Citrus Sinensis ID: 045079

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590------
MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLETNPHPPADDNLNSDGDSPDSSDFSNAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSLNHVLPSLGQNIDTPDVHYTSSSSGSSSSDHSFSTSNCLLDSPESNLLVPNLHGEIESLLKREGVNFAPKVSLPKHGEGVLLSSADDGRHHSSYGSRGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDESEPYSSYRESENGSSRKLQQNGQSKGSTGGTTRGRKRGDKRKEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccccccccccccHHHHHHHHHccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHccccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccEEEEEEccccccccccccccccHHHHHHHHHHHHcccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccc
cccHHccccccccccEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcHHcccccccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccHHHccccccccccEEEEccccccccccccccccccccccccHHHHHccccccccEEEccccHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccccccccccccccEEEcccccccEcHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHccccHHHHHHcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHcccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccEEEHHHHccHccccHHHcccccccEEEEEHHHHHccccccccccccHHHHHHHHHHHccccEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccc
mdaifegfpgsmdgfkfpasscsnqnLANAFklkhnstnhhppfletnphppaddnlnsdgdspdssdfSNAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDvlgqkyppslnhvlpslgqnidtpdvhytssssgssssdhsfstsnclldspesnllvpnlHGEIESLLkregvnfapkvslpkhgegvllssaddgrhhssygsrgrkndqredsdyleqgRRSKLSAVSLAVSDVKLERFDEVLLRHCEtkkdesepyssyresengssrklqqngqskgstggttrgrkrgdkrkEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRhssafgdgTQRLAHYFADALEARLlgahtpmhthisCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFgicygfqwpcliqilssrptgppmlritgielpqpgfrpaervEETGNRLKSYCerfnvpfeYNVIAQKWETIRLedfkidrdevTVVNCVHrmknlpddtvvdssprDAVLDLIKrinpdvfihgisngtynaPFFLARFREALFHFSAMfdifdatvpredAERMLFEREI
MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLETNPHPPADDNLNSDGDSPDSSDFSNAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSLNHVLPSLGQNIDTPDVHYTSSSSGSSSSDHSFSTSNCLLDSPESNLLVPNLHGEIESLLKREGVNFAPKVSLPKHGEGVLlssaddgrhhssygsrgrkndqreDSDYleqgrrsklsavslavsdvklerfdeVLLRHcetkkdesepyssyresengssrklqqngqskgstggttrgrkrgdkrkevVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGielpqpgfrpAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRledfkidrDEVTVVNCVHrmknlpddtvvdssPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI
MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLETNPHPPAddnlnsdgdspdssdfsnAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSLNHVLPSLGQNIDTPDVHYTssssgssssdhsfstsNCLLDSPESNLLVPNLHGEIESLLKREGVNFAPKVSLPKHGEGVLLSSADDGRHHSSYGSRGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDesepyssyreseNGSSRKLQQNGQskgstggttrgrkrgdkrkEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI
**********************************************************************NAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSLNHVLP*****************************************LVPNLHGEIESLLK***VN********************************************************LAVSDVKLERFDEVLLRHC**************************************************VDLRGLLTLCAQAV*********************FGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPT**PMLRITGIEL**************GNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATV**************
*******FPGSMDGFKFPASSCSNQNLANAFKLKHNSTN******************************SNAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSF*********************************************************************************************************************************************ERFDEVLLRHCET*************************************************DLRGLLTLCAQAVASNDQRTANEQLKQIRRHS*****GTQRLAHYFADALEARLLGAHTPM********SAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFERE*
MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLETNPHPPADDNLN*********DFSNAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSLNHVLPSLGQNIDTPD*********************CLLDSPESNLLVPNLHGEIESLLKREGVNFAPKVSLPKHGEGVLLSSADD***************************RSKLSAVSLAVSDVKLERFDEVLLRHCET*********************************************KEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI
*****EGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFL*********************SDFSNAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPP************************************SNCLLDSPESNLLVPNLHGEIESLLKREGVNFAPKVSLPKHGEGVLLSSA********************DSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKK*****YS****************************GRKRGDKRKEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLF*REI
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLETNPHPPADDNLNSDGDSPDSSDFSNAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYPPSLNHVLPSLGQNIDTPDVHYTSSSSGSSSSDHSFSTSNCLLDSPESNLLVPNLHGEIESLLKREGVNFAPKVSLPKHGEGVLLSSADDGRHHSSYGSRGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDESEPYSSYRESENGSSRKLQQNGQSKGSTGGTTRGRKRGDKRKEVVDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query596 2.2.26 [Sep-21-2011]
P0C883694 Scarecrow-like protein 33 yes no 0.929 0.798 0.410 1e-120
O80933718 Scarecrow-like protein 9 no no 0.869 0.721 0.435 1e-116
Q9LTI5610 Scarecrow-like protein 11 no no 0.850 0.831 0.428 1e-116
Q9XE58769 Scarecrow-like protein 14 no no 0.634 0.491 0.519 1e-108
Q9SNB8583 Scarecrow-like protein 30 no no 0.583 0.596 0.537 1e-105
P0C884630 Scarecrow-like protein 34 no no 0.825 0.780 0.430 1e-102
Q3EDH0695 Scarecrow-like protein 31 no no 0.911 0.781 0.393 1e-95
Q9FUZ7668 Protein SCARECROW OS=Zea N/A no 0.446 0.398 0.341 4e-39
Q9AVK4819 Protein SCARECROW OS=Pisu N/A no 0.441 0.321 0.336 5e-39
Q9LDL7490 Scarecrow-like transcript no no 0.478 0.581 0.313 8e-39
>sp|P0C883|SCL33_ARATH Scarecrow-like protein 33 OS=Arabidopsis thaliana GN=SCL33 PE=3 SV=1 Back     alignment and function desciption
 Score =  431 bits (1108), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 266/648 (41%), Positives = 371/648 (57%), Gaps = 94/648 (14%)

Query: 1   MDAIFEGFPGSMDGFKFPASSCSNQNLANAFKLKHNSTNHHPPFLETNPHPPADDNLNSD 60
           M +   GFPGS+D F FP              L + S  +  P L+    PP  D     
Sbjct: 1   MGSYSAGFPGSLDWFDFPG-------------LGNGSYLNDQPLLDIGSVPPPLDPYPQQ 47

Query: 61  GDSPDSSDFSNAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKYP----- 115
             +   +DFS++VLKYIS++LMEED+E K CM  D L+LQAAEKS Y+ LG+KYP     
Sbjct: 48  NLASADADFSDSVLKYISQVLMEEDMEDKPCMFHDALSLQAAEKSLYEALGEKYPVDDSD 107

