDYKEASK 381

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072372|gb|ACJ84546.1| unknown [Medicago truncatula] gi|388519313|gb|AFK47718.1| unknown [Medicago truncatula]

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 184/291 (63%), Positives = 213/291 (73%), Gaps = 18/291 (6%)

Query: 1   LYTISTVVLVLQGVYYDHIFKRLKGRH-TKATRREEEEKKPLAPKSG-DAAIPIPKASVK 58
           LYTI+T+VLV+Q +YYD+I+K  K R         EEEKKPL PK   +  IPI     +
Sbjct: 99  LYTITTIVLVVQSLYYDYIYKWCKRRQKINIEETYEEEKKPLKPKERFELGIPIRSGRHR 158

Query: 59  SSPRREYYYTSARSLASSGTPPFRTFLRAAQSGPSALGLDNDSSSDDEAAAAAPTLSSSG 118
           + P+ EYYY SARSLA + TPP RT++R A+SGPSA+GL+ DSSSDDEA +         
Sbjct: 159 AIPKPEYYYGSARSLAGNVTPPSRTYMRVAKSGPSAMGLNEDSSSDDEAHSV-------- 210

Query: 119 NPPTSQPRPIPRSAG-YGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQ 177
             P +QPR IPRSAG YGTFLAAS+NLP QSNAL     A    R LL+  ++ HSA GQ
Sbjct: 211 --PATQPRQIPRSAGSYGTFLAASINLPHQSNALKVGYIA-LSGRKLLSQEHVTHSALGQ 267

Query: 178 WLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIK 237
           WLGWLMAAIY GGR+PQIWLNIKRGSVEGLNP MF+FAL+AN TYV SI+VRTTEWESIK
Sbjct: 268 WLGWLMAAIYTGGRIPQIWLNIKRGSVEGLNPFMFIFALIANATYVGSILVRTTEWESIK 327

Query: 238 ANMPWLLDAIVCVLLDLFIILQYIYYRYFRK--KSADYGEDDDGDYVDATK 286
           ANMPWLLDAIVCV LDLFIILQYI YRY RK   S+DYG  +  DY +A K
Sbjct: 328 ANMPWLLDAIVCVALDLFIILQYINYRYHRKTTTSSDYG--NYQDYKEARK 376

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357483221|ref|XP_003611897.1| Membrane protein, putative [Medicago truncatula] gi|355513232|gb|AES94855.1| Membrane protein, putative [Medicago truncatula]

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 184/291 (63%), Positives = 212/291 (72%), Gaps = 18/291 (6%)

Query: 1   LYTISTVVLVLQGVYYDHIFKRLKGRH-TKATRREEEEKKPLAPKSG-DAAIPIPKASVK 58
           LYTI+T+VLV+Q  YYD+I+K  K R         EEEKKPL PK   +  IPI     +
Sbjct: 99  LYTITTIVLVVQSFYYDYIYKWCKRRQKINIEETYEEEKKPLKPKERFELGIPIRSGRHR 158

Query: 59  SSPRREYYYTSARSLASSGTPPFRTFLRAAQSGPSALGLDNDSSSDDEAAAAAPTLSSSG 118
           + P+ EYYY SARSLA + TPP RT++R A+SGPSA+GL+ DSSSDDEA +         
Sbjct: 159 AIPKPEYYYGSARSLAGNVTPPSRTYMRVAKSGPSAMGLNEDSSSDDEAHSV-------- 210

Query: 119 NPPTSQPRPIPRSAG-YGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQ 177
             P +QPR IPRSAG YGTFLAAS+NLP QSNAL     A    R LL+  ++ HSA GQ
Sbjct: 211 --PATQPRQIPRSAGSYGTFLAASINLPHQSNALKVGYIA-LSGRKLLSQEHVTHSALGQ 267

Query: 178 WLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIK 237
           WLGWLMAAIY GGR+PQIWLNIKRGSVEGLNP MF+FAL+AN TYV SI+VRTTEWESIK
Sbjct: 268 WLGWLMAAIYTGGRIPQIWLNIKRGSVEGLNPFMFIFALIANATYVGSILVRTTEWESIK 327

Query: 238 ANMPWLLDAIVCVLLDLFIILQYIYYRYFRK--KSADYGEDDDGDYVDATK 286
           ANMPWLLDAIVCV LDLFIILQYI YRY RK   S+DYG  +  DY +A K
Sbjct: 328 ANMPWLLDAIVCVALDLFIILQYINYRYHRKTTTSSDYG--NYQDYKEARK 376

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798210|ref|XP_002866989.1| hypothetical protein ARALYDRAFT_490949 [Arabidopsis lyrata subsp. lyrata] gi|297312825|gb|EFH43248.1| hypothetical protein ARALYDRAFT_490949 [Arabidopsis lyrata subsp. lyrata]

 Score =  343 bits (881), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 182/292 (62%), Positives = 216/292 (73%), Gaps = 26/292 (8%)

Query: 1   LYTISTVVLVLQGVYYDHIFKRLKGRHTKATRREEE--EKKPLAP-KSGDAAIPIPKASV 57
           LYT+STVVLV+Q +YYD+I+K  +   TK   +EEE  EK+PL P K+  +AI IP  S 
Sbjct: 100 LYTVSTVVLVIQTIYYDYIYKLCRHGRTKICPKEEEDEEKRPLKPPKTMGSAISIPGGSY 159

Query: 58  KSSPRREYYYTSARSLASSGTPPFRT-FLRAAQSGPSALGLDNDSSSD-DEAAAAAPTLS 115
           K SPRRE+YYTSARSLA SGTPP RT + R A+SGPSAL +DN SSS+ DEA +  P   
Sbjct: 160 KDSPRREFYYTSARSLAGSGTPPLRTSYFRVAKSGPSALAIDNGSSSEEDEAMSTCP--- 216

Query: 116 SSGNPPTSQPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAF 175
                           AG+GTFLAAS +LP Q+ +LA        SR LLN   +EHSA 
Sbjct: 217 ----------------AGFGTFLAASASLPLQAKSLAENYWHA-SSRRLLNERRVEHSAL 259

Query: 176 GQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWES 235
           GQWLGWLMAAIYMGGR+PQIWLNIKRGSVEGLNPLMF+FALVAN TYV SI+VRTTEW++
Sbjct: 260 GQWLGWLMAAIYMGGRIPQIWLNIKRGSVEGLNPLMFIFALVANATYVGSILVRTTEWDN 319

