Citrus Sinensis ID: 045433

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------
Protein Sequence
MGPWAQHGPLHELEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYMASF
Secondary Structure (PSIPRED)
cccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHccEEEEHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
ccHHHHHccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcc
Coil and Loop (DISEMBL)
mgpwaqhgplheLEMVLLdlpsllcfstyTLLVLFSAEIYHQARslstnklrpayYIVNAIVYFIQRkqhtrgntgpwvkysCSYFILCCIGILDIWWQVICHaqcfpiesrDRQKKLYEVGFVTGIFCTCFLIRCIAVAVSAFeksadfdvlnnpILHLIYYMASF
Flexible Loop (DISEMBL)
mgpwaqhgPLHELEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARslstnklrpaYYIVNAIVYFIQRKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYMASF
Low Complexity Region (SEG)
MGPWAQHGPLHELEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYMASF
Disordered region (IsUnstruct)
********PLHELEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM***
Disordered Region (DISOPRED)
**P****GPLHELEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQ***************VGFVTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYMASF
Disordered Region (DISEMBL)
MGPWAQHGPLHELEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYMASF
Disordered Region (DISPRO)
*GPWAQHGPLHELEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYMASF
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGPWAQHGPLHELEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYMASF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
296086834	289	unnamed protein product [Vitis vinifera]	0.922	0.532	0.583	7e-40
225448249	290	PREDICTED: uncharacterized protein LOC10	0.910	0.524	0.584	2e-39
255569804	298	virion binding protein, putative [Ricinu	0.904	0.506	0.607	3e-38
350538713	297	tobamovirus multiplication 1 homolog 2 [	0.910	0.511	0.553	4e-37
294462156	293	unknown [Picea sitchensis]	0.910	0.518	0.534	2e-35
449531358	258	PREDICTED: uncharacterized LOC101219703	0.928	0.600	0.524	7e-34
356512050	293	PREDICTED: uncharacterized protein LOC10	0.910	0.518	0.503	1e-33
294461175	292	unknown [Picea sitchensis]	0.886	0.506	0.528	2e-33
356524830	294	PREDICTED: uncharacterized protein LOC10	0.898	0.510	0.496	1e-32
255646084	294	unknown [Glycine max]	0.898	0.510	0.496	1e-32

>gi|296086834|emb|CBI32983.3| unnamed protein product [Vitis vinifera]

 Score =  168 bits (426), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/161 (58%), Positives = 108/161 (67%), Gaps = 7/161 (4%)

Query: 13  LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQ--H 70
           LEMVLLDLP LL FSTYTLLVLF AEIYHQARSL  +KLRPAYYI+N +VYF Q      
Sbjct: 102 LEMVLLDLPGLLFFSTYTLLVLFWAEIYHQARSLPIDKLRPAYYIINGLVYFTQISIWIS 161

Query: 71  TRGNTGPWVKYSCSYFI-----LCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVT 125
            R +  P        F         +G L    ++    + FPIESR RQKKL EVGFVT
Sbjct: 162 IRLSQSPIAIEVAKLFFSVVSFFAALGFLIYGGRLFFLLRRFPIESRGRQKKLNEVGFVT 221

Query: 126 GIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYMAS 166
           G+ CTCFLIRC+ VA+SA +K AD DVLN+PIL+L YYMA 
Sbjct: 222 GVCCTCFLIRCLVVALSALDKDADLDVLNHPILNLSYYMAK 262

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448249|ref|XP_002268725.1| PREDICTED: uncharacterized protein LOC100261160 [Vitis vinifera]

 Score =  166 bits (421), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/159 (58%), Positives = 107/159 (67%), Gaps = 7/159 (4%)

Query: 13  LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQ--H 70
           LEMVLLDLP LL FSTYTLLVLF AEIYHQARSL  +KLRPAYYI+N +VYF Q      
Sbjct: 102 LEMVLLDLPGLLFFSTYTLLVLFWAEIYHQARSLPIDKLRPAYYIINGLVYFTQISIWIS 161

Query: 71  TRGNTGPWVKYSCSYFI-----LCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVT 125
            R +  P        F         +G L    ++    + FPIESR RQKKL EVGFVT
Sbjct: 162 IRLSQSPIAIEVAKLFFSVVSFFAALGFLIYGGRLFFLLRRFPIESRGRQKKLNEVGFVT 221

