Citrus Sinensis ID: 045300

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160------
Protein Sequence
MSSEKRNKEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPRSYSTNSSRSSRGDEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAAAGKNHMPRSNSSAAIGRIDEDKPCDFEDDLQMKPAVVFPRSKSYAVSRRSTAAVVSA
Secondary Structure (PSIPRED)
cccHHHHccccccEEEHHHHHHHHHHHHHHHHHHcHHHHcccccccccccccccccccccccEEEcccccccccHHHHHHHHHHcHHHHHHHcccHHHHHHHHHHHHHHHcccccccccccccEEEccccccccccccccccccccccccccEEEcccccEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccccEEEEEEEccccccccccccccccccccccccEEEEcccccEEEEcc
Coil and Loop (DISEMBL)
mssekrnkegnNKLSRYLKAPVKMLIKARDFYIRSITAcsdsvvfssaggvpigsvntlprsystnssrssrgdeDFRELVRANSMKILASQNQIGHLEFHRTknqeaaagknhmprsnssaaigridedkpcdfeddlqmkpavvfprsksyavsrrstaAVVSA
Flexible Loop (DISEMBL)
mssekrnkegnnklsrylkAPVKMLIKARDFYIRSITACSDSVVFSSAGgvpigsvntlprsystnssrssrgdedFRELVRANSMKILASQNQIGHLEFHRTKNQeaaagknhmprsnSSAAIGRIDEDKPCDFEDDLQMKpavvfprsksyavsrrstaavvsa
Low Complexity Region (SEG)
MSSEKRNKEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPrsystnssrssrGDEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAAAGKNHMPRSNSSAAIGRIDEDKPCDFEDDLQMKPAVVFPRSKSYAVSRRSTAAVVSA
Disordered region (IsUnstruct)
***************RYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSV**************************************************************************************************************
Disordered Region (DISOPRED)
****************YLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSV********************************************************************GRIDEDKPCDFEDDLQMKPAVVFPRSKSYAVSRRS*******
Disordered Region (DISEMBL)
***********NKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPR**************DFRELVRANSMKILASQNQIGHLEFHRTKNQ***************AAIGRIDEDKPCDFEDDLQMKPAVVFPRS****************
Disordered Region (DISPRO)
***********NKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPRSYST******RGDEDFRELVRANSMKIL**QNQIGHLEFHRTKN*************NSSAAIGRIDEDKPCDFEDDLQMKPAVVFPRSKSYAVSRRSTAAVVSA
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSSEKRNKEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPRSYSTNSSRSSRGDEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAAAGKNHMPRSNSSAAIGRIDEDKPCDFEDDLQMKPAVVFPRSKSYAVSRRSTAAVVSA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
255568643	164	conserved hypothetical protein [Ricinus	0.879	0.890	0.473	1e-28
224129760	158	predicted protein [Populus trichocarpa]	0.843	0.886	0.437	5e-22
224095023	166	predicted protein [Populus trichocarpa]	0.879	0.879	0.421	2e-18
356510594	155	PREDICTED: uncharacterized protein LOC10	0.897	0.961	0.408	4e-18
224063431	160	predicted protein [Populus trichocarpa]	0.879	0.912	0.371	5e-18
356554016	171	PREDICTED: uncharacterized protein LOC10	0.879	0.853	0.4	6e-17
358249100	156	uncharacterized protein LOC100801557 [Gl	0.885	0.942	0.383	1e-16
224127244	162	predicted protein [Populus trichocarpa]	0.903	0.925	0.371	1e-15
356564111	165	PREDICTED: uncharacterized protein LOC10	0.831	0.836	0.4	3e-15
326523511	154	predicted protein [Hordeum vulgare subsp	0.765	0.824	0.393	6e-15

>gi|255568643|ref|XP_002525295.1| conserved hypothetical protein [Ricinus communis] gi|223535453|gb|EEF37123.1| conserved hypothetical protein [Ricinus communis]

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 72/152 (47%), Positives = 109/152 (71%), Gaps = 6/152 (3%)

Query: 13  KLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSV-NTLPRSYSTNSSRSS 71
           K+S+++K+P+++L+KARDFY++S+T  SD + + +  G P G V  TLP+SYS NS++SS
Sbjct: 12  KISKFIKSPLRILLKARDFYVKSMTEYSDRIGYGTFMGCPTGHVVETLPKSYSVNSTKSS 71

