Citrus Sinensis ID: 045228

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140------
Protein Sequence
IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIGDKSVFMFNALSEDEKKALIEKLEQQN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccEEEEHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHcccHHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
IKRTLQALWVLGVMGSLATYTalarpagenLVQYVIDHPTAVWFVGSLFAALTGLvfkeglcygkleagiLTFIIPSVLLGhlsglmddgvKLSLLGSWMVLFVIFAgrkftqpikddigdKSVFMFNALSEDEKKALIEKLEQQN
Flexible Loop (DISEMBL)
IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIGDKSVFMFNALSEDEKKALIEKLEQQN
Low Complexity Region (SEG)
IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIGDKSVFMFNALSEDEKKALIEKLEQQN
Disordered region (IsUnstruct)
****LQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIGDKSVFMFNAL****************
Disordered Region (DISOPRED)
IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIGDKSVFMF*******************
Disordered Region (DISEMBL)
IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIGDKSVFMFNALSEDEKKALIEKLEQQN
Disordered Region (DISPRO)
IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIGDKSVFMFNALSEDEKKALIEKL****
Transmembrane Helix (TMHMM)
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIGDKSVFMFNALSEDEKKALIEKLEQQN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
255543214	280	conserved hypothetical protein [Ricinus	1.0	0.521	0.876	1e-71
224058445	276	predicted protein [Populus trichocarpa]	1.0	0.528	0.863	6e-69
225425268	290	PREDICTED: uncharacterized protein LOC10	0.993	0.5	0.862	8e-69
12322994	295	unknown protein [Arabidopsis thaliana]	1.0	0.494	0.815	3e-65
18396666	280	uncharacterized protein [Arabidopsis tha	1.0	0.521	0.815	3e-65
297851250	280	hypothetical protein ARALYDRAFT_473022 [	0.986	0.514	0.819	3e-64
356576937	280	PREDICTED: uncharacterized protein LOC10	1.0	0.521	0.787	2e-62
388491724	296	unknown [Lotus japonicus]	1.0	0.493	0.773	3e-62
449445598	291	PREDICTED: uncharacterized protein LOC10	1.0	0.501	0.842	6e-62
307135825	291	hypothetical protein [Cucumis melo subsp	0.993	0.498	0.855	8e-62

>gi|255543214|ref|XP_002512670.1| conserved hypothetical protein [Ricinus communis] gi|223548631|gb|EEF50122.1| conserved hypothetical protein [Ricinus communis]

 Score =  273 bits (699), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 128/146 (87%), Positives = 140/146 (95%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           IKRTLQALW LGV+GS ATYT LARPAGENL+QYVID+PTAVWFVG LFAALTGLVFKEG
Sbjct: 133 IKRTLQALWALGVIGSFATYTTLARPAGENLIQYVIDNPTAVWFVGPLFAALTGLVFKEG 192

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
           LCYGKLEAG+LTFIIP+VLLGHL+GLMD+GVKL+LLG+WM LFVIFAGRKFTQP+KDD+G
Sbjct: 193 LCYGKLEAGVLTFIIPAVLLGHLTGLMDNGVKLALLGTWMTLFVIFAGRKFTQPVKDDVG 252

Query: 121 DKSVFMFNALSEDEKKALIEKLEQQN 146
           DKSVFMFNAL EDEKKALIEKLEQQ+
Sbjct: 253 DKSVFMFNALPEDEKKALIEKLEQQD 278

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224058445|ref|XP_002299513.1| predicted protein [Populus trichocarpa] gi|222846771|gb|EEE84318.1| predicted protein [Populus trichocarpa]

 Score =  265 bits (676), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 126/146 (86%), Positives = 137/146 (93%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           IKRTLQA W LGV+GSLAT T LA+PAGENL+QYV+++PTAVWFVG LFAALTGLVFKEG
Sbjct: 131 IKRTLQAFWALGVIGSLATCTNLAQPAGENLIQYVVNNPTAVWFVGPLFAALTGLVFKEG 190

