Citrus Sinensis ID: 045042

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-
Protein Sequence
MDGYRYGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLPQIPPRMPRQSHDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHGC
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcEEEEEEEcHHHHHHHcccEEEEcccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccEEEEEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHEEEEEEEccEHHHHHHHHHHHHHcccEEEccc
Coil and Loop (DISEMBL)
mdgyrygsgqrpyggdrrLEIVSVSgksftsaavggnqiyathdlpqipprmprqshdaslkpwgftdpemkRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKcsqivhgc
Flexible Loop (DISEMBL)
mdgyrygsgqrpyggdrRLEIVSVSGKSFTSAAVGGNQIYATHdlpqipprmprqshdaslkpwgftdpemkrrkriakykvytvegkvkaslrkglrwiknkcsqivhgc
Low Complexity Region (SEG)
MDGYRYGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLPQIPPRMPRQSHDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHGC
Disordered region (IsUnstruct)
********************IVSV****FTSAAVGGNQIYAT********************************KRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIV***
Disordered Region (DISOPRED)
************************************************************************RRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHGC
Disordered Region (DISEMBL)
*********QRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLPQIPPRMPRQSHDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHGC
Disordered Region (DISPRO)
*********QRPYGGDRRLEIVSVSGK************************************WGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHGC
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDGYRYGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLPQIPPRMPRQSHDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHGC
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
255548521	113	conserved hypothetical protein [Ricinus	0.936	0.920	0.635	7e-28
224131034	106	predicted protein [Populus trichocarpa]	0.927	0.971	0.651	3e-27
356572773	90	PREDICTED: uncharacterized protein LOC10	0.774	0.955	0.571	9e-22
15226612	110	uncharacterized protein [Arabidopsis tha	0.882	0.890	0.561	2e-21
357442357	106	hypothetical protein MTR_1g087730 [Medic	0.918	0.962	0.504	2e-20
357511319	91	hypothetical protein MTR_7g109290 [Medic	0.810	0.989	0.5	8e-19
297828475	110	hypothetical protein ARALYDRAFT_904223 [	0.846	0.854	0.504	4e-18
255648101	93	unknown [Glycine max]	0.792	0.946	0.5	7e-17
296083284	108	unnamed protein product [Vitis vinifera]	0.558	0.574	0.608	6e-15
413955979	190	hypothetical protein ZEAMMB73_822579 [Ze	0.558	0.326	0.564	6e-14

>gi|255548521|ref|XP_002515317.1| conserved hypothetical protein [Ricinus communis] gi|223545797|gb|EEF47301.1| conserved hypothetical protein [Ricinus communis]

 Score =  127 bits (320), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 75/118 (63%), Positives = 83/118 (70%), Gaps = 14/118 (11%)

Query: 1   MDGYRYGSGQRPYG-GDRRLEIVSVSGKSFTSAAVGGNQIYATH----DLPQIPPRM--P 53
           MDGY Y SGQR YG GD+R EIVS  GKSF ++    NQIYAT     + P IP     P
Sbjct: 1   MDGYGYSSGQRSYGVGDQRFEIVS--GKSFCNS----NQIYATRGHSPNQPPIPTHATRP 54

Query: 54  RQSHDASLKPWG-FTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110
           R+S   +  PWG F DPEMKR+KRIAKYKVYTVEGKVK SLR GL WIKNKCSQI+ G
Sbjct: 55  RKSASTATAPWGGFGDPEMKRKKRIAKYKVYTVEGKVKTSLRNGLHWIKNKCSQIIRG 112

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224131034|ref|XP_002320985.1| predicted protein [Populus trichocarpa] gi|222861758|gb|EEE99300.1| predicted protein [Populus trichocarpa]

 Score =  125 bits (314), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/112 (65%), Positives = 84/112 (75%), Gaps = 9/112 (8%)

Query: 1   MDGYRYGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATH-DLPQIPPRMPRQSHDA 59
           MDGY YGSGQR   GDRRLEIVS  G  F ++    NQI+AT    P +    PR+S  +
Sbjct: 1   MDGYGYGSGQR---GDRRLEIVSGKGFGFGNS----NQIFATRPHSPNVASIPPRRSLSS 53