Query: 236 IKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKKSADYGEDDD-GDYVDATK 286
           IK N+PWLLDAIVCV+LDLFIILQYIYY+Y R +S +  E+D  GDYV+A+K
Sbjct: 320 IKPNLPWLLDAIVCVVLDLFIILQYIYYKYCRMQSLERKEEDVYGDYVEASK 371

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357483219|ref|XP_003611896.1| Membrane protein, putative [Medicago truncatula] gi|355513231|gb|AES94854.1| Membrane protein, putative [Medicago truncatula]

 Score =  339 bits (870), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 184/293 (62%), Positives = 212/293 (72%), Gaps = 20/293 (6%)

Query: 1   LYTISTVVLVLQGVYYDHIFKRLKGRH-TKATRREEEEKKPLAPKSG-DAAIPIPKASVK 58
           LYTI+T+VLV+Q  YYD+I+K  K R         EEEKKPL PK   +  IPI     +
Sbjct: 99  LYTITTIVLVVQSFYYDYIYKWCKRRQKINIEETYEEEKKPLKPKERFELGIPIRSGRHR 158

Query: 59  SSPRREYYYTSARSLASSGTPPFRTFLRAAQSGPSALGLDNDSSSDDEAAAAAPTLSSSG 118
           + P+ EYYY SARSLA + TPP RT++R A+SGPSA+GL+ DSSSDDEA +         
Sbjct: 159 AIPKPEYYYGSARSLAGNVTPPSRTYMRVAKSGPSAMGLNEDSSSDDEAHSV-------- 210

Query: 119 NPPTSQPRPIPRSAG-YGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQ 177
             P +QPR IPRSAG YGTFLAAS+NLP QSNAL     A    R LL+  ++ HSA GQ
Sbjct: 211 --PATQPRQIPRSAGSYGTFLAASINLPHQSNALKVGYIA-LSGRKLLSQEHVTHSALGQ 267

Query: 178 WLGWLMAAIYMGGRLPQIWLN--IKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWES 235
           WLGWLMAAIY GGR+PQIWLN  IKRGSVEGLNP MF+FAL+AN TYV SI+VRTTEWES
Sbjct: 268 WLGWLMAAIYTGGRIPQIWLNVRIKRGSVEGLNPFMFIFALIANATYVGSILVRTTEWES 327

Query: 236 IKANMPWLLDAIVCVLLDLFIILQYIYYRYFRK--KSADYGEDDDGDYVDATK 286
           IKANMPWLLDAIVCV LDLFIILQYI YRY RK   S+DYG  +  DY +A K
Sbjct: 328 IKANMPWLLDAIVCVALDLFIILQYINYRYHRKTTTSSDYG--NYQDYKEARK 378

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|227204229|dbj|BAH56966.1| AT4G36850 [Arabidopsis thaliana]

 Score =  333 bits (854), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 168/262 (64%), Positives = 204/262 (77%), Gaps = 10/262 (3%)

Query: 1   LYTISTVVLVLQGVYYDHIFKRLKGRHTKATRREEE--EKKPLAP-KSGDAAIPIPKASV 57
           LYT+STVVLV+Q +YYD+I+K  + R TK  +++EE  EK+PL P K+  +AI IP  S 
Sbjct: 100 LYTVSTVVLVIQTIYYDYIYKLCRHRRTKICQKDEEGEEKRPLKPPKTMGSAISIPGGSY 159

Query: 58  KSSPRREYYYTSARSLASSGTPPFRT-FLRAAQSGPSALGLDND--SSSDDEAAAAAPTL 114
           K S RRE+YYTSARSLA SGTPP RT + R A+SGPSAL +DND  SS +DE  +  P +
Sbjct: 160 KDSSRREFYYTSARSLAGSGTPPLRTSYFRVAKSGPSALAIDNDGSSSDEDETMSTCPVI 219

Query: 115 SSSGNPPTSQPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSA 174
           ++      ++PRPIPR AG+GTFLAAS +LP Q+ +LA   A    SR LLN   +EHSA
Sbjct: 220 TAK---TITKPRPIPRQAGFGTFLAASASLPLQTKSLAEKYAHA-SSRRLLNERIVEHSA 275

Query: 175 FGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWE 234
            GQWLGWLMAAIYMGGR+PQIWLNIKRGSVEGLNPLMF+FALVAN TYV SI+VRTTEW+
Sbjct: 276 LGQWLGWLMAAIYMGGRIPQIWLNIKRGSVEGLNPLMFIFALVANATYVGSILVRTTEWD 335

Query: 235 SIKANMPWLLDAIVCVLLDLFI 256
           +IK N+PWLLDAIVCV+LDLF+
Sbjct: 336 NIKPNLPWLLDAIVCVVLDLFV 357

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449461411|ref|XP_004148435.1| PREDICTED: uncharacterized membrane protein YOL092W-like [Cucumis sativus]

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 186/289 (64%), Positives = 211/289 (73%), Gaps = 13/289 (4%)

Query: 1   LYTISTVVLVLQGVYYDHIFKRLKGRHTKATRREEEEKKPLAPKSGDA--AIPIPKASVK 58
           LYT++T+VLVLQ VYYD++ K    R  K+    EEEK PL    G     IPIPKAS K
Sbjct: 99  LYTVNTIVLVLQSVYYDYVTKCCIDRKAKSDHTGEEEKTPLKGNKGVGYVGIPIPKASPK 158

Query: 59  SSPRREYYYTSARSLASSGTPPFRTFLRAAQSGPSALGLDNDSSSDDEAAAAAPTLSSSG 118
            +PRRE+YYTSARSLA S TPPFR FLR  +SGPSALG  NDSSS D+ +  A   S S 
Sbjct: 159 PTPRREFYYTSARSLAGSDTPPFRAFLRLPKSGPSALG--NDSSSSDDESDTAAVFSHSA 216

Query: 119 NPPTSQPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFGQW 178
               +QPRPIPRS GYGTFLAAS NLPFQ+   +     GF  R LL  ++  HS FGQ 
Sbjct: 217 ---VTQPRPIPRSVGYGTFLAASANLPFQTKGFSD----GFSGRKLLQEHS-SHSGFGQL 268

Query: 179 LGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKA 238
           LGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFAL+AN TYV SIVVR+TEWESIKA
Sbjct: 269 LGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALIANATYVASIVVRSTEWESIKA 328

Query: 239 NMPWLLDAIVCVLLDLFIIL-QYIYYRYFRKKSADYGEDDDGDYVDATK 286
           NMPWLLDA+VCVLLDLFIIL    Y R+ R++ +  G D+  DY +ATK
Sbjct: 329 NMPWLLDAVVCVLLDLFIILQYIYYRRFRRQRQSGGGRDEFKDYEEATK 377

