Citrus Sinensis ID: 045168

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-----
Protein Sequence
MLFNTKSFSLYLQNLITTYKPHVNPNFTHTHQIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFNEEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKDMEKMALRSEDEEEKLDELMYDEQM
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHHccccccccccccEEEEEEEcccccccccHHHHHHHHHccccHHHHHHHHHHHccccccccHHHHHHHcccccccHHHHHHHHHccccEEEEccccccccccccEEcccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHccccEEEHHHHHHHHHHccccccccccccccccccEEEEccccccccEEEEccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHccccHHHHHHHHHccccEEEEEEccEEEEEEEccccccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHEEHHcccccHHHHHHHHHHHHHHHHHHHHHHHcccccEcHHHHHHHHHHccccccHHHHHHHcccEEEEEEcccccccccccEEcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHcccccEEEEccccccccEEEEEccccHHHHHHHHHHHcHccccccccccccccHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHcccEEEEEcccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHccHHHHcccccccHcHcccHHHHHccccccHHccHHccccccc
Coil and Loop (DISEMBL)
MLFNTKSFSLYLQNLITtykphvnpnfthtHQIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLnepgqviplrYLEKRRERLSLNVKVRTFlnrypglfytyydrikpksdavlflrpsdrLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVkrefgfpndflvklvprypnyfklvgcpgegqsfleleswnpDFAKSVIQLRAEEEakltgipvrpnfnEEMREWVRDWLEldyispyedvsnldqssQEMEKRTVAVFHELLSLsifkripvpilgkfsdeyrfsnafssafTRHSGIFYLSLKGGIKTAMLREAYrhselidrdplLEIKERFVELLEKGKHEWTEQLRLQREEVKKDMEKMALRSEDEEEKLDELMYDEQM
Flexible Loop (DISEMBL)
MLFNTKSFSLYLQNLITTYKPHVNPNFTHTHQIKLISSLKVVWRKDQKLdqaiendkqYKLCARVVKEvlnepgqviplrylekrrerlslnvkvrtflnrypglfytyydrikpksdavlflrPSDRLRDFLEEerkiydnneELLVAKLCKLLMMSKDKVLSVDKLVHVKRefgfpndflvKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEeeakltgipvrpnfneEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELlslsifkripVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRhselidrdplleIKERFVELLekgkhewteqlrlqreevKKDMekmalrsedeeekldelmydeqm
Low Complexity Region (SEG)
MLFNTKSFSLYLQNLITTYKPHVNPNFTHTHQIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFNEEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKDMEKMALRSEDEEEKLDELMYDEQM
Disordered region (IsUnstruct)
*****KSFSLYLQNLITTYKPHVNPNFTHTHQIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFNEEMREWVRDWLELDYISPYEDV************RTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWT*************************************
Disordered Region (DISOPRED)
*************NLITTYKPHVNPNFT**H******SLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPG*VI***YL**RRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVI******************FNEEMREWVRDWLELDYISPYEDVSNL*Q*SQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLE********************************************
Disordered Region (DISEMBL)
MLFNTKSFSLYLQNLITTYKPHVNPNFTHTHQIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFNEEMREWVRDWLELDYISPYEDV**********EKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKDMEKMALRSEDEEEKLDELMYDEQM
Disordered Region (DISPRO)
**FNTKSFSLYLQNLITTYKPHVNPNFTHTHQIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFNEEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEW**************************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLFNTKSFSLYLQNLITTYKPHVNPNFTHTHQIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFNEEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWxxxxxxxxxxxxxxxxxxxxxxxxxxxxLDELMYDEQM
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
449436565	402	PREDICTED: uncharacterized protein LOC10	0.883	0.890	0.760	1e-155
449516768	402	PREDICTED: LOW QUALITY PROTEIN: uncharac	0.883	0.890	0.758	1e-155
225436966	443	PREDICTED: uncharacterized protein LOC10	0.938	0.857	0.701	1e-152
356535836	383	PREDICTED: uncharacterized protein LOC10	0.891	0.942	0.717	1e-151
357440801	393	hypothetical protein MTR_1g072550 [Medic	0.918	0.946	0.693	1e-151
224068795	361	predicted protein [Populus trichocarpa]	0.866	0.972	0.745	1e-150
21593983	404	unknown [Arabidopsis thaliana]	0.955	0.957	0.671	1e-149
15229379	404	ubiquitin carboxyl-terminal hydrolase-li	0.955	0.957	0.669	1e-149
297817650	403	hypothetical protein ARALYDRAFT_486812 [	0.901	0.905	0.699	1e-147
358347284	391	hypothetical protein MTR_097s0035 [Medic	0.866	0.897	0.720	1e-146

>gi|449436565|ref|XP_004136063.1| PREDICTED: uncharacterized protein LOC101217486 [Cucumis sativus]

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 280/368 (76%), Positives = 312/368 (84%), Gaps = 10/368 (2%)

Query: 32  QIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSL 91
           Q + ISSLKVVWRKD +LD+AIENDK+YKLCARVVKEVLNEPGQVIPLRYLEKRRERL L
Sbjct: 30  QFRPISSLKVVWRKDYRLDEAIENDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRL 89

Query: 92  NVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKL 151
           NV V+ FL   PGLF TYYDRIKPKS+ VLFLR SDRLR FLEEE++I   NEEL+V+KL
Sbjct: 90  NVSVKAFLGFNPGLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRIMMENEELIVSKL 149

Query: 152 CKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESW 211
           CKLLMMSKDK+LSVDKLVHVKR+FGFPNDFLV LVP+YP YF++VGCPGEG+SFL+L S 
Sbjct: 150 CKLLMMSKDKMLSVDKLVHVKRDFGFPNDFLVNLVPKYPEYFQIVGCPGEGKSFLQLVSR 209

Query: 212 NPDFAKSVIQLRAEEEAKLTGIPVRPNFN----------EEMREWVRDWLELDYISPYED 261
           NPDFAKSVI+ RAE+E+  TGI +RPNF+          +EMREWVRDWLELDYISPYED
Sbjct: 210 NPDFAKSVIERRAEDESISTGIRMRPNFDYKLPPGFILRKEMREWVRDWLELDYISPYED 269

Query: 262 VSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIF 321
           VS+L QSS EMEKRTV VFHELLSLS+FKRIPVPILGKF  EYRFSNAFSS FTRHSGIF
Sbjct: 270 VSHLAQSSPEMEKRTVGVFHELLSLSLFKRIPVPILGKFGGEYRFSNAFSSVFTRHSGIF 329

Query: 322 YLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKD 381
           YLSLKGGI+TAMLREAY   +LID DPLLEIK +FVELLE+G  E  EQ R Q  E++KD
Sbjct: 330 YLSLKGGIETAMLREAYEGGQLIDCDPLLEIKNKFVELLEQGWRERAEQRRQQANELRKD 389

Query: 382 MEKMALRS 389
           ME M  R+
Sbjct: 390 MEFMCARA 397

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449516768|ref|XP_004165418.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101227452 [Cucumis sativus]

 Score =  552 bits (1423), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 279/368 (75%), Positives = 311/368 (84%), Gaps = 10/368 (2%)

Query: 32  QIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSL 91
           Q + ISSLKVVWRKD +LD+AIENDK+YKLCARVVKEVLNEPGQVIPLRYLEKRRERL L
Sbjct: 30  QFRPISSLKVVWRKDYRLDEAIENDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRL 89

Query: 92  NVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKL 151
           NV V+ FL   PGLF TYYDRIKPKS+ VLFLR SDRLR FLEEE++I   NEEL+V+KL
Sbjct: 90  NVSVKAFLGFNPGLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRIMMENEELIVSKL 149

Query: 152 CKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESW 211
           CKLLMMSKDK+LSVDKLVHVKR+FGFPNDF V LVP+YP YF++VGCPGEG+SFL+L S 
Sbjct: 150 CKLLMMSKDKMLSVDKLVHVKRDFGFPNDFXVNLVPKYPEYFQIVGCPGEGKSFLQLVSR 209

Query: 212 NPDFAKSVIQLRAEEEAKLTGIPVRPNFN----------EEMREWVRDWLELDYISPYED 261
           NPDFAKSVI+ RAE+E+  TGI +RPNF+          +EMREWVRDWLELDYISPYED
Sbjct: 210 NPDFAKSVIERRAEDESISTGIRMRPNFDYKLPPGFILRKEMREWVRDWLELDYISPYED 269

Query: 262 VSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIF 321
           VS+L QSS EMEKRTV VFHELLSLS+FKRIPVPILGKF  EYRFSNAFSS FTRHSGIF
Sbjct: 270 VSHLAQSSPEMEKRTVGVFHELLSLSLFKRIPVPILGKFGGEYRFSNAFSSVFTRHSGIF 329

