Citrus Sinensis ID: 045110
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 376 | ||||||
| 255559943 | 392 | RNA splicing protein mrs2, mitochondrial | 0.994 | 0.954 | 0.779 | 1e-158 | |
| 225437239 | 389 | PREDICTED: magnesium transporter MRS2-I- | 0.989 | 0.956 | 0.776 | 1e-150 | |
| 225432906 | 389 | PREDICTED: magnesium transporter MRS2-I | 0.994 | 0.961 | 0.744 | 1e-148 | |
| 224099887 | 394 | magnesium transporter [Populus trichocar | 0.994 | 0.949 | 0.722 | 1e-144 | |
| 226510550 | 384 | LOC100283487 [Zea mays] gi|195635131|gb| | 0.984 | 0.963 | 0.729 | 1e-143 | |
| 223974765 | 384 | unknown [Zea mays] gi|414872715|tpg|DAA5 | 0.984 | 0.963 | 0.727 | 1e-142 | |
| 356572243 | 388 | PREDICTED: magnesium transporter MRS2-I- | 0.978 | 0.948 | 0.744 | 1e-140 | |
| 242033009 | 387 | hypothetical protein SORBIDRAFT_01g00850 | 0.938 | 0.912 | 0.755 | 1e-140 | |
| 224111064 | 398 | magnesium transporter [Populus trichocar | 0.997 | 0.942 | 0.714 | 1e-140 | |
| 296439674 | 381 | RecName: Full=Magnesium transporter MRS2 | 0.944 | 0.931 | 0.756 | 1e-139 |
| >gi|255559943|ref|XP_002520990.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis] gi|223539827|gb|EEF41407.1| RNA splicing protein mrs2, mitochondrial, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 307/394 (77%), Positives = 336/394 (85%), Gaps = 20/394 (5%)
Query: 1 MNRDGLVVTAVDQSSLKKKTAVSSSWILLDREAQSTTLDVDKHVIMRRVQIHARDLRILD 60
M RD VV A Q+SLKKKTAVS SWILLD QS+ LDVDK+ IMRRVQIHARDLRILD
Sbjct: 1 MERDIAVVPAEPQASLKKKTAVSRSWILLDSNGQSSILDVDKYAIMRRVQIHARDLRILD 60
Query: 61 PMLNYPSTILGREKVIVLNLEHIKAIITADEVLLRDPMDDNVIPIVEQLQRRLASDYPIS 120
P+L+YPSTILGRE+VIVLNLEHIKAIITA+EVLLRDP+DDNVIPIVE+LQRRL Y +
Sbjct: 61 PLLSYPSTILGRERVIVLNLEHIKAIITAEEVLLRDPLDDNVIPIVEELQRRLPLVYVTA 120
Query: 121 QGQGEEEDNHPGVRNNFET-----------------EAICSFLDARTRELETDAYPALDE 163
EE+ HPGVR + +T EAICSFLDARTRELETDAYPALDE
Sbjct: 121 TQVQVEEEEHPGVRKDVDTDQENEFPFEFRALEVALEAICSFLDARTRELETDAYPALDE 180
Query: 164 LTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMADLYLSRKLAVASSPV 223
LTSKISS NLDRVRKLKS+MTRLTNRVQK+RDELEQLLDDDDDMADLYLSRKLA +SSP+
Sbjct: 181 LTSKISSLNLDRVRKLKSSMTRLTNRVQKIRDELEQLLDDDDDMADLYLSRKLA-SSSPI 239
Query: 224 SGSGAP-HWFLNSPTIGSKISRTISRGSMETTQEENDVEELEMLLEAYFMQIDGTLNKLS 282
S GAP +WFL+SPTIGSKISRT SR S+ T Q E+DVEELEMLLEAYFMQIDGTLNKL+
Sbjct: 240 SSYGAPPNWFLSSPTIGSKISRT-SRASVTTMQGEHDVEELEMLLEAYFMQIDGTLNKLA 298
Query: 283 TLREYIDDTEDYINIQLDNHRNQLIQLELFLCSGTVCLSVYSLVAAIFGMNIPYTWKTGH 342
TLREYIDDTEDYINIQLDNHRNQLIQLELFLCSGTVCLSVYSLVAAIFGMN+ YTW+ GH
Sbjct: 299 TLREYIDDTEDYINIQLDNHRNQLIQLELFLCSGTVCLSVYSLVAAIFGMNLQYTWREGH 358
Query: 343 GYVFKWVVVITGIVCALLFSIIIFYARHKGLVGS 376
GYVFKWVV++T ++CA LF+ II YARHKGLVGS
Sbjct: 359 GYVFKWVVILTSLICATLFASIISYARHKGLVGS 392