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	289
TAIR|locus:2115270	392	AT4G36850 "AT4G36850" [Arabido	0.927	0.683	0.616	8.5e-81
TAIR|locus:2063208	376	AT2G41050 "AT2G41050" [Arabido	0.342	0.263	0.606	1.5e-39
TAIR|locus:2119777	288	AT4G20100 "AT4G20100" [Arabido	0.401	0.402	0.541	1.5e-37
SGD|S000005452	308	YPQ1 "Putative vacuolar membra	0.318	0.298	0.380	8.5e-18
WB|WBGene00021546	311	laat-1 [Caenorhabditis elegans	0.307	0.286	0.404	3.3e-14
UNIPROTKB|Q95XZ6	311	laat-1 "Lysosomal amino acid t	0.307	0.286	0.404	3.3e-14
UNIPROTKB|Q2KFS2	325	MGCH7_ch7g613 "Putative unchar	0.314	0.28	0.395	3.1e-13
UNIPROTKB|G4MTC4	417	MGG_04698 "PQ-loop repeat-cont	0.197	0.136	0.526	8.1e-13
CGD|CAL0004748	331	orf19.7370 [Candida albicans (	0.339	0.296	0.357	1.9e-12
UNIPROTKB|Q5A4G4	331	CaO19.7370 "Putative uncharact	0.339	0.296	0.357	1.9e-12

TAIR|locus:2115270 AT4G36850 "AT4G36850" [Arabidopsis thaliana (taxid:3702)]

 Score = 811 (290.5 bits), Expect = 8.5e-81, P = 8.5e-81
 Identities = 169/274 (61%), Positives = 195/274 (71%)

Query:     1 LYTISTVVLVLQGVYYDHIFKRLKGRHTKATXXXXXXXX--PLAP-KSGDAAIPIPKASV 57
             LYT+STVVLV+Q +YYD+I+K  + R TK            PL P K+  +AI IP  S 
Sbjct:   100 LYTVSTVVLVIQTIYYDYIYKLCRHRRTKICQKDEEDEEKRPLKPPKTMGSAISIPGGSY 159

Query:    58 KSSPRREYYYTSARSLASSGTPPFRT-FLRAAQSGPSALGLXXXXXXXXXXXXXXXXXXX 116
             K S RRE+YYTSARSLA SGTPP RT + R A+SGPSAL +                   
Sbjct:   160 KDSSRREFYYTSARSLAGSGTPPLRTSYFRVAKSGPSALAIDNDGSSSDEDETMSTCPVI 219

Query:   117 XGNPPTSQPRPIPRSAGYGTFLAASVNLPFQSNALAGAMAAGFHSRTLLNGNNMEHSAFG 176
                  T +PRPIPR AG+GTFLAAS +LP Q+ +LA   A    SR LLN   +EHSA G
Sbjct:   220 TAKTIT-KPRPIPRQAGFGTFLAASASLPLQAKSLAEKYAHA-SSRRLLNERIVEHSALG 277

Query:   177 QWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESI 236
             QWLGWLMAAIYMGGR+PQIWLNIKRGSVEGLNPLMF+FALVAN TYV SI+VRTTEW++I
Sbjct:   278 QWLGWLMAAIYMGGRIPQIWLNIKRGSVEGLNPLMFIFALVANATYVGSILVRTTEWDNI 337

Query:   237 KANMPWLLDAIVCVLLDLFIILQYIYYRYFRKKS 270
             K N+PWLLDAIVCV+LDLFIILQYIYY+Y R KS
Sbjct:   338 KPNLPWLLDAIVCVVLDLFIILQYIYYKYCRIKS 371

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2063208 AT2G41050 "AT2G41050" [Arabidopsis thaliana (taxid:3702)]

 Score = 321 (118.1 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
 Identities = 60/99 (60%), Positives = 75/99 (75%)

Query:   171 EHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRT 230
             E S  G +LGW MAAIYMGGRLPQI LN++RG VEGLNPLMF FALV N+TYV SI+V +
Sbjct:   265 ESSRIGMFLGWAMAAIYMGGRLPQICLNMRRGHVEGLNPLMFFFALVGNMTYVASILVNS 324

Query:   231 TEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKK 269
              EW  +  N+PWL+DA  CV+LD  I+LQ+ ++R  + K
Sbjct:   325 VEWLKLAPNLPWLVDAGGCVVLDFLILLQFFHFRCRKDK 363

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0016571 "histone methylation" evidence=RCA

TAIR|locus:2119777 AT4G20100 "AT4G20100" [Arabidopsis thaliana (taxid:3702)]

 Score = 341 (125.1 bits), Expect = 1.5e-37, Sum P(2) = 1.5e-37
 Identities = 65/120 (54%), Positives = 86/120 (71%)

Query:   155 MAAGFHSRTLL---NGNNMEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLM 211
             +  G  +R LL   +GN  E++  G WLGW MAAIYMGGRLPQI +N++RG+VEGLNPLM
Sbjct:   156 VVGGAGARKLLEVSSGNLGENNNIGMWLGWAMAAIYMGGRLPQICMNVRRGNVEGLNPLM 215

Query:   212 FVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYYRYFRKKSA 271
             F FA + NVTYV SI+V + EW  I+ N+PWL+D+  C +LD  I+LQ+ Y+ + RK  A
Sbjct:   216 FFFAFIGNVTYVASILVNSVEWSKIEPNLPWLVDSGGCAVLDFLILLQFFYF-HCRKVEA 274

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

SGD|S000005452 YPQ1 "Putative vacuolar membrane transporter for cationic amino acids" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 192 (72.6 bits), Expect = 8.5e-18, Sum P(2) = 8.5e-18
 Identities = 35/92 (38%), Positives = 58/92 (63%)

Query:   177 QWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESI 236
             Q  G+L A +Y+G R+PQI LN KR S EG++ L F+FA + N T++ S++V + +W+ +
Sbjct:   213 QIFGYLSALLYLGSRIPQILLNFKRKSCEGISFLFFLFACLGNTTFIFSVIVISLDWKYL 272

Query:   237 KANMPWLLDAIVCVLLDLFIILQYIYYRYFRK 268
               N  WL+ +I  + +D  I  Q+  Y+  +K
Sbjct:   273 IMNASWLVGSIGTLFMDFVIFSQFFIYKRNKK 304