Query: 116 ------PSLNHVLPSLGQN----------------------------IDTP---DVHYTS 138
                  SL  ++ S G +                            + TP   +  + S
Sbjct: 108 QPLTTTTSLAQLVSSPGGSSYASSTTTTSSDSQWSFDCLENNRPSSWLQTPIPSNFIFQS 167

Query: 139 SSSGSSSSDHSFSTSNCLLDSPESNLLVPNLHGEIESLLK-REGVNFAPKVSLPKHGEGV 197
           +S+ +SS +  F +S        S  LV N+  + +  L+ ++G+  A K  LPK  + V
Sbjct: 168 TSTRASSGNAVFGSSF-------SGDLVSNMFNDTDLALQFKKGMEEASKF-LPKSSQLV 219

Query: 198 LLSSADDGRHHSSYGSRGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRH 257
           + +S  +          G+K+  RE+ ++L + R  K SA+ +  +D   + FD +L+  
Sbjct: 220 IDNSVPNRL-------TGKKSHWREE-EHLTEERSKKQSAIYVDETDELTDMFDNILI-F 270

Query: 258 CETKK------DESEPYSSYRESENGSSRKLQQNGQSKGSTGGTTRGRKRGDKRKEVVDL 311
            E K+      +ES P    +E    S+      G+   ++G +          KE  DL
Sbjct: 271 GEAKEQPVCILNESFP----KEPAKASTFSKSPKGEKPEASGNSYT--------KETPDL 318

Query: 312 RGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMH 371
           R +L  CAQAV+ ND+RTA+E L +IR+HSS++GDGT+RLAHYFA++LEARL G  T ++
Sbjct: 319 RTMLVSCAQAVSINDRRTADELLSRIRQHSSSYGDGTERLAHYFANSLEARLAGIGTQVY 378

Query: 372 THISCR-TSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKAT--RLHIIDFGICYG 428
           T +S + TS +D+LKAYQ  +S  PF +++ +FAN +I +LA  A    +HIIDFGI  G
Sbjct: 379 TALSSKKTSTSDMLKAYQTYISVCPFKKIAIIFANHSIMRLASSANAKTIHIIDFGISDG 438

Query: 429 FQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNV 488
           FQWP LI  L+ R      LRITGIELPQ GFRPAE V ETG RL  YC++FN+PFEYN 
Sbjct: 439 FQWPSLIHRLAWRRGSSCKLRITGIELPQRGFRPAEGVIETGRRLAKYCQKFNIPFEYNA 498

Query: 489 IAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIH 548
           IAQKWE+I+LED K+   E   VN + R +NL D+TV   SPRD VL LI++I PDVFI 
Sbjct: 499 IAQKWESIKLEDLKLKEGEFVAVNSLFRFRNLLDETVAVHSPRDTVLKLIRKIKPDVFIP 558

Query: 549 GISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI 596
           GI +G+YNAPFF+ RFRE LFH+S++FD+ D  + RED  R++FE+E 
Sbjct: 559 GILSGSYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVMFEKEF 606
Probable transcription factor involved in plant development.
Arabidopsis thaliana (taxid: 3702)
>sp|O80933|SCL9_ARATH Scarecrow-like protein 9 OS=Arabidopsis thaliana GN=SCL9 PE=2 SV=1 Back     alignment and function description
>sp|Q9LTI5|SCL11_ARATH Scarecrow-like protein 11 OS=Arabidopsis thaliana GN=SCL11 PE=2 SV=1 Back     alignment and function description
>sp|Q9XE58|SCL14_ARATH Scarecrow-like protein 14 OS=Arabidopsis thaliana GN=SCL14 PE=2 SV=2 Back     alignment and function description
>sp|Q9SNB8|SCL30_ARATH Scarecrow-like protein 30 OS=Arabidopsis thaliana GN=SCL30 PE=2 SV=1 Back     alignment and function description
>sp|P0C884|SCL34_ARATH Scarecrow-like protein 34 OS=Arabidopsis thaliana GN=SCL34 PE=3 SV=1 Back     alignment and function description
>sp|Q3EDH0|SCL31_ARATH Scarecrow-like protein 31 OS=Arabidopsis thaliana GN=SCL31 PE=2 SV=3 Back     alignment and function description
>sp|Q9FUZ7|SCR_MAIZE Protein SCARECROW OS=Zea mays GN=SCR PE=2 SV=1 Back     alignment and function description
>sp|Q9AVK4|SCR_PEA Protein SCARECROW OS=Pisum sativum GN=SCR PE=2 SV=1 Back     alignment and function description
>sp|Q9LDL7|PAT1_ARATH Scarecrow-like transcription factor PAT1 OS=Arabidopsis thaliana GN=PAT1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query596
224106445 713 GRAS family transcription factor [Populu 0.983 0.821 0.545 1e-173
255586180688 transcription factor, putative [Ricinus 0.956 0.828 0.550 1e-173
224059472 712 GRAS family transcription factor [Populu 0.984 0.824 0.528 1e-165
225440386 743 PREDICTED: scarecrow-like protein 9 [Vit 0.988 0.792 0.503 1e-158
255586178663 Chitin-inducible gibberellin-responsive 0.927 0.834 0.513 1e-157
302399055684 SCL domain class transcription factor [M 0.951 0.828 0.52 1e-155
224087429 749 GRAS family transcription factor [Populu 0.979 0.779 0.487 1e-150
225434901 704 PREDICTED: scarecrow-like protein 14 [Vi 0.963 0.815 0.504 1e-149
255586184662 Chitin-inducible gibberellin-responsive 0.867 0.780 0.542 1e-149
302399039672 SCL domain class transcription factor [M 0.884 0.784 0.525 1e-149
>gi|224106445|ref|XP_002314168.1| GRAS family transcription factor [Populus trichocarpa] gi|222850576|gb|EEE88123.1| GRAS family transcription factor [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 345/632 (54%), Positives = 423/632 (66%), Gaps = 46/632 (7%)

Query: 1   MDAIFEGFPGSMDGFKFPASSCS---NQNLANAFKLKHNSTNHHPPFLETNPHPPADDNL 57
           MD + + +P SM+ F F  +S S   N+NL N ++L    ++ +P F   NP PP D   
Sbjct: 1   MDTLLQEYPNSMNRFMFDHASVSFSSNRNLFNGYQLNDTMSDPNPSFNSFNPEPPNDSTS 60

Query: 58  NSDGDSPDSSDF---SNAVLKYISEILMEEDLEGKTCMLQDCLALQAAEKSFYDVLGQKY 114
           +S   +  S  +   +N  LK+IS++L+EEDLEGKTCMLQDCLALQAAEK FYDVLGQ+Y
Sbjct: 61  SSSSSNSCSEGYGPSNNVTLKFISDVLLEEDLEGKTCMLQDCLALQAAEKPFYDVLGQEY 120