Query: 126 GIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM 164
           G+ CTCFLIRC+ VA+SA +K AD DVLN+PIL+L YYM
Sbjct: 222 GVCCTCFLIRCLVVALSALDKDADLDVLNHPILNLSYYM 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569804|ref|XP_002525866.1| virion binding protein, putative [Ricinus communis] gi|223534871|gb|EEF36560.1| virion binding protein, putative [Ricinus communis]

 Score =  162 bits (411), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/158 (60%), Positives = 110/158 (69%), Gaps = 7/158 (4%)

Query: 13  LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQR----- 67
           LE+VLLDLPSLL FSTYTLLVLF AEIYHQARSL  +KLRP YYIVN  VYFIQ      
Sbjct: 110 LEIVLLDLPSLLFFSTYTLLVLFWAEIYHQARSLPIDKLRPTYYIVNVFVYFIQGCIWIY 169

Query: 68  KQHTRGNTGPWV-KYSCSYFILCC-IGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVT 125
            + +R   G  + K   S    C  +G L    ++    + FPIESR RQKKLYEVG VT
Sbjct: 170 IRLSRSPVGEELAKLFFSVISFCAALGFLIYGGRLFVMLRRFPIESRGRQKKLYEVGCVT 229

Query: 126 GIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYY 163
           GI  TCFLIRC  VA+SAF+K AD DVLN+P+L+LIYY
Sbjct: 230 GICFTCFLIRCFVVAISAFDKKADIDVLNHPLLNLIYY 267

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|350538713|ref|NP_001234100.1| tobamovirus multiplication 1 homolog 2 [Solanum lycopersicum] gi|74038611|dbj|BAE43839.1| tobamovirus multiplication 1 homolog 2 [Solanum lycopersicum]

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/159 (55%), Positives = 111/159 (69%), Gaps = 7/159 (4%)

Query: 13  LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTR 72
           LEM+LLDLP LL FSTYTLLVLF AEI+HQAR+L  +KLRPAYY VNA+VYFIQ      
Sbjct: 109 LEMMLLDLPGLLFFSTYTLLVLFWAEIFHQARNLPIDKLRPAYYAVNAVVYFIQICIWIF 168

Query: 73  GNTGPW---VKYSCSYFIL----CCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVT 125
              GP    V+ +  +F +      +G +    ++    + FPIESR RQKKL+EVGFVT
Sbjct: 169 IGVGPASAAVETAKLFFAVISFTAALGFVMYGGRLFAMLRRFPIESRGRQKKLHEVGFVT 228

Query: 126 GIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM 164
           GI C CF+IRC+ VAVSAF  +AD DV+++P+L L YY+
Sbjct: 229 GICCICFMIRCVMVAVSAFNGNADVDVIDHPVLILFYYV 267

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294462156|gb|ADE76630.1| unknown [Picea sitchensis]

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/159 (53%), Positives = 106/159 (66%), Gaps = 7/159 (4%)

Query: 13  LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQR----- 67
           L  +LLDLP LL FSTYTLLVLF AEIY+QARSLST+ LRPAYYI+N  +YFIQ      
Sbjct: 105 LTAILLDLPGLLFFSTYTLLVLFWAEIYYQARSLSTDNLRPAYYIINGGIYFIQACIWIY 164

Query: 68  --KQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVT 125
              +    +      +     +   +G L    ++    + FPIES+ R+KKL EVGFVT
Sbjct: 165 LGVEDNSASEAVAKLFFAVVSLFAALGFLFYGGRLFFMLRRFPIESKGRRKKLNEVGFVT 224

Query: 126 GIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM 164
            I  TCF+IRCI VA+SAF+K AD DVL++PIL+LIYYM
Sbjct: 225 AICFTCFVIRCIVVALSAFDKDADLDVLDHPILNLIYYM 263

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449531358|ref|XP_004172653.1| PREDICTED: uncharacterized LOC101219703 [Cucumis sativus]

 Score =  148 bits (374), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 85/162 (52%), Positives = 107/162 (66%), Gaps = 7/162 (4%)

Query: 13  LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRK---- 68
           LEMV++++P LL FSTYTLLVLF AEIYHQARSL  +KL+P Y IVN ++Y IQ      
Sbjct: 97  LEMVIMEIPGLLFFSTYTLLVLFWAEIYHQARSLPISKLKPTYCIVNGVMYIIQICIWII 156

Query: 69  ---QHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVT 125
              +H+ G       +         +G L    ++    + FPIESR RQKKLYEVG VT
Sbjct: 157 VMLEHSPGAVIVAKLFFSVVSFSAALGFLIYGGRLFVMLRQFPIESRGRQKKLYEVGCVT 216