GO:0000329 "fungal-type vacuole membrane" evidence=IDA

GO:0015326 "cationic amino acid transmembrane transporter activity" evidence=ISA;IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0016020 "membrane" evidence=IEA

GO:0005773 "vacuole" evidence=IEA

GO:0005774 "vacuolar membrane" evidence=IEA

GO:0071627 "integral to fungal-type vacuolar membrane" evidence=IDA

GO:0034488 "basic amino acid transmembrane export from vacuole" evidence=ISA;IMP

WB|WBGene00021546 laat-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 185 (70.2 bits), Expect = 3.3e-14, P = 3.3e-14
 Identities = 36/89 (40%), Positives = 51/89 (57%)

Query:   176 GQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWES 235
             G  +G + A  Y GGR+PQI  N +  S EGL+  MF   + AN TY +S+++ TT W  
Sbjct:   201 GYIIGSMAAVCYFGGRIPQIIKNYRHSSCEGLSLTMFYIIVAANFTYGISVLLATTSWLY 260

Query:   236 IKANMPWLLDAIVCVLLDLFIILQYIYYR 264
             +  ++PWL  ++ C   D  II QY  YR
Sbjct:   261 LLRHLPWLAGSLGCCCFDAVIISQYYLYR 289

GO:0016021 "integral to membrane" evidence=IEA

GO:0008340 "determination of adult lifespan" evidence=IMP

UNIPROTKB|Q95XZ6 laat-1 "Lysosomal amino acid transporter 1" [Caenorhabditis elegans (taxid:6239)]

 Score = 185 (70.2 bits), Expect = 3.3e-14, P = 3.3e-14
 Identities = 36/89 (40%), Positives = 51/89 (57%)

Query:   176 GQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWES 235
             G  +G + A  Y GGR+PQI  N +  S EGL+  MF   + AN TY +S+++ TT W  
Sbjct:   201 GYIIGSMAAVCYFGGRIPQIIKNYRHSSCEGLSLTMFYIIVAANFTYGISVLLATTSWLY 260

Query:   236 IKANMPWLLDAIVCVLLDLFIILQYIYYR 264
             +  ++PWL  ++ C   D  II QY  YR
Sbjct:   261 LLRHLPWLAGSLGCCCFDAVIISQYYLYR 289

GO:0015809 "arginine transport" evidence=IDA

GO:0015181 "arginine transmembrane transporter activity" evidence=IDA

GO:0015819 "lysine transport" evidence=IDA

GO:0015189 "L-lysine transmembrane transporter activity" evidence=IDA

GO:0031301 "integral to organelle membrane" evidence=IDA

GO:0005765 "lysosomal membrane" evidence=IDA

GO:0080144 "amino acid homeostasis" evidence=IDA

UNIPROTKB|Q2KFS2 MGCH7_ch7g613 "Putative uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 173 (66.0 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
 Identities = 36/91 (39%), Positives = 56/91 (61%)

Query:   173 SAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTE 232
             +AFG  +G++ AA+Y+  RLPQI+ N K  S EGL  L F+ +L  N+TY +S+V  + E
Sbjct:   218 TAFGLTMGYVSAALYLLARLPQIYKNYKEKSCEGLALLFFMLSLTGNLTYGVSLVAYSQE 277

Query:   233 WESIKANMPWLLDAIVCVLLDLFIILQYIYY 263
                I   +PWLL ++  ++ D+ I  Q+  Y
Sbjct:   278 KSYIIKTIPWLLGSLGTIVEDIVIFFQFRLY 308

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|G4MTC4 MGG_04698 "PQ-loop repeat-containing protein 2" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 160 (61.4 bits), Expect = 8.1e-13, Sum P(3) = 8.1e-13
 Identities = 30/57 (52%), Positives = 41/57 (71%)

Query:   170 MEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSI 226
             +E +  GQ  GWL A +Y+G R+PQI LN +R S EG++ L F+FA + N+TYVLSI
Sbjct:   243 LEFNILGQVFGWLCAVLYLGSRVPQILLNYRRKSTEGVSMLFFLFACLGNLTYVLSI 299

GO:0000329 "fungal-type vacuole membrane" evidence=ISS

GO:0003674 "molecular_function" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0008150 "biological_process" evidence=ISS

CGD|CAL0004748 orf19.7370 [Candida albicans (taxid:5476)]

 Score = 178 (67.7 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 35/98 (35%), Positives = 54/98 (55%)

Query:   166 NGNNMEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLS 225
             N   +      Q  GWL A  Y+G R+PQI LN +R S +G++ + F+FA + N+TYV+S
Sbjct:   201 NPEELIFDPLAQIFGWLCAFFYLGSRIPQIVLNYERKSCDGISFMFFLFACLGNLTYVIS 260

Query:   226 IVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYY 263
             I+     W  +  N  WL  ++  + LD  I +Q+  Y
Sbjct:   261 ILSIDMSWNYLWVNSSWLAGSLGTLGLDFTIFIQFFLY 298

GO:0003674 "molecular_function" evidence=ND

GO:0000329 "fungal-type vacuole membrane" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A4G4 CaO19.7370 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 178 (67.7 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 35/98 (35%), Positives = 54/98 (55%)

Query:   166 NGNNMEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLS 225
             N   +      Q  GWL A  Y+G R+PQI LN +R S +G++ + F+FA + N+TYV+S
Sbjct:   201 NPEELIFDPLAQIFGWLCAFFYLGSRIPQIVLNYERKSCDGISFMFFLFACLGNLTYVIS 260

Query:   226 IVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIYY 263
             I+     W  +  N  WL  ++  + LD  I +Q+  Y
Sbjct:   261 ILSIDMSWNYLWVNSSWLAGSLGTLGLDFTIFIQFFLY 298

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	289
pfam04193	61	pfam04193, PQ-loop, PQ loop repeat	1e-15
smart00679	32	smart00679, CTNS, Repeated motif present between t	9e-08

>gnl|CDD|202926 pfam04193, PQ-loop, PQ loop repeat

 Score = 69.5 bits (171), Expect = 1e-15
 Identities = 15/59 (25%), Positives = 30/59 (50%)

Query: 175 FGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEW 233
               LG++   +++   +PQI  N +R S EGL+ L  +  L+ ++ Y+L  ++     
Sbjct: 1   LSNVLGYISLVLWLVSYIPQIIKNYRRKSTEGLSILFLLLWLLGDILYLLYNILNGFPP 59