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
           LCYGKLEAGILTFIIP+VLLGHL+GLMDDGVKL+LL SWM LFVIFAGRKFTQPIKDDIG
Sbjct: 191 LCYGKLEAGILTFIIPTVLLGHLTGLMDDGVKLTLLASWMALFVIFAGRKFTQPIKDDIG 250

Query: 121 DKSVFMFNALSEDEKKALIEKLEQQN 146
           DKSVFMFN+L +DEKKALIE LEQQN
Sbjct: 251 DKSVFMFNSLPDDEKKALIENLEQQN 276

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225425268|ref|XP_002270985.1| PREDICTED: uncharacterized protein LOC100245345 [Vitis vinifera] gi|296085529|emb|CBI29261.3| unnamed protein product [Vitis vinifera]

 Score =  264 bits (675), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 125/145 (86%), Positives = 138/145 (95%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           IKRTLQALW LGV+GSLATYT+LA+P GENL+QYVID+PTAVWF+G LFAALTGLVFKEG
Sbjct: 140 IKRTLQALWALGVVGSLATYTSLAQPTGENLIQYVIDNPTAVWFIGPLFAALTGLVFKEG 199

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
           LCYGKLEAGILTFIIP+VLLGHL+G+MD+GVKL+LL SWM LFVIFA RKFTQPIKDDIG
Sbjct: 200 LCYGKLEAGILTFIIPTVLLGHLTGIMDNGVKLTLLASWMALFVIFASRKFTQPIKDDIG 259

Query: 121 DKSVFMFNALSEDEKKALIEKLEQQ 145
           DKSVFMFNAL+E+EK ALIEKLEQQ
Sbjct: 260 DKSVFMFNALAEEEKMALIEKLEQQ 284

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|12322994|gb|AAG51484.1|AC069471_15 unknown protein [Arabidopsis thaliana]

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 119/146 (81%), Positives = 134/146 (91%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           IKRTLQALW LG +GS ATY ALARPAG+NLV YV+DHP+AVWFVG LFA+LTGLVFKEG
Sbjct: 133 IKRTLQALWALGFVGSFATYAALARPAGDNLVHYVVDHPSAVWFVGPLFASLTGLVFKEG 192

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
           LCYGKLEAG+LTFIIPSVLLGHLSGLM+D VKL LLG+WM LF++FAGRKFTQPIKDDIG
Sbjct: 193 LCYGKLEAGLLTFIIPSVLLGHLSGLMNDEVKLVLLGTWMALFLVFAGRKFTQPIKDDIG 252

Query: 121 DKSVFMFNALSEDEKKALIEKLEQQN 146
           DKSVF F +LS+DEKKA++EKLEQ+ 
Sbjct: 253 DKSVFTFMSLSDDEKKAIVEKLEQEK 278

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18396666|ref|NP_564300.1| uncharacterized protein [Arabidopsis thaliana] gi|9795620|gb|AAF98438.1|AC021044_17 Unknown protein [Arabidopsis thaliana] gi|15450806|gb|AAK96674.1| Unknown protein [Arabidopsis thaliana] gi|20259878|gb|AAM13286.1| unknown protein [Arabidopsis thaliana] gi|332192803|gb|AEE30924.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  252 bits (644), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 119/146 (81%), Positives = 134/146 (91%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           IKRTLQALW LG +GS ATY ALARPAG+NLV YV+DHP+AVWFVG LFA+LTGLVFKEG
Sbjct: 133 IKRTLQALWALGFVGSFATYAALARPAGDNLVHYVVDHPSAVWFVGPLFASLTGLVFKEG 192

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
           LCYGKLEAG+LTFIIPSVLLGHLSGLM+D VKL LLG+WM LF++FAGRKFTQPIKDDIG
Sbjct: 193 LCYGKLEAGLLTFIIPSVLLGHLSGLMNDEVKLVLLGTWMALFLVFAGRKFTQPIKDDIG 252