Query: 60  SLKPWG-FTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110
           S KPWG  TDPEMKR+KRIAKYKVYTVEGKVKASLR+G+ WIKNKCS+I+HG
Sbjct: 54  SSKPWGGLTDPEMKRKKRIAKYKVYTVEGKVKASLRRGICWIKNKCSKIIHG 105

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356572773|ref|XP_003554540.1| PREDICTED: uncharacterized protein LOC100807345 [Glycine max]

 Score =  107 bits (267), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 60/105 (57%), Positives = 67/105 (63%), Gaps = 19/105 (18%)

Query: 6   YGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLPQIPPRMPRQSHDASLKPWG 65
           YGSG RPYGG RR+E+VS     ++S               Q P      S  AS KPW 
Sbjct: 4   YGSGHRPYGGGRRMEVVSGKSHGWSST--------------QSP-----DSTQASEKPWR 44

Query: 66  FTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110
           F DPE KR+KRIAKYKVY VEGKVKA+L+KGLRWIK KCSQI HG
Sbjct: 45  FGDPEAKRKKRIAKYKVYGVEGKVKATLKKGLRWIKKKCSQIAHG 89

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15226612|ref|NP_182270.1| uncharacterized protein [Arabidopsis thaliana] gi|2529679|gb|AAC62862.1| hypothetical protein [Arabidopsis thaliana] gi|23092557|gb|AAN08435.1| hypothetical protein [Arabidopsis thaliana] gi|50058797|gb|AAT69143.1| hypothetical protein At2g47480 [Arabidopsis thaliana] gi|62321768|dbj|BAD95393.1| hypothetical protein [Arabidopsis thaliana] gi|110741322|dbj|BAF02211.1| hypothetical protein [Arabidopsis thaliana] gi|330255754|gb|AEC10848.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  106 bits (264), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/114 (56%), Positives = 73/114 (64%), Gaps = 16/114 (14%)

Query: 2   DGYRYGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLPQIPPRMP------RQ 55
           DG  YGSGQR YG DRR EIVS  GK         NQIY T D P   P  P      R 
Sbjct: 5   DGCGYGSGQRTYGVDRRKEIVS--GKR--------NQIYGTRDYPPSLPPPPGKVAAGRS 54

Query: 56  SHDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVH 109
           +  +SL+  G +D EMKR+KRIA+YK YTVEGKVK++L+ G RWIKNKC QIVH
Sbjct: 55  NASSSLRIGGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVH 108

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357442357|ref|XP_003591456.1| hypothetical protein MTR_1g087730 [Medicago truncatula] gi|355480504|gb|AES61707.1| hypothetical protein MTR_1g087730 [Medicago truncatula]

 Score =  103 bits (256), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/113 (50%), Positives = 72/113 (63%), Gaps = 11/113 (9%)

Query: 1   MDGYRYGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLPQIPPRMPRQSHDAS 60
           M+GY YGS    +G +RR+EIVS  G+S+     G +Q Y      +    + R SHD +
Sbjct: 1   MEGYGYGSDHGSFGSERRIEIVS--GRSY-----GFSQSYYV-GRSESTGEVTRASHDGA 52

Query: 61  L---KPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110
               KPW F D   KRRKRIA+YKVY VEGKVKA+ R G+RWIK+ CS+IVHG
Sbjct: 53  APVAKPWSFNDAATKRRKRIARYKVYAVEGKVKATFRNGIRWIKHTCSRIVHG 105

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357511319|ref|XP_003625948.1| hypothetical protein MTR_7g109290 [Medicago truncatula] gi|355500963|gb|AES82166.1| hypothetical protein MTR_7g109290 [Medicago truncatula]

 Score = 97.4 bits (241), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 55/110 (50%), Positives = 69/110 (62%), Gaps = 20/110 (18%)

Query: 1   MDGYRYGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLPQIPPRMPRQSHDAS 60
           M+GYR  SG   Y G+RR+++V +SGK + S+                       S   +
Sbjct: 1   MEGYR--SGHPSYDGNRRVDVV-MSGKGYGSSGT-----------------RSANSTQGN 40