Members of this family are all membrane bound proteins possessing a pair of repeats each spanning two transmembrane helices connected by a loop. The PQ motif found on loop 2 is critical for the localisation of cystinosin to lysosomes. However, the PQ motif appears not to be a general lysosome-targeting motif. It is thought likely to possess a more general function. Most probably this involves a glutamine residue. Length = 61

>gnl|CDD|128923 smart00679, CTNS, Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

 Score = 47.1 bits (113), Expect = 9e-08
 Identities = 12/32 (37%), Positives = 18/32 (56%)

Query: 189 GGRLPQIWLNIKRGSVEGLNPLMFVFALVANV 220
              LPQI  N +R S EGL+ L  +  L+ ++
Sbjct: 1   VSLLPQIIKNYRRKSTEGLSILFVLLWLLGDI 32

Function unknown, but likely to be associated with the glycosylation machinery. Length = 32

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	289
KOG2913	260	consensus Predicted membrane protein [Function unk	99.78
TIGR00951	220	2A43 Lysosomal Cystine Transporter.	99.55
PF04193	61	PQ-loop: PQ loop repeat	99.46
KOG2913	260	consensus Predicted membrane protein [Function unk	99.46
KOG3145	372	consensus Cystine transporter Cystinosin [Amino ac	99.38
TIGR00951	220	2A43 Lysosomal Cystine Transporter.	99.35
COG4095	89	Uncharacterized conserved protein [Function unknow	98.99
KOG3145	372	consensus Cystine transporter Cystinosin [Amino ac	98.93
smart00679	32	CTNS Repeated motif present between transmembrane	98.9
PF03083	87	MtN3_slv: Sugar efflux transporter for intercellul	98.54
KOG3211	230	consensus Predicted endoplasmic reticulum membrane	98.33
KOG3211	230	consensus Predicted endoplasmic reticulum membrane	96.71
PHA02246	192	hypothetical protein	96.08
KOG1623	243	consensus Multitransmembrane protein [General func	95.8
KOG1623	243	consensus Multitransmembrane protein [General func	94.19

>KOG2913 consensus Predicted membrane protein [Function unknown]

Probab=99.78  E-value=6.5e-20  Score=170.42  Aligned_cols=90  Identities=44%  Similarity=0.774  Sum_probs=84.6

Q ss_pred             cchhHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheecchhhhhhhhhhHHHHHHHH
Q 045038          170 MEHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVC  249 (289)
Q Consensus       170 ~~~~~ig~vLG~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s~~~~~l~~nlP~Li~s~~~  249 (289)
                      .+++..|.++||+++++|.++|+|||++||++|+++|+++.||++++.||.+|..+        +++..|+||+.++..+
T Consensus       160 ~~~~~lg~ilG~l~a~ly~~~rIPQI~~n~~~~s~eGls~~~F~~~~~~n~~y~~s--------~~~~~n~~w~~~~~~~  231 (260)
T KOG2913|consen  160 LEIDSLGAILGSLSALLYLGARIPQIILNHLRKSTEGLSLLAFAFNSLGNTTYILS--------SYLVTNLPWLVDSKGT  231 (260)
T ss_pred             hhhcchHHHHHHHHHHHHcccccchhhhhhccCccchhHHHHHHHHHccccccccc--------cccccCCcccccCCcc
Confidence            56788999999999999999999999999999999999999999999999999887        4456799999999999


Q ss_pred             HHHHHHHHHhhhhcccCC
Q 045038          250 VLLDLFIILQYIYYRYFR  267 (289)
Q Consensus       250 vlLDliIl~Q~~~Y~~~~  267 (289)
                      ..+|++++.|+++|++.+
T Consensus       232 ~~~D~~~~~q~~~~~~~~  249 (260)
T KOG2913|consen  232 IYLDIFIFLQFFNYRASK  249 (260)
T ss_pred             hhHHHHHHHHHHHhhccc
Confidence            999999999999999887

>TIGR00951 2A43 Lysosomal Cystine Transporter

Probab=99.55  E-value=1.5e-14  Score=131.36  Aligned_cols=97  Identities=23%  Similarity=0.240  Sum_probs=79.2

Q ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhhee----cchhhhhhhhh----hHHHH
Q 045038          174 AFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVR----TTEWESIKANM----PWLLD  245 (289)
Q Consensus       174 ~ig~vLG~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~----s~~~~~l~~nl----P~Li~  245 (289)
                      .++.++||+++++|+++++||+++|||+||++|+|+.|++++++|++++.++.+..    ..+.++...+.    .+++.
T Consensus         2 ~iS~~lG~~~~~~~~~~~~PQi~~n~k~ks~~GlS~~~~~l~~~g~~~~~~yn~~~~~~~~~~~~~~~~~~~v~~edl~~   81 (220)
T TIGR00951         2 LLSQILGWGYVAAWSISFYPQIIKNWRRKSAEGLSFDFVMLNLVGFTAYVIFNFLQLYCWSITNEFPLSSPGVTQNDVFF   81 (220)
T ss_pred             chHHHHHHHHHHHHHHHHhhHHHHHHhccccCCcCHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccCCCcHHHHHH
Confidence            46889999999999999999999999999999999999999999999999885432    11111111222    36999


Q ss_pred             HHHHHHHHHHHHHhhhhcccCCCCc
Q 045038          246 AIVCVLLDLFIILQYIYYRYFRKKS  270 (289)
Q Consensus       246 s~~~vlLDliIl~Q~~~Y~~~~~k~  270 (289)
                      ++++++++++++.|+.+|.+..++.
T Consensus        82 ai~~~il~~l~~~q~~~~~~~~~~~  106 (220)
T TIGR00951        82 TLHAILICFIVLHQCGDYERGWQRV  106 (220)
T ss_pred             HHHHHHHHHHHHHHHhhcccccccc
Confidence            9999999999999999887665443

>PF04193 PQ-loop: PQ loop repeat

Probab=99.46  E-value=8.5e-14  Score=101.49  Aligned_cols=58  Identities=26%  Similarity=0.408  Sum_probs=53.6

Q ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheecch
Q 045038          175 FGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTE  232 (289)
Q Consensus       175 ig~vLG~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s~~  232 (289)
                      ++.++|++++++++++++|||++|||+||++|+|+.+++++++|+++++++.+....+
T Consensus         1 i~~~~g~i~~~~~~~~~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~~~~~~~~~   58 (61)
T PF04193_consen    1 ISNILGIISIVLWIISFLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVLYSILSNYP   58 (61)
T ss_pred             CHHHHHHHHHHHHHHHHHhHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            3678999999999999999999999999999999999999999999999988776543