Query: 322 YLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKD 381
           YLSLKGGI+TAMLREAY   +LID DPLLEIK +FVELLE+G  E  EQ R Q  E++KD
Sbjct: 330 YLSLKGGIETAMLREAYEGGQLIDCDPLLEIKXKFVELLEQGWRERAEQRRQQANELRKD 389

Query: 382 MEKMALRS 389
           ME M  R+
Sbjct: 390 MEFMCARA 397

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436966|ref|XP_002271895.1| PREDICTED: uncharacterized protein LOC100256232 [Vitis vinifera]

 Score =  543 bits (1400), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 279/398 (70%), Positives = 327/398 (82%), Gaps = 18/398 (4%)

Query: 1   MLFNTKSFSLYLQNLITTYKPHVNPNFTHTHQIKLISSLKVVWRKDQKLDQAIENDKQYK 60
           MLF + S +     +    K  V   FT +     ISSL+VVWRKD KLDQAIENDKQ++
Sbjct: 41  MLFKSPSIN---SQIFINCKVRVWTQFTAS-----ISSLQVVWRKDHKLDQAIENDKQWR 92

Query: 61  LCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAV 120
           LCARVVKEVLNEPGQVIPLRYLEKRRERL L++K++TFL++ PGLF TY DRIKPKS+ V
Sbjct: 93  LCARVVKEVLNEPGQVIPLRYLEKRRERLRLSIKIKTFLSQNPGLFDTYLDRIKPKSEPV 152

Query: 121 LFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPND 180
            FLR SD LR FLEEE++I   NE L+VAKLCKLLM+SKDKV+S DKLVHVKREFGFPND
Sbjct: 153 DFLRASDGLRRFLEEEKRIIHENEPLIVAKLCKLLMISKDKVISADKLVHVKREFGFPND 212

Query: 181 FLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFN 240
           FLV LVP++P+YF+L G PGEG+SFLEL SWNP+FAKSVI+ RAEEE + TGI VRP+FN
Sbjct: 213 FLVNLVPKFPDYFRLSGSPGEGKSFLELVSWNPEFAKSVIERRAEEEERATGIRVRPSFN 272

Query: 241 ----------EEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFK 290
                     +EMREW+RDW+ELDYISPY DVS+LDQ+S EMEKRTV VFHELLSLS+FK
Sbjct: 273 VKLPHGFFLRKEMREWIRDWMELDYISPYADVSHLDQASPEMEKRTVGVFHELLSLSLFK 332

Query: 291 RIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLL 350
           R+PVPILGKF +EYRFSNAFSS FTRHSGIFYLSLKGGI+TAMLREAY+  ELID+DPL+
Sbjct: 333 RVPVPILGKFREEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKDDELIDQDPLV 392

Query: 351 EIKERFVELLEKGKHEWTEQLRLQREEVKKDMEKMALR 388
           EIK+RF++LL +G  E  EQ RLQ+E V+KDME M++R
Sbjct: 393 EIKDRFLDLLAEGHRESAEQSRLQKEAVQKDMEMMSMR 430

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356535836|ref|XP_003536449.1| PREDICTED: uncharacterized protein LOC100778092 [Glycine max]

 Score =  540 bits (1390), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 267/372 (71%), Positives = 316/372 (84%), Gaps = 11/372 (2%)

Query: 28  THTH-QIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRR 86
           T +H + + ISSLKVVWRKD +LD+AIE DK+YK CARVVKEVLNEPGQVIPLRYLEKRR
Sbjct: 9   TLSHLKARSISSLKVVWRKDPELDRAIELDKRYKQCARVVKEVLNEPGQVIPLRYLEKRR 68

Query: 87  ERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEEL 146
           ER+ L +K  TFLN+ PGLF  YYDRIKPK++ V FLRP+DRLR FL +ER+++ +NE  
Sbjct: 69  ERMRLKLKAETFLNQNPGLFDVYYDRIKPKTEPVRFLRPTDRLRRFLHQERRVFLDNEPF 128

Query: 147 LVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFL 206
           +V+KLCKLLMMSK+KV+S DKL+HVKREFGFPNDFLV LVPRYP YF+L G PGEG+SFL
Sbjct: 129 IVSKLCKLLMMSKNKVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGSPGEGKSFL 188

Query: 207 ELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFN----------EEMREWVRDWLELDYI 256
           EL +WNP+FAKSVI+ RAEEE++  GI VRP+FN          +EMREW+RDW+ELDY+
Sbjct: 189 ELVNWNPEFAKSVIEGRAEEESERLGIRVRPSFNVQLPRGFVLKKEMREWIRDWMELDYV 248

Query: 257 SPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTR 316
           SPYEDVS+LDQ+S+EMEKR+V VFHELLSLS+ KRIPVPILGKF DEYRFSNAFS+ FTR
Sbjct: 249 SPYEDVSHLDQASREMEKRSVGVFHELLSLSLHKRIPVPILGKFCDEYRFSNAFSTTFTR 308

Query: 317 HSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQRE 376
           HSGIFYLSLKGGI+TAMLREAYR  ELIDRDPLL IK+ FVELLE G  +  EQLRL++E
Sbjct: 309 HSGIFYLSLKGGIETAMLREAYRGDELIDRDPLLRIKDMFVELLEDGWRQRAEQLRLKQE 368

Query: 377 EVKKDMEKMALR 388
           +VK+DME +A +
Sbjct: 369 KVKEDMELLATK 380

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357440801|ref|XP_003590678.1| hypothetical protein MTR_1g072550 [Medicago truncatula] gi|355479726|gb|AES60929.1| hypothetical protein MTR_1g072550 [Medicago truncatula]

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 265/382 (69%), Positives = 319/382 (83%), Gaps = 10/382 (2%)

Query: 17  TTYKPHVNPNFTHTHQIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQV 76
           T +  ++N N       +LISSLKVVWRKDQ LDQAIE DK++K CARVVKEVLNEPGQV
Sbjct: 9   TFFCYYLNNNLNIHVHTRLISSLKVVWRKDQSLDQAIEQDKRFKQCARVVKEVLNEPGQV 68

Query: 77  IPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEE 136
           IPLRYLEKRR+R+ L VK+ TFLN+ P LF  YYDRIKPK++ V FLR SD L  FL+EE
Sbjct: 69  IPLRYLEKRRQRMRLKVKIDTFLNQNPFLFDVYYDRIKPKTEPVKFLRVSDHLLQFLQEE 128

Query: 137 RKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLV 196
           ++IY  NE L+V+KLCKLLMMSKDK++S DKL+HVKREFGFPNDFLV LVPRYP YF+L 
Sbjct: 129 KRIYKENEPLIVSKLCKLLMMSKDKIVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLT 188

Query: 197 GCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFN----------EEMREW 246
           G PGEG+SFLEL +WNP+FAKSVI+ RAEEE++ TGI VRP+FN          +EMREW
Sbjct: 189 GLPGEGKSFLELVNWNPEFAKSVIERRAEEESRATGIRVRPSFNVKLPPGFVLKKEMREW 248

Query: 247 VRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRF 306
           +RDW+ELDY+SPYEDVS+L+Q+S+EMEKR+V VFHELLSLS++KR+PVPILGKF DEYRF
Sbjct: 249 IRDWMELDYVSPYEDVSHLEQASREMEKRSVGVFHELLSLSLYKRVPVPILGKFCDEYRF 308

Query: 307 SNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHE 366
           SNAFSSAFTRHSGIFY+SLKGGI+TAMLREAY   +LID DPLL+IK+RF ELL++G   
Sbjct: 309 SNAFSSAFTRHSGIFYMSLKGGIETAMLREAYDGDKLIDIDPLLQIKDRFAELLKEGWRL 368

Query: 367 WTEQLRLQREEVKKDMEKMALR 388
             EQL+L++E++K+DME +A R
Sbjct: 369 RAEQLKLKQEKIKQDMELVATR 390

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068795|ref|XP_002302827.1| predicted protein [Populus trichocarpa] gi|222844553|gb|EEE82100.1| predicted protein [Populus trichocarpa]

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/361 (74%), Positives = 305/361 (84%), Gaps = 10/361 (2%)

Query: 36  ISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKV 95
           ISSLKVVWR+D +LD AIE DK YK+C++VVKEVLNEPGQVIPLRYLE RRERL LNV++
Sbjct: 1   ISSLKVVWRRDPQLDHAIERDKPYKICSKVVKEVLNEPGQVIPLRYLENRRERLRLNVRI 60

Query: 96  RTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLL 155
            TFLN+ P LF  Y DRIKPKS+ V F+R S RLR+FLEEE++I   NE  +V+KLCKLL
Sbjct: 61  STFLNKNPALFDVYQDRIKPKSEPVRFVRVSHRLRNFLEEEKRIVLENEGWIVSKLCKLL 120