Query: 61  LKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110
            KPW F DPE KR+KRIAKYKV++VEGKVKA+L+KGLRWIK KCSQI HG
Sbjct: 41  EKPWRFNDPEAKRKKRIAKYKVHSVEGKVKATLKKGLRWIKKKCSQITHG 90

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297828475|ref|XP_002882120.1| hypothetical protein ARALYDRAFT_904223 [Arabidopsis lyrata subsp. lyrata] gi|297327959|gb|EFH58379.1| hypothetical protein ARALYDRAFT_904223 [Arabidopsis lyrata subsp. lyrata]

 Score = 95.1 bits (235), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/115 (50%), Positives = 67/115 (58%), Gaps = 21/115 (18%)

Query: 2   DGYRYGSGQRPYGG-DRRLEIVSVSGKSFTSAAVGGNQIYATHDLP---------QIPPR 51
           DG  YGS QR YG  DR  EIVS  GKS        NQIY T D P         ++  R
Sbjct: 5   DGCGYGSDQRTYGTRDRSTEIVS--GKS--------NQIYGTQDYPPSLPPPPPGEVAAR 54

Query: 52  MPRQSHDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQ 106
               S    L  WG +D EMKR+KRIA+YK YTVEGKVK++++ G RWIKNKCS 
Sbjct: 55  KSNASSTTKL-SWGLSDAEMKRKKRIARYKAYTVEGKVKSTVKNGFRWIKNKCSH 108

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255648101|gb|ACU24505.1| unknown [Glycine max]

 Score = 91.3 bits (225), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 67/108 (62%), Gaps = 20/108 (18%)

Query: 3   GYRYGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLPQIPPRMPRQSHDASLK 62
           G  +GSG RP+GG R++E+VS           G +  +++   P         S  AS  
Sbjct: 5   GSGHGSGHRPHGGGRKMEVVS-----------GKSHGWSSTKSPD--------STQASEM 45

Query: 63  PWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110
           PW F DPE KR+KRIAKYKVY VEG+VKA+L+KGLRWIK KC QI HG
Sbjct: 46  PWRFGDPEAKRKKRIAKYKVYGVEGRVKATLKKGLRWIKKKCFQI-HG 92

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296083284|emb|CBI22920.3| unnamed protein product [Vitis vinifera]

 Score = 84.7 bits (208), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/69 (60%), Positives = 50/69 (72%), Gaps = 7/69 (10%)

Query: 49  PPRMPRQS-------HDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIK 101
           PPR  + S        D+S   WGF+DPE+KRRKRIA YK Y VEGK+KASLR G RW+K
Sbjct: 39  PPRSGKTSVSKNYYYEDSSSSSWGFSDPEIKRRKRIALYKAYGVEGKMKASLRGGFRWVK 98

Query: 102 NKCSQIVHG 110
           NKCSQ++HG
Sbjct: 99  NKCSQLIHG 107

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|413955979|gb|AFW88628.1| hypothetical protein ZEAMMB73_822579 [Zea mays]

 Score = 81.3 bits (199), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 35/62 (56%), Positives = 43/62 (69%)

Query: 49  PPRMPRQSHDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIV 108
           PP   R         W F+DPEMKRR+R+A YK Y+ EGKVKAS R+G RWIK KCS+++
Sbjct: 51  PPVSNRGGGGGVGSAWCFSDPEMKRRRRVASYKAYSAEGKVKASFRRGFRWIKAKCSELI 110

Query: 109 HG 110
           HG
Sbjct: 111 HG 112

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	111
TAIR|locus:2062018	110	AT2G47480 "AT2G47480" [Arabido	0.882	0.890	0.561	2.6e-24
TAIR|locus:2081630	110	AT3G62640 "AT3G62640" [Arabido	0.927	0.936	0.418	1.1e-16
TAIR|locus:2047700	116	AT2G19460 "AT2G19460" [Arabido	0.945	0.905	0.366	2e-15
TAIR|locus:1006230186	124	AT3G05725 "AT3G05725" [Arabido	0.576	0.516	0.507	1.8e-14
TAIR|locus:2143059	105	AT5G11970 "AT5G11970" [Arabido	0.846	0.895	0.403	1e-13
TAIR|locus:2088227	102	AT3G13910 "AT3G13910" [Arabido	0.792	0.862	0.376	1.2e-10
TAIR|locus:2030295	127	AT1G72720 "AT1G72720" [Arabido	0.414	0.362	0.478	5.9e-09
TAIR|locus:2140598	87	AT4G09890 "AT4G09890" [Arabido	0.351	0.448	0.538	4.2e-08