Query: 126 GIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYMASF 167
            I  +CF IRC  +A+SAF+K AD DVL++PIL+LIYYMASF
Sbjct: 217 TICFSCFFIRCFVLALSAFDKDADLDVLDHPILNLIYYMASF 258

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356512050|ref|XP_003524734.1| PREDICTED: uncharacterized protein LOC100802255 [Glycine max]

 Score =  147 bits (372), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/159 (50%), Positives = 101/159 (63%), Gaps = 7/159 (4%)

Query: 13  LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQ------ 66
           LE VL+++P LL FSTY LLVLF AEIYHQARS    KLRP+Y+I+N  +Y IQ      
Sbjct: 105 LEQVLMEVPGLLFFSTYALLVLFWAEIYHQARSEPAQKLRPSYFIINGFIYLIQVCLWIY 164

Query: 67  -RKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVT 125
                T    G    +         +G L    ++    + FPIESR RQKKLYEVG VT
Sbjct: 165 MSVSRTAAGLGAAKLFLAVISFFAALGFLLYGGRLFFLLRRFPIESRGRQKKLYEVGSVT 224

Query: 126 GIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM 164
            I CTCFLIRC  +A SAF+++AD DVL++PIL+L+YY+
Sbjct: 225 SICCTCFLIRCALLAFSAFDENADLDVLDHPILNLVYYL 263

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|294461175|gb|ADE76151.1| unknown [Picea sitchensis]

 Score =  147 bits (371), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/159 (52%), Positives = 104/159 (65%), Gaps = 11/159 (6%)

Query: 15  MVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQ-------- 66
           +VLLDLP +L FSTYTLLVLF AEIYHQARSLST KLRPAY+I+N +VYFIQ        
Sbjct: 106 IVLLDLPGILFFSTYTLLVLFWAEIYHQARSLSTEKLRPAYFIINGVVYFIQICIWIYLW 165

Query: 67  -RKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVT 125
               +             S+F    +G L    ++    + FPIES+ R+KKL+EVG VT
Sbjct: 166 IDDSNVSEAIAKLFVAVISFF--AALGFLLYGGRLFLMLRRFPIESKGRRKKLHEVGCVT 223

Query: 126 GIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM 164
            I  TCFLIRC  VA+SAF+  A+ DV+ +PIL+LIYYM
Sbjct: 224 AICFTCFLIRCFVVALSAFDTDANLDVMYHPILNLIYYM 262

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524830|ref|XP_003531031.1| PREDICTED: uncharacterized protein LOC100777331 [Glycine max]

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/161 (49%), Positives = 104/161 (64%), Gaps = 11/161 (6%)

Query: 13  LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQ------ 66
           LE VL+++P LL FSTYTLLVLF AEIYHQARS    KLRP+Y+I+N  +Y IQ      
Sbjct: 106 LEQVLMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAQKLRPSYFIINGFIYLIQVCLWIY 165

Query: 67  ---RKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGF 123
               K          +    S+F    +  L    ++    + FPIESR RQKKLYEVG 
Sbjct: 166 MSVSKTAAGLEAAKLLLAVISFF--AALAFLLYGGRLFFLLRRFPIESRGRQKKLYEVGS 223

Query: 124 VTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM 164
           VT I CTCFLIRC  +A+SAF++++D DVL++PIL+L+YY+
Sbjct: 224 VTSICCTCFLIRCALLALSAFDENSDLDVLDHPILNLMYYL 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646084|gb|ACU23529.1| unknown [Glycine max]

 Score =  144 bits (363), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/161 (49%), Positives = 104/161 (64%), Gaps = 11/161 (6%)

Query: 13  LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQ------ 66
           LE VL+++P LL FSTYTLLVLF AEIYHQARS    KLRP+Y+I+N  +Y IQ      
Sbjct: 106 LEQVLMEVPGLLFFSTYTLLVLFWAEIYHQARSEPAQKLRPSYFIINGFIYLIQVCLWIY 165

Query: 67  ---RKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGF 123
               K          +    S+F    +  L    ++    + FPIESR RQKKLYEVG 
Sbjct: 166 MSVSKTAAGLEAAKLLLAVISFF--AALAFLLYGGRLFFLLRRFPIESRGRQKKLYEVGS 223