Query: 156 MMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDF 215
           MM+KDKVLSVDKLVHVKREFGFPNDFLV LVP YPNYF+L+G P EG+SFLEL  WNP+F
Sbjct: 121 MMAKDKVLSVDKLVHVKREFGFPNDFLVNLVPNYPNYFRLIGPPEEGKSFLELVEWNPEF 180

Query: 216 AKSVIQLRAEEEAKLTGIPVRPNF----------NEEMREWVRDWLELDYISPYEDVSNL 265
           AKS+I+ RAE+E  LTGI +RPNF           +EMREW+RDWLELDYISPY DVS+L
Sbjct: 181 AKSIIEQRAEDEFGLTGIRIRPNFYYKLPPGFFLRKEMREWIRDWLELDYISPYVDVSHL 240

Query: 266 DQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSL 325
           DQ+SQEMEKRTV VFHELLSLS+FKRIPVPILGKFSDEYRFSN FSS FTRH GIFY+SL
Sbjct: 241 DQASQEMEKRTVGVFHELLSLSLFKRIPVPILGKFSDEYRFSNTFSSVFTRHPGIFYMSL 300

Query: 326 KGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKDMEKM 385
           KGGIKTAMLREAY+ SELI RDPLLEIK++FV+LLE+G  E  EQLRLQREEVKK+   M
Sbjct: 301 KGGIKTAMLREAYKDSELIQRDPLLEIKDKFVQLLEEGWQERQEQLRLQREEVKKNRVMM 360

Query: 386 A 386
           A
Sbjct: 361 A 361

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593983|gb|AAM65910.1| unknown [Arabidopsis thaliana]

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 270/402 (67%), Positives = 322/402 (80%), Gaps = 15/402 (3%)

Query: 10  LYLQNLITTYKPHVNPNFTHTH----QIKLISSLKVVWRKDQKLDQAIENDKQYKLCARV 65
           + L+NL  +Y+   +      H    QI+ ISSLKVVW+KD +LD+AIE DK+YKLCARV
Sbjct: 1   MVLRNLTISYEIIKSLKHAKEHSLGIQIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARV 60

Query: 66  VKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRP 125
           VKEVLNEPGQVIPLRYLEKRRERL L  K ++F+   P LF  YYDRIKPKSD V FLRP
Sbjct: 61  VKEVLNEPGQVIPLRYLEKRRERLRLTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRP 120

Query: 126 SDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKL 185
           + RLR FL+EE++IY  NE LLV+KLCKLLMM+KDKV+S DKLVHVKR+FGFPNDFL+KL
Sbjct: 121 TPRLRAFLDEEQRIYSENEPLLVSKLCKLLMMAKDKVISADKLVHVKRDFGFPNDFLMKL 180

Query: 186 VPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFN----- 240
           V +YPNYF+L G P EG+SFLEL SWNPDFAKS I+LRAE+E   TG+ +RPN+N     
Sbjct: 181 VQKYPNYFRLTGLPEEGKSFLELVSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPS 240

Query: 241 -----EEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVP 295
                +EMREW RDWLE DYISPYEDVS+LDQ+S+EMEKRTV V HELLSLS+ KR+PVP
Sbjct: 241 GFFLRKEMREWTRDWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVP 300

Query: 296 ILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKER 355
            LGKF DE+RFSNAFSS FTRHSGIFYLSLKGGIKTA+LREAY+  EL+DRDPLL IK++
Sbjct: 301 TLGKFCDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDK 360

Query: 356 FVELLEKGKHEWTEQLRLQREEVKKDMEKM-ALRSEDEEEKL 396
           F+ LLE+G  E  ++L+LQRE+V+KD E M A +S +  E+L
Sbjct: 361 FLRLLEEGWQERKDRLKLQREQVQKDREMMLAAKSNEPIERL 402

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15229379|ref|NP_191868.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gi|7573438|emb|CAB87754.1| putative protein [Arabidopsis thaliana] gi|20466812|gb|AAM20723.1| putative protein [Arabidopsis thaliana] gi|23198214|gb|AAN15634.1| putative protein [Arabidopsis thaliana] gi|332646913|gb|AEE80434.1| ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana]

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 269/402 (66%), Positives = 322/402 (80%), Gaps = 15/402 (3%)

Query: 10  LYLQNLITTYKPHVNPNFTHTH----QIKLISSLKVVWRKDQKLDQAIENDKQYKLCARV 65
           + L+NL  +Y+   +      H    QI+ ISSLKVVW+KD +LD+AIE DK+YKLCARV
Sbjct: 1   MVLRNLTISYEIIKSLKHAKEHSLGIQIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARV 60

Query: 66  VKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRP 125
           VKEVLNEPGQVIPLRYLEKRRERL L  K ++F+   P LF  YYDRIKPKSD V FLRP
Sbjct: 61  VKEVLNEPGQVIPLRYLEKRRERLRLTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRP 120

Query: 126 SDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKL 185
           + RLR FL+EE++IY  NE LLV+KLC+LLMM+KDKV+S DKLVHVKR+FGFPNDFL+KL
Sbjct: 121 TPRLRAFLDEEQRIYSENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKL 180

Query: 186 VPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIPVRPNFN----- 240
           V +YPNYF+L G P EG+SFLEL SWNPDFAKS I+LRAE+E   TG+ +RPN+N     
Sbjct: 181 VQKYPNYFRLTGLPEEGKSFLELVSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPS 240

Query: 241 -----EEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVP 295
                +EMREW RDWLE DYISPYEDVS+LDQ+S+EMEKRTV V HELLSLS+ KR+PVP
Sbjct: 241 GFFLRKEMREWTRDWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVP 300

Query: 296 ILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKER 355
            LGKF DE+RFSNAFSS FTRHSGIFYLSLKGGIKTA+LREAY+  EL+DRDPLL IK++
Sbjct: 301 TLGKFCDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDK 360

Query: 356 FVELLEKGKHEWTEQLRLQREEVKKDMEKM-ALRSEDEEEKL 396
           F+ LLE+G  E  ++L+LQRE+V+KD E M A +S +  E+L
Sbjct: 361 FLRLLEEGWQERKDRLKLQREQVQKDREMMLAAKSNEPIERL 402

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297817650|ref|XP_002876708.1| hypothetical protein ARALYDRAFT_486812 [Arabidopsis lyrata subsp. lyrata] gi|297322546|gb|EFH52967.1| hypothetical protein ARALYDRAFT_486812 [Arabidopsis lyrata subsp. lyrata]

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 263/376 (69%), Positives = 312/376 (82%), Gaps = 11/376 (2%)

Query: 32  QIKLISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSL 91
           QI+ ISSLKVVW+KD +LD+AIE DK+YKLCARVVKEVLNEPGQVIPLRYLEKRRERL L
Sbjct: 26  QIRSISSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRRERLRL 85

Query: 92  NVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKL 151
             K ++F+   P LF  YYDRIKPKSD V F+RP+ RLR FL+EE++IY  NE L+V+KL
Sbjct: 86  TFKAKSFVEMNPCLFEIYYDRIKPKSDLVQFIRPTPRLRAFLDEEQRIYAENEPLIVSKL 145

Query: 152 CKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESW 211
           CKLLMM+KDKV+S DKLVHVKR+FGFPNDFL+KLV +YPNYF+L G P EG+SFLEL SW
Sbjct: 146 CKLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKSFLELVSW 205

Query: 212 NPDFAKSVIQLRAEEEAKLTGIPVRPNFN----------EEMREWVRDWLELDYISPYED 261
           NPDFAKS I+ RAE+EA  TG+ VRPNFN          +EMREW RDWLE DYISPYED
Sbjct: 206 NPDFAKSKIEQRAEDEALQTGVRVRPNFNVKLPSGFFLRKEMREWTRDWLEQDYISPYED 265

Query: 262 VSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIF 321
           VS+LDQ+S+EMEKRTVAV HELLSLS+ KR+PVP LGKF  E+RFSNAFSS FTRHSGIF
Sbjct: 266 VSHLDQASKEMEKRTVAVVHELLSLSLLKRVPVPTLGKFCHEFRFSNAFSSVFTRHSGIF 325

Query: 322 YLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKD 381
           YLSLKGGIKTA+LREAY+  +L+DRDPLL IK+RF+ LLE+G  E  ++L+ QRE+V+KD
Sbjct: 326 YLSLKGGIKTAVLREAYKDDDLVDRDPLLAIKDRFLSLLEEGWQERKDRLKQQREQVQKD 385