>KOG2913 consensus Predicted membrane protein [Function unknown]

Probab=99.46  E-value=2.7e-13  Score=126.40  Aligned_cols=91  Identities=23%  Similarity=0.377  Sum_probs=80.5

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheecchhhhhhhhhhHHHHHHHHH
Q 045038          171 EHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCV  250 (289)
Q Consensus       171 ~~~~ig~vLG~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s~~~~~l~~nlP~Li~s~~~v  250 (289)
                      ..+.++.++|.++.+||++..+|||++|||+|+++|+|+.|++.|++|+++++++.++..+..       -.++.+...+
T Consensus         4 ~~~~~s~~~g~ls~~~w~v~~iPqi~~n~r~Ks~~glS~lfl~~Wligdi~nl~g~~l~~~~~-------~~~~~~~yy~   76 (260)
T KOG2913|consen    4 INDTLSTILGILSTVCWCVQLIPQIIENYRRKSTEGLSPLFLLTWLIGDIFNLVGFFLQPLGS-------TLKVQAVYYT   76 (260)
T ss_pred             hHHHHHHHHHHHHHHhhhhhhhhHHHHhhhccccCCCCHHHHHHHHHccHHHHHHHHhcccch-------hHHHHHHHHH
Confidence            357889999999999999999999999999999999999999999999999999988865432       1255577788


Q ss_pred             HHHHHHHHhhhhcccCCC
Q 045038          251 LLDLFIILQYIYYRYFRK  268 (289)
Q Consensus       251 lLDliIl~Q~~~Y~~~~~  268 (289)
                      +.|++++.|++||+...+
T Consensus        77 ~~d~~l~~q~~yy~~~~~   94 (260)
T KOG2913|consen   77 LADSVLFVQCLYYGNIYP   94 (260)
T ss_pred             HHHHHHHHHHHhcchhcc
Confidence            999999999999998766

>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]

Probab=99.38  E-value=4.7e-14  Score=133.10  Aligned_cols=102  Identities=22%  Similarity=0.293  Sum_probs=83.8

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhhee--cc----hh--hhhhhh---
Q 045038          171 EHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVR--TT----EW--ESIKAN---  239 (289)
Q Consensus       171 ~~~~ig~vLG~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~--s~----~~--~~l~~n---  239 (289)
                      ...++.+++||++.+.|.+++.||||+||||||+.||+++|+.+++.|...|.+..+..  ..    +.  .+-..-   
T Consensus       119 ~l~il~~IvGwvYf~aWSISfYPqii~N~RrKSv~gLnfDFv~LNl~Gfs~y~ifn~~ly~~~~iq~~y~~~~p~g~~pv  198 (372)
T KOG3145|consen  119 ALVILDQIVGWVYFVAWSISFYPQIILNWRRKSVVGLNFDFVMLNLTGFSAYSIFNFLLYYCPKIQNQYDTSYPLGVPPV  198 (372)
T ss_pred             hHHHHHhhhheeEEEEEeeeechHHHhhhhhcceeccccceeeehhhhhHHHHHHHHHHHhcHHhccceeccCCCCCCcc
Confidence            45688999999999999999999999999999999999999999999999999876542  10    11  110111   


Q ss_pred             -hhHHHHHHHHHHHHHHHHHhhhhcccCCCCcCC
Q 045038          240 -MPWLLDAIVCVLLDLFIILQYIYYRYFRKKSAD  272 (289)
Q Consensus       240 -lP~Li~s~~~vlLDliIl~Q~~~Y~~~~~k~~~  272 (289)
                       .-.+++++|++++.++++.||+.|.|..|+...
T Consensus       199 ~~nDv~fslHa~lmt~Iti~Qc~~yeR~~q~vs~  232 (372)
T KOG3145|consen  199 TLNDVVFSLHAVLMTVITILQCFFYERGWQRVSK  232 (372)
T ss_pred             chhhhhhhHHHHHHHHHHHHHHHhhhhcccccch
Confidence             124889999999999999999999998887654

>TIGR00951 2A43 Lysosomal Cystine Transporter

Probab=99.35  E-value=3.7e-12  Score=115.84  Aligned_cols=84  Identities=18%  Similarity=0.183  Sum_probs=72.7

Q ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheecchhhhhhhhhhHHHHHHHHHHHH
Q 045038          174 AFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLD  253 (289)
Q Consensus       174 ~ig~vLG~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s~~~~~l~~nlP~Li~s~~~vlLD  253 (289)
                      ..-..++.+..++.+++++||+++|||||||+|+|+..++++++|.+-.++..+...       .|...+.....++++|
T Consensus       137 ~~l~~l~~iki~is~ikyiPQi~~Ny~~ksT~glSi~~i~Ld~~G~lqri~ts~~~~-------gd~~~l~~~~~s~~~n  209 (220)
T TIGR00951       137 AFVTMLSYIKVAVTLVKYFPQAATNYHNKSTGQLSIITVFLDFTGLLQRIFQSVNET-------GDPLKAGLFVVSSLFN  209 (220)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCCcCCHHHHHHHHHHHHHHHHHHHHHc-------CCHHHHHHHHHHHHHH
Confidence            344668889999999999999999999999999999999999999888777655322       4556688889999999


Q ss_pred             HHHHHhhhhcc
Q 045038          254 LFIILQYIYYR  264 (289)
Q Consensus       254 liIl~Q~~~Y~  264 (289)
                      ++++.|+++|+
T Consensus       210 ~i~~~Q~~~y~  220 (220)
T TIGR00951       210 GLFAAQVFFYW  220 (220)
T ss_pred             HHHHHHHhhcC
Confidence            99999999986

>COG4095 Uncharacterized conserved protein [Function unknown]

Probab=98.99  E-value=3e-09  Score=84.40  Aligned_cols=84  Identities=20%  Similarity=0.318  Sum_probs=76.7

Q ss_pred             HHHHHHHHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheecchhhhhhhhhhHHHHHHHHHHHHH
Q 045038          175 FGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDL  254 (289)
Q Consensus       175 ig~vLG~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s~~~~~l~~nlP~Li~s~~~vlLDl  254 (289)
                      .-.++||+++.+..++++||.++.+|.|+++++|+.|+....+|-.+|+++        +.+..++|.++++...+++++
T Consensus         4 ~~~viG~ia~ilttf~flPQ~iki~ktK~t~~Isl~~fii~~ia~~lwliy--------gILi~~lPii~aN~i~~il~l   75 (89)
T COG4095           4 FIEVIGTIAGILTTFAFLPQLIKIIKTKNTASISLPMFIILNIALFLWLIY--------GILINDLPIIIANIISFILSL   75 (89)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHHHH--------HHHHccCcchhHHHHHHHHHH
Confidence            456899999999999999999999999999999999999999999999986        555668999999999999999