Query: 124 VTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM 164
           VT I CTCFLIRC  +A+SAF++++D DVL++PIL+L+YY+
Sbjct: 224 VTSICCTCFLIRCALLALSAFDENSDLDVLDHPILNLMYYL 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	167
TAIR|locus:2119088	291	TOM1 "AT4G21790" [Arabidopsis	0.892	0.512	0.519	5.4e-31
TAIR|locus:2012552	293	THH1 "TOM THREE HOMOLOG 1" [Ar	0.910	0.518	0.471	3.8e-30
TAIR|locus:2051663	303	TOM3 "tobamovirus multiplicati	0.910	0.501	0.459	1e-29

TAIR|locus:2119088 TOM1 "AT4G21790" [Arabidopsis thaliana (taxid:3702)]

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 81/156 (51%), Positives = 99/156 (63%)

Query:    16 VLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRK--QHTRG 73
             VLLDLP LL FS YTLLVLF AEIYHQARSL T+KLR  Y  VN  VY  Q     +   
Sbjct:   106 VLLDLPGLLFFSAYTLLVLFWAEIYHQARSLPTDKLRITYISVNVAVYLAQIGIWAYIWV 165

Query:    74 NTGPWVKYSCSYFI-----LCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVTGIF 128
             +    V+     FI     +  +G L    ++    + FPIES+ R+KKL+EVG VT I 
Sbjct:   166 HDNSTVELVGKIFIAVVSFIAALGFLLYGGRLFFMLRRFPIESKGRRKKLHEVGSVTAIC 225

Query:   129 CTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM 164
              TCFLIRC+ VAVSAF+K    DVL++P+L+LIYYM
Sbjct:   226 FTCFLIRCVVVAVSAFDKDLTLDVLDHPVLNLIYYM 261

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0006914 "autophagy" evidence=RCA

GO:0046786 "viral replication complex formation and maintenance" evidence=IMP

TAIR|locus:2012552 THH1 "TOM THREE HOMOLOG 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 75/159 (47%), Positives = 104/159 (65%)

Query:    13 LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTR 72
             L+ +LLD+PSL  F+TY LLVLF AEIY+QAR++ST+ LRP+++ +NA+VY IQ      
Sbjct:   105 LQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTINAVVYVIQIALWLV 164

Query:    73 GNTGP---WVKYSCSYF----ILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVT 125
                 P    V  S  +F    +   +G L    ++    Q FP+ES+ R+KKL EVG+VT
Sbjct:   165 LWWKPVHLMVIISKMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVT 224

Query:   126 GIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM 164
              I  TCFLIRCI +   AF+ +AD DVL++PIL+ IYY+
Sbjct:   225 TICFTCFLIRCIMMCFDAFDDAADLDVLDHPILNFIYYL 263

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046790 "virion binding" evidence=IPI

TAIR|locus:2051663 TOM3 "tobamovirus multiplication protein 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 73/159 (45%), Positives = 105/159 (66%)

Query:    13 LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTR 72
             L+ +LLD+PSL  F+TY LLVLF AEIY+QAR++ST+ LRP+++ +NA+VY +Q      
Sbjct:   115 LQHILLDIPSLAFFTTYALLVLFWAEIYYQARAVSTDGLRPSFFTINAVVYVVQIALWLV 174

Query:    73 GNTGP---WVKYSCSYF----ILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVT 125
                 P    V  S  +F    +   +G L    ++    Q FP+ES+ R+KKL EVG+VT
Sbjct:   175 LWWKPVRVMVILSKMFFAGVSLFAALGFLLYGGRLFLMLQRFPVESKGRRKKLQEVGYVT 234

Query:   126 GIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYM 164
              I  TCFLIRCI +  +AF++ A+ DVL++PIL+ IYY+
Sbjct:   235 TICFTCFLIRCIMMCFAAFDEGANLDVLDHPILNFIYYL 273


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.331   0.143   0.481    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      167       167   0.00075  108 3  11 21  0.40    31
                                                     30  0.46    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  173 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.49u 0.11s 14.60t   Elapsed:  00:00:01
  Total cpu time:  14.49u 0.11s 14.60t   Elapsed:  00:00:01
  Start:  Mon May 20 21:55:45 2013   End:  Mon May 20 21:55:46 2013

GO:0005739 "mitochondrion" evidence=ISM

GO:0046786 "viral replication complex formation and maintenance" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	167
pfam06454	280	pfam06454, DUF1084, Protein of unknown function (D	1e-46

>gnl|CDD|191530 pfam06454, DUF1084, Protein of unknown function (DUF1084)

 Score =  152 bits (387), Expect = 1e-46
 Identities = 78/163 (47%), Positives = 101/163 (61%), Gaps = 11/163 (6%)