Query: 115 PPSLNHVLPSLGQNIDTPDVHYTSSSSGSSS------------SDHSFSTSNCLL----D 158
           P S N +L    +  ++PD  +T SS   SS            SD  F  ++  L     
Sbjct: 121 PHSSNQILSCFDKKFESPDNGFTWSSGIDSSNSNPPGNNLVEKSDWIFDQADLDLYQVQT 180

Query: 159 SP----ESNLLVPNLHG-------EIESLLKREGVNFAPK---VSLPKHGEGVLLSSADD 204
           SP    E  LL P+LH        E+ S    E  NF        +            D+
Sbjct: 181 SPVLPLERTLLAPDLHSPVHPHPFEVLSKGGGEADNFLSGNDYFMVSSKSNSSNPPDKDE 240

Query: 205 GRHHSSYGSRGRKNDQREDSDYLEQGRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDE 264
           G  +S+  SRGRKN QREDSD LE+ R  K SA+S A S++  E  DEVLL  C   ++E
Sbjct: 241 G-DYSTNSSRGRKNHQREDSDDLEEERSKKHSALSPAESELS-ELLDEVLL--CPVAQNE 296

Query: 265 SEPYSSYRESENGSSRKLQQNGQSKGSTGGTTRGRKRGDKRKEVVDLRGLLTLCAQAVAS 324
           S P S    S+NG++     N Q KGS G TTRG+KRG K+ EVVDL  LL  CAQAVA 
Sbjct: 297 STPCSLLGNSQNGAA----GNEQRKGSNGRTTRGKKRG-KKGEVVDLSSLLIQCAQAVAI 351

Query: 325 NDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHT-HISCRTSAADI 383
            DQRTA+E L+QIR+HSS+FGD  QRLAHYFA+AL+ RL G  TP  T  ++ RTSAA+I
Sbjct: 352 GDQRTASEILQQIRQHSSSFGDANQRLAHYFANALDTRLAGTTTPTFTLFVNPRTSAAEI 411

Query: 384 LKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPT 443
           LKAYQ+ + A PF RMS  FAN+TI KL +KATRLHIIDFGI YGFQWPCLIQ LS RP 
Sbjct: 412 LKAYQVYVRACPFKRMSNFFANRTILKLEKKATRLHIIDFGILYGFQWPCLIQRLSERPG 471

Query: 444 GPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLEDFKI 503
           GPP LRITGIELPQPGFRPAERVEETG RL+ YCERF VPFEY  IAQKWETIR ED KI
Sbjct: 472 GPPKLRITGIELPQPGFRPAERVEETGRRLERYCERFKVPFEYIPIAQKWETIRYEDLKI 531

Query: 504 DRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIHGISNGTYNAPFFLAR 563
           D+DE  VVNC++R++NLPDDT+V++S RDAVL LI +I PD+FIHG+ NG +NAPFF+ R
Sbjct: 532 DKDEKVVVNCLYRLRNLPDDTIVENSARDAVLKLINKIKPDMFIHGVVNGNFNAPFFVTR 591

Query: 564 FREALFHFSAMFDIFDATVPREDAERMLFERE 595
           FREAL+HFS++FD+F+ATV RED  RM+FE+E
Sbjct: 592 FREALYHFSSLFDMFEATVSREDEHRMMFEKE 623

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255586180|ref|XP_002533749.1| transcription factor, putative [Ricinus communis] gi|223526337|gb|EEF28636.1| transcription factor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224059472|ref|XP_002299863.1| GRAS family transcription factor [Populus trichocarpa] gi|222847121|gb|EEE84668.1| GRAS family transcription factor [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225440386|ref|XP_002267055.1| PREDICTED: scarecrow-like protein 9 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255586178|ref|XP_002533748.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis] gi|223526336|gb|EEF28635.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|302399055|gb|ADL36822.1| SCL domain class transcription factor [Malus x domestica] Back     alignment and taxonomy information
>gi|224087429|ref|XP_002308163.1| GRAS family transcription factor [Populus trichocarpa] gi|222854139|gb|EEE91686.1| GRAS family transcription factor [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225434901|ref|XP_002280765.1| PREDICTED: scarecrow-like protein 14 [Vitis vinifera] Back     alignment and taxonomy information
>gi|255586184|ref|XP_002533751.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis] gi|223526339|gb|EEF28638.1| Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|302399039|gb|ADL36814.1| SCL domain class transcription factor [Malus x domestica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query596
TAIR|locus:2075155583 AT3G46600 [Arabidopsis thalian 0.483 0.493 0.604 2.4e-114
TAIR|locus:2025022769 SCL14 "SCARECROW-like 14" [Ara 0.642 0.498 0.513 3.8e-114
TAIR|locus:2040701718 AT2G37650 [Arabidopsis thalian 0.635 0.527 0.491 4e-104
TAIR|locus:2148293610 AT5G59450 [Arabidopsis thalian 0.645 0.631 0.490 1.1e-103
TAIR|locus:2025032695 AT1G07520 "AT1G07520" [Arabido 0.689 0.591 0.448 3.1e-87
TAIR|locus:2164783490 PAT1 "AT5G48150" [Arabidopsis 0.474 0.577 0.325 1.3e-38
TAIR|locus:2174974584 AT5G66770 "AT5G66770" [Arabido 0.456 0.465 0.339 9.4e-38
TAIR|locus:2008076597 SCL5 "AT1G50600" [Arabidopsis 0.474 0.474 0.329 2.8e-35
TAIR|locus:2080345653 SCR "SCARECROW" [Arabidopsis t 0.464 0.424 0.323 2.5e-33
TAIR|locus:2044973413 SCL21 "AT2G04890" [Arabidopsis 0.466 0.673 0.304 1e-31
TAIR|locus:2075155 AT3G46600 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 899 (321.5 bits), Expect = 2.4e-114, Sum P(3) = 2.4e-114
 Identities = 174/288 (60%), Positives = 214/288 (74%)

Query:   309 VDLRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHT 368
             VD+R LL  CAQAVAS DQR A E+LK+IR HSS  GD TQRL ++FA+ALEAR+ G  T
Sbjct:   207 VDMRNLLMQCAQAVASFDQRRAFEKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMT 266

Query:   369 PMHTHISCRTSAADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYG 428
                +  S RTS  DILKAY+  + A P + M Y  AN+TI +LA KAT LHIIDFGI YG
Sbjct:   267 TPISATSSRTSMVDILKAYKGFVQACPTLIMCYFTANRTINELASKATTLHIIDFGILYG 326

Query:   429 FQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNV 488
             FQWPCLIQ LS R  GPP+LR+TGIELPQ GFRP+ERVEETG RLK +C++FNVPFEY+ 
Sbjct:   327 FQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRFCDKFNVPFEYSF 386

Query:   489 IAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDVFIH 548
             IA+ WE I L+D  I+  E TVVNC+ R++  PD+TV  +SPRD  L L + INPD+F+ 
Sbjct:   387 IAKNWENITLDDLVINSGETTVVNCILRLQYTPDETVSLNSPRDTALKLFRDINPDLFVF 446

Query:   549 GISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFEREI 596
                NGTYN+PFFL RFREALFH S++FD+++ T+  +D  R L ERE+
Sbjct:   447 AEINGTYNSPFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVEREL 494
GO:0005634 "nucleus" evidence=ISM
GO:0016671 "oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor" evidence=IEA
GO:0019538 "protein metabolic process" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS
GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS
GO:0010200 "response to chitin" evidence=IEP;RCA
GO:0002679 "respiratory burst involved in defense response" evidence=RCA
GO:0035556 "intracellular signal transduction" evidence=RCA
TAIR|locus:2025022 SCL14 "SCARECROW-like 14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040701 AT2G37650 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2148293 AT5G59450 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2025032 AT1G07520 "AT1G07520" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164783 PAT1 "AT5G48150" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2174974 AT5G66770 "AT5G66770" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008076 SCL5 "AT1G50600" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2080345 SCR "SCARECROW" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044973 SCL21 "AT2G04890" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query596
pfam03514372 pfam03514, GRAS, GRAS family transcription factor 1e-109
>gnl|CDD|217595 pfam03514, GRAS, GRAS family transcription factor Back     alignment and domain information 
 Score =  331 bits (850), Expect = e-109
 Identities = 121/296 (40%), Positives = 169/296 (57%), Gaps = 14/296 (4%)

Query: 311 LRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPM 370
           L  LL  CA+AV+S D   A   L ++ + +S  GD  QRLA YF +AL ARL  + + +
Sbjct: 1   LVHLLLACAEAVSSGDLSLAQAILARLNQLASPAGDPMQRLAAYFTEALAARLARSGSSI 60

Query: 371 HTHISCRTSA----ADILKAYQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGIC 426
           ++ +    S      ++L AY++     P+++  +  ANQ I +  E   R+HIIDF I 
Sbjct: 61  YSALPPSPSTPSDSVEVLAAYKLFYEVSPYLKFGHFTANQAILEAFEGEERVHIIDFDIG 120

Query: 427 YGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEY 486
            G QWP LIQ L+SRP GPP LRITGI  PQ  F  AE +EETG+RL  + +   VPFE+
Sbjct: 121 QGLQWPSLIQALASRPGGPPHLRITGIGSPQ--FSSAEELEETGDRLAQFADSLGVPFEF 178

Query: 487 N-VIAQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDV 545
           N ++A++ E + LE   +   E   VNCV  +  L D++V   SP    L L+K +NP V
Sbjct: 179 NPLVAKRLEDLDLEMLDVRPGEALAVNCVFALHRLLDESVSLESP--TFLRLVKSLNPKV 236

Query: 546 FIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPRED-----AERMLFEREI 596
                    +N+  FLARF EAL ++SA+FD  +AT+PR+       ER L  REI
Sbjct: 237 VTLVEQEANHNSAPFLARFVEALHYYSALFDSLEATLPRDSEERRKVERELLGREI 292

Sequence analysis of the products of the GRAS (GAI, RGA, SCR) gene family indicates that they share a variable amino-terminus and a highly conserved carboxyl-terminus that contains five recognisable motifs. Proteins in the GRAS family are transcription factors that seem to be involved in development and other processes. Mutation of the SCARECROW (SCR) gene results in a radial pattern defect, loss of a ground tissue layer, in the root. The PAT1 protein is involved in phytochrome A signal transduction. Length = 372

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 596
PF03514374 GRAS: GRAS domain family; InterPro: IPR005202 Sequ 100.0
PRK15451247 tRNA cmo(5)U34 methyltransferase; Provisional 95.51
PRK06202232 hypothetical protein; Provisional 95.36
TIGR02752231 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me 94.12
PLN02233261 ubiquinone biosynthesis methyltransferase 93.54
PF13847152 Methyltransf_31: Methyltransferase domain; PDB: 3T 93.24
PRK14103255 trans-aconitate 2-methyltransferase; Provisional 92.74
TIGR00740239 methyltransferase, putative. A simple BLAST search 92.63
TIGR02716306 C20_methyl_CrtF C-20 methyltransferase BchU. Membe 91.82
PF13649101 Methyltransf_25: Methyltransferase domain; PDB: 3B 91.79
PF01209233 Ubie_methyltran: ubiE/COQ5 methyltransferase famil 91.05
smart00138264 MeTrc Methyltransferase, chemotaxis proteins. Meth 90.18
PRK11207197 tellurite resistance protein TehB; Provisional 88.95
TIGR00477195 tehB tellurite resistance protein TehB. Part of a 88.9
PF0824195 Methyltransf_11: Methyltransferase domain; InterPr 88.59
COG2227243 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- 88.16
PLN02336475 phosphoethanolamine N-methyltransferase 87.37
PRK12335287 tellurite resistance protein TehB; Provisional 87.03
PRK05785226 hypothetical protein; Provisional 87.01
COG2226238 UbiE Methylase involved in ubiquinone/menaquinone 86.51
TIGR01934223 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis 86.25
PTZ00098263 phosphoethanolamine N-methyltransferase; Provision 85.32
PLN02244340 tocopherol O-methyltransferase 85.27
TIGR03438301 probable methyltransferase. This model represents 84.46
PF09243274 Rsm22: Mitochondrial small ribosomal subunit Rsm22 84.2
PLN02585315 magnesium protoporphyrin IX methyltransferase 83.65
PLN02336 475 phosphoethanolamine N-methyltransferase 83.27
PRK11036255 putative S-adenosyl-L-methionine-dependent methylt 83.07
PRK01683258 trans-aconitate 2-methyltransferase; Provisional 82.78
PRK08317241 hypothetical protein; Provisional 82.75
PF13489161 Methyltransf_23: Methyltransferase domain; PDB: 3J 80.75
>PF03514 GRAS: GRAS domain family; InterPro: IPR005202 Sequence analysis of the products of the GRAS (GAI, RGA, SCR) gene family indicates that they share a variable N terminus and a highly conserved C terminus that contains five recognizable motifs [] Back     alignment and domain information 
Probab=100.00  E-value=7.1e-84  Score=684.87  Aligned_cols=283  Identities=42%  Similarity=0.698  Sum_probs=272.1