Query: 72  RGDEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAAAGKN-HMPRSNSSAAIGRIDED 130
             D+D+REL+RA S + L+S+N +G L+  +++        N  MPRS+S   IGRIDE+
Sbjct: 72  SRDDDYRELLRAASTRGLSSRNDLGVLQRQQSRKSPNNTRANISMPRSHS-VGIGRIDEE 130

Query: 131 KPCDFEDDLQMKPAVVFPRSKSYAVS--RRST 160
           K CD  DD+++K   VFPRS+S+AVS  RR+T
Sbjct: 131 KACDNFDDIKVKTD-VFPRSRSHAVSATRRTT 161

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224129760|ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|222861437|gb|EEE98979.1| predicted protein [Populus trichocarpa]

 Score =  108 bits (271), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 100/151 (66%), Gaps = 11/151 (7%)

Query: 14  LSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPRSYSTNSSRSSRG 73
           L + LKAP+++L +ARDFYI+ +   SD V   S    P G+ NT+PRSYS +S++ +  
Sbjct: 13  LKKILKAPLRILARARDFYIKGMAEYSDQVCVMSC---PTGNFNTMPRSYSVSSTKPNHL 69

Query: 74  DEDFRELVRANSMKI-LASQNQIGHLEF----HRTKNQEAAAGKNHMPRSNSSAAIGRID 128
           D+D RE +RA S +  L S+N   +++       +  + A    ++MPRS++  AIGRID
Sbjct: 70  DDDRREPLRAASTRSNLGSRNSKINVDVPARQQYSHKKSATRLGDNMPRSHT-VAIGRID 128

Query: 129 EDKPCDF-EDDLQMKPAVVFPRSKSYAVSRR 158
           E+KPCDF E+D+++K   V+PRS+SYAVS+R
Sbjct: 129 EEKPCDFDEEDVKVK-TNVYPRSRSYAVSKR 158

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224095023|ref|XP_002310332.1| predicted protein [Populus trichocarpa] gi|222853235|gb|EEE90782.1| predicted protein [Populus trichocarpa]

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 25/171 (14%)

Query: 2   SSEKRNKEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPR 61
           +S+K +KE   KL R LK P+K+L  ARDFY++ +T  SD V   S    P G++N +PR
Sbjct: 3   TSKKPSKES--KLKRILKVPLKILTSARDFYMKGMTEYSDQVYVMSN---PTGNLNNMPR 57

Query: 62  SYSTNSSRSSRGDEDFRELVRA----------NSMKILASQNQIGHLEFHRTKNQEAAAG 111
           SYS +SS+S+  D+D+REL+RA          N+M + A Q  I          + AA  
Sbjct: 58  SYSVSSSKSNHFDDDYRELIRAASTRSTLGRSNNMDVRARQQYIIR------DKKSAAEV 111

Query: 112 KNHMPRSNSSAAIGRIDEDK-PCDFED--DLQMKPAVVFPRSKSYAVSRRS 159
            ++M RS  S  IGRIDE+   CDF++  D++ K   V+PRS+SYAVS+R+
Sbjct: 112 ADNMSRSR-SVVIGRIDEETSTCDFDEDQDVKAKTGQVYPRSRSYAVSKRT 161

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510594|ref|XP_003524022.1| PREDICTED: uncharacterized protein LOC100785988 [Glycine max]

 Score = 96.3 bits (238), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 15/164 (9%)

Query: 5   KRNKEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPI---GSVNTLPR 61
           K NK+  NKL   +  P++ML KARD Y+RSIT C   + +S+    P+   G    LPR
Sbjct: 3   KGNKKKQNKLVWIITTPLRMLGKARDIYVRSITNCGHKMNYSN----PVDAAGRFQALPR 58

Query: 62  SYSTNSSRSSRGDEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAAAGKNHMPRSNSS 121
           SYS  +SRS   +EDF EL+RA S + L   N+I      + + Q      N +P+S +S
Sbjct: 59  SYSAATSRSD-NNEDFAELLRAASARTLG--NRIDVDLVLKQQAQARPVSSNGLPKS-TS 114

Query: 122 AAIGRIDEDKPCDF-EDDLQMKPAVVFPRSKSYAVSRRSTAAVV 164
             +GRIDED P D  E ++ + P   +PRS+SYAV    T+AV+
Sbjct: 115 VGMGRIDEDTPYDLGEGEVPVVPK-AYPRSRSYAVG--MTSAVL 155