Query: 121 DKSVFMFNALSEDEKKALIEKLEQQN 146
           DKSVF F +LS+DEKKA++EKLEQ+ 
Sbjct: 253 DKSVFTFMSLSDDEKKAIVEKLEQEK 278

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297851250|ref|XP_002893506.1| hypothetical protein ARALYDRAFT_473022 [Arabidopsis lyrata subsp. lyrata] gi|297339348|gb|EFH69765.1| hypothetical protein ARALYDRAFT_473022 [Arabidopsis lyrata subsp. lyrata]

 Score =  249 bits (636), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 118/144 (81%), Positives = 133/144 (92%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           IKRTLQALW LG +GSLATY ALARPAG+NLV YV+DHP+AVWFVG LFAALTGLVFKEG
Sbjct: 133 IKRTLQALWALGFVGSLATYAALARPAGDNLVHYVVDHPSAVWFVGPLFAALTGLVFKEG 192

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
           +CYGKLEAG+LTFIIPSVLLGHLSG+M+D VKL LLG+WM LF++FAGRKFTQPIKDDIG
Sbjct: 193 ICYGKLEAGLLTFIIPSVLLGHLSGVMNDEVKLVLLGTWMALFLVFAGRKFTQPIKDDIG 252

Query: 121 DKSVFMFNALSEDEKKALIEKLEQ 144
           DKSVF F +LSE+EKKA ++KLEQ
Sbjct: 253 DKSVFTFMSLSENEKKATVKKLEQ 276

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576937|ref|XP_003556586.1| PREDICTED: uncharacterized protein LOC100778519 [Glycine max]

 Score =  243 bits (619), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 115/146 (78%), Positives = 130/146 (89%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           IKR LQALW LGV+GS  TY  LA+PA +NL+QYV+D+P+AVW VG LFAALTGLVFKEG
Sbjct: 132 IKRALQALWGLGVVGSATTYFCLAQPANKNLIQYVVDNPSAVWLVGPLFAALTGLVFKEG 191

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
           LCY KLEAG+LTF+IP +LLGHL+GLMDDGVKL+LL SWM LFVIFAGRKFTQPIKDDIG
Sbjct: 192 LCYAKLEAGLLTFVIPILLLGHLTGLMDDGVKLTLLASWMTLFVIFAGRKFTQPIKDDIG 251

Query: 121 DKSVFMFNALSEDEKKALIEKLEQQN 146
           DKSVFMFN+L  DE+KAL+EKLEQQ 
Sbjct: 252 DKSVFMFNSLPGDERKALLEKLEQQK 277

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388491724|gb|AFK33928.1| unknown [Lotus japonicus]

 Score =  242 bits (618), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 113/146 (77%), Positives = 128/146 (87%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           IKR LQALW LG++GS   Y  LA PA ENL+Q V+D+P AVW VG LFAALTGLVFKEG
Sbjct: 149 IKRALQALWGLGILGSAIAYINLALPANENLIQCVVDNPPAVWLVGPLFAALTGLVFKEG 208

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
           LCYGKLEAG+LTF+IP+VLLGH++GLMDDG +L+LL SWM LFVIFAGRKFTQPIKDDIG
Sbjct: 209 LCYGKLEAGVLTFVIPTVLLGHMTGLMDDGARLTLLASWMALFVIFAGRKFTQPIKDDIG 268

Query: 121 DKSVFMFNALSEDEKKALIEKLEQQN 146
           DKSVFMFN+LS+DE+K LIEKLEQQ 
Sbjct: 269 DKSVFMFNSLSDDERKTLIEKLEQQK 294

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445598|ref|XP_004140559.1| PREDICTED: uncharacterized protein LOC101223108 [Cucumis sativus] gi|449487379|ref|XP_004157597.1| PREDICTED: uncharacterized protein LOC101224916 [Cucumis sativus]