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHhhccCCCCChhhHHHHHHHHHHHHHHcCCCCCCcccC-CCCCC---hHHHHHH
Q 045079          311 LRGLLTLCAQAVASNDQRTANEQLKQIRRHSSAFGDGTQRLAHYFADALEARLLGAHTPMHTHI-SCRTS---AADILKA  386 (596)
Q Consensus       311 L~~LLl~CAqAVa~~d~~~A~~lL~~I~q~sSp~GD~~QRLA~yFaeAL~aRL~gtg~~~y~~l-s~~~s---~~d~lkA  386 (596)
                      |++||++||+||+.||...|+.+|++|++++||+||++||||+||++||.+||.+++++.|..+ ....+   ..+.++|
T Consensus         1 L~~lLl~cA~Av~~~~~~~A~~lL~~l~~~as~~g~~~qRla~yF~eAL~~Rl~~~~~~~~~~~~~~~~~~~~~~~~~~a   80 (374)
T PF03514_consen    1 LVQLLLACAEAVAAGDFARAQELLARLRQLASPTGDPMQRLAAYFAEALAARLSGSGPGLYSALPPSSPSPSESSEQLAA   80 (374)
T ss_pred             CHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHhhHHHHHhccCcccccCCCCccccccchHHHHHH
Confidence            6899999999999999999999999999999999999999999999999999999999999877 33333   6788999


Q ss_pred             HHHHhhcccchhhhHHHHhHHHHHhhhhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHH
Q 045079          387 YQMSLSAWPFIRMSYLFANQTIRKLAEKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERV  466 (596)
Q Consensus       387 y~lf~~~~Pf~kfa~~~ANqaIleA~~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~l  466 (596)
                      |++|++.|||.||+||||||||+||++|+++||||||||++|+|||+|||+||.|++|||+||||||+.|.++  +...+
T Consensus        81 ~~~~~~~~P~~~fa~~taNqaIleA~~g~~~vHIID~~i~~G~QW~~LiqaLa~R~~gpp~LrIT~i~~~~~~--~~~~l  158 (374)
T PF03514_consen   81 YQLFYELSPFLKFAHFTANQAILEAFEGERRVHIIDFGIGFGVQWPSLIQALASRPGGPPSLRITGIGPPNSG--SADEL  158 (374)
T ss_pred             HHHHHHHhhHHhhhhhchhHHHHHHhccCcceEEEeccCCcchHHHHHHHHHhcCCCCCCeEEEEeccCCCCC--cHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999887  68899


Q ss_pred             HHHHHHHHHHHhhcCCcEEEEee-cccccccCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHHHhhCCcE
Q 045079          467 EETGNRLKSYCERFNVPFEYNVI-AQKWETIRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLIKRINPDV  545 (596)
Q Consensus       467 eetG~rL~~~A~~~gVPFeF~~I-a~~~E~i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~Ir~L~P~V  545 (596)
                      ++||+||.+||+++||||||++| ..+||++++++|++++||+|||||+|+||||+|++....+||+.||+.||+|+|+|
T Consensus       159 ~~~g~rL~~fA~~lgv~fef~~v~~~~~e~l~~~~l~~~~~E~laVn~~~~Lh~l~~~~~~~~~~~~~~L~~ir~L~P~v  238 (374)
T PF03514_consen  159 QETGRRLAEFARSLGVPFEFHPVVVESLEDLDPSMLRLRPGEALAVNCMFQLHHLLDESGALENPRDAFLRVIRSLNPKV  238 (374)
T ss_pred             HHHHHHHHHHHHHcCccEEEEecccCchhhCCHHHhCccCCcEEEEEeehhhhhhccccccccchHHHHHHHHHhcCCCE
Confidence            99999999999999999999996 68999999999999999999999999999999998888889999999999999999


Q ss_pred             EEeeeecCCCCcchhHHHHHHHHHHHHHHhhhhhcCCCCCCHHHHhhccc
Q 045079          546 FIHGISNGTYNAPFFLARFREALFHFSAMFDIFDATVPREDAERMLFERE  595 (596)
Q Consensus       546 fv~~e~n~~~nsp~F~~RF~EAL~~YSAlFDsLdat~pr~~~eR~~iE~e  595 (596)
                      ||++|+|++||+|+|++||.|||+||+|+|||||+++|+++++|+.+|+.
T Consensus       239 vv~~E~ea~~n~~~F~~RF~eal~yYsalfdsle~~~~~~~~~r~~~E~~  288 (374)
T PF03514_consen  239 VVLVEQEADHNSPSFLERFREALHYYSALFDSLEACLPRDSEERLAVERL  288 (374)
T ss_pred             EEEEeecCCCCCCchHHHHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999986

Proteins in the GRAS family are transcription factors that seem to be involved in development and other processes. Mutation of the SCARECROW (SCR) gene results in a radial pattern defect, loss of a ground tissue layer, in the root. The PAT1 protein is involved in phytochrome A signal transduction []. GRAS proteins contain a conserved region of about 350 amino acids that can be divided in 5 motifs, found in the following order: leucine heptad repeat I, the VHIID motif, leucine heptad repeat II, the PFYRE motif and the SAW motif [, ]. Plant specific GRAS proteins have parallels in their motif structure to the animal Signal Transducers and Activators of Transcription (STAT) family of proteins [] which suggests also some parallels in their functions.
>PRK15451 tRNA cmo(5)U34 methyltransferase; Provisional Back     alignment and domain information
>PRK06202 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase Back     alignment and domain information
>PLN02233 ubiquinone biosynthesis methyltransferase Back     alignment and domain information
>PF13847 Methyltransf_31: Methyltransferase domain; PDB: 3T0I_B 3SVZ_B 3SXJ_A 3F4K_A 3GU3_B 2GH1_A 1R8Y_E 1R8X_B 2B3T_A 1T43_A Back     alignment and domain information
>PRK14103 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>TIGR00740 methyltransferase, putative Back     alignment and domain information
>TIGR02716 C20_methyl_CrtF C-20 methyltransferase BchU Back     alignment and domain information
>PF13649 Methyltransf_25: Methyltransferase domain; PDB: 3BXO_B 3GGD_A 3PX2_A 3PX3_A 3PFH_D 3PFG_A 1Y8C_A Back     alignment and domain information
>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities [] Back     alignment and domain information
>smart00138 MeTrc Methyltransferase, chemotaxis proteins Back     alignment and domain information
>PRK11207 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>TIGR00477 tehB tellurite resistance protein TehB Back     alignment and domain information
>PF08241 Methyltransf_11: Methyltransferase domain; InterPro: IPR013216 Methyl transfer from the ubiquitous S-adenosyl-L-methionine (SAM) to either nitrogen, oxygen or carbon atoms is frequently employed in diverse organisms ranging from bacteria to plants and mammals Back     alignment and domain information
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>PRK12335 tellurite resistance protein TehB; Provisional Back     alignment and domain information
>PRK05785 hypothetical protein; Provisional Back     alignment and domain information
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] Back     alignment and domain information
>TIGR01934 MenG_MenH_UbiE ubiquinone/menaquinone biosynthesis methyltransferases Back     alignment and domain information
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional Back     alignment and domain information
>PLN02244 tocopherol O-methyltransferase Back     alignment and domain information
>TIGR03438 probable methyltransferase Back     alignment and domain information
>PF09243 Rsm22: Mitochondrial small ribosomal subunit Rsm22; InterPro: IPR015324 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms Back     alignment and domain information
>PLN02585 magnesium protoporphyrin IX methyltransferase Back     alignment and domain information
>PLN02336 phosphoethanolamine N-methyltransferase Back     alignment and domain information
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional Back     alignment and domain information
>PRK01683 trans-aconitate 2-methyltransferase; Provisional Back     alignment and domain information
>PRK08317 hypothetical protein; Provisional Back     alignment and domain information
>PF13489 Methyltransf_23: Methyltransferase domain; PDB: 3JWJ_A 3JWH_B 2AOV_B 2AOT_A 1JQD_B 2AOX_A 1JQE_A 2AOU_B 2AOW_A 3DLI_C Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query596
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-11
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 64.5 bits (156), Expect = 8e-11
 Identities = 99/676 (14%), Positives = 177/676 (26%), Gaps = 215/676 (31%)