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225437239|ref|XP_002282145.1| PREDICTED: magnesium transporter MRS2-I-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225432906|ref|XP_002284181.1| PREDICTED: magnesium transporter MRS2-I isoform 1 [Vitis vinifera] gi|297737159|emb|CBI26360.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|224099887|ref|XP_002311660.1| magnesium transporter [Populus trichocarpa] gi|222851480|gb|EEE89027.1| magnesium transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|226510550|ref|NP_001149859.1| LOC100283487 [Zea mays] gi|195635131|gb|ACG37034.1| metal ion transporter [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|223974765|gb|ACN31570.1| unknown [Zea mays] gi|414872715|tpg|DAA51272.1| TPA: metal ion transporter [Zea mays] | Back alignment and taxonomy information |
|---|
| >gi|356572243|ref|XP_003554279.1| PREDICTED: magnesium transporter MRS2-I-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|242033009|ref|XP_002463899.1| hypothetical protein SORBIDRAFT_01g008500 [Sorghum bicolor] gi|241917753|gb|EER90897.1| hypothetical protein SORBIDRAFT_01g008500 [Sorghum bicolor] | Back alignment and taxonomy information |
|---|
| >gi|224111064|ref|XP_002315734.1| magnesium transporter [Populus trichocarpa] gi|222864774|gb|EEF01905.1| magnesium transporter [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|296439674|sp|B8AJT9.1|MRS2I_ORYSI RecName: Full=Magnesium transporter MRS2-I gi|218193730|gb|EEC76157.1| hypothetical protein OsI_13458 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 376 | ||||||
| TAIR|locus:2174799 | 394 | MGT9 "magnesium transporter 9" | 0.680 | 0.649 | 0.665 | 1.2e-81 | |
| TAIR|locus:2077665 | 436 | MGT6 "magnesium transporter 6" | 0.627 | 0.541 | 0.450 | 2.6e-67 | |
| TAIR|locus:2091176 | 484 | MGT4 "magnesium transporter 4" | 0.303 | 0.235 | 0.508 | 8.9e-66 | |
| TAIR|locus:2044254 | 421 | MGT3 "magnesium transporter 3" | 0.465 | 0.415 | 0.434 | 6.9e-61 | |
| TAIR|locus:2144746 | 294 | AT5G09720 [Arabidopsis thalian | 0.680 | 0.870 | 0.531 | 1.4e-57 | |
| TAIR|locus:2200542 | 442 | MGT2 "magnesium transporter 2" | 0.375 | 0.319 | 0.442 | 1.1e-56 | |
| TAIR|locus:2025767 | 443 | MGT1 "magnesium transporter 1" | 0.375 | 0.318 | 0.452 | 4.8e-56 | |
| TAIR|locus:2139905 | 408 | MGT5 "AT4G28580" [Arabidopsis | 0.917 | 0.845 | 0.352 | 1.1e-46 | |
| UNIPROTKB|F1P344 | 379 | MRS2 "Uncharacterized protein" | 0.305 | 0.303 | 0.373 | 2.5e-16 | |
| RGD|708529 | 434 | Mrs2 "MRS2 magnesium homeostas | 0.244 | 0.211 | 0.427 | 4.6e-15 |
| TAIR|locus:2174799 MGT9 "magnesium transporter 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 173/260 (66%), Positives = 190/260 (73%)
Query: 120 SQGQGEEEDNHPGVRNNFET--EAICSFLDARTRELETDAYPALDELTSKISSRNLDRVR 177
+ G +ED P E EAICSFL ART ELET AYPALDELTSKISSRNLDRVR
Sbjct: 136 NDGDTGDEDESPFEFRALEVALEAICSFLAARTAELETAAYPALDELTSKISSRNLDRVR 195
Query: 178 KLKSAMTRLTNRVQKVRXXXXXXXXXXXXXXXXXXSRKLXXXXXXXXXXXXXHWFLNSPT 237
KLKSAMTRLT RVQKVR SRKL +W+ SPT
Sbjct: 196 KLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLSSASSPISSIGEPNWYTTSPT 255
Query: 238 IGSKISRTISRGSMETTQ-EENDVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYIN 296
