Citrus Sinensis ID: 045282

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Protein Sequence
MAVLVQKILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPICPPN
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEcccccccEEEEEEEEEEcccccccEEEEEccccccccccccccEEEEccEEEEEcccccccccEEEEEEEccccccEEEEEEEEEcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEccccEEccccEEEEEEEEccccccccEEEEcccccccEcccHHHEEccccEEEEcccccccccccEEEEEEccccccccccccccccccc
Coil and Loop (DISEMBL)
MAVLVQKILYATLFLALISEtmsqpeqgpcppetldisqketgnivqgKKEFAVEVFNWCKcaqrnvtldcdgfqtvekpdpvqmsISGFQCILlqgrdiipfsrvhfkyafddefpfyvfssapicppn
Flexible Loop (DISEMBL)
MAVLVQKILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFssapicppn
Low Complexity Region (SEG)
MAVLVQKILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPICPPN
Disordered region (IsUnstruct)
**VLVQKILYATLFLALIS************************NIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPI****
Disordered Region (DISOPRED)
*****QKILYATLFLALISE**************LDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPICPP*
Disordered Region (DISEMBL)
MAVLVQKILYATLFLALISETM********PPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPICPPN
Disordered Region (DISPRO)
**VLVQKILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPICP*N
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAVLVQKILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPICPPN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
449532246	102	PREDICTED: uncharacterized protein LOC10	0.753	0.960	0.397	7e-13
357451233	123	hypothetical protein MTR_2g063010 [Medic	0.892	0.943	0.401	1e-12
356534649	121	PREDICTED: uncharacterized protein LOC10	0.892	0.958	0.347	1e-12
356537423	121	PREDICTED: uncharacterized protein LOC10	0.892	0.958	0.336	1e-12
226498470	145	LGC1 precursor [Zea mays] gi|195610960|g	0.753	0.675	0.41	4e-12
308044199	145	uncharacterized protein LOC100501726 pre	0.753	0.675	0.41	5e-12
449437170	121	PREDICTED: uncharacterized protein LOC10	0.923	0.991	0.316	5e-12
224080576	145	predicted protein [Populus trichocarpa]	0.861	0.772	0.361	8e-12
388521591	124	unknown [Lotus japonicus]	0.946	0.991	0.377	2e-11
357142390	134	PREDICTED: uncharacterized protein LOC10	0.715	0.694	0.425	2e-11

>gi|449532246|ref|XP_004173093.1| PREDICTED: uncharacterized protein LOC101230172, partial [Cucumis sativus]

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 39/98 (39%), Positives = 57/98 (58%)

Query: 30  CPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMSISG 89
           C    + ISQ  TG+IVQGK+ +   + N C C Q ++ LDC+GF TV+  DP  +++SG
Sbjct: 4   CVLNDIAISQTTTGSIVQGKQVWKATITNNCICGQSSLKLDCNGFNTVQAVDPSILAVSG 63

Query: 90  FQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPIC 127
             C++  G+ I   + + F YA D+ FPF   SS   C
Sbjct: 64  SVCLVNGGQPIFQSTPISFTYASDNAFPFKPLSSQISC 101

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357451233|ref|XP_003595893.1| hypothetical protein MTR_2g063010 [Medicago truncatula] gi|355484941|gb|AES66144.1| hypothetical protein MTR_2g063010 [Medicago truncatula]

 Score = 78.2 bits (191), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/122 (40%), Positives = 64/122 (52%), Gaps = 6/122 (4%)

Query: 7   KILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRN 66
           KIL    FL L+S+  S+     C    L ++Q  TG  +    EF V + N C CAQ+N
Sbjct: 7   KILTLVFFLVLVSQGYSE-----CSLSDLHVTQHPTGIEINQNPEFLVIISNNCPCAQKN 61

Query: 67  VTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFS-RVHFKYAFDDEFPFYVFSSAP 125
           V L+C  FQTVE  DP  +S+SG  CI+  G+ I      V FKYA+   FP    SS  
Sbjct: 62  VKLECLNFQTVEPIDPSILSVSGDVCIVKGGQPIASGDVSVTFKYAWPHTFPLNPISSDS 121

Query: 126 IC 127
           +C
Sbjct: 122 VC 123

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356534649|ref|XP_003535865.1| PREDICTED: uncharacterized protein LOC100818721 [Glycine max]