Q ss_pred             HHHHhhhhcccC
Q 045038          255 FIILQYIYYRYF  266 (289)
Q Consensus       255 iIl~Q~~~Y~~~  266 (289)
                      ++++-...|..+
T Consensus        76 iIl~~kI~~~~k   87 (89)
T COG4095          76 IILFYKIKYILK   87 (89)
T ss_pred             HHHHHHHHHHHh
Confidence            999988877654

>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]

Probab=98.93  E-value=5.7e-10  Score=105.75  Aligned_cols=91  Identities=15%  Similarity=0.290  Sum_probs=78.0

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheec---chhhhhhhhhhHHHHHHHHHHHHH
Q 045038          178 WLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRT---TEWESIKANMPWLLDAIVCVLLDL  254 (289)
Q Consensus       178 vLG~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s---~~~~~l~~nlP~Li~s~~~vlLDl  254 (289)
                      .+.++...+.++.++||.++||+||||+|+|+.-+++++.|+.+.+++.+++.   ++|.-+-.|+-....+.+++++|+
T Consensus       266 ~~syiKl~mTliKYiPQa~mN~tRKSt~gwsIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi~Fdi  345 (372)
T KOG3145|consen  266 NLSYIKLAMTLIKYIPQAYMNFTRKSTVGWSIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSIFFDI  345 (372)
T ss_pred             HHHHHHHHHHHHHhhhHHhhcceeccccccccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHHHHHH
Confidence            35667788889999999999999999999999999999999999999988863   457767778778888899999999


Q ss_pred             HHHHhhhhcccCCC
Q 045038          255 FIILQYIYYRYFRK  268 (289)
Q Consensus       255 iIl~Q~~~Y~~~~~  268 (289)
                      +.++|++.|.++++
T Consensus       346 iFm~QhyVly~~~~  359 (372)
T KOG3145|consen  346 IFMMQHYVLYPRGH  359 (372)
T ss_pred             HHHhhheeEecccc
Confidence            99999985554433

>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

Probab=98.90  E-value=8.6e-10  Score=70.99  Aligned_cols=32  Identities=38%  Similarity=0.531  Sum_probs=29.9

Q ss_pred             hhhhhHHHHHHhcCCcCccCHHHHHHHHHHhH
Q 045038          189 GGRLPQIWLNIKRGSVEGLNPLMFVFALVANV  220 (289)
Q Consensus       189 ~srIPQIi~NyRrKSteGLS~~~~ll~liGni  220 (289)
                      ++++||+++|||+|+++|+|+.|++++++|++
T Consensus         1 ~~~~PQi~~~~~~ks~~glS~~~~~l~~~G~~   32 (32)
T smart00679        1 VSLLPQIIKNYRRKSTEGLSILFVLLWLLGDI   32 (32)
T ss_pred             CcchhHHHHHHHcCCcCcCCHHHHHHHHhcCC
Confidence            46899999999999999999999999999974

Function unknown, but likely to be associated with the glycosylation machinery.

>PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) []

Probab=98.54  E-value=1.1e-07  Score=73.89  Aligned_cols=83  Identities=19%  Similarity=0.275  Sum_probs=69.9

Q ss_pred             HHHHHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheecchhhhhhhhhhHHHHHHHHHHHHHHHH
Q 045038          178 WLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFII  257 (289)
Q Consensus       178 vLG~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s~~~~~l~~nlP~Li~s~~~vlLDliIl  257 (289)
                      ++|.+..++-.++.+||+++.+|+|+++++|+.++++.++++++|+.+-+.        .+|.+.++.++..+++.++.+
T Consensus         5 ~~~~~~~i~~~~spl~~i~~v~k~ks~~~~~~~~~~~~~~~~~~W~~YG~l--------~~d~~i~~~N~~g~~~~~~~~   76 (87)
T PF03083_consen    5 ILASVSSIIMFLSPLPQIRQVIKTKSTGSVSFPPFLAMFFNCVLWLIYGIL--------INDWPIIVPNVFGLVLSIIYL   76 (87)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCCCccceehhHHHhhhccHhhhhhhh--------cCCeeEEeeHHHHHHHHHHHH
Confidence            356666677778889999999999999999999999999999999987444        345566888888999999999


Q ss_pred             HhhhhcccCCC
Q 045038          258 LQYIYYRYFRK  268 (289)
Q Consensus       258 ~Q~~~Y~~~~~  268 (289)
                      +-+++|.++++
T Consensus        77 ~~~~~y~~~~~   87 (87)
T PF03083_consen   77 VVYYIYPSKKK   87 (87)
T ss_pred             hheEEeCCCCC
Confidence            99998887643

Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This signature maps to transmembrane helices which are found in two copies in most members of the family.; GO: 0016021 integral to membrane

>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only]

Probab=98.33  E-value=1.5e-06  Score=79.12  Aligned_cols=80  Identities=20%  Similarity=0.214  Sum_probs=65.1

Q ss_pred             HHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheecchhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q 045038          183 MAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVLLDLFIILQYIY  262 (289)
Q Consensus       183 s~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s~~~~~l~~nlP~Li~s~~~vlLDliIl~Q~~~  262 (289)
                      ...+...+|++||+.|||+|+++.+|....++.+.|...++++.+-...|       +-.++......++|.+|.+|++.
T Consensus       149 ~l~i~v~sr~~Qi~~n~~~~~tgqls~it~fLsf~g~lARiftsiq~t~d-------~~mll~~v~s~~~Ng~i~aq~l~  221 (230)
T KOG3211|consen  149 CLPIVVVSRLLQIQCNYHNRSTGQLSLITVFLSFGGCLARIFTSIQETGD-------FLMLLRFVISLALNGLITAQVLR  221 (230)
T ss_pred             CchhhhHHHHHHHHHHhcccccchhHHHHHHHHhhhHHHHHHHHHHhcCC-------hhhHHHHHHHHHHhHHHHHHHHH
Confidence            33456678999999999999999999999999999999998876643322       22366667789999999999999


Q ss_pred             cccCCCC
Q 045038          263 YRYFRKK  269 (289)
Q Consensus       263 Y~~~~~k  269 (289)
                      ||+...+
T Consensus       222 Y~s~~~~  228 (230)
T KOG3211|consen  222 YWSTAIK  228 (230)
T ss_pred             HHhcCCC
Confidence            9976443