 Score =  241 bits (615), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 123/146 (84%), Positives = 137/146 (93%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           IKRTLQALWVLGV GSL TY  L++PAGE+LVQYV+D+P+AVWFVG L+AALTGLVFKEG
Sbjct: 140 IKRTLQALWVLGVAGSLVTYLNLSQPAGESLVQYVVDNPSAVWFVGPLYAALTGLVFKEG 199

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
           LCYGKLEAGILTF+IP++LLGHL+GLMDDGVKL+LLGSWM LFVIFAGRKF+QPIKDDIG
Sbjct: 200 LCYGKLEAGILTFVIPTLLLGHLTGLMDDGVKLALLGSWMALFVIFAGRKFSQPIKDDIG 259

Query: 121 DKSVFMFNALSEDEKKALIEKLEQQN 146
           DKSVF+FNAL EDEKKALI KLEQQ 
Sbjct: 260 DKSVFLFNALGEDEKKALIAKLEQQE 285

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|307135825|gb|ADN33697.1| hypothetical protein [Cucumis melo subsp. melo]

 Score =  241 bits (614), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 124/145 (85%), Positives = 137/145 (94%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           IKRTLQALWVLGV GSL TY  LA+PAGE+LVQYV+D+P+AVWFVG L+AALTGLVFKEG
Sbjct: 140 IKRTLQALWVLGVAGSLVTYLNLAQPAGESLVQYVVDNPSAVWFVGPLYAALTGLVFKEG 199

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
           LCYGKLEAGILTFIIP++LLGHL+GLMDDGVKL+LLGSWM LFVIFAGRKF+QPIKDDIG
Sbjct: 200 LCYGKLEAGILTFIIPTLLLGHLTGLMDDGVKLALLGSWMALFVIFAGRKFSQPIKDDIG 259

Query: 121 DKSVFMFNALSEDEKKALIEKLEQQ 145
           DKSVF+FNAL E+EKKALI KLEQQ
Sbjct: 260 DKSVFIFNALGEEEKKALIAKLEQQ 284

Source: Cucumis melo subsp. melo

Species: Cucumis melo

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	146
TAIR|locus:2010499	280	AT1G28140 "AT1G28140" [Arabido	0.993	0.517	0.820	4.8e-62

TAIR|locus:2010499 AT1G28140 "AT1G28140" [Arabidopsis thaliana (taxid:3702)]

 Score = 634 (228.2 bits), Expect = 4.8e-62, P = 4.8e-62
 Identities = 119/145 (82%), Positives = 134/145 (92%)

Query:     1 IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
             IKRTLQALW LG +GS ATY ALARPAG+NLV YV+DHP+AVWFVG LFA+LTGLVFKEG
Sbjct:   133 IKRTLQALWALGFVGSFATYAALARPAGDNLVHYVVDHPSAVWFVGPLFASLTGLVFKEG 192

Query:    61 LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
             LCYGKLEAG+LTFIIPSVLLGHLSGLM+D VKL LLG+WM LF++FAGRKFTQPIKDDIG
Sbjct:   193 LCYGKLEAGLLTFIIPSVLLGHLSGLMNDEVKLVLLGTWMALFLVFAGRKFTQPIKDDIG 252

Query:   121 DKSVFMFNALSEDEKKALIEKLEQQ 145
             DKSVF F +LS+DEKKA++EKLEQ+
Sbjct:   253 DKSVFTFMSLSDDEKKAIVEKLEQE 277


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.141   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      146       146   0.00079  103 3  11 22  0.41    31
                                                     30  0.49    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  585 (62 KB)
  Total size of DFA:  132 KB (2082 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  13.95u 0.16s 14.11t   Elapsed:  00:00:00
  Total cpu time:  13.95u 0.16s 14.11t   Elapsed:  00:00:00
  Start:  Sat May 11 07:10:52 2013   End:  Sat May 11 07:10:52 2013