IGSKISR SR S+ T +ENDVEELEMLLEAYFMQID TLN+L+TLREYIDDTEDYIN
Sbjct: 256 IGSKISRA-SRASLATVHGDENDVEELEMLLEAYFMQIDSTLNRLTTLREYIDDTEDYIN 314
Query: 297 IQLDNHRNQLIQLELFLCSGTVCLSVYSLVAAIFGMNIPYTWKTGHGYVFKWVVVITGIV 356
IQLDNHRNQLIQLEL L SGTVCLS+YSLVA IFGMNIPYTW GHGY+FK+VV +TG +
Sbjct: 315 IQLDNHRNQLIQLELVLSSGTVCLSMYSLVAGIFGMNIPYTWNDGHGYMFKYVVGLTGTL 374
Query: 357 CALLFSIIIFYARHKGLVGS 376
C ++F II+ YAR+KGLVGS
Sbjct: 375 CVVVFVIIMSYARYKGLVGS 394
|
|
| TAIR|locus:2077665 MGT6 "magnesium transporter 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2091176 MGT4 "magnesium transporter 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2044254 MGT3 "magnesium transporter 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2144746 AT5G09720 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2200542 MGT2 "magnesium transporter 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2025767 MGT1 "magnesium transporter 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2139905 MGT5 "AT4G28580" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1P344 MRS2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| RGD|708529 Mrs2 "MRS2 magnesium homeostasis factor homolog (S. cerevisiae)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 376 | |||
| cd12823 | 323 | cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae | 1e-115 | |
| pfam01544 | 291 | pfam01544, CorA, CorA-like Mg2+ transporter protei | 2e-04 | |
| cd12821 | 285 | cd12821, EcCorA_ZntB-like, Escherichia coli CorA-S | 0.001 |
| >gnl|CDD|213357 cd12823, Mrs2_Mfm1p-like, Saccharomyces cerevisiae inner mitochondrial membrane Mg2+ transporters Mfm1p and Mrs2p-like family | Back alignment and domain information |
|---|
Score = 336 bits (864), Expect = e-115
Identities = 159/359 (44%), Positives = 216/359 (60%), Gaps = 47/359 (13%)
Query: 26 WILLDREAQSTTLDVDKHVIMRRVQIHARDLRILDPML-NYPSTILGREKVIVLNLEHIK 84
W ++D +T +++DK ++R + + RDLR+LDP L +YP +IL RE I++NLEHI+
Sbjct: 1 WTVIDSTGNATVVELDKSELLRELGLQPRDLRLLDPTLTSYPPSILVRENAILVNLEHIR 60
Query: 85 AIITADEVLLRDP---MDDNVIPIVEQLQRRLASDYPISQGQGEEEDNHPGVRNNFETEA 141
AIITADEVLL DP V +E+LQRRLAS S+ + ED+ P FE A
Sbjct: 61 AIITADEVLLFDPDGSSSALVSAFLEELQRRLAS-SNGSESESGGEDSLP-----FEFRA 114
Query: 142 -------ICSFLDARTRELETDAYPALDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVR 194
+CS L+A + LE +A P LDELT KIS+ NL+R+ LK + L RVQKVR
Sbjct: 115 LEAALEEVCSHLEAELKRLEPEALPLLDELTDKISTSNLERLLPLKRRLVELETRVQKVR 174
Query: 195 DELEQLLDDDDDMADLYLSRKLAVASSPVSGSGAPHWFLNSPTIGSKISRTISRGSMETT 254
D LE+LLDDD+DMAD+YL+ K A G E++
Sbjct: 175 DALEELLDDDEDMADMYLTDKAA---------GPERL--------------------ESS 205
Query: 255 QEENDVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLC 314
++E+D EE+EMLLEAY Q+D LNKL LREYIDDTE+ IN+ LD+ RNQL++LEL L
Sbjct: 206 RKEDDHEEVEMLLEAYLQQVDELLNKLEELREYIDDTEELINLILDSRRNQLMRLELKLS 265
Query: 315 SGTVCLSVYSLVAAIFGMNIPYTWKTGHGYVFKWVVVITGIVCALLFSIIIFYARHKGL 373
GT+ L+V +LVA +FGMN+P + Y F V + + L+F +++ Y R K L