Query: 382 ME-KMALRSEDEEEKL 396
            E  +A +S + +E+L
Sbjct: 386 RELLLATKSNEPKERL 401

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358347284|ref|XP_003637689.1| hypothetical protein MTR_097s0035 [Medicago truncatula] gi|355503624|gb|AES84827.1| hypothetical protein MTR_097s0035 [Medicago truncatula]

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 260/361 (72%), Positives = 303/361 (83%), Gaps = 10/361 (2%)

Query: 36  ISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKV 95
           ISSLKVVWRKD  LDQAIE DK++K C RVVKEVLNEPGQVIPLRYLEKRR+R+ L VK+
Sbjct: 28  ISSLKVVWRKDPSLDQAIEQDKRFKQCFRVVKEVLNEPGQVIPLRYLEKRRQRMRLKVKI 87

Query: 96  RTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLL 155
            TFLN+ P LF  YYDRIKPK+  V FLR SD L  FLEEE++IY  NE L+V+KLCKLL
Sbjct: 88  DTFLNQNPFLFDVYYDRIKPKTKPVKFLRVSDHLLQFLEEEKRIYKENEPLIVSKLCKLL 147

Query: 156 MMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDF 215
           MMSKDKV+S DKL+HVKREFGFPNDFLV LVPRYP YF+L G PGEG+SFLEL +WNP+F
Sbjct: 148 MMSKDKVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGLPGEGKSFLELVNWNPEF 207

Query: 216 AKSVIQLRAEEEAKLTGIPVRPNFN----------EEMREWVRDWLELDYISPYEDVSNL 265
           AKSV++ RAEEE+  TGI VRP+FN          +EMREW+RDW+ELDY+SPYEDVS+ 
Sbjct: 208 AKSVVEKRAEEESSATGIRVRPSFNVKLPPGFVLKKEMREWIRDWMELDYVSPYEDVSHF 267

Query: 266 DQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSL 325
           +QSS+EMEKR+V VFHELLSLS++KRIPVPILGKF DEYRFSNAFSSAFTRHSGIFYLSL
Sbjct: 268 EQSSREMEKRSVGVFHELLSLSLYKRIPVPILGKFCDEYRFSNAFSSAFTRHSGIFYLSL 327

Query: 326 KGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKDMEKM 385
           KGGI+TAMLREAY   +LI  DPLL+IK+RF ELL +G     EQL+L++E++K+DME +
Sbjct: 328 KGGIETAMLREAYEGDKLIHIDPLLQIKDRFAELLNEGWRLRAEQLKLKQEKIKQDMELV 387

Query: 386 A 386
           A
Sbjct: 388 A 388

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	405
TAIR|locus:2042561	415	AT2G31290 [Arabidopsis thalian	0.864	0.843	0.335	1.9e-51
TAIR|locus:4515103321	528	WTF1 "what's this factor?" [Ar	0.856	0.657	0.337	7.3e-43
TAIR|locus:2012981	470	AT1G71850 "AT1G71850" [Arabido	0.846	0.729	0.262	1.5e-33
TAIR|locus:2064940	387	WTF9 "AT2G39120" [Arabidopsis	0.819	0.857	0.280	1.6e-31
TAIR|locus:2166305	494	emb1692 "embryo defective 1692	0.876	0.718	0.286	9e-31
TAIR|locus:504955534	409	RPD1 "ROOT PRIMORDIUM DEFECTIV	0.644	0.638	0.262	7.5e-30
TAIR|locus:2138738	395	AT4G08940 [Arabidopsis thalian	0.767	0.787	0.285	3.9e-28
TAIR|locus:2207380	413	AT1G79120 [Arabidopsis thalian	0.343	0.336	0.356	4.4e-27
TAIR|locus:2009230	390	AT1G06440 [Arabidopsis thalian	0.706	0.733	0.246	2.2e-17

TAIR|locus:2042561 AT2G31290 [Arabidopsis thaliana (taxid:3702)]

 Score = 534 (193.0 bits), Expect = 1.9e-51, P = 1.9e-51
 Identities = 126/376 (33%), Positives = 213/376 (56%)

Query:    42 VW--RKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFL 99
             +W  +KD  L+ A+  +K++ + +R+   +L  P QV  +++L+K+ + L L  K   +L
Sbjct:    25 LWSTKKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWL 84

Query:   100 NRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSK 159
              +YP  F+ Y +     +D   + R +  +   +EEE  + D  E +L  +L KLLM+S 
Sbjct:    85 KKYPCCFHVYLE-----NDEY-YCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSV 138

Query:   160 DKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSF-LELESWNPDFAKS 218
             ++ L+V KL   KR FGFP+D+++++VP+Y + F+LV   G   S  +EL  W P+ A S
Sbjct:   139 NQRLNVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVS 198

Query:   219 VIQLRAEEEAKLTGIPVRPNFNEEMRE-WVRDW---LELD---YISPYEDVSNLDQSSQE 271
              +    E  AK  G    P+F+  +   W + W   +E +   YISPYED  +L + S+E
Sbjct:   199 AV----EAAAKKCGS--EPSFSCSLPSTWTKPWERFMEFNAFPYISPYEDHGDLVEGSKE 252

Query:   272 MEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKT 331
              EKR+V + HELLSL+++K++ +  L  F  E+      +    +H GIFY+  K  + T
Sbjct:   253 SEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVHT 312

Query:   332 AMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKD--ME--KMAL 387
              +LRE Y  SELI +DPL+ +K++F EL+++G +E+  +  L   E K++  +E  K  +
Sbjct:   313 VILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRRYLANLEKKREKGIESLKPVV 372

Query:   388 RSEDEEEKLDELMYDE 403
             R +D     D++  +E
Sbjct:   373 RKKDRNHDRDDVDEEE 388

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:4515103321 WTF1 "what's this factor?" [Arabidopsis thaliana (taxid:3702)]

 Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
 Identities = 126/373 (33%), Positives = 194/373 (52%)

Query:    44 RKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVR--TFLNR 101
             RK+   D  ++ DK+ KL   + K ++++P +++ LR L K R  L L  + R    L +
Sbjct:    79 RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138

Query:   102 YPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDK 161
             YPG+F    + ++  + ++ F   S+  R +L+E R I +  E++LV KL KL+MMS DK
Sbjct:   139 YPGVF----EIVEEGAYSLRFKMTSEAERLYLDEMR-IRNELEDVLVVKLRKLVMMSIDK 193

Query:   162 VLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCP-GEGQSFL----ELESWNPDFA 216
              + ++K+ H+K + G P +F   +  RYP YF++V  P G          EL     + +
Sbjct:   194 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAELS 253

Query:   217 KSVIQLRAEEEAKLTGIPVRPNFNE------------EMREWVRDWLELDYISPYEDVSN 264
             +   + R  EE  L  I   P FN             E R+ +  + ++ YISPY+D S+
Sbjct:   254 EDDNRTRESEERNLI-IDRPPKFNRVKLPRGLNLSKSETRK-ISQFRDMQYISPYKDFSH 311

Query:   265 LDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLS 324
             L   + E EK    V HELLSL+  KR  V  L  F +E+RFS        RH  +FY+S
Sbjct:   312 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 371

Query:   325 LKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKDMEK 384
             LKG   +  LREAYR+SELID+DPL  +KE+   L+   +       R   E  + +++ 
Sbjct:   372 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGREVEIDG 431

Query:   385 MALRSEDEEEKLD 397
                  E+EEE+ D
Sbjct:   432 SDADGEEEEEESD 444

GO:0005576 "extracellular region" evidence=ISM

TAIR|locus:2012981 AT1G71850 "AT1G71850" [Arabidopsis thaliana (taxid:3702)]

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 98/374 (26%), Positives = 187/374 (50%)

Query:    45 KDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRYPG 104
             +D+ LD A+E +K  +    +   + +EP + +P+  +  +++ L + ++   F+  +P 
Sbjct:    33 RDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPLRPIEFIRSFPS 92

Query:   105 LFYTYYDR---IKPKSDAVLFLRPSDRLRDFLEEERKIYDNN--EELLVAKLCKLLMMSK 159
             +F  +      I P     + L P     D   +E+ +Y +   ++ L  +L KLLM+++
Sbjct:    93 VFQEFLPGGIGIHPH----ISLTPEILNHD--ADEQLVYGSETYKQGLADRLLKLLMINR 146

Query:   160 DKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLV-----GCPGEGQSFLELESWNPD 214
                + ++ L  +K + G P D++  +VP +P+YF+++     GC GE    LEL  W+ +
Sbjct:   147 INKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGE----LELVCWSNE 202

Query:   215 FAKSVIQ-----LRAEEEAKLTGIPVRPNFN------EEMREWVRDWLELDYISPYEDVS 263
              A SV++     LR  E  K + I     F+      ++M++W+ DW +L YISPYE+  
Sbjct:   203 HAVSVLEKKARTLRKGEYTKGSAIAFPMKFSNGFVVDKKMKKWIDDWQKLPYISPYENAL 262