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_I0883	hypothetical protein (277 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_870038	SubName- Full=Putative uncharacterized protein; (210 aa)			•						0.506
	eugene3.00041064	hypothetical protein (230 aa)			•						0.503
	gw1.XIII.1190.1	SubName- Full=Putative uncharacterized protein; (300 aa)			•						0.502
	grail3.0030014801	hypothetical protein (351 aa)			•						0.500
	fgenesh4_pg.C_LG_III001848	hypothetical protein (302 aa)			•						0.499
	grail3.0136004901	hypothetical protein (160 aa)			•						0.495
	gw1.V.3086.1	hypothetical protein (287 aa)			•	•					0.493
	eugene3.00170453	hypothetical protein (457 aa)			•						0.487
	gw1.VI.134.1	annotation not avaliable (299 aa)			•						0.484
	gw1.X.3026.1	hypothetical protein (245 aa)			•						0.479

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	146
pfam10063	134	pfam10063, DUF2301, Uncharacterized integral membr	2e-43
COG5413	168	COG5413, COG5413, Uncharacterized integral membran	7e-17

>gnl|CDD|192453 pfam10063, DUF2301, Uncharacterized integral membrane protein (DUF2301)

 Score =  138 bits (351), Expect = 2e-43
 Identities = 60/127 (47%), Positives = 81/127 (63%), Gaps = 5/127 (3%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
           ++R LQ  W +G++GS A    LA  AGE L+  V   P  +  +G LFAALTGL FKE 
Sbjct: 13  LRRALQLFWWIGLLGSAA----LALSAGEPLLATVYGQPLWILAIGPLFAALTGLAFKEY 68

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
            C+ + EA +LT ++P +LLGHL GL+   V LSLLG   +L ++ A RK+  P+  DIG
Sbjct: 69  FCFRRPEAKLLTLLLPLLLLGHLFGLLSAVVILSLLGV-ALLLLVLALRKWRMPLHFDIG 127

Query: 121 DKSVFMF 127
           DKSVF +
Sbjct: 128 DKSVFQY 134

This domain, found in various hypothetical bacterial proteins, has no known function. Length = 134

>gnl|CDD|227700 COG5413, COG5413, Uncharacterized integral membrane protein [Function unknown]

 Score = 72.5 bits (178), Expect = 7e-17
 Identities = 35/125 (28%), Positives = 49/125 (39%), Gaps = 22/125 (17%)

Query: 1   IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEG 60
            +  LQ    +G+      +TALA                    +G   A L GL FKE 
Sbjct: 64  FRLLLQLATWIGLTVYAQPFTALA--------------------LGGALATLGGLCFKEY 103

Query: 61  LCYGKLEAGILTFIIPSVLLGHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIG 120
            C+  L      F +  + L  L GL        +     VLF++ A RK+  P+  DIG
Sbjct: 104 FCFRVLLLNAQPFFVALLWL--LVGLNPLLFTQIMSLIVAVLFLVLAFRKWQMPLHFDIG 161

Query: 121 DKSVF 125
           DKS +
Sbjct: 162 DKSKY 166

Length = 168

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	146
PF10063	135	DUF2301: Uncharacterized integral membrane protein	100.0
COG5413	168	Uncharacterized integral membrane protein [Functio	100.0

>PF10063 DUF2301: Uncharacterized integral membrane protein (DUF2301); InterPro: IPR019275 This family contains uncharacterised integral membrane proteins

Probab=100.00  E-value=1.2e-57  Score=352.57  Aligned_cols=123  Identities=51%  Similarity=0.905  Sum_probs=120.9