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 7   KILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRN 66
           K L+  LFL LI +   +     C    ++I    +G ++QG+ E+ V V N C C Q  
Sbjct: 6   KYLFPILFLTLIVKGSCE-----CSINNINIGTTRSGRVIQGQPEWNVVVINNCTCTQSQ 60

Query: 67  VTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPI 126
           + L C GF+T E   P  +SI G  C+L+ G  +  F+ V F YA+D  F     SS+  
Sbjct: 61  IRLSCKGFKTSESVSPSILSIEGDSCLLINGNPLNSFATVRFSYAWDPPFLLLPTSSSIS 120

Query: 127 C 127
           C
Sbjct: 121 C 121

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356537423|ref|XP_003537227.1| PREDICTED: uncharacterized protein LOC100803432 [Glycine max]

 Score = 77.8 bits (190), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 6/122 (4%)

Query: 7   KILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRN 66
           K LY+ LFL LI       +   C    +      +G +++G  E+ V V N C CAQ  
Sbjct: 6   KYLYSILFLTLI------IKGTYCNLNNIISGTTRSGRVIRGIPEWNVVVINNCSCAQSK 59

Query: 67  VTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPI 126
           +  DC  F+T+E   P  +S+ G  C+L+ G  ++ F+ V F YA+D  F F   SS   
Sbjct: 60  IRFDCKEFRTIEDVSPSILSVQGDSCLLINGNPLMGFASVRFSYAWDPAFVFLARSSHTT 119

Query: 127 CP 128
           C 
Sbjct: 120 CS 121

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226498470|ref|NP_001147392.1| LGC1 precursor [Zea mays] gi|195610960|gb|ACG27310.1| LGC1 [Zea mays]

 Score = 76.3 bits (186), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 2/100 (2%)

Query: 30  CPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQM-SIS 88
           C    L + Q+ TG +V+GK E+AVEV N C+CAQ  V L C G  +VE  DP  + ++ 
Sbjct: 46  CRRGDLVVRQRATGRVVEGKPEYAVEVRNACRCAQSRVLLRCYGLSSVEAVDPRAIRAVD 105

Query: 89  GFQCILLQGRDIIPF-SRVHFKYAFDDEFPFYVFSSAPIC 127
           G +C+L  GR + P    V F YA+     F + SS P C
Sbjct: 106 GERCLLRGGRALAPRGGAVRFTYAWMTPQDFPLLSSRPHC 145

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|308044199|ref|NP_001183325.1| uncharacterized protein LOC100501726 precursor [Zea mays] gi|238010784|gb|ACR36427.1| unknown [Zea mays] gi|413918147|gb|AFW58079.1| LGC1 [Zea mays]

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 2/100 (2%)

Query: 30  CPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQM-SIS 88
           C    L + Q+ TG +V+GK E+AVEV N C+CAQ  V L C G  +VE  DP  + ++ 
Sbjct: 46  CRRGDLVVRQRATGRVVEGKPEYAVEVRNACRCAQSRVLLRCYGLSSVEAVDPRAIRAVD 105

Query: 89  GFQCILLQGRDIIPF-SRVHFKYAFDDEFPFYVFSSAPIC 127
           G +C+L  GR + P    V F YA+     F + SS P C
Sbjct: 106 GERCLLRGGRALAPRGGAVRFTYAWMTPQDFPLLSSRPHC 145

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437170|ref|XP_004136365.1| PREDICTED: uncharacterized protein LOC101211234 [Cucumis sativus] gi|449525405|ref|XP_004169708.1| PREDICTED: uncharacterized protein LOC101223676 [Cucumis sativus]

 Score = 75.9 bits (185), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 60/120 (50%)

Query: 9   LYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVT 68
           + A + + L+S        G C  +T++I  + +G  + G+ E+ V+V N C C Q+ + 
Sbjct: 1   MIAAIIILLLSFINQGSATGSCSLDTINIGTQRSGREIGGQPEWNVQVINNCDCPQKQIL 60

Query: 69  LDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPICP 128
           L C GFQT+E  DP  +      C+L+ G  + P S V F YA+D         S  +CP
Sbjct: 61  LSCQGFQTIEPVDPSILLKKNDNCLLINGGTVQPGSSVSFSYAYDPPVIMLPRFSVSLCP 120

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080576|ref|XP_002306168.1| predicted protein [Populus trichocarpa] gi|222849132|gb|EEE86679.1| predicted protein [Populus trichocarpa]