Query:   264 NLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYL 323
             +L  +S E +K   AV HE+++L + K++    +    +     + F      H GIFYL
Sbjct:   263 HLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNHPGIFYL 322

Query:   324 SLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKDME 383
             S K    T +LR+ Y+   LI+ + L+  + R+++L+   K +        ++E K  +E
Sbjct:   323 SSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTVKKDNKAVSSSSKKEDKGKVE 382

Query:   384 KMALRSEDEEEKLD 397
                  ++ + E  D
Sbjct:   383 GEVCDTDAKAENDD 396

GO:0005739 "mitochondrion" evidence=IDA

GO:0009220 "pyrimidine ribonucleotide biosynthetic process" evidence=RCA

TAIR|locus:2064940 WTF9 "AT2G39120" [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 98/349 (28%), Positives = 168/349 (48%)

Query:    28 THTHQIKLISSLKVVWRKDQKLD--QAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKR 85
             T+  Q +    + + W++D   D  + I    Q K    +   ++ EP + IP+  + K+
Sbjct:    16 TNLTQKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKK 75

Query:    86 RERLSLNVKVRTFLNRYPGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEE 145
               +  ++ K+  FL ++P +F  +   + P+ +   F R +    +   +ER +Y  + +
Sbjct:    76 TRQFDVSTKIAHFLRKFPSIFEEF---VGPEYNLPWF-RLTPEATELDRQERVVYQTSAD 131

Query:   146 LLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSF 205
              L  +L KL++MSKD VL +  +  +K   G P+D+L        + F+ V    +G   
Sbjct:   132 DLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDME-DGVKG 190

Query:   206 LELESWNPDFAKSVIQLRAEE----EAKLTGI--PVRPNFNEEMREWVRDWL----ELDY 255
             L ++    D   SV+Q  A +    E  L  I  P+ P+    +R  + DWL    +L Y
Sbjct:   191 LAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPY 250

Query:   256 ISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFT 315
             +SPY+D S LD SS   EKR V   HELL L +        L      +        AF 
Sbjct:   251 VSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFE 310

Query:   316 RHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGK 364
             RH  IFYLS+K    TA+LRE YR    ++  P+L +++++++L++  +
Sbjct:   311 RHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSE 359

GO:0005739 "mitochondrion" evidence=IDA

GO:0000373 "Group II intron splicing" evidence=IMP

GO:0003723 "RNA binding" evidence=IDA

GO:0017004 "cytochrome complex assembly" evidence=IMP

TAIR|locus:2166305 emb1692 "embryo defective 1692" [Arabidopsis thaliana (taxid:3702)]

 Score = 339 (124.4 bits), Expect = 9.0e-31, P = 9.0e-31
 Identities = 112/391 (28%), Positives = 189/391 (48%)

Query:    37 SSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLN--VK 94
             S+ K+V  +   LD+ +    + +   ++   +L++P   IP+  L K R  L +   + 
Sbjct:    55 SAHKIV--RSPSLDRHVVKQNRVRFVQKLNTLLLSKPKHYIPIEILYKCRSYLCIENPLA 112

Query:    95 VRTFLNRYPGLFYTY--------YDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEEL 146
             + + + RYP +F  +         +  KP S   L +R +        +E  +     + 
Sbjct:   113 ILSMIRRYPTIFELFTTPTPHLPMNATKPLSQ--LCVRLTSAASSLAMQELNLKSEISDK 170

Query:   147 LVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFL 206
             L  KL KLLM+S  + L + KLVH+  +FGFP +F  +L   YP+ FK V     G++ L
Sbjct:   171 LATKLQKLLMLSSHRRLLLSKLVHIAPDFGFPPNFRSRLCNDYPDKFKTVDT-SYGRA-L 228

Query:   207 ELESWNPDFAKSVIQ------LRAEEEAKLTGIPVRPNFNEEMRE--WVRDWLELDYISP 258
             EL S +P+ A  +        L  +   K   + +R   N + R   ++  + E   + P
Sbjct:   229 ELVSSDPELANQMPSPEVDRGLIVDRPLKFKRLNLRRGLNLKRRHQGFLIKFRESPDVCP 288

Query:   259 YEDVSN-LDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRH 317
             Y+  S+ L   S E EKR  AV  E+L L++ KR  +  L  F  E+   N       RH
Sbjct:   289 YKMSSDYLASESIEAEKRACAVVREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRH 348

Query:   318 SGIFYLSLKGGIKTAMLREAYR-HSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQRE 376
               +FY+S+KG   +  L EAY  + +L+D+D  L I+ER ++L+++GK       R++RE
Sbjct:   349 PELFYVSIKGMRDSVFLVEAYNDNGDLLDKDERLVIRERLIDLIQEGK-------RIRRE 401

Query:   377 EVKKDMEKMALRSEDEEEKLDELM--YDEQM 405
               +K    +  +S +E+ K DE +  YD  +
Sbjct:   402 RRRKGAT-LGDKSVEEKRKDDETIDDYDSDL 431

GO:0005634 "nucleus" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=NAS

TAIR|locus:504955534 RPD1 "ROOT PRIMORDIUM DEFECTIVE 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 202 (76.2 bits), Expect = 7.5e-30, Sum P(2) = 7.5e-30
 Identities = 77/293 (26%), Positives = 129/293 (44%)

Query:    10 LYLQNLITTYKPHVNPNFTHTHQIKLI------SSLKVVWRKDQKLDQAIENDKQY-KLC 62
             L+L+N   T  P      T    I LI       S  +  ++D+  D   +N  +  K  
Sbjct:     3 LFLRNAFKTLNPKRKLATTILPSINLILVKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKI 62

Query:    63 ARVVKE---VLNEPGQVIPLRYLEKRRERLSLNVKVR---TFLNRYPGLFYTYYDRIKPK 116
              +VVK    +L++P   I +  L+    RL L  K      FL ++P +F  Y   ++  
Sbjct:    63 RKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLLKFPHVFEIYEHPVQ-- 120

Query:   117 SDAVLFLRPSDRLRDFLEEERK-IYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREF 175
                +L+ R + +  D +  E + + D   +  V +L KL+MMS    + ++ +   + EF
Sbjct:   121 --RILYCRLTRKALDQIRHEHEAVLDQIPDA-VTRLRKLVMMSNTGRIRLEHVRIARTEF 177

Query:   176 GFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEEEAKLTGIP- 234
             G P DF   ++ ++P +F+L+        ++E+   +P+ +   I+   E E +  GI  
Sbjct:   178 GLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAIERVREIEYRTKGIDA 237

Query:   235 --VR--------PNFN--EEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKR 275
               VR        P F   +  R  V  W  L Y SPYED+S  D  S E + R
Sbjct:   238 EDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLRSMEAQNR 290

GO:0009507 "chloroplast" evidence=ISM

GO:0008285 "negative regulation of cell proliferation" evidence=IMP

GO:0010102 "lateral root morphogenesis" evidence=IMP

TAIR|locus:2138738 AT4G08940 [Arabidopsis thaliana (taxid:3702)]

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 94/329 (28%), Positives = 163/329 (49%)

Query:    49 LDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSL--NVKVRTFLNRYPGLF 106
             L+  +  D  ++   R  + +  +P +++ L    K    L      KV  F+ ++P +F
Sbjct:    71 LESLVSRDAHFRFLIRSKEFISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKHPLIF 130

Query:   107 YTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVD 166
              TY       SD  ++L  ++ + D L+EE+ + ++ E   V  + KLLMM+KDK + + 
Sbjct:   131 QTYRH-----SDGKIWLGFTEFMEDLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILLS 185

Query:   167 KLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQ---LR 223
             K+ H +  FG P DF  + V +YP+YF++V   G+G   LEL +W+ + A S ++   + 
Sbjct:   186 KIHHTRLLFGIPEDFRDR-VAKYPDYFRVV-TGGDGNRVLELVNWDTNLAVSELERLFMI 243

Query:   224 AEEEAK-LTGIPVRPNFNEEMREWVRDWLEL----DYISPYEDVSNLDQSSQEMEKRTVA 278
              E++AK +   PV+     E+ E     L L      +SPY D   LD  S E EK  V 
Sbjct:   244 DEDKAKRVFKFPVKHGKELELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEAEKYRVG 303

Query:   279 VFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAY 338
             + HE L+L++ KR  +  + +F DE+  +        + S  FYL+      T  L++AY
Sbjct:   304 IVHEFLNLTLEKRASIHHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFLKDAY 363

Query:   339 -RHSELIDRDPLLEIKERFVELLEKGKHE 366
               +  L+ +DP +   E+  +  +  + E
Sbjct:   364 DENGVLVSKDPQVVFNEKLYKYADMQQME 392