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224063431|ref|XP_002301143.1| predicted protein [Populus trichocarpa] gi|222842869|gb|EEE80416.1| predicted protein [Populus trichocarpa]

 Score = 95.9 bits (237), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 10/156 (6%)

Query: 11  NNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPRSYSTNSSRS 70
            +K  R +  PV++L KARD Y++SI  CS  + +  +  +P G    LP S+S  SSR 
Sbjct: 8   QSKFMRVVAIPVRLLCKARDVYVKSIIDCSTRMGYGHSMALPTGRYPPLPWSFSIGSSRC 67

Query: 71  SRGDEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAA---AGKNHMPRSN--SSAAIG 125
           +  +ED+R+LVRA S + L  +N+I  +   + + Q+++     K  +P+S       +G
Sbjct: 68  N-DNEDYRKLVRAASARSLGQRNEI-EMFIQQLRQQQSSIMVGSKMFLPKSCGFGMGIMG 125

Query: 126 RIDEDKPCDFEDDLQ--MKPAVVFPRSKSYAVSRRS 159
           RID DKPCDFE      +KP +  PRS+S+AV R+ 
Sbjct: 126 RIDGDKPCDFETGAGAVVKPQLG-PRSRSFAVGRKG 160

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554016|ref|XP_003545346.1| PREDICTED: uncharacterized protein LOC100803346 [Glycine max]

 Score = 92.0 bits (227), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/160 (40%), Positives = 93/160 (58%), Gaps = 14/160 (8%)

Query: 8   KEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPRSYSTNS 67
           K+  NKL R + +P++ L KARD Y+RSIT C   V +   GG P        RS+S  +
Sbjct: 5   KQSQNKLVRIMASPIRALGKARDMYVRSITNCGQHVSY-YGGGDPTEGAGRFSRSHSVAT 63

Query: 68  SRSSRGD---EDFRELVRANSMKILASQNQIGHLEFHRTKNQEAAAGK-NHMPRSNSSAA 123
           S ++R +   ED+ EL+RA S + LA  N+I  ++    + Q A + K N++P+S SS  
Sbjct: 64  STTTRYEVVSEDYAELLRAASARTLA--NRI-DMDLVLKQQQHANSLKGNNLPKS-SSVG 119

Query: 124 IGRIDEDKPCDFEDDLQM--KPAVVFPRSKSYAVSRRSTA 161
           + RIDEDKP D E  +     P   +PRS+SYAV++R  A
Sbjct: 120 MARIDEDKPYDSEGGVAFVTDP---YPRSRSYAVAKRGPA 156

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|358249100|ref|NP_001239737.1| uncharacterized protein LOC100801557 [Glycine max] gi|255637389|gb|ACU19023.1| unknown [Glycine max]

 Score = 91.3 bits (225), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 90/159 (56%), Gaps = 12/159 (7%)

Query: 5   KRNKEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPI---GSVNTLPR 61
           K NK+  NKL   +  P ++L KARD Y+ SIT C  ++ +S+    P+   G    LPR
Sbjct: 3   KGNKK-KNKLVWMIATPFRVLGKARDMYVSSITKCGHNMNYSN----PVDAAGRFQALPR 57

Query: 62  SYSTNSSRSSRGDEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAAAGKNHMPRSNSS 121
           SYS  +SRS   +EDF EL+RA S + L +   +  +   + + Q      N +P+S +S
Sbjct: 58  SYSAATSRSDN-NEDFAELLRAASARTLGNIIDVDLVVKQQAQTQTRPVSSNGLPKS-TS 115

Query: 122 AAIGRIDEDKPCDF-EDDLQMKPAVVFPRSKSYAVSRRS 159
             +GRIDED P D  E ++ + P   +PRS+SYAV + S
Sbjct: 116 VGMGRIDEDTPYDLGEGEVPVVPK-AYPRSRSYAVGKTS 153

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127244|ref|XP_002320023.1| predicted protein [Populus trichocarpa] gi|222860796|gb|EEE98338.1| predicted protein [Populus trichocarpa]

 Score = 87.8 bits (216), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 9/159 (5%)

Query: 5   KRNKEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPRSYS 64
           K   +  +K  R +  PV++L KARD Y++S+T  S  +    +  +  G    LP+S+S
Sbjct: 2   KTKAQNQSKFMRVMTIPVRVLCKARDVYVKSMTDFSMRMSNGPSMALLAGQHPPLPKSFS 61