 Score = 75.1 bits (183), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 62/130 (47%), Gaps = 18/130 (13%)

Query: 5   VQKILYATLFLALIS-------ETMS-QPEQGP----------CPPETLDISQKETGNIV 46
           + K L A L L L +       ETM    EQGP          C    ++I    +G  +
Sbjct: 4   LMKALVAILVLCLATRGRYRTFETMKVNHEQGPSSTKDEGLCDCSLNNINIGTVRSGREI 63

Query: 47  QGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRV 106
            GK E+ V V N C+CAQ  + L C GFQTVE  DP     +G  C+L+ G  +   + V
Sbjct: 64  SGKPEWNVTVTNNCRCAQSQIKLSCMGFQTVESVDPSIFVKNGDTCLLINGNSLEASASV 123

Query: 107 HFKYAFDDEF 116
           HF YA+D  F
Sbjct: 124 HFSYAWDPPF 133

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388521591|gb|AFK48857.1| unknown [Lotus japonicus]

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 4/127 (3%)

Query: 1   MAVLVQKILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWC 60
           MA    K+L    FL LIS          C  + L + Q +TG  VQGK ++ V + N C
Sbjct: 1   MADSTTKLLLIVCFLVLISHGYGDIPH--CSIKNLSVKQAQTGVKVQGKPQWEVTISNTC 58

Query: 61  KCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYV 120
            C Q +V +DC GFQTVEK DP  + + G  C++  G ++I    V   YA+D  FP   
Sbjct: 59  -CVQGDVKVDCRGFQTVEKIDPDVLKVEGDACLVNNG-NVIYEDPVILTYAWDRSFPLTP 116

Query: 121 FSSAPIC 127
            SS   C
Sbjct: 117 ISSQVSC 123

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357142390|ref|XP_003572556.1| PREDICTED: uncharacterized protein LOC100828807 [Brachypodium distachyon]

 Score = 73.9 bits (180), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/94 (42%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 35  LDISQKETGNIVQGKKEFAVEVFNWCKCAQRNVTLDCDGFQTVEKPDPVQMS-ISGFQCI 93
           L + Q  TG +V+GK E+AVEV N C+CAQ  V L C G  +VE  DP+ +  +   +C+
Sbjct: 41  LVVRQWATGRVVEGKPEYAVEVRNRCRCAQSMVLLRCYGLSSVEAVDPLAIRPLDAERCV 100

Query: 94  LLQGRDIIPFSRVHFKYAFDDEFPFYVFSSAPIC 127
           L  GR I   + V FKYA+   F F + SS   C
Sbjct: 101 LRGGRRIPAGAPVRFKYAWMTPFDFPLLSSQAHC 134

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	130
TAIR|locus:2116612	124	AT4G32110 [Arabidopsis thalian	0.938	0.983	0.335	4.4e-13
TAIR|locus:505006542	124	AT4G32105 [Arabidopsis thalian	0.946	0.991	0.341	5e-12
TAIR|locus:2116707	122	AT4G32100 [Arabidopsis thalian	0.930	0.991	0.314	3.6e-09
TAIR|locus:2116702	124	AT4G32090 [Arabidopsis thalian	0.769	0.806	0.276	4.2e-08

TAIR|locus:2116612 AT4G32110 [Arabidopsis thaliana (taxid:3702)]

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 43/128 (33%), Positives = 62/128 (48%)

Query:     1 MAVLVQKILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWC 60
             MA    K+L   LFLA +++       G C   +L + Q +TG +VQ K E+ V V N C
Sbjct:     1 MASNACKLLCLVLFLAFVNQGY-----GDCSLNSLSVKQSKTGKLVQNKPEWEVRVTNPC 55

Query:    61 K-CAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFY 119
               C  +N  L C GF +V   D   +  SG  C++  G+ I+P   + FKY +D  F   
Sbjct:    56 NNCKFQNTELLCVGFNSVTPIDTSLLLKSGDACLVNAGKFIVPHVDIVFKYVWDTSFDLK 115

Query:   120 VFSSAPIC 127
             V     +C
Sbjct:   116 VIDGVMVC 123

GO:0005576 "extracellular region" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

TAIR|locus:505006542 AT4G32105 [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
 Identities = 44/129 (34%), Positives = 58/129 (44%)