>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only]

Probab=96.71  E-value=0.0092  Score=54.75  Aligned_cols=87  Identities=20%  Similarity=0.213  Sum_probs=66.6

Q ss_pred             chhHHHHHHHHHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheecchhhhhhhhhhHHHHHHHHH
Q 045038          171 EHSAFGQWLGWLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCV  250 (289)
Q Consensus       171 ~~~~ig~vLG~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s~~~~~l~~nlP~Li~s~~~v  250 (289)
                      -.-.++..+||.-..-.+.-++|||.+.-..||++|||..-+.+-++|....+.+.+..+-++.-. ...|      +-+
T Consensus        26 l~~llsklLg~~~va~sl~vKlPQI~kI~aakSa~GLSv~s~~LElvgytvtl~Y~~~~g~pFss~-gE~~------fLl   98 (230)
T KOG3211|consen   26 LKALLSKLLGLSTVAGSLLVKLPQIMKIRAAKSARGLSVVSLLLELVGYTVTLSYSYTSGYPFSSY-GEYP------FLL   98 (230)
T ss_pred             hHHHHHhhhhHHHHHHHHHhhhhHHHHHHhhcccccccHHHHHHHHHHHHheeeehhhcCCCchhH-HHHH------HHH
Confidence            356788999999999999999999999999999999999999999999988777666544322111 1122      234


Q ss_pred             HHHHHHHHhhhhcc
Q 045038          251 LLDLFIILQYIYYR  264 (289)
Q Consensus       251 lLDliIl~Q~~~Y~  264 (289)
                      +-+.+++.++++|+
T Consensus        99 ~Q~vili~~if~f~  112 (230)
T KOG3211|consen   99 LQAVILILCIFHFS  112 (230)
T ss_pred             HHHHHHHHHHHHhc
Confidence            55677777777777

>PHA02246 hypothetical protein

Probab=96.08  E-value=0.035  Score=49.15  Aligned_cols=50  Identities=20%  Similarity=0.225  Sum_probs=41.2

Q ss_pred             HHHHHHHHhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheec
Q 045038          181 WLMAAIYMGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRT  230 (289)
Q Consensus       181 ~is~vl~~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s  230 (289)
                      .++..--..+.+|||+.=||.|+.||.++++.++.-.|-.+-.++..+..
T Consensus       114 tVat~tIiLaYi~QIIqfyKTK~SEg~n~~l~lii~~GL~~L~~~m~Lth  163 (192)
T PHA02246        114 TVATITIILAYVTQITTFYKTKSAEGTNRFLFLIIGLGLASLIVSMVLTH  163 (192)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcccCCCChhHHHHHHHHHHHHHHHHhhhC
Confidence            34444456689999999999999999999999999999988777666543

>KOG1623 consensus Multitransmembrane protein [General function prediction only]

Probab=95.80  E-value=0.0077  Score=56.26  Aligned_cols=87  Identities=18%  Similarity=0.280  Sum_probs=64.1

Q ss_pred             HHHHHHHHHHHHH---HhhhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheecchhhhhhhhhhHHHHHHHHHH
Q 045038          175 FGQWLGWLMAAIY---MGGRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPWLLDAIVCVL  251 (289)
Q Consensus       175 ig~vLG~is~vl~---~~srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s~~~~~l~~nlP~Li~s~~~vl  251 (289)
                      +..++|..+.+++   +.+.+|=.++.+||||+||.|..=+++.+++..+|+-+-+....|+       ..+.-+++.++
T Consensus         5 ~~~l~~i~~~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~d~-------llitIN~~G~~   77 (243)
T KOG1623|consen    5 LLFLFGILGNIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVHDY-------LLITINGIGLV   77 (243)
T ss_pred             HHHHHHHHHHHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccCce-------EEEEEehhcHH
Confidence            3445555555444   4678899999999999999999999999999999988754433221       12444666777


Q ss_pred             HHHHHHHhhhhcccCCC
Q 045038          252 LDLFIILQYIYYRYFRK  268 (289)
Q Consensus       252 LDliIl~Q~~~Y~~~~~  268 (289)
                      +..+-+.-|++|-.+++
T Consensus        78 ie~~Yi~~f~~ya~~k~   94 (243)
T KOG1623|consen   78 IETVYISIFLYYAPKKK   94 (243)
T ss_pred             HHHHHHHHHheecCchh
Confidence            78888888888876655

>KOG1623 consensus Multitransmembrane protein [General function prediction only]

Probab=94.19  E-value=0.049  Score=50.96  Aligned_cols=86  Identities=20%  Similarity=0.184  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHHHHHh---hhhhHHHHHHhcCCcCccCHHHHHHHHHHhHHHhhhhheecchhhhhhhhhhH-HHHHHHH
Q 045038          174 AFGQWLGWLMAAIYMG---GRLPQIWLNIKRGSVEGLNPLMFVFALVANVTYVLSIVVRTTEWESIKANMPW-LLDAIVC  249 (289)
Q Consensus       174 ~ig~vLG~is~vl~~~---srIPQIi~NyRrKSteGLS~~~~ll~liGni~y~isi~l~s~~~~~l~~nlP~-Li~s~~~  249 (289)
                      ...+.+|++++++..+   +.+=-+.+-.|+||+|.++..+.+..++-...|.++-++.+         .++ .+-+++.
T Consensus       123 ~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls~a~fl~a~~W~lYGlli~---------D~~IaipN~iG  193 (243)
T KOG1623|consen  123 RRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEYMPFPLSFALFLVAVQWLLYGLLIK---------DFFIAIPNVLG  193 (243)
T ss_pred             eeeeeeehhhhhhhHHhhhccHHhhhhheecCceeeechHHHHHHHHHHHHHHHHHHHhc---------CeEEEcccHHH
Confidence            3445677777665544   67777889999999999999998888888888877644331         112 2344556


Q ss_pred             HHHHHHHHHhhhhcccCCC
Q 045038          250 VLLDLFIILQYIYYRYFRK  268 (289)
Q Consensus       250 vlLDliIl~Q~~~Y~~~~~  268 (289)
                      +++.++-++-|+.|.+.+.
T Consensus       194 ~~l~~~QL~Ly~~y~~~~~  212 (243)
T KOG1623|consen  194 FLLGLIQLILYFKYPKTTE  212 (243)
T ss_pred             HHHHHHHHHHhhhcCCCcc
Confidence            6777766666665555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00