GO:0009507 "chloroplast" evidence=ISM

GO:0006979 "response to oxidative stress" evidence=IMP

GO:0015824 "proline transport" evidence=RCA

TAIR|locus:2207380 AT1G79120 [Arabidopsis thaliana (taxid:3702)]

 Score = 212 (79.7 bits), Expect = 4.4e-27, Sum P(2) = 4.4e-27
 Identities = 51/143 (35%), Positives = 76/143 (53%)

Query:   236 RPNFNEEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVP 295
             RPN +  + E+ + W ++++ SPY +    D +  +  KR VAV HELLSL++ KR+   
Sbjct:   273 RPNASY-LEEFEK-WQKMEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTMEKRVTCA 330

Query:   296 ILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKER 355
              L  F  EY   +       +H GIFY++ KG   T  L++AY  S LI++ PLL   +R
Sbjct:   331 QLDAFHSEYLLPSRLILCLIKHQGIFYITNKGARGTVFLKDAYAGSNLIEKCPLLLFHDR 390

Query:   356 FVELLEKGKHEWTEQLRLQREEV 378
             FV L   G+ E      +Q   V
Sbjct:   391 FVALC--GRKEVNLSNEMQSSSV 411

GO:0005739 "mitochondrion" evidence=ISM

TAIR|locus:2009230 AT1G06440 [Arabidopsis thaliana (taxid:3702)]

 Score = 234 (87.4 bits), Expect = 2.2e-17, P = 2.2e-17
 Identities = 76/308 (24%), Positives = 137/308 (44%)

Query:    77 IPLRYLEKRRERLSLNVKVRTFLNRYPGLFYTYYDRIKPK-----SDAVLFLRPSDRLRD 131
             + + +L +  ++L LN    +FL +YP +F+  YD +K +     +D  + +   + L  
Sbjct:    71 LSIEFLSRLSQKLHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALA- 129

Query:   132 FLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFG----FPNDFLVKLVP 187
                    + D    LL   + K + +    V  V + + +  +F       N  L KL  
Sbjct:   130 ITATLSLVVDRLVRLLSMSISKSIPLRA--VFKVWRELGLPDDFEDSVISKNPHLFKLSD 187

Query:   188 RYPNYFKLVGCPGEGQSFLELES----WNP-DFAKSVIQL-RAEEEAKLT-GIPVRPNFN 240
              + +   ++    E +  LE E+    W   + +K    + R E +       P     +
Sbjct:   188 GHESNTHILELVQEEEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLS 247

Query:   241 EEMREWVRDWLELDYISPYEDVSNLDQSSQEM---EKRTVAVFHELLSLSIFKRIPVPIL 297
             +  +  V++W  L Y+ PYED+    +S   +   EKR VA+ HE L+L++ K + V  +
Sbjct:   248 KTFKAKVKEWQRLPYVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKI 307

Query:   298 GKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFV 357
               F   +         F  H G+FY+S KG   T  LREAY    LID +P+ + + + +
Sbjct:   308 SHFRKCFGIDLNIRDLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLL 367

Query:   358 ELLEKGKH 365
             +L+  G+H
Sbjct:   368 DLVLLGRH 375


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.137   0.398    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      405       405    0.0010  117 3  11 22  0.39    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  614 (65 KB)
  Total size of DFA:  258 KB (2137 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  41.74u 0.13s 41.87t   Elapsed:  00:00:01
  Total cpu time:  41.74u 0.13s 41.87t   Elapsed:  00:00:01
  Start:  Sat May 11 04:37:36 2013   End:  Sat May 11 04:37:37 2013

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.19	LOW CONFIDENCE prediction!
3rd Layer	3.4.19.12	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	405
pfam11955	332	pfam11955, PORR, Plant organelle RNA recognition d	1e-112

>gnl|CDD|221338 pfam11955, PORR, Plant organelle RNA recognition domain

 Score =  331 bits (852), Expect = e-112
 Identities = 138/335 (41%), Positives = 197/335 (58%), Gaps = 17/335 (5%)

Query: 43  WRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNRY 102
           W +D  LD+A+E +K+ +L  R+   +L++P   +PLR L K R +L L      FL +Y
Sbjct: 1   WVRDPALDKAVEREKRLRLVLRLKDLLLSQPDHSLPLRDLSKLRRQLGLPRGALAFLRKY 60

Query: 103 PGLFYTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKV 162
           P +F  +       SD+VL +R + +  D L EE ++ +++E  LV +L KLLMMSKD+ 
Sbjct: 61  PSIFELFR----HPSDSVLCVRLTPKAEDLLAEEARLLESSEPDLVDRLRKLLMMSKDRR 116

Query: 163 LSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQL 222
           L ++KL H++R+ G P+DF   LVP+YP+YF+LV    +G   LEL SW+P+ A S ++ 
Sbjct: 117 LPLEKLAHLRRDLGLPDDFRDSLVPKYPDYFRLV--DEDGGDGLELVSWDPELAVSALEK 174

Query: 223 RAEEE-AKLTGIPVRPNFN----------EEMREWVRDWLELDYISPYEDVSNLDQSSQE 271
           R E E      +  R  F           ++ RE + +W +L YISPYED S+LD  S E
Sbjct: 175 RREIEDRGGDRVDRRFAFPVKFPPGFKLRKKFREKLEEWQKLPYISPYEDASHLDPGSDE 234

Query: 272 MEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKT 331
            EKR VAV HELLSL++ KR  V  L  F  E+           RH GIFYLS KG   T
Sbjct: 235 AEKRAVAVLHELLSLTVEKRTEVDHLTHFRKEFGLPQKLRKVLLRHPGIFYLSTKGKRHT 294

Query: 332 AMLREAYRHSELIDRDPLLEIKERFVELLEKGKHE 366
             LREAY   EL+++DPL+  +E+ +EL+ +GK E
Sbjct: 295 VFLREAYDRGELVEKDPLVLAREKLLELMLEGKRE 329

This family, which was previously known as DUF860, has been shown to be a component of group II intron ribonucleoprotein particles in maize chloroplasts. The domain is required for the splicing of the introns with which it associates, and promotes splicing in the context of a heterodimer with the RNase III-domain protein RNC1. All of the members are predicted to localise to mitochondria or chloroplasts. It seems likely that most PORR proteins function in organellar RNA metabolism. Length = 332

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	405
PF11955	335	PORR: Plant organelle RNA recognition domain; Inte	100.0
PF11955	335	PORR: Plant organelle RNA recognition domain; Inte	99.44

>PF11955 PORR: Plant organelle RNA recognition domain; InterPro: IPR021099 The plant organelle RNA recognition (PORR) domain, previously known as DUF860, is a component of group II intron ribonucleoprotein particles in maize chloroplasts

Probab=100.00  E-value=7.2e-111  Score=837.81  Aligned_cols=321  Identities=43%  Similarity=0.780  Sum_probs=304.1

Q ss_pred             eecChhhHHHHHhhccchHHHHHHHHHHcCCCCccchhhHHhhccccCCC-hhHHHHHhhCCCceEeeecCCCCCCCCcc
Q 045168           43 WRKDQKLDQAIENDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLN-VKVRTFLNRYPGLFYTYYDRIKPKSDAVL  121 (405)
Q Consensus        43 w~rd~~LD~~v~r~k~lr~v~~lk~li~s~P~~~lpl~~L~k~r~~L~l~-~~v~~FlrkyP~iF~~~~~~~~p~~~~~~  121 (405)
                      |+||++||++|+++|+++++++|+++|+++|+++|||++|+++++.||++ +++++||+|||+||++|.|+    ..+++
T Consensus         1 w~rd~~lD~~i~~~k~l~~v~~l~~~i~~~p~~~~pl~~l~k~~~~L~l~~~~~~~flrkyP~iF~~~~~~----~~~~~   76 (335)
T PF11955_consen    1 WVRDPYLDKVIEREKRLRFVLRLKDLILSQPSHSLPLRDLSKLRRQLGLKPRKVSRFLRKYPSIFEVFQHP----SRSVP   76 (335)
T ss_pred             CCCchhHHHHHHhhhhHHHHHHHHHHHHcCCCCcccHHHHHHHHHhcCCCcccHHHHHHhCCceEEEeccC----CCCCc
Confidence            99999999999999999999999999999999999999999999999997 89999999999999999863    44678