Query:     1 MAVLVQKILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWC 60
             MA    K+L   LFLA +++       G C    L + Q +TG +VQ K E+ V V N C
Sbjct:     1 MASNACKVLCLVLFLAFVNQGY-----GDCHLNYLSVKQSKTGKLVQNKPEWEVRVTNPC 55

Query:    61 K-CAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFY 119
               C  +   L C GFQ+V       +S SG  C+L  G  I P     F Y +D  F   
Sbjct:    56 NNCKFQYTKLSCVGFQSVTPVATSLLSKSGDICLLNAGNFIFPHVDFVFNYVWDTSFDLK 115

Query:   120 VFSSAPICP 128
             V     +CP
Sbjct:   116 VIDGVIVCP 124

GO:0005576 "extracellular region" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2116707 AT4G32100 [Arabidopsis thaliana (taxid:3702)]

 Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
 Identities = 40/127 (31%), Positives = 56/127 (44%)

Query:     1 MAVLVQKILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWC 60
             MA    K L   L  A +++            E+L + Q +TGN+V+ K E+ V+V N  
Sbjct:     1 MATNACKFLCLVLLFAFVTQGYGDDSYSL---ESLSVIQSKTGNMVENKPEWEVKVLNSS 57

Query:    61 KCAQRNVTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYAFDDEFPFYV 120
              C   + TL C  F++V   D   +S SG  C+L  G  I   S   FKY +D  F   V
Sbjct:    58 PCYFTHTTLSCVRFKSVTPIDSKVLSKSGDTCLLGNGDSIHDIS---FKYVWDTSFDLKV 114

Query:   121 FSSAPIC 127
                   C
Sbjct:   115 VDGYIAC 121

GO:0005576 "extracellular region" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

TAIR|locus:2116702 AT4G32090 [Arabidopsis thaliana (taxid:3702)]

 Score = 125 (49.1 bits), Expect = 4.2e-08, P = 4.2e-08
 Identities = 29/105 (27%), Positives = 48/105 (45%)

Query:     7 KILYATLFLALISETMSQPEQGPCPPETLDISQKETGNIVQGKKEFAVEVFNWCKCAQRN 66
             K     L L+++S  +       C    + I    TG  + G+ E+ V V N C C Q++
Sbjct:     6 KCFVVVLLLSMVSHGLCL-----CTFGKIQIGAVRTGREIGGQPEWKVTVINTCNCFQKH 60

Query:    67 VTLDCDGFQTVEKPDPVQMSISGFQCILLQGRDIIPFSRVHFKYA 111
             VTL C GF   +   P+ +   G  C++++G  +   +   F YA
Sbjct:    61 VTLSCGGFAPAKPVKPLLLQPQGNTCLMIKGAALPAGATAQFTYA 105


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.438    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      130       130   0.00091  102 3  11 22  0.36    31
                                                     29  0.42    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  572 (61 KB)
  Total size of DFA:  135 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.28u 0.10s 12.38t   Elapsed:  00:00:00
  Total cpu time:  12.28u 0.10s 12.38t   Elapsed:  00:00:00
  Start:  Sat May 11 10:02:37 2013   End:  Sat May 11 10:02:37 2013

GO:0005576 "extracellular region" evidence=ISM

GO:0006486 "protein glycosylation" evidence=IEA

GO:0008378 "galactosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_IV001418 hypothetical protein (145 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	130
PF09478	80	CBM49: Carbohydrate binding domain CBM49; InterPro	97.1
PLN02171	629	endoglucanase	92.74

>PF09478 CBM49: Carbohydrate binding domain CBM49; InterPro: IPR019028 A carbohydrate-binding module (CBM) is defined as a contiguous amino acid sequence within a carbohydrate-active enzyme with a discreet fold having carbohydrate-binding activity

Probab=97.10  E-value=0.0044  Score=41.92  Aligned_cols=73  Identities=16%  Similarity=0.172  Sum_probs=56.1