Query: 65  TNSSRSSRGDEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAA---AGKNHMPRSNSS 121
             SSRS  G ED R+LVRA S + L   N+I  +   + + Q+++     K  +P+S+S 
Sbjct: 62  VGSSRSDDG-EDHRQLVRAASARSLGHSNEI-EMYMQQLRQQQSSMTMGSKKVLPKSSSV 119

Query: 122 A--AIGRIDEDKPCDFED-DLQMKPAVVFPRSKSYAVSR 157
               +GRIDEDK C FE+  + +KP  + PRS+SYAV +
Sbjct: 120 GMRCMGRIDEDKSCVFEEVGVDVKPQ-LGPRSRSYAVGK 157

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564111|ref|XP_003550300.1| PREDICTED: uncharacterized protein LOC100793150 [Glycine max]

 Score = 86.7 bits (213), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 85/150 (56%), Gaps = 12/150 (8%)

Query: 8   KEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPRSYST-N 66
           K+  NK  R + +P++ L KARD Y+RSIT C   V +   GG P        RS+S   
Sbjct: 6   KQSQNKFVRIMASPIRALGKARDMYVRSITNCGQHVSY--YGGDPTEGAGRFSRSHSVAT 63

Query: 67  SSRSSRGDEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAAAGK-NHMPRSNSSAAIG 125
           S+RS    ED+ EL+RA S + LA  N+I  ++    + Q A + K N++P+S SS  + 
Sbjct: 64  STRSEVVSEDYAELLRAASARTLA--NRI-DMDLVLKQQQHANSSKGNNLPKS-SSVGMA 119

Query: 126 RIDEDKPCDFEDDLQMKPAVVFPRSKSYAV 155
           RI+EDKP D E  +       +PRS+SYAV
Sbjct: 120 RIEEDKPYDSEKGVTDS----YPRSRSYAV 145

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326523511|dbj|BAJ92926.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score = 85.5 bits (210), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 80/150 (53%), Gaps = 23/150 (15%)

Query: 10  GNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSA-GGVPIGSVNTLPRSYSTNSS 68
           G+ KL    +AP +   +ARDFY+RSIT C+  V   +A G  P+     LPRS S  S 
Sbjct: 4   GSGKLRWLWRAPARAFGRARDFYVRSITGCARYVPADAAFGAYPVLVPAPLPRSQSCGSG 63

Query: 69  RS-SRGDEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAAAGKNHMPRSNS---SAAI 124
                G+ED REL+RA      ASQ + G       + Q  AA  + +PRS S   +A++
Sbjct: 64  AGWDGGEEDLRELIRA------ASQRRDG-------EQQRQAAHLHAVPRSQSVAGAASM 110

Query: 125 GRIDEDKPCDFEDDLQMKPAVVFPRSKSYA 154
            RIDED PC+F        A ++ RS+SYA
Sbjct: 111 ARIDEDAPCEFASG-----AALYSRSQSYA 135

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	166
TAIR|locus:2012833	167	AT1G10140 "AT1G10140" [Arabido	0.879	0.874	0.331	3.8e-14
TAIR|locus:504954998	150	AT5G65925 "AT5G65925" [Arabido	0.319	0.353	0.423	1.5e-11
TAIR|locus:2120150	148	AT4G37700 "AT4G37700" [Arabido	0.819	0.918	0.331	2e-10
TAIR|locus:2037670	179	AT1G58420 "AT1G58420" [Arabido	0.614	0.569	0.315	1.1e-07
TAIR|locus:2097405	161	AT3G49820 "AT3G49820" [Arabido	0.680	0.701	0.276	2.1e-06

TAIR|locus:2012833 AT1G10140 "AT1G10140" [Arabidopsis thaliana (taxid:3702)]

 Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
 Identities = 54/163 (33%), Positives = 85/163 (52%)

Query:     8 KEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAGGV--PI----GSVNTLPX 61
             K+  +K  R +  P++ L KARDFY+RSIT C+    +SS+  V  P      S +    
Sbjct:     2 KQNQSKFLRIISTPLRALGKARDFYVRSITGCAARTQYSSSASVSAPFPRSRSSSSAAFS 61

Query:    62 XXXXXXXXXXXG-DEDFRELVRANSMKILASQNQIGHLEFHRTKNQEAAAGKNHMPRSNS 120
                        G DED+ ELVRA S++ L  +N+I  L   + + Q+    +  +P+S S
Sbjct:    62 SSASSRRTTDFGIDEDYSELVRAASVRSLGHKNEIDMLIQEKLQQQKQQK-QGGLPKS-S 119