Sbjct: 266 IGTLSLAVGTLVAGLFGMNLPSGLEE-SPYAFWIVTGGSVVGSILIFIVVLRYLRRKRL 323
|
A eukaryotic subfamily belonging to the Escherichia coli CorA-Salmonella typhimurium ZntB_like family (EcCorA_ZntB-like) family of the MIT superfamily of essential membrane proteins involved in transporting divalent cations (uptake or efflux) across membranes. This functionally diverse subfamily includes the inner mitochondrial membrane Mg2+ transporters Saccharomyces cerevisiae Mfm1p/Lpe10p, Mrs2p, and human MRS2/ MRS2L. It also includes a family of Arabidopsis thaliana proteins (AtMGTs) some of which are localized to distinct tissues, and not all of which can transport Mg2+. Structures of the intracellular domain of two EcCorA_ZntB-like family transporters: Vibrio parahaemolyticus and Salmonella typhimurium ZntB form funnel-shaped homopentamers, the tip of the funnel is formed from two C-terminal transmembrane (TM) helices from each monomer, and the large opening of the funnel from the N-terminal cytoplasmic domains. The GMN signature motif of the MIT superfamily occurs just after TM1, mutation within this motif is known to abolish Mg2+ transport through Salmonella typhimurium CorA, and Mrs2p. Natural variants such as GVN and GIN, as in some ZntB family proteins, may be associated with the transport of different divalent cations, such as zinc and cadmium. The functional diversity of MIT transporters may also be due to minor structural differences regulating gating, substrate selection, and transport. Length = 323 |
| >gnl|CDD|216560 pfam01544, CorA, CorA-like Mg2+ transporter protein | Back alignment and domain information |
|---|
| >gnl|CDD|213355 cd12821, EcCorA_ZntB-like, Escherichia coli CorA-Salmonella typhimurium ZntB_like family | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 376 | |||
| KOG2662 | 414 | consensus Magnesium transporters: CorA family [Ino | 100.0 | |
| COG0598 | 322 | CorA Mg2+ and Co2+ transporters [Inorganic ion tra | 100.0 | |
| TIGR00383 | 318 | corA magnesium Mg(2+) and cobalt Co(2+) transport | 100.0 | |
| PRK09546 | 324 | zntB zinc transporter; Reviewed | 100.0 | |
| PRK11085 | 316 | magnesium/nickel/cobalt transporter CorA; Provisio | 99.96 | |
| PF01544 | 292 | CorA: CorA-like Mg2+ transporter protein; InterPro | 99.95 |
| >KOG2662 consensus Magnesium transporters: CorA family [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-79 Score=590.38 Aligned_cols=355 Identities=61% Similarity=0.865 Sum_probs=317.6
Q ss_pred cCccchhhhcccccceeEEEeccCCcccccchhhHHhhhhhcccccccccccCCCCCcccccccceEEeecchhhhhhcc
Q 045110 10 AVDQSSLKKKTAVSSSWILLDREAQSTTLDVDKHVIMRRVQIHARDLRILDPMLNYPSTILGREKVIVLNLEHIKAIITA 89 (376)
Q Consensus 10 ~~~~~~~~~~~~~~~~w~~id~~g~~~~~~~~k~~l~~~~~L~~RDlr~ld~~~~~~~~I~~R~~~Ilvnle~i~~II~~ 89 (376)
+.+.++.++++.++++|++||.+|+++..+++|+.|+++.||+|||||++||+++|+++|+.||+|||+|+|||||||++
T Consensus 51 ~~~~~~~~~~~~~~~sw~~~D~tGn~~~~e~dK~~i~~r~~L~aRDLR~ldp~~~~~ssIl~RE~aIVlNLe~IKAIIta 130 (414)