TAIR|locus:2062018 AT2G47480 "AT2G47480" [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 64/114 (56%), Positives = 74/114 (64%)

Query:     2 DGYRYGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLP-QIPP-----RMPRQ 55
             DG  YGSGQR YG DRR EIVS  GK         NQIY T D P  +PP        R 
Sbjct:     5 DGCGYGSGQRTYGVDRRKEIVS--GKR--------NQIYGTRDYPPSLPPPPGKVAAGRS 54

Query:    56 SHDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVH 109
             +  +SL+  G +D EMKR+KRIA+YK YTVEGKVK++L+ G RWIKNKC QIVH
Sbjct:    55 NASSSLRIGGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVH 108

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2081630 AT3G62640 "AT3G62640" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 49/117 (41%), Positives = 68/117 (58%)

Query:     1 MDGYRYGSGQRPYGGDRRLEIVSVSGKSFTSAAVGGN-QIYATH-DLPQIPPRMPRQSHD 58
             MDG+  GS  R    D+ ++IV+  GK +    VGG  Q+Y+T  D P+  P +P     
Sbjct:     1 MDGF--GSHPRTLAVDQWMDIVN--GKGY---GVGGTTQVYSTRPDSPKFQPSIPPPPGS 53

Query:    59 AS-----LKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110
              S       PW   D E KR+KRIA YK Y +EGKVK++++KG  WIK++ S I+HG
Sbjct:    54 TSKTRTTATPWRLIDAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2047700 AT2G19460 "AT2G19460" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 44/120 (36%), Positives = 70/120 (58%)

Query:     1 MDGYR---YGSGQ----RPYGGDRRLEIVSVSGKSFTSAAVGGNQIYATH--DLP-QIPP 50
             M+ YR   YG G+    + Y   RR    S    SF+   +   + Y+T   D P +IP 
Sbjct:     1 MEDYRSRSYGDGRTSDLQQYSAHRR----SDGPDSFSGNGMQDLRSYSTSYTDYPTRIPE 56

Query:    51 -RMPRQSHDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVH 109
              + P++   +S   WGF DP+++R+KR+  Y+ YTVEGK+K S RK  +WIK+KC+++++
Sbjct:    57 DQNPKKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:1006230186 AT3G05725 "AT3G05725" [Arabidopsis thaliana (taxid:3702)]

 Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 34/67 (50%), Positives = 48/67 (71%)

Query:    44 DLPQIPPRMPRQSHDASLKPWGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNK 103
             D+P  P R    SH    K W + DPE+KR++R+AKYK+Y+ EGK+K +LRK  +WIK +
Sbjct:    60 DMPVRPRRS--SSHSTLFKGW-WNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQ 116

Query:   104 CSQIVHG 110
             CS+I+HG
Sbjct:   117 CSKIIHG 123

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2143059 AT5G11970 "AT5G11970" [Arabidopsis thaliana (taxid:3702)]

 Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 42/104 (40%), Positives = 59/104 (56%)

Query:    10 QRPYGGDRRLEIVSVSGKS---FTSAAVGGNQIYATHDLPQIPPRMPRQSHDASLKPWGF 66
             QRPYG D  ++I    G     F S +      Y T +   I   + ++   A  K WG 
Sbjct:     7 QRPYG-DGGMQIQPYHGNQGGDFRSYSAS----YGTRE-NNIYD-VKKEKSIARSKSWGI 59

Query:    67 TDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110
             TDPE++R+KR+A YK+Y VEGKVK S R   RW+K + +Q+V+G
Sbjct:    60 TDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVVYG 103

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2088227 AT3G13910 "AT3G13910" [Arabidopsis thaliana (taxid:3702)]

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 35/93 (37%), Positives = 55/93 (59%)