Query:   121 SAAIGRIDEDKPCDFEDDLQMKPA-------VVFPRSKSYAVS 156
             SA + RI+E++  + E  +  K         +++PRSKSYAV+
Sbjct:   120 SAGMARIEEEEETE-EGSVNPKVKKTKKVSDLLYPRSKSYAVT 161

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:504954998 AT5G65925 "AT5G65925" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
 Identities = 25/59 (42%), Positives = 37/59 (62%)

Query:     1 MSSEKRNKEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSAG----GVPIGS 55
             M +++  KE N  L+R +K+PV+ LI ARD YIRS+T+CS   +    G    G+P G+
Sbjct:     1 MKAKEMKKESN--LARLVKSPVRFLIMARDAYIRSMTSCSAGFIRGGGGSGAFGLPPGN 57

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2120150 AT4G37700 "AT4G37700" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 51/154 (33%), Positives = 74/154 (48%)

Query:     7 NKEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSS--AGGVPIGSVNTLPXXXX 64
             +K+   KLS+Y+K P+KML+KARD YIRS+   S   +  S  + G+P+ +V+TLP    
Sbjct:     2 SKKKETKLSKYIKVPIKMLVKARDMYIRSMNQFSSHDLPGSGMSFGIPVCNVSTLPRSFS 61

Query:    65 XXXXXXXXGDEDFR--ELVRANSMKILASQNQIGHLEFHRTKNQEAAAGKNHMPRSNSSA 122
                       ED R  +LVRA S    A    I       +K ++A + ++         
Sbjct:    62 ASHSQYSVRAEDDRVAKLVRAAS----ARNATIDGARHEPSKLRKAKSSRS----CGGHR 113

Query:   123 AIGRIDEDKPC-DFEDDLQMKPAVVFPRSKSYAV 155
                +IDE  P   F    +M     F RSKSY+V
Sbjct:   114 GFEKIDEASPLISFGSKHKM-----FQRSKSYSV 142

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2037670 AT1G58420 "AT1G58420" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 35/111 (31%), Positives = 56/111 (50%)

Query:     5 KRNKEGNNKLSRYLKAPVKMLIKARDFYIRSITACSDSVVFSSA---GGVPIG-SVNTLP 60
             KR ++  N+  R +  P+K+L KARD Y+RSIT C+    +SSA     VP   S +T  
Sbjct:     3 KRGQK-QNRFLRIVTMPLKVLCKARDLYMRSITGCAARTHYSSAVDAASVPFPRSRSTSS 61

Query:    61 XXXXXXXXXXXXGD----EDFRELVRANSMKILASQNQIGHLEFHRTKNQE 107
                          D    +D+ EL+RA S++ L  +N+I  +   + + Q+
Sbjct:    62 AFSSSASSRRRSSDFTFDDDYSELLRAASVRSLGHKNEIDMIIQQQQQQQQ 112

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2097405 AT3G49820 "AT3G49820" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 34/123 (27%), Positives = 53/123 (43%)

Query:    18 LKAPVKMLIKARDFYIRSITACSDSVVFSSAGGVPIGSVNTLPXXXXXXXXXXXXGDEDF 77
             +KAP ++LI ARD YIRSIT+CS + ++S  G    G ++                D   
Sbjct:    16 VKAPFRLLIMARDAYIRSITSCSGAGIYSGGGSSGFGQLS----------GNFQICDPPS 65

Query:    78 RELVRANSMKILASQNQIGHLEFHRTKNQEAAAGKNHMPRSNSSAAIGRIDEDKPCDFED 137
               L R+ ++   A            T     +   +H   +     +GRIDE+  CD +D
Sbjct:    66 TALPRSFTLTSAAHDQGCLTRGGQPTIAMRQSLSLDHRKNNRCVVVMGRIDEEMSCDDDD 125

Query:   138 DLQ 140
             + Q
Sbjct:   126 EFQ 128


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.128   0.353    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      166       154   0.00088  105 3  11 23  0.37    32
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  548 (58 KB)
  Total size of DFA:  120 KB (2078 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.55u 0.10s 12.65t   Elapsed:  00:00:01
  Total cpu time:  12.55u 0.10s 12.65t   Elapsed:  00:00:01
  Start:  Sat May 11 11:02:18 2013   End:  Sat May 11 11:02:19 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00140030 hypothetical protein (158 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

No hit with probability above 80.00

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00