Query: 13  LEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQ------ 66
           L+ +LLDLP L  F+TY LLVLF AEIY+QAR+L T+KLRPA+Y +N +VY IQ      
Sbjct: 92  LQHILLDLPGLAFFTTYALLVLFWAEIYYQARNLPTDKLRPAFYTINGVVYAIQIIIWIL 151

Query: 67  ---RKQHTRGNTGPWVKYSCSYFILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGF 123
                      T        S+     +G L    ++    + FPIES+ R+KKL+EVG 
Sbjct: 152 IWAGPNSAMEITSKIFFAVISFSA--ALGFLLYGGRLFLMLRRFPIESKGRRKKLHEVGS 209

Query: 124 VTGIFCTCFLIRCIAVAVSAFEKSADFDVLNNPILHLIYYMAS 166
           VT I  TCFLIRC+   VSAF+K AD DVL++PIL+LIYY+  
Sbjct: 210 VTAICFTCFLIRCVMFLVSAFDKKADLDVLDHPILNLIYYLLV 252

This family consists of several hypothetical plant specific proteins of unknown function. Length = 280

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	167
PF06454	281	DUF1084: Protein of unknown function (DUF1084); In	100.0

>PF06454 DUF1084: Protein of unknown function (DUF1084); InterPro: IPR009457 This entry consists of several hypothetical plant specific proteins of unknown function

Probab=100.00  E-value=9e-50  Score=342.09  Aligned_cols=164  Identities=45%  Similarity=0.704  Sum_probs=154.8

Q ss_pred             CCcccCChHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHhhcccCCccceeeehhHHHHHhhhheeee---cCCCcch
Q 045433            3 PWAQHGPLHELEMVLLDLPSLLCFSTYTLLVLFSAEIYHQARSLSTNKLRPAYYIVNAIVYFIQRKQHTR---GNTGPWV   79 (167)
Q Consensus         3 ~~v~~~~p~~~~~iL~dlP~llFFStYtlLvLFWAeIYy~A~~~~t~~lrp~f~~iN~vvY~iqi~iwi~---~~~~~~~   79 (167)
                      |.+++.+|++++++|+|+|+++|||||+++++||||||||||+.+++++||.|.++|+++|++|+++|+.   ++++..+
T Consensus        83 ~~~~~~~~~~~~~iL~~lP~~lfFSty~llvlfWaeIy~~ar~~~~~~l~~~~~~iN~~iY~~~i~i~i~~~~~~~~~v~  162 (281)
T PF06454_consen   83 PSVFLIDPNVLDYILNDLPTFLFFSTYTLLVLFWAEIYYQARSVSTDKLRPIFIVINVVIYLFQIIIWILLFFSPSSTVS  162 (281)
T ss_pred             HhhHhcChHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHhheecccchHHH
Confidence            5677889999999999999999999999999999999999999999999999999999999999999999   5556677


Q ss_pred             hhhHHHH----HHHHHHHHHHHHHHHHhhhcCCccchhhhhhheeeeehhhHHHHHhHHHHHHHHHHhcccCCCccccCc
Q 045433           80 KYSCSYF----ILCCIGILDIWWQVICHAQCFPIESRDRQKKLYEVGFVTGIFCTCFLIRCIAVAVSAFEKSADFDVLNN  155 (167)
Q Consensus        80 ~is~~ff----l~aa~~Fl~yG~kL~~~Lrrfp~eSkgr~kkl~eV~~vT~iC~~cFliRc~~~~~sa~~~~~~ldv~~h  155 (167)
                      .+++.++    +++|+||++||+|+|.|+||+|+|||||+||++||+.+|.+|++||++||++++++++|++.|+|+.+|
T Consensus       163 ~i~~~~~A~isli~a~~Fl~YG~~L~~~Lr~~p~~s~~r~kkl~~V~~vt~ic~~cF~ir~i~~~~~~~~~~~~~d~~~~  242 (281)
T PF06454_consen  163 IIYAIFIAVISLIAALGFLYYGGKLFFKLRRFPIESKGRSKKLRKVGFVTIICSVCFLIRCIMVLFSAFDKPANLDVLSH  242 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccccccchhhh
Confidence            7776655    889999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHhhhc
Q 045433          156 PILHLIYYMAS  166 (167)
Q Consensus       156 p~l~~~yy~~~  166 (167)
                      |++|++||.++
T Consensus       243 ~i~~~iyy~i~  253 (281)
T PF06454_consen  243 PILNFIYYFIT  253 (281)
T ss_pred             HHHHHHHHHHH
Confidence            99999999863

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00