Q ss_pred             ceEEEeeecCccCC---eeeEEEEEeeccccccceEEEecCCccc-cccCCCcceeEeCCeeEEeCC-cccCCCCeEEEE
Q 045282           35 LDISQKETGNIVQG---KKEFAVEVFNWCKCAQRNVTLDCDGFQT-VEKPDPVQMSISGFQCILLQG-RDIIPFSRVHFK  109 (130)
Q Consensus        35 i~V~Q~~tg~~v~G---~pe~~VtI~N~C~C~~~~V~l~C~gF~S-~~~VDP~ifr~~~~~CLVn~G-~pi~~g~~v~F~  109 (130)
                      |+|.|..+..+..|   ..+|.|+|+|.+.=+++++++.-+.+.+ .=    .+-+..++..-+=+- .+|.+|++.+|-
T Consensus         1 i~i~q~~~~sW~~~g~~y~qy~v~I~N~~~~~I~~~~i~~~~l~~~iW----~l~~~~~~~y~lPs~~~~i~pg~s~~FG   76 (80)
T PF09478_consen    1 ITITQTLVNSWTENGQTYTQYDVTITNNGSKPIKSLKISIDNLYGSIW----GLDKVSGNTYTLPSYQPTIKPGQSFTFG   76 (80)
T ss_pred             CEEEEEEEeEEEeCCEEEEEEEEEEEECCCCeEEEEEEEECccchhhe----eEEeccCCEEECCccccccCCCCEEEEE
Confidence            68899999888775   3579999999999999999999987651 11    222334577777454 399999999999


Q ss_pred             Ec
Q 045282          110 YA  111 (130)
Q Consensus       110 YA  111 (130)
                      |-
T Consensus        77 YI   78 (80)
T PF09478_consen   77 YI   78 (80)
T ss_pred             EE
Confidence            84

A few exceptions are CBMs in cellulosomal scaffolding proteins and rare instances of independent putative CBMs. The requirement of CBMs existing as modules within larger enzymes sets this class of carbohydrate-binding protein apart from other non-catalytic sugar binding proteins such as lectins and sugar transport proteins. CBMs were previously classified as cellulose-binding domains (CBDs) based on the initial discovery of several modules that bound cellulose [, ]. However, additional modules in carbohydrate-active enzymes are continually being found that bind carbohydrates other than cellulose yet otherwise meet the CBM criteria, hence the need to reclassify these polypeptides using more inclusive terminology. Previous classification of cellulose-binding domains were based on amino acid similarity. Groupings of CBDs were called "Types" and numbered with roman numerals (e.g. Type I or Type II CBDs). In keeping with the glycoside hydrolase classification, these groupings are now called families and numbered with Arabic numerals. Families 1 to 13 are the same as Types I to XIII. For a detailed review on the structure and binding modes of CBMs see []. This domain is found at the C-terminal of cellulases and in vitro binding studies have shown it to binds to crystalline cellulose []. ; GO: 0030246 carbohydrate binding, 0005576 extracellular region

>PLN02171 endoglucanase

Probab=92.74  E-value=0.43  Score=43.95  Aligned_cols=76  Identities=14%  Similarity=0.157  Sum_probs=55.0

Q ss_pred             CcceEEEeeecCccC---CeeeEEEEEeeccccccceEEEecCCccc-cccCCCcceeEeCCeeEEeCCc-ccCCCCeEE
Q 045282           33 ETLDISQKETGNIVQ---GKKEFAVEVFNWCKCAQRNVTLDCDGFQT-VEKPDPVQMSISGFQCILLQGR-DIIPFSRVH  107 (130)
Q Consensus        33 ~di~V~Q~~tg~~v~---G~pe~~VtI~N~C~C~~~~V~l~C~gF~S-~~~VDP~ifr~~~~~CLVn~G~-pi~~g~~v~  107 (130)
                      +.|+|.|..++.+..   +..+|+|+|+|++..+++++++.=..+-. .=    .+. ..++...+=+-. -|.+|+..+
T Consensus       535 ~ei~i~q~v~~sW~~~g~~y~qy~v~I~N~s~~~ik~i~i~~~~~~~~iW----~v~-~~~ngytlPs~~~sL~aG~s~t  609 (629)
T PLN02171        535 SPIEIEQKATASWKAKGRTYYRYSTTVTNRSAKTLKELHLGISKLYGPLW----GLT-KAGYGYVLPSWMPSLPAGKSLE  609 (629)
T ss_pred             ceeEEEEEEEEEEEcCCceEEEEEEEEEECCCCceeeeeeeeccccccch----hee-ecCCcccCchhhcccCCCCeeE
Confidence            368999999988885   47889999999999999999996544421 11    111 234445554443 788899999


Q ss_pred             EEEccC
Q 045282          108 FKYAFD  113 (130)
Q Consensus       108 F~YAw~  113 (130)
                      |-|=..
T Consensus       610 FgyI~~  615 (629)
T PLN02171        610 FVYVHS  615 (629)
T ss_pred             EEeecC
Confidence            999854

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00