T KOG2662|consen 51 IDSSSVSKKSGSGSRSWTRFDATGNSTVLEVDKYTIMKRVGLPARDLRKLDPSLSYPSSILGRENAIVLNLEHIKAIITA 130 (414)
T ss_pred ccCcccccccCCcceEEEEEcCCCCeeeccccHHHHHHHcCCChhhhhhccccccCccccccccceEEeehhhhheeeeh
Confidence 34555888899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCcchhHHHHHhhhcCCCCCc--cCCCCcccCCCCccCcch-------hhhhhhhhhhhccccccccccc
Q 045110 90 DEVLLRDPMDDNVIPIVEQLQRRLASDYPIS--QGQGEEEDNHPGVRNNFE-------TEAICSFLDARTRELETDAYPA 160 (376)
Q Consensus 90 d~vl~f~~~~~~~~~f~~~L~~rL~~~~~~~--~~~~~~~~~~~~~~LpfE-------Leav~~~l~~~~~~Le~~~~~~ 160 (376)
|+|++|++.++ +.++.+++++|+...+... |.++++. ..+.+||| |+++|+.|++++.+||..++++
T Consensus 131 eeVll~d~~~~-v~~~~~el~~~l~~~~~~~~~q~s~~~~---~~~~lPFEFrALE~aLe~~~s~L~~~~~~Le~~~~~~ 206 (414)
T KOG2662|consen 131 DEVLLLDSLDP-VIPYNEELQRRLPVELESRGNQLSSDGG---SKDELPFEFRALEVALEAACSFLDSRLSELETEAYPL 206 (414)
T ss_pred hheeEeccccc-cchHHHHHHHHhcccccccccccCCCCC---CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999877 8899999999998765421 1111111 23799999 6678999999999999999999
Q ss_pred hHHHhhhhcccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhHHhhhhccccCCCCCCCCCcccccCCCccc
Q 045110 161 LDELTSKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMADLYLSRKLAVASSPVSGSGAPHWFLNSPTIGS 240 (376)
Q Consensus 161 ld~L~~~~~~~~L~~l~~lK~~L~~l~~~v~~vre~l~~lL~dd~dm~~m~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (376)
||+|+.++++.+|++|+.+|++|++|.++|+++||+|++|||||+||++||||+|+.+.++ +.|.|..|+..+
T Consensus 207 LdeLt~~is~~nL~~lr~~k~~Lt~l~~rvqkvRDeLe~LLddd~Dma~mYLT~K~~~~~~-------~~~~~~sp~~~~ 279 (414)
T KOG2662|consen 207 LDELTNKISTLNLERLRILKKRLTELTSRVQKVRDELEELLDDDDDMAEMYLTRKLAQASS-------PESAPTSPTIKA 279 (414)
T ss_pred HHHHhhhhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhHHhhhccc-------cccCCCCccccC
Confidence 9999999999999999999999999999999999999999999999999999999876653 456666677766
Q ss_pred ccccccccccceeecCcCCHHHHHHHHHHHHhhhcccchhhhhhhhhhcCcccceeeeccccccceeEEEEEeeccceeh
Q 045110 241 KISRTISRGSMETTQEENDVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLCSGTVCL 320 (376)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~eelE~LLE~y~~~~~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~m~~~l~Lti~t~i~ 320 (376)
..+++++....+....++++||+|||||+||+|+|++.+++++++++|++|||+++++||++||++|+++++||+.|+++
T Consensus 280 ~~~r~~~~~~~s~~~~~dd~eElEMLLEaYf~qiD~~~nk~~~Lre~IddTEd~InI~LDs~RN~LiqleL~Lt~gT~~~ 359 (414)
T KOG2662|consen 280 GISRAKSNRASSTVRGEDDVEELEMLLEAYFMQIDSTLNKLESLREYIDDTEDIINIQLDSNRNELIQLELLLTIGTFCL 359 (414)
T ss_pred CccchhhcccchhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccchhHHHHHHHHHHHHHHHH
Confidence 66654322222222238899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhccCcceeeecCCceEEEEeeeehhHHHHHHHHHHHHHhhhccCCCC
Q 045110 321 SVYSLVAAIFGMNIPYTWKTGHGYVFKWVVVITGIVCALLFSIIIFYARHKGLVGS 376 (376)
Q Consensus 321 ~~~t~IaGifGMN~~~~pe~~~~~gf~~v~~~~~~~~~~i~~~~~~~fkrk~wl~~ 376 (376)
+.+++|||+||||+++.+|+ .+|+|+||++++.++|+++|++.++|+|+||.++.