Q ss_pred             ChHHHHHHHHHHHHHHHHHHhhhhcCCCchhHHHHHhcchhHHHHHHHHHHHhhhhhhhhhccchhhhhhhHHHHHHHHH
Q 045228            1 IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLL   80 (146)
Q Consensus         1 ~hr~LQ~~W~iG~~g~~~~~~~~a~~~~~~l~~~v~~~P~~~l~vG~~FaaLtGi~fKE~FCF~~~e~~~lt~l~P~lll   80 (146)
                      +||+||.+|.+|+++++++    +.++++|++.+|++||.++|++||+|+|+|||+|||+|||||+|++++|+++|++++
T Consensus        13 l~r~LQ~~w~iG~l~~~~l----~~~~~~~l~~~v~~~P~~~l~vG~~FaaLtGi~fKE~FCF~~~e~~~l~~llp~llL   88 (135)
T PF10063_consen   13 LHRILQLFWWIGLLGSLIL----ALQSGEPLASYVYGQPLWLLAVGPLFAALTGIAFKEYFCFRRPEAKLLTFLLPLLLL   88 (135)
T ss_pred             HHHHHHHHHHHHHHHHHHH----HhhcCcchHHHHHcCccHHHHHHHHHHHHHhHHhhchhhhhhHHHhhHHHHHHHHHH
Confidence            5999999999999999988    889889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhh
Q 045228           81 GHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIGDKSVFMF  127 (146)
Q Consensus        81 ghl~g~l~~~~~~~ll~~~~~L~~i~A~rK~~mPl~~DIGDKSvf~y  127 (146)
                      ||++|.++...++.++++|++||++||+||||||+||||||||||+|
T Consensus        89 ghl~g~~~~~~~~~ll~~~~~L~~i~A~rK~~mPl~~DIGDKSvf~~  135 (135)
T PF10063_consen   89 GHLFGLLPASVELALLGIWALLFLIFAIRKWRMPLHFDIGDKSVFQY  135 (135)
T ss_pred             HHHHCCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCCcccCccccccC
Confidence            99999999999999999999999999999999999999999999997

>COG5413 Uncharacterized integral membrane protein [Function unknown]

Probab=100.00  E-value=6.5e-42  Score=271.31  Aligned_cols=105  Identities=31%  Similarity=0.426  Sum_probs=100.5

Q ss_pred             ChHHHHHHHHHHHHHHHHHHhhhhcCCCchhHHHHHhcchhHHHHHHHHHHHhhhhhhhhhccchhhhhhhHHHHHHHHH
Q 045228            1 IKRTLQALWVLGVMGSLATYTALARPAGENLVQYVIDHPTAVWFVGSLFAALTGLVFKEGLCYGKLEAGILTFIIPSVLL   80 (146)
Q Consensus         1 ~hr~LQ~~W~iG~~g~~~~~~~~a~~~~~~l~~~v~~~P~~~l~vG~~FaaLtGi~fKE~FCF~~~e~~~lt~l~P~lll   80 (146)
                      .||.||++|.+|                    .+||+||.+.+++|++|+||||+||||+|||||+|++.+|+++|.+.+
T Consensus        64 ~~~llQ~~~~Ig--------------------~tvy~qp~t~L~lG~a~atL~Gl~fKE~FCF~~l~~~~~~~~V~~L~l  123 (168)
T COG5413          64 FRLLLQLATWIG--------------------LTVYAQPFTALALGGALATLGGLCFKEYFCFRVLLLNAQPFFVALLWL  123 (168)
T ss_pred             HHHHHHHHHHHH--------------------HHHhcCCchHHHHHHHHHHHhhHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence            389999999999                    579999999999999999999999999999999999999999999888


Q ss_pred             HHHHhhchhHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhh
Q 045228           81 GHLSGLMDDGVKLSLLGSWMVLFVIFAGRKFTQPIKDDIGDKSVFMF  127 (146)
Q Consensus        81 ghl~g~l~~~~~~~ll~~~~~L~~i~A~rK~~mPl~~DIGDKSvf~y  127 (146)
                        +.|+.|..++++++.+|++||+|+|+|||+||+|+||||||||.|
T Consensus       124 --l~gl~p~~~~qi~~~~~avLflv~a~rK~~~pl~~DIGDKS~y~y  168 (168)
T COG5413         124 --LVGLNPLLFTQIMSLIVAVLFLVLAFRKWQMPLHFDIGDKSKYQY  168 (168)
T ss_pred             --HHHhchHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccccccC
Confidence              778888899999999999999999999999999999999999987

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00