Query:    12 PYGGDRRLEIVSVSGKSFTSAAVGGNQIYATHDLP-QIPPRMPRQSHD-ASLKPWGFTDP 69
             P  G+RR  +   +  SF  +A  G+Q   T+D   +I       + D A+ + W F+DP
Sbjct:     8 PASGNRRDAVKGYNSGSFDDSA--GDQSQ-TNDYQLKIKKSKSVPNADRAASRSWSFSDP 64

Query:    70 EMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKN 102
             E +R++R+A YKVY+VE K+K S+RK  +W K+
Sbjct:    65 ESRRKRRVAGYKVYSVEQKMKGSIRKSFKWFKD 97

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2030295 AT1G72720 "AT1G72720" [Arabidopsis thaliana (taxid:3702)]

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 22/46 (47%), Positives = 32/46 (69%)

Query:    65 GFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110
             G  + E++R+KR+A Y VY VEG+VK S++K  +W K  CS  V+G
Sbjct:    80 GLCEAEIQRKKRVASYNVYGVEGRVKGSMKKSFKWFKETCSNAVYG 125

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2140598 AT4G09890 "AT4G09890" [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 21/39 (53%), Positives = 30/39 (76%)

Query:    67 TDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCS 105
             TDPEMKR+KR+A Y ++  E K+K++L+   +WIKNK S
Sbjct:    39 TDPEMKRKKRVASYNLFATEEKLKSTLKNSFKWIKNKFS 77


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.136   0.425    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      111       111   0.00091  102 3  11 22  0.47    30
                                                     29  0.42    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  587 (62 KB)
  Total size of DFA:  129 KB (2081 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.25u 0.18s 13.43t   Elapsed:  00:00:00
  Total cpu time:  13.26u 0.18s 13.44t   Elapsed:  00:00:00
  Start:  Fri May 10 23:04:28 2013   End:  Fri May 10 23:04:28 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	111
pfam12023	47	pfam12023, DUF3511, Domain of unknown function (DU	1e-24

>gnl|CDD|204810 pfam12023, DUF3511, Domain of unknown function (DUF3511)

 Score = 87.8 bits (218), Expect = 1e-24
 Identities = 35/47 (74%), Positives = 40/47 (85%)

Query: 64  WGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG 110
           WG +DPEMKRR+R+A YK Y VEGKVKASLRK  +WIK+KCS IVHG
Sbjct: 1   WGLSDPEMKRRRRVAAYKAYAVEGKVKASLRKSFKWIKDKCSHIVHG 47

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 50 amino acids in length. This domain has two completely conserved residues (Y and K) that may be functionally important. Length = 47

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	111
PF12023	47	DUF3511: Domain of unknown function (DUF3511); Int	99.97

>PF12023 DUF3511: Domain of unknown function (DUF3511); InterPro: IPR021899 This presumed domain is functionally uncharacterised

Probab=99.97  E-value=3.7e-33  Score=178.33  Aligned_cols=47  Identities=79%  Similarity=1.387  Sum_probs=46.5

Q ss_pred             CCCCCHHHHhhhhhheeeeeeeechhhhhhhccchhhcccccccccc
Q 045042           64 WGFTDPEMKRRKRIAKYKVYTVEGKVKASLRKGLRWIKNKCSQIVHG  110 (111)
Q Consensus        64 W~~~DpE~kRkkRVA~YK~YavEGKvK~S~R~sfrWiK~k~s~iv~g  110 (111)
                      |+|+|||||||||||+||+|+||||||+|||+||||||+||++||||
T Consensus         1 w~~~dpE~kRkkRVA~Yk~y~vEGKvK~S~R~sfrWiK~k~s~iv~G   47 (47)
T PF12023_consen    1 WGFNDPEMKRKKRVASYKVYAVEGKVKGSLRKSFRWIKNKCSRIVYG   47 (47)
T ss_pred             CCCCCHHHHHHHHHHhhheeeeehHHHHHHHhhhHHHHHHhhHhhcC
Confidence            89999999999999999999999999999999999999999999998

This domain is found in eukaryotes. This domain is about 50 amino acids in length. This domain has two completely conserved residues (Y and K) that may be functionally important.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00