T Consensus 360 s~~~~va~ifGMNl~~~l~~-~~~~F~~vv~~~~~~~~~lf~~i~~~~k~krL~~~ 414 (414)
T KOG2662|consen 360 SVFSVVAGIFGMNLPSSLEE-DHYAFKWVVGITFTLCIVLFVVILGYAKLKRLLGL 414 (414)
T ss_pred HHHHHHHHHhcCCccchhcc-CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhhcCC
Confidence 99999999999999999998 78999999999999999999999999999998763
|
|
| >COG0598 CorA Mg2+ and Co2+ transporters [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR00383 corA magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) | Back alignment and domain information |
|---|
| >PRK09546 zntB zinc transporter; Reviewed | Back alignment and domain information |
|---|
| >PRK11085 magnesium/nickel/cobalt transporter CorA; Provisional | Back alignment and domain information |
|---|
| >PF01544 CorA: CorA-like Mg2+ transporter protein; InterPro: IPR002523 The CorA transport system is the primary Mg2+ influx system of Salmonella typhimurium and Escherichia coli [, ] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 376 | |||
| 3rkg_A | 261 | Magnesium transporter MRS2, mitochondrial; matrix | 2e-65 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-05 |
| >3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae} Length = 261 | Back alignment and structure |
|---|
Score = 208 bits (529), Expect = 2e-65
Identities = 62/298 (20%), Positives = 121/298 (40%), Gaps = 48/298 (16%)
Query: 14 SSLKKKTAVSSSWILLDR--EAQSTTLDVDKHVIMRRVQIHARDLRILD-PMLNYPSTIL 70
+ ++ S + + S + K + + RDLR +D ++ TI+
Sbjct: 7 KPISASDSLFISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIM 66
Query: 71 GREKVIVLNLEHIKAIITADEVLLRDPMDDNVIPIVEQLQRRLASDYPISQGQGEEEDNH 130
+ IV+NL HIKA+I D+V + D + + + L L S ++ + ++
Sbjct: 67 CKPNCIVINLLHIKALIERDKVYVFDTTNPSAAAKLSVLMYDLESKLSSTKNNSQFYEHR 126
Query: 131 PGVRNNFET--EAICSFLDARTRELETDAYPALDELTSKISSRNLDRVRKLKSAMTRLTN 188
E+ + S L+ + L++L ++++ L + +T
Sbjct: 127 A-----LESIFINVMSALETDFKLHSQICIQILNDLENEVNRLKLRHLLIKSKDLTLFYQ 181
Query: 189 RVQKVRDELEQLLDDDDDMADLYLSRKLAVASSPVSGSGAPHWFLNSPTIGSKISRTISR 248
+ +RD L++LL++DDD+A++YL
Sbjct: 182 KTLLIRDLLDELLENDDDLANMYL------------------------------------ 205
Query: 249 GSMETTQEENDVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQL 306
+++ +LEML+E Y+ Q D + + +L + I TE+ +NI LD +RN L
Sbjct: 206 --TVKKSPKDNFSDLEMLIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANRNSL 261
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| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 376 | |||
| 3rkg_A | 261 | Magnesium transporter MRS2, mitochondrial; matrix | 100.0 | |
| 2iub_A | 363 | CORA, divalent cation transport-related protein; m | 100.0 | |
| 4ev6_A | 339 | Magnesium transport protein CORA; membrane protein | 100.0 | |
| 4egw_A | 280 | Magnesium transport protein CORA; magnesium transp | 99.69 | |
| 3nvo_A | 264 | Zinc transport protein ZNTB; alpha-beta-alpha sand | 99.52 | |
| 3ck6_A | 252 | Putative membrane transport protein; APC91421.1, Z | 99.46 | |
| 2bbh_A | 269 | Divalent cation transport-related protein; transpo | 99.35 | |
| 2hn1_A | 266 | CORA, magnesium and cobalt transporter; integral m | 99.32 |
| >3rkg_A Magnesium transporter MRS2, mitochondrial; matrix located domain, hydrophobic GATE magnesium binding site, metal transport; 1.28A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-51 Score=386.56 Aligned_cols=235 Identities=27% Similarity=0.426 Sum_probs=213.7
Q ss_pred ccccceeEEEeccCCccccc--chhhHHhhhhhcccccccccccCC-CCCcccccccceEEeecchhhhhhccccccccC