Query: 39  NHHPPFLETNPH--------PPADDNLNSDGDSPDSSDFSNAVLKY--ISEILMEEDLEG 88
           +HH  F ET  H           +D    + D  D  D   ++L    I  I+M +D   
Sbjct: 4   HHHMDF-ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVS 62

Query: 89  KTCMLQDCLALQAAE--KSFY-DVLGQKYP------------PSLNHVLPSLGQNIDTPD 133
            T  L   L  +  E  + F  +VL   Y             PS+   +           
Sbjct: 63  GTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRM----------- 111

Query: 134 VHYTSSSSGSSSSDHSFSTSNCLLDSPESNLLVPNLHGEIESLLKREGVNFAPKVSLPKH 193
             Y        + +  F          + N+     + ++   L    +  A  V +   
Sbjct: 112 --YIEQRDRLYNDNQVF---------AKYNVSRLQPYLKLRQALLE--LRPAKNVLI--D 156

Query: 194 GEG-----VLLSSA--DDGRHHSSYG-----SRGRKNDQRE------------DSDYLEQ 229
           G        +                     +    N                D ++  +
Sbjct: 157 GVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR 216

Query: 230 GRRSKLSAVSLAVSDVKLERFDEVLLRHCETKKDESEPYSSYRES----ENGSSRKLQQ- 284
              S  S + L +  ++      +L                Y        N  + K    
Sbjct: 217 SDHS--SNIKLRIHSIQ-AELRRLLKSK------------PYENCLLVLLNVQNAKAWNA 261

Query: 285 -NGQSKGSTGGTTRGRKRGD-------KRKEVVDLRGLLT------LCAQAVASNDQRTA 330
            N   K     TTR ++  D           +      LT      L  + +    Q   
Sbjct: 262 FNLSCK--ILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 331 NEQLKQIRRHSSAFG----DGT---QRLAHYFADALEARL---LGAHTPMHTHISCRTSA 380
            E L    R  S       DG        H   D L   +   L    P           
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEP----------- 368

Query: 381 ADILKAYQMSLS-----AW-PFIRMSYLFAN---QTIRKLAEKATRLHIIDFGICYGFQW 431
               +     LS     A  P I +S ++ +     +  +  K  +  +++       + 
Sbjct: 369 -AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE-------KQ 420

Query: 432 PCLIQILSSRPTGPPMLRITGIEL---PQPGFRPA--ERVEETGNRLKSYC-ERFNVPFE 485
           P               + I  I L    +     A    + +  N  K++  +    P+ 
Sbjct: 421 PK-----------ESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYL 469

Query: 486 ----YNVI---------AQKWETIR--LEDF-----KIDRDEVTVVNCVHRMKNLPDDT- 524
               Y+ I          ++    R    DF     KI R + T  N    + N      
Sbjct: 470 DQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI-RHDSTAWNASGSILNTLQQLK 528

Query: 525 -----VVDSSPR-DAVLDLIKRINPDVFIHGISNGTYNAPFFLARFREALFHFSAMFD-- 576
                + D+ P+ + +++ I       F+  I      + +        L   + M +  
Sbjct: 529 FYKPYICDNDPKYERLVNAILD-----FLPKIEENLICSKY------TDLLRIALMAEDE 577

Query: 577 -IFDATVPREDAERML 591
            IF      E+A + +
Sbjct: 578 AIF------EEAHKQV 587