Q ss_pred             eeecCHHHHHHHHHHHHHHhhChHHHHHHHHHHhccCCCCeechhhHHHhHHhcCCcchhccccccCCCCCeEEeccCCC
Q 045168          122 FLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGE  201 (405)
Q Consensus       122 ~~rLT~~a~~L~~eE~~v~~~~e~~~v~rL~KLLMMS~~~rLpL~kl~~lr~dLGLP~Df~~~lv~~yP~~Frvv~~~~~  201 (405)
                      ||+||++|++|++||++|++++++++|++|+||||||.+++|||++|++++||||||+||++++|++|||+|++|+.. +
T Consensus        77 ~~~LT~~a~~L~~eE~~~~~~~e~~~v~rL~KLLMMS~~~rlpL~ki~~l~~dLGLP~Df~~~lv~~yP~~Frvv~~~-~  155 (335)
T PF11955_consen   77 WFRLTPEAEDLLREERRVREEMEPDLVERLRKLLMMSKDRRLPLSKIAHLRRDLGLPDDFRDSLVPKYPDYFRVVDLE-D  155 (335)
T ss_pred             eEEeCHHHHHHHHHHHHHHHhChHHHHHHHHHHhccCCCCcccHHHHHHHHHHcCCChhhccchhhhCCCCcEEeecC-C
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999954 4


Q ss_pred             CcceEEeeecCCCcchhHHhHHHHHhh---h--------hcCCCCCCCcc--HHHHHHHHHHhhCCCCCCCCCcCCCCCC
Q 045168          202 GQSFLELESWNPDFAKSVIQLRAEEEA---K--------LTGIPVRPNFN--EEMREWVRDWLELDYISPYEDVSNLDQS  268 (405)
Q Consensus       202 g~~~LeLv~Wd~~LAVs~~E~~~~~~~---~--------~~g~~~~~~f~--k~~r~~l~~~Q~LPyiSPYed~~~l~~~  268 (405)
                      |..+||||+|||+||||++|++++.+.   .        ...+.+|+||.  +++++|+++||+|||+|||+|+++++++
T Consensus       156 ~~~~LeLv~Wd~~LAvs~~E~~~~~~~~~~~~~~~~~~~~Fp~~fp~G~~l~k~~~~~l~~fQ~lPy~SPYed~~~l~~~  235 (335)
T PF11955_consen  156 GGRYLELVSWDPELAVSALEKRAEKEYREKREDGFDRPLAFPVSFPKGFRLKKKFREWLEEFQKLPYISPYEDASHLDPG  235 (335)
T ss_pred             CCCEEEEeecCCccCcCccchhhhhccccccccccCCceeeeecCCCCccccHHHHHHHHHHhcCCCCCCCCCccCCCCC
Confidence            668999999999999999999998541   1        12244566775  7899999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHhhccccccccchhhhhhhhhhCCchHHHHHhhhcCCceEEEeeCCeeeEEeeeccCCCCCCCCCh
Q 045168          269 SQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRDP  348 (405)
Q Consensus       269 s~e~EKRaVavlHELLSLTveKr~~~~~L~~fr~efgLp~k~~~~l~rHPgiFYvS~Kg~~~TVfLREAY~~~~Liek~P  348 (405)
                      |+++|||||||+|||||||||||+++++|+|||+|||||++++++|+|||||||||+||+|+||||||||++|+||||||
T Consensus       236 s~~~EKRaVaVlHElLSLTveKr~~~~~L~~fr~ef~lp~k~~~~l~rHPgIFYvS~kg~~~TVfLrEAY~~~~Liek~P  315 (335)
T PF11955_consen  236 SDEAEKRAVAVLHELLSLTVEKRTEVDHLTHFRKEFGLPQKFRRLLLRHPGIFYVSLKGKRHTVFLREAYDGGELIEKHP  315 (335)
T ss_pred             ChHHHhHHHHHHHHHHHhhhhhhccHHHHHHHHHHhCCcHHHHHHHHhCCCeEEEeccCCceEEEEeeccCCCCCCCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHHHhhhhhhH
Q 045168          349 LLEIKERFVELLEKGKHEWT  368 (405)
Q Consensus       349 l~~~r~k~~~Lm~~g~~~r~  368 (405)
                      ++.+|+||++||+.|.++|+
T Consensus       316 l~~~r~k~~~Lm~~~~~~~~  335 (335)
T PF11955_consen  316 LVVIREKFLELMQEGRRKRN  335 (335)
T ss_pred             hHHHHHHHHHHHhhcccccC
Confidence            99999999999999998764

It is required for the splicing of the introns with which it associates, and promotes splicing in the context of a heterodimer with the RNase III-domain protein RNC1. Proteins containing this domain are predicted to localise to mitochondria or chloroplasts []. It seems likely that most PORR proteins function in organellar RNA metabolism [].

>PF11955 PORR: Plant organelle RNA recognition domain; InterPro: IPR021099 The plant organelle RNA recognition (PORR) domain, previously known as DUF860, is a component of group II intron ribonucleoprotein particles in maize chloroplasts

Probab=99.44  E-value=5.7e-13  Score=134.24  Aligned_cols=141  Identities=19%  Similarity=0.359  Sum_probs=116.8

Q ss_pred             HHhhChHHHHHHHHHHhccCCCCeechhhHHHhHHhcCCcchhccccccCCCCCeEEeccCCCCcceEEeeecCCCcchh
Q 045168          139 IYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKS  218 (405)
Q Consensus       139 v~~~~e~~~v~rL~KLLMMS~~~rLpL~kl~~lr~dLGLP~Df~~~lv~~yP~~Frvv~~~~~g~~~LeLv~Wd~~LAVs  218 (405)
                      +..+.....|.+|+.+|.-++++.|||+.+..++..|||+.-=..+++.+||..|.+...+..+..++.|+.    -|..
T Consensus        11 i~~~k~l~~v~~l~~~i~~~p~~~~pl~~l~k~~~~L~l~~~~~~~flrkyP~iF~~~~~~~~~~~~~~LT~----~a~~   86 (335)
T PF11955_consen   11 IEREKRLRFVLRLKDLILSQPSHSLPLRDLSKLRRQLGLKPRKVSRFLRKYPSIFEVFQHPSRSVPWFRLTP----EAED   86 (335)
T ss_pred             HHhhhhHHHHHHHHHHHHcCCCCcccHHHHHHHHHhcCCCcccHHHHHHhCCceEEEeccCCCCCceEEeCH----HHHH
Confidence            444556789999999999999999999999999999999522234899999999999885556778999986    3333


Q ss_pred             HHhHHHHHhhhhcCCCCCCCccHHHHHHHHHHhhCCCCCCCCCcCCCCCCchhHHHHHHHHHHHHhhccccccccchhhh
Q 045168          219 VIQLRAEEEAKLTGIPVRPNFNEEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILG  298 (405)
Q Consensus       219 ~~E~~~~~~~~~~g~~~~~~f~k~~r~~l~~~Q~LPyiSPYed~~~l~~~s~e~EKRaVavlHELLSLTveKr~~~~~L~  298 (405)
                      .+++..                       .-.+                   ++|-.+|..|+.||||+..+++++++|.
T Consensus        87 L~~eE~-----------------------~~~~-------------------~~e~~~v~rL~KLLMMS~~~rlpL~ki~  124 (335)
T PF11955_consen   87 LLREER-----------------------RVRE-------------------EMEPDLVERLRKLLMMSKDRRLPLSKIA  124 (335)
T ss_pred             HHHHHH-----------------------HHHH-------------------hChHHHHHHHHHHhccCCCCcccHHHHH
Confidence            332222                       1122                   6778999999999999999999999999


Q ss_pred             hhhhhhCCchHHH-HHhhhcCCceEEEe
Q 045168          299 KFSDEYRFSNAFS-SAFTRHSGIFYLSL  325 (405)
Q Consensus       299 ~fr~efgLp~k~~-~~l~rHPgiFYvS~  325 (405)
                      |++++||||.+|. .++.+||+.|-|..
T Consensus       125 ~l~~dLGLP~Df~~~lv~~yP~~Frvv~  152 (335)
T PF11955_consen  125 HLRRDLGLPDDFRDSLVPKYPDYFRVVD  152 (335)
T ss_pred             HHHHHcCCChhhccchhhhCCCCcEEee
Confidence            9999999999999 66899999999988

It is required for the splicing of the introns with which it associates, and promotes splicing in the context of a heterodimer with the RNase III-domain protein RNC1. Proteins containing this domain are predicted to localise to mitochondria or chloroplasts []. It seems likely that most PORR proteins function in organellar RNA metabolism [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	405
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 65.3 bits (158), Expect = 1e-11
 Identities = 59/416 (14%), Positives = 141/416 (33%), Gaps = 95/416 (22%)

Query: 29  HTHQIKLISSLKVVWRKDQKLD-QAIENDKQYKLCARVVKEVLNEPGQVIPLRYL----E 83
           + ++  ++S  +  +  +   D + +++  +  L    +  ++     V     L     
Sbjct: 16  YQYK-DILSVFEDAFVDN--FDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL 72