Q 045110 20 TAVSSSWILLDREAQSTTLD--VDKHVIMRRVQIHARDLRILDPML-NYPSTILGREKVIVLNLEHIKAIITADEVLLRD 96 (376)
Q Consensus 20 ~~~~~~w~~id~~g~~~~~~--~~k~~l~~~~~L~~RDlr~ld~~~-~~~~~I~~R~~~Ilvnle~i~~II~~d~vl~f~ 96 (376)
+....+|++||..|+++.++ ++|++|++++||+|||||+|||.+ +++|+|++|++|||||++||||||++|+|++|+
T Consensus 13 ~~~~~~ct~fD~~G~~~~~~~~~~K~~l~~~~~L~~RDLR~ld~~~~~~~PsIl~R~~aIlvnL~~irAII~~d~Vllfd 92 (261)
T 3rkg_A 13 DSLFISCTVFNSKGNIISMSEKFPKWSFLTEHSLFPRDLRKIDNSSIDIIPTIMCKPNCIVINLLHIKALIERDKVYVFD 92 (261)
T ss_dssp GGGEEEEEEECTTSCEEEEEEEEEHHHHHHHTTCCGGGGGGTSSCCSSCCCEEEECSSCEEEEETTEEEEECSSCEEEEC
T ss_pred CCceEEEEEECCCCCEEEecccccHHHHHHHcCCChhhHHHhcccccCCCceEEecCCeEEEechhceEEEEcceEEEEc
Confidence 33478999999999999986 999999999999999999999985 688899999999999999999999999999999
Q ss_pred CCCCCcc----hhHHHHHhhhcCCCCCccCCCCcccCCCCccCcch---hh----hhhhhhhhhccccccccccchHHHh
Q 045110 97 PMDDNVI----PIVEQLQRRLASDYPISQGQGEEEDNHPGVRNNFE---TE----AICSFLDARTRELETDAYPALDELT 165 (376)
Q Consensus 97 ~~~~~~~----~f~~~L~~rL~~~~~~~~~~~~~~~~~~~~~LpfE---Le----av~~~l~~~~~~Le~~~~~~ld~L~ 165 (376)
+.++.+. .|+.+++.|+..+. .+.+||| || ++|+.|++++..+|..+.++|++|.
T Consensus 93 ~~~~~~~~~~~~f~~~l~~~l~~~~--------------~~~lPFEfraLEa~L~~v~~~Le~e~~~l~~~~~~~L~~L~ 158 (261)
T 3rkg_A 93 TTNPSAAAKLSVLMYDLESKLSSTK--------------NNSQFYEHRALESIFINVMSALETDFKLHSQICIQILNDLE 158 (261)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHCSS--------------CCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhhhHHHHHHHHHHHhccCC--------------CCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8875443 48899999997642 2589999 55 4689999999999999999999999
Q ss_pred hhhcccchhHHHhhHHHHHHHHHHHHHHHHHHHhhcCCCcchhhhHHhhhhccccCCCCCCCCCcccccCCCcccccccc
Q 045110 166 SKISSRNLDRVRKLKSAMTRLTNRVQKVRDELEQLLDDDDDMADLYLSRKLAVASSPVSGSGAPHWFLNSPTIGSKISRT 245 (376)
Q Consensus 166 ~~~~~~~L~~l~~lK~~L~~l~~~v~~vre~l~~lL~dd~dm~~m~Lt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (376)
+++++..|++|+..|++|+.+.++++.+|++|+++|++|+||+.||||++..
T Consensus 159 ~~i~~~~L~~Ll~~~k~L~~~~~kv~~vr~~leelLddDeDm~~myLT~k~~---------------------------- 210 (261)
T 3rkg_A 159 NEVNRLKLRHLLIKSKDLTLFYQKTLLIRDLLDELLENDDDLANMYLTVKKS---------------------------- 210 (261)
T ss_dssp HSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHTCCSSCCC----------------------------
T ss_pred hcCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHcCHHHHHHhhccCCCC----------------------------
Confidence 9999999999999999999999999999999999999999999999999742
Q ss_pred cccccceeecCcCCHHHHHHHHHHHHhhhcccchhhhhhhhhhcCcccceeeeccccccce
Q 045110 246 ISRGSMETTQEENDVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQL 306 (376)
Q Consensus 246 ~~~~~~~~~~~~~~~eelE~LLE~y~~~~~~~~~~~~~l~~~i~~~~~~~~~~l~~~~N~~ 306 (376)
..++|+|+|||||+||+|+|+++++++.++++|++|||++++.||++||++
T Consensus 211 ----------~~~d~eElEmLLE~Y~~q~d~~~~~~~~L~~~I~~TEe~i~i~LD~~RN~L 261 (261)
T 3rkg_A 211 ----------PKDNFSDLEMLIETYYTQCDEYVQQSESLIQDIKSTEEIVNIILDANRNSL 261 (261)
T ss_dssp ----------TTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred ----------CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCC
Confidence 256889999999999999999999999999999999999999999999985
|
| >2iub_A CORA, divalent cation transport-related protein; membrane protein, ION transporter; 2.9A {Thermotoga maritima} SCOP: d.328.1.1 f.17.3.1 PDB: 2hn2_A 2bbj_A | Back alignment and structure |
|---|