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query596
4gek_A261 TRNA (CMO5U34)-methyltransferase; structural genom 96.0
3htx_A950 HEN1; HEN1, small RNA methyltransferase, protein-R 95.71
1vl5_A260 Unknown conserved protein BH2331; putative methylt 94.74
3dlc_A219 Putative S-adenosyl-L-methionine-dependent methylt 94.46
3jwg_A219 HEN1, methyltransferase type 12; 1.90A {Clostridiu 94.35
2aot_A292 HMT, histamine N-methyltransferase; classic methyl 94.31
3dtn_A234 Putative methyltransferase MM_2633; structural gen 93.5
3bkx_A275 SAM-dependent methyltransferase; YP_807781.1, cycl 93.42
3dh0_A219 SAM dependent methyltransferase; cystal structure, 93.07
3jwh_A217 HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena 92.86
1xxl_A239 YCGJ protein; structural genomics, protein structu 92.66
3ccf_A279 Cyclopropane-fatty-acyl-phospholipid synthase; YP_ 91.92
3m70_A286 Tellurite resistance protein TEHB homolog; structu 91.91
1kpg_A287 CFA synthase;, cyclopropane-fatty-acyl-phospholipi 91.04
2qe6_A274 Uncharacterized protein TFU_2867; putative methylt 90.7
2o57_A297 Putative sarcosine dimethylglycine methyltransfera 90.4
3g5l_A253 Putative S-adenosylmethionine dependent methyltran 90.27
3u81_A221 Catechol O-methyltransferase; neurotransmitter deg 90.22
3hnr_A220 Probable methyltransferase BT9727_4108; structural 90.04
3kkz_A267 Uncharacterized protein Q5LES9; putative methyltra 89.77
3h2b_A203 SAM-dependent methyltransferase; alpha-beta protei 89.76
1nkv_A256 Hypothetical protein YJHP; structural genomics, PS 89.46
2yqz_A263 Hypothetical protein TTHA0223; RNA methyltransfera 89.42
2xvm_A199 Tellurite resistance protein TEHB; antibiotic resi 89.29
2vdw_A302 Vaccinia virus capping enzyme D1 subunit; nucleoti 89.1
3bus_A273 REBM, methyltransferase; rebeccamycin synthesis; H 89.07
4htf_A285 S-adenosylmethionine-dependent methyltransferase; 87.91
3ujc_A266 Phosphoethanolamine N-methyltransferase; parasite; 87.48
3hem_A302 Cyclopropane-fatty-acyl-phospholipid synthase 2; p 87.16
3i9f_A170 Putative type 11 methyltransferase; structural gen 86.87
3ofk_A216 Nodulation protein S; NODS, N-methyltransferase, S 86.79
3g5t_A 299 Trans-aconitate 3-methyltransferase; structural ge 86.76
3ou2_A218 SAM-dependent methyltransferase; O-methyltransfera 86.7
1xtp_A254 LMAJ004091AAA; SGPP, structural genomics, PSI, pro 86.7
2yxd_A183 Probable cobalt-precorrin-6Y C(15)-methyltransfer 86.63
3i53_A332 O-methyltransferase; CO-complex, rossmann-like fol 86.59
2p7i_A250 Hypothetical protein; putative methyltransferase, 86.4
3mgg_A276 Methyltransferase; NYSGXRC, PSI-II, protein struct 86.37
3thr_A293 Glycine N-methyltransferase; GNMT, folate, methylt 86.19
3f4k_A257 Putative methyltransferase; structural genomics, P 86.03
4e2x_A 416 TCAB9; kijanose, tetronitrose, tetradeoxy sugar, s 85.98
3sm3_A235 SAM-dependent methyltransferases; NESG, structural 85.87
3dp7_A363 SAM-dependent methyltransferase; structural genomi 85.57
3mq2_A218 16S rRNA methyltransferase; methyltranferase, ribo 85.38
3lcc_A235 Putative methyl chloride transferase; halide methy 84.2
3mcz_A352 O-methyltransferase; adomet_mtases, S-adenosylmeth 84.18
3bgv_A 313 MRNA CAP guanine-N7 methyltransferase; alternative 83.49
3l8d_A242 Methyltransferase; structural genomics, PSI, nysgr 83.41
2fk8_A318 Methoxy mycolic acid synthase 4; S-adenosylmethion 83.2
3uwp_A 438 Histone-lysine N-methyltransferase, H3 lysine-79; 83.13
1ve3_A227 Hypothetical protein PH0226; dimer, riken structur 83.06
4fsd_A 383 Arsenic methyltransferase; rossmann fold; 1.75A {C 82.64
1qzz_A374 RDMB, aclacinomycin-10-hydroxylase; anthracycline, 82.54
2r3s_A335 Uncharacterized protein; methyltransferase domain, 82.36
3gwz_A369 MMCR; methyltransferase, mitomycin, S-adenosyl met 81.74
3e8s_A227 Putative SAM dependent methyltransferase; NP_74470 81.53
2p35_A259 Trans-aconitate 2-methyltransferase; SAM dependent 81.31
3r0q_C 376 Probable protein arginine N-methyltransferase 4.2; 81.2
1x19_A359 CRTF-related protein; methyltransferase, bacterioc 81.01
1dus_A194 MJ0882; hypothetical protein, methanococcus jannas 80.62
1y8c_A246 S-adenosylmethionine-dependent methyltransferase; 80.48
3bkw_A243 MLL3908 protein, S-adenosylmethionine dependent me 80.3
3e23_A211 Uncharacterized protein RPA2492; alpha-beta protei 80.27
3fzg_A200 16S rRNA methylase; methyltransferase, plasmid, tr 80.16
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* Back     alignment and structure
Probab=96.00  E-value=0.028  Score=55.96  Aligned_cols=109  Identities=17%  Similarity=0.216  Sum_probs=65.3

Q ss_pred             CeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCCCCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccc
Q 045079          416 TRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPGFRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWET  495 (596)
Q Consensus       416 ~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~gfrp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~  495 (596)
                      ..-+|+|+|.+.|.    +...|+++- ++|..+|||||..      ...|+.+.+++.++.  ...+++|..  ...++
T Consensus        70 ~~~~vLDlGcGtG~----~~~~la~~~-~~~~~~v~gvD~s------~~ml~~A~~~~~~~~--~~~~v~~~~--~D~~~  134 (261)
T 4gek_A           70 PGTQVYDLGCSLGA----ATLSVRRNI-HHDNCKIIAIDNS------PAMIERCRRHIDAYK--APTPVDVIE--GDIRD  134 (261)
T ss_dssp             TTCEEEEETCTTTH----HHHHHHHTC-CSSSCEEEEEESC------HHHHHHHHHHHHTSC--CSSCEEEEE--SCTTT
T ss_pred             CCCEEEEEeCCCCH----HHHHHHHhc-CCCCCEEEEEECC------HHHHHHHHHHHHhhc--cCceEEEee--ccccc
Confidence            44589999999984    444555443 4467899999973      355776666655432  223455532  23333