Query: 84  KRRERLSLNVKVRTFLNRYPGLFYTY-YDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDN 142
            ++E +     V+ F+     + Y +    IK +        PS   R ++E+  ++Y++
Sbjct: 73  SKQEEM-----VQKFVEEVLRINYKFLMSPIKTEQRQ-----PSMMTRMYIEQRDRLYND 122

Query: 143 NEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEG 202
           N+             +K  V  +   + +++        L++L P       + G  G G
Sbjct: 123 NQVF-----------AKYNVSRLQPYLKLRQA-------LLELRPA--KNVLIDGVLGSG 162

Query: 203 QSFLELES---------------W----NPDFAKSVIQ----LRAEEEAKLTGIPVRPNF 239
           ++++ L+                W    N +  ++V++    L  + +   T        
Sbjct: 163 KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHS-S 221

Query: 240 NEEMR-EWVRDWL-ELDYISPYE-------DVSNLDQSSQEMEKRTVAVFH---ELLSLS 287
           N ++R   ++  L  L    PYE       +V N          +    F+   ++L  +
Sbjct: 222 NIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN---------AKAWNAFNLSCKILLTT 272

Query: 288 IFKRIPVPILGKFSDEYRFSNAFSSAFTRHSGIFYLSLKGGIKTAMLREAYRHSELIDRD 347
            FK++    L   +  +   +  S   T       L      +   L       E++  +
Sbjct: 273 RFKQV-TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR-----EVLTTN 326

Query: 348 PLLEIKERFVELLEKGKHEWTEQLRLQREEVKKDMEKMALRSEDEEEKLDELMYDE 403
           P   +     E +  G   W     +  +++   +E  +L   +  E     M+D 
Sbjct: 327 PRR-LS-IIAESIRDGLATWDNWKHVNCDKLTTIIE-SSLNVLEPAEYRK--MFDR 377

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 57/381 (14%), Positives = 113/381 (29%), Gaps = 115/381 (30%)

Query: 6   KSFSLYLQNLITT-------------YKP----HVNPNFTHTHQIKLISSLKVVWRKDQK 48
            +F+L  + L+TT                    H +   T      L+   K +  + Q 
Sbjct: 260 NAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLL--KYLDCRPQD 317

Query: 49  L-DQAIE-NDKQYKLCARVVKEVLNEPGQVIPLRYLEKRRERLSLNVKVRTFLNR-YPGL 105
           L  + +  N ++  + A  +++           +++   +    L   + + LN   P  
Sbjct: 318 LPREVLTTNPRRLSIIAESIRD---GLATWDNWKHVNCDK----LTTIIESSLNVLEPAE 370

Query: 106 FYTYYDR--IKPKSDAVLFLRPSDRL----RDFLEEERKIYDNNEELLVAKLCKLLMMSK 159
           +   +DR  + P S  +    P+  L     D ++ +         ++V KL K  ++ K
Sbjct: 371 YRKMFDRLSVFPPSAHI----PTILLSLIWFDVIKSD-------VMVVVNKLHKYSLVEK 419

Query: 160 DKV--------LSVDKLVHVKREF--------------GFPNDFLVKLVPRYPNYF---- 193
                      + ++  V ++ E+               F +D L+   P    YF    
Sbjct: 420 QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIP--PYLDQYFYSHI 477

Query: 194 --KLVGCPGEGQSFLELESWNPDF----AKSVIQLRAEEEAKLTGIPVRPNFNEEMREWV 247
              L       +          DF     K    +R +  A      +     +      
Sbjct: 478 GHHLKNI-EHPERMTLFRMVFLDFRFLEQK----IRHDSTAWNASGSILNTLQQ------ 526

Query: 248 RDWLEL--DYISPYEDVSNLDQSSQEMEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYR 305
              L+    YI   +          + E+   A+   L  +         I  K++D  R
Sbjct: 527 ---LKFYKPYICDNDP---------KYERLVNAILDFLPKIE-----ENLICSKYTDLLR 569

Query: 306 FSNAFSSAFTRHSGIFYLSLK 326
              A          IF  + K
Sbjct: 570 I--AL---MAEDEAIFEEAHK 585

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 48/314 (15%), Positives = 91/314 (28%), Gaps = 103/314 (32%)

Query: 107 YTYYDRIKPKSDAVLFLRPSDRLRDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVD 166
           Y Y D +    DA  F+   D  +D  +  + I    E          ++MSKD V    
Sbjct: 16  YQYKDILSVFEDA--FVDNFD-CKDVQDMPKSILSKEE-------IDHIIMSKDAVSGTL 65

Query: 167 KLVHVKREFGFPNDFLVKLVPRYPNYFKLVGCPGEGQSFLELESWNPDFAKSVIQLRAEE 226
                          L   +       ++V      Q F+E E    ++   +  ++ E 
Sbjct: 66  --------------RLFWTLLSKQE--EMV------QKFVE-EVLRINYKFLMSPIKTE- 101

Query: 227 EAKLTGIPVRPNFNEEMREWVRDWLELDYISPYEDVSNLDQSSQEMEKRTVAVFHELLSL 286
                    +P+    M           YI   E    L   +Q   K  V+     L L
Sbjct: 102 -------QRQPSMMTRM-----------YI---EQRDRLYNDNQVFAKYNVSRLQPYLKL 140

Query: 287 --SIFKRIPVPIL--------GKFS------DEYRFSNAFSSAFTRHSGIFYLSLKGGIK 330
             ++ +  P   +        GK          Y+              IF+L+L     
Sbjct: 141 RQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDF------KIFWLNL----- 189

Query: 331 TAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEWTEQLRLQREEVKKDMEKMALRSE 390
                    +S     + +LE+ ++ +  ++      ++               + LR  
Sbjct: 190 ------KNCNSP----ETVLEMLQKLLYQIDPNWTSRSDH-----------SSNIKLRIH 228

Query: 391 DEEEKLDELMYDEQ 404
             + +L  L+  + 
Sbjct: 229 SIQAELRRLLKSKP 242

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 9e-04
 Identities = 69/456 (15%), Positives = 132/456 (28%), Gaps = 139/456 (30%)

Query: 12  LQNLITTYKPHVNPNFTHTHQIKL-ISSLKVVWRKDQKLDQAIENDKQYKLCARVVKEVL 70
           LQ L+    P+      H+  IKL I S++   R+  K        K Y+ C  V+  V 
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLK-------SKPYENCLLVLLNVQ 254

Query: 71  NEPGQVIPLRYLEKRRERLSLNVKVRTFL-NRYPGLFYTYYDRIKPKSDAVLFLRPSDRL 129
           N        +         + N+  +  L  R+  +     D +   +   + L      
Sbjct: 255 NA-------KAWN------AFNLSCKILLTTRFKQVT----DFLSAATTTHISL--DHHS 295

Query: 130 RDFLEEERKIYDNNEELLVAKLCKLLMMSKDKVLSVDKLVHVKREFGFPNDFLVKLV--- 186
                +E       + LL+    K L      +       +       P    + ++   
Sbjct: 296 MTLTPDE------VKSLLL----KYLDCRPQDLPREVLTTN-------P--RRLSIIAES 336

Query: 187 ----PRYPNYFKLVGCPGEGQSFLE--LESWNPDFAKSVIQLRA--EEEAKLTGIPVRPN 238
                   + +K V C  +  + +E  L    P   + +    +     A    IP    
Sbjct: 337 IRDGLATWDNWKHVNCD-KLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH---IP---- 388

Query: 239 FNEEMREWVRDWLELDYISPYEDVSNLDQSS---------------------------QE 271
               +   +  W ++        V+ L + S                             
Sbjct: 389 --TILLSLI--WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444

Query: 272 MEKRTVAVFHELLSLSIFKRIPVPILGKFSDEYRFS---------------NAFSSAFT- 315
           + +  V  ++   +      IP  +     D+Y +S                 F   F  
Sbjct: 445 LHRSIVDHYNIPKTFDSDDLIPPYL-----DQYFYSHIGHHLKNIEHPERMTLFRMVFLD 499

Query: 316 --------RHSGIFYLSLKGGIKTAMLREAYRHSELIDRDPLLEIKERFVELLEKGKHEW 367
                   RH    + +    + T    + Y+   + D DP     ER V  +     + 
Sbjct: 500 FRFLEQKIRHDSTAWNASGSILNTLQQLKFYK-PYICDNDPKY---ERLVNAILDFLPKI 555

Query: 368 TEQLRLQREEVKKDMEKMALRSEDEEEKLDELMYDE 403
            E L   +     D+ ++AL +EDE       +++E
Sbjct: 556 EENLICSKY---TDLLRIALMAEDEA------IFEE 582

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00