| >4ev6_A Magnesium transport protein CORA; membrane protein, ION transporter, metal TR; HET: UMQ; 3.20A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >4egw_A Magnesium transport protein CORA; magnesium transporter, magnesium binding, metal transp; 2.50A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
| >3nvo_A Zinc transport protein ZNTB; alpha-beta-alpha sandwich, zinc efflux system, membrane, TRA protein; 2.30A {Salmonella enterica} PDB: 3nwi_A | Back alignment and structure |
|---|
| >3ck6_A Putative membrane transport protein; APC91421.1, ZNTB, cytoplasmic domain, PSI-2, protein structure initiative; HET: MSE; 1.90A {Vibrio parahaemolyticus rimd 2210633} PDB: 3bhc_A* | Back alignment and structure |
|---|
| >2bbh_A Divalent cation transport-related protein; transporter, Mg, membrane, structural genomics, structural G consortium, SGC; HET: DMU; 1.85A {Thermotoga maritima} SCOP: d.328.1.1 | Back alignment and structure |
|---|
| >2hn1_A CORA, magnesium and cobalt transporter; integral membrane protein fragment, metal transporter protei divalent cations, metal transport; 2.90A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 376 | ||||
| d2iuba2 | 64 | f.17.3.1 (A:286-349) Magnesium transport protein C | 9e-05 |
| >d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]} Length = 64 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Transmembrane helix hairpin superfamily: Magnesium transport protein CorA, transmembrane region family: Magnesium transport protein CorA, transmembrane region domain: Magnesium transport protein CorA species: Thermotoga maritima [TaxId: 2336]
Score = 38.1 bits (89), Expect = 9e-05
Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 4/55 (7%)
Query: 317 TVCLSVYSLVAAIFGMNIPYTWKTGHGYVFKWVVVITGIVCALLFSIIIFYARHK 371
+ +A I+GMN Y + + + V+ + G++ ++ Y + K
Sbjct: 13 ATIFMPLTFIAGIYGMNFEYMPELRWKWGYPVVLAVMGVIAVIMV----VYFKKK 63
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 376 | |||
| d2iuba2 | 64 | Magnesium transport protein CorA {Thermotoga marit | 99.69 | |
| d2bbha1 | 232 | Magnesium transport protein CorA, soluble domain { | 99.52 |
| >d2iuba2 f.17.3.1 (A:286-349) Magnesium transport protein CorA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Transmembrane helix hairpin superfamily: Magnesium transport protein CorA, transmembrane region family: Magnesium transport protein CorA, transmembrane region domain: Magnesium transport protein CorA species: Thermotoga maritima [TaxId: 2336]
Probab=99.69 E-value=7.5e-20 Score=134.48 Aligned_cols=64 Identities=20% Similarity=0.382 Sum_probs=42.6
Q ss_pred cccceeEEEEEeeccceehhHHHHHHHHhccCcceeeecCCceEEEEeeeehhHHHHHHHHHHHHHhhhcc
Q 045110 302 HRNQLIQLELFLCSGTVCLSVYSLVAAIFGMNIPYTWKTGHGYVFKWVVVITGIVCALLFSIIIFYARHKG 372 (376)
Q Consensus 302 ~~N~~m~~~l~Lti~t~i~~~~t~IaGifGMN~~~~pe~~~~~gf~~v~~~~~~~~~~i~~~~~~~fkrk~ 372 (376)
|+|++|| +||++|++|.|+|+|||+||||++++|+.+++|||+++++ +++++.+++++||||||
T Consensus 1 r~N~~mk---~lT~it~iflP~t~i~gifGMN~~~~P~~~~~~~~~~~~~----~~~~~~~~~~~~f~rkk 64 (64)
T d2iuba2 1 KTNEVMK---VLTIIATIFMPLTFIAGIYGMNFEYMPELRWKWGYPVVLA----VMGVIAVIMVVYFKKKK 64 (64)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHHHTTSCC--------------CHHHHH----HHHHHHHHHHTTTTSCC
T ss_pred ChhHHHH---HHHHHHHHHHHHHHHHhhhccCCCCCCCCCccHHHHHHHH----HHHHHHHHHHHHHhccC
Confidence 5799999 6999999999999999999999999999999999987776 33455567889999987
|
| >d2bbha1 d.328.1.1 (A:13-244) Magnesium transport protein CorA, soluble domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
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