Q ss_pred             cCcccccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH-HhhCCcEE-Eeeeec
Q 045079          496 IRLEDFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI-KRINPDVF-IHGISN  552 (596)
Q Consensus       496 i~~edL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I-r~L~P~Vf-v~~e~n  552 (596)
                      +.     ..+  +=+|-|.+.|||+.++      -|..+|+.| |.|+|.-. ++.+..
T Consensus       135 ~~-----~~~--~d~v~~~~~l~~~~~~------~~~~~l~~i~~~LkpGG~lii~e~~  180 (261)
T 4gek_A          135 IA-----IEN--ASMVVLNFTLQFLEPS------ERQALLDKIYQGLNPGGALVLSEKF  180 (261)
T ss_dssp             CC-----CCS--EEEEEEESCGGGSCHH------HHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred             cc-----ccc--cccceeeeeeeecCch------hHhHHHHHHHHHcCCCcEEEEEecc
Confidence            33     222  2234456788888754      256788887 55799874 444443
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana} Back     alignment and structure
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41 Back     alignment and structure
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis} Back     alignment and structure
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A Back     alignment and structure
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A* Back     alignment and structure
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei} Back     alignment and structure
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei} Back     alignment and structure
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus} Back     alignment and structure
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A Back     alignment and structure
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A* Back     alignment and structure
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413} Back     alignment and structure
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae} Back     alignment and structure
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* Back     alignment and structure
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca} Back     alignment and structure
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 Back     alignment and structure
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str} Back     alignment and structure
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... Back     alignment and structure
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian} Back     alignment and structure
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A* Back     alignment and structure
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 Back     alignment and structure
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A Back     alignment and structure
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A* Back     alignment and structure
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus} Back     alignment and structure
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes} Back     alignment and structure
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli} Back     alignment and structure
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* Back     alignment and structure
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* Back     alignment and structure
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus} Back     alignment and structure
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A* Back     alignment and structure
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae} Back     alignment and structure
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* Back     alignment and structure
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42 Back     alignment and structure
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A* Back     alignment and structure
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A Back     alignment and structure
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei} Back     alignment and structure
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A* Back     alignment and structure
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A* Back     alignment and structure
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A* Back     alignment and structure
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei} Back     alignment and structure
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus} Back     alignment and structure
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP} Back     alignment and structure
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana} Back     alignment and structure
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis} Back     alignment and structure
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A* Back     alignment and structure
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis} Back     alignment and structure
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* Back     alignment and structure
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A* Back     alignment and structure
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43 Back     alignment and structure
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A Back     alignment and structure
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A* Back     alignment and structure
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme} Back     alignment and structure
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A* Back     alignment and structure
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440} Back     alignment and structure
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str} Back     alignment and structure
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana} Back     alignment and structure
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A* Back     alignment and structure
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4 Back     alignment and structure
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43 Back     alignment and structure
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti} Back     alignment and structure
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris} Back     alignment and structure
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query596
d1jqea_280 Histamine methyltransferase {Human (Homo sapiens) 96.85
d1im8a_225 Hypothetical protein HI0319 (YecO) {Haemophilus in 96.71
d1ve3a1226 Hypothetical protein PH0226 {Archaeon Pyrococcus h 95.61
d1xxla_234 Hypothetical protein YcgJ {Bacillus subtilis [TaxI 94.97
d2i6ga1198 Putative methyltransferase TehB {Salmonella typhim 94.8
d1vl5a_231 Hypothetical protein BH2331 {Bacillus halodurans [ 94.33
d2ex4a1222 Adrenal gland protein AD-003 (C9orf32) {Human (Hom 94.08
d2o57a1282 Putative sarcosine dimethylglycine methyltransfera 93.14
d1qzza2256 Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu 93.05
d2fk8a1280 Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri 92.51
d1nkva_245 Hypothetical Protein YjhP {Escherichia coli [TaxId 92.42
d2gh1a1 281 Methyltransferase BC2162 {Bacillus cereus [TaxId: 92.14
d1tw3a2253 Carminomycin 4-O-methyltransferase {Streptomyces p 91.92
d1y8ca_246 Putative methyltransferase CAC2371 {Clostridium ac 91.81
d2avna1246 Hypothetical methyltransferase TM1389 {Thermotoga 91.39
d1ri5a_252 mRNA cap (Guanine N-7) methyltransferase {Fungus ( 90.24
d1wzna1251 Hypothetical methyltransferase PH1305 {Archaeon Py 89.29
d1vlma_208 Possible histamine N-methyltransferase TM1293 {The 88.3
d1xtpa_254 Hypothetical protein Lmaj004091aaa (LmjF30.0810) { 85.39
d1xvaa_292 Glycine N-methyltransferase {Rat (Rattus norvegicu 83.37
d1g6q1_ 328 Arginine methyltransferase, HMT1 {Baker's yeast (S 81.97
d1p91a_268 rRNA methyltransferase RlmA {Escherichia coli [Tax 80.96
d1pjza_201 Thiopurine S-methyltransferase {Pseudomonas syring 80.66
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0025  Score=60.63  Aligned_cols=147  Identities=10%  Similarity=0.102  Sum_probs=91.5

Q ss_pred             HHHHHHHhhcccchhhhHHHHhHHHHHhh----hhcCeeEEEEceeccccchHHHHHHHhcCCCCCCeEEEEeecCCCCC
Q 045079          384 LKAYQMSLSAWPFIRMSYLFANQTIRKLA----EKATRLHIIDFGICYGFQWPCLIQILSSRPTGPPMLRITGIELPQPG  459 (596)
Q Consensus       384 lkAy~lf~~~~Pf~kfa~~~ANqaIleA~----~g~~~vHIIDfgI~~G~QWp~Liq~LA~R~gGPP~LRITgI~~pq~g  459 (596)
                      .++|+.|+..+.-...-.-+-.+.+-+.+    .+++.+.|.|+|.+.|.-=-.|+..|..+.. ...+++||||+.   
T Consensus         4 ~~~f~~~~~~s~~~~~~~~~~~~~l~~~l~~l~~~~~~~~VLDiGcG~G~~~~~ll~~l~~~~~-~~~~~~~~vD~s---   79 (280)
T d1jqea_           4 VESFRRFLNHSTEHQCMQEFMDKKLPGIIGRIGDTKSEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPS---   79 (280)
T ss_dssp             HHHHHHHHHTBSHHHHHHHHHHHTHHHHTTTTTTTCSEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECCC---
T ss_pred             HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCHHHHHHHHHhhhhcc-CCceEEEEEeCc---
Confidence            46777777766666655555555544433    3577889999999999755566777765543 357899999862   


Q ss_pred             CCChHHHHHHHHHHHHHHhhcCCcEEEEeecccccccCcc-cccccCCCeEEEEeeccccCCCCCCcCCCCcHHHHHHHH
Q 045079          460 FRPAERVEETGNRLKSYCERFNVPFEYNVIAQKWETIRLE-DFKIDRDEVTVVNCVHRMKNLPDDTVVDSSPRDAVLDLI  538 (596)
Q Consensus       460 frp~~~leetG~rL~~~A~~~gVPFeF~~Ia~~~E~i~~e-dL~i~~dE~LaVN~~f~Lh~L~Desv~~~spRd~vL~~I  538 (596)
                         ...++.+.+++.+...--++.|+++...  +|.+... ......+-.=+|-|.+.|||+.|       |. .+|+.+
T Consensus        80 ---~~~l~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~fD~I~~~~~l~~~~d-------~~-~~l~~l  146 (280)
T d1jqea_          80 ---AEQIAKYKELVAKISNLENVKFAWHKET--SSEYQSRMLEKKELQKWDFIHMIQMLYYVKD-------IP-ATLKFF  146 (280)
T ss_dssp             ---HHHHHHHHHHHTTCCSCTTEEEEEECSC--HHHHHHHHTTSSSCCCEEEEEEESCGGGCSC-------HH-HHHHHH
T ss_pred             ---HHHHHHHHHHHhhccccccccccchhhh--hhhhcchhcccCCCCceeEEEEccceecCCC-------HH-HHHHHH
Confidence               3456666666655444445667666543  2222111 11223455667888888999875       33 455554


Q ss_pred             -HhhCCcEEE
Q 045079          539 -KRINPDVFI  547 (596)
Q Consensus       539 -r~L~P~Vfv  547 (596)
                       +-|+|.-.+
T Consensus       147 ~~~LkpgG~l  156 (280)
T d1jqea_         147 HSLLGTNAKM  156 (280)
T ss_dssp             HHTEEEEEEE
T ss_pred             HhhCCCCCEE
Confidence             667998543
>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} Back     information, alignment and structure
>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} Back     information, alignment and structure
>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} Back     information, alignment and structure
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} Back     information, alignment and structure
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} Back     information, alignment and structure
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} Back     information, alignment and structure