Citrus Sinensis ID: 045829

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-
Protein Sequence
MESGGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL
Secondary Structure (PSIPRED)
ccccccccccccccccccEEEEEEEEEEEcccccccEEEEEEEEEEEccccccEEEEEEEEEcccccccEEEEEEEEEcccccEEEEEEEcccEEEEEEEEEcccccEEEEEEEEEccccccEEEEEEEEEEccEEEEEEEEHHcccccccccEEEEEEEc
Secondary Structure Prediction (SSPRO)
ccccccccccHHHHHHHHHHcEEccccccccccccccccEEEEEEEccccccEEEEEEccEcccccccccccccEEEEccccEEEEEEEccccEEEEEEEEcccccEEEEEEEEEEEccccccccEEEEEEcccccHHHHHHHccccccccccEEEEEEEc
Coil and Loop (DISEMBL)
mesgggvpvhpaiaPISYLLgtwrgqgsggyptinafdygeelnfthsggkpviAYTQKtwklgsgepmhaesgywrpnpdgsIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL
Flexible Loop (DISEMBL)
mesgggvpvhpAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQselvgnaskvrevSRVFELVNGELRYVVQMATnhltslrphlkavlrkl
Low Complexity Region (SEG)
MESGGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL
Disordered region (IsUnstruct)
********VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGE*MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHL*******
Disordered Region (DISOPRED)
*****GV**HPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL
Disordered Region (DISEMBL)
********VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL
Disordered Region (DISPRO)
******VPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MESGGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	161	2.2.26 [Sep-21-2011]
O64527	166	UPF0678 fatty acid-bindin	yes	no	0.968	0.939	0.740	2e-62
B2HLY1	161	UPF0678 fatty acid-bindin	yes	no	0.931	0.931	0.426	3e-27
A0PT73	161	UPF0678 fatty acid-bindin	yes	no	0.931	0.931	0.420	7e-27
Q73W27	161	UPF0678 fatty acid-bindin	N/A	no	0.931	0.931	0.414	9e-27
A0QIQ0	161	UPF0678 fatty acid-bindin	yes	no	0.931	0.931	0.407	5e-26
A1T297	164	UPF0678 fatty acid-bindin	yes	no	0.925	0.908	0.412	1e-25
A0R6J8	161	UPF0678 fatty acid-bindin	yes	no	0.937	0.937	0.412	2e-25
Q1BEZ2	175	UPF0678 fatty acid-bindin	yes	no	0.937	0.862	0.379	2e-24
A3PTJ4	175	UPF0678 fatty acid-bindin	yes	no	0.937	0.862	0.379	2e-24
A5U669	164	UPF0678 fatty acid-bindin	yes	no	0.919	0.902	0.386	2e-24

>sp|O64527|Y1926_ARATH UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana GN=At1g79260 PE=1 SV=1

 Score =  237 bits (604), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 117/158 (74%), Positives = 135/158 (85%), Gaps = 2/158 (1%)

Query: 4   GGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKL 63
           G   PVHP +AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL
Sbjct: 11  GESPPVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKL 69

Query: 64  GSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVR 123
            SG PMHAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV+
Sbjct: 70  ESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVK 129

Query: 124 EVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           E+SR FELV+G+L YVV+M+T     L+PHLKA+L KL
Sbjct: 130 EISREFELVDGKLSYVVRMSTT-TNPLQPHLKAILDKL 166

May play a role in the intracellular transport of hydrophobic ligands.
Arabidopsis thaliana (taxid: 3702)

>sp|B2HLY1|Y1995_MYCMM UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=MMAR_1995 PE=3 SV=1

 Score =  120 bits (301), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 67/157 (42%), Positives = 98/157 (62%), Gaps = 7/157 (4%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           +HP +  ++ LLGTW GQGSG YPTI  F+Y EE+ F+H G KP + Y QKT  +  G P
Sbjct: 5   LHPDLDALAPLLGTWAGQGSGEYPTIEPFEYLEEVVFSHVG-KPFLVYAQKTRAVADGAP 63

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQ--SELVG---NASKVR 123
           +HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI+++  +  +G    A +V 
Sbjct: 64  LHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKEVT 123

Query: 124 EVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
            +SR F +V  EL Y ++M    L  L+ HL A LR+
Sbjct: 124 ALSRSFRMVGDELSYRLRMGAVGL-PLQHHLGARLRR 159

May play a role in the intracellular transport of hydrophobic ligands.

Mycobacterium marinum (strain ATCC BAA-535 / M) (taxid: 216594)

>sp|A0PT73|Y3360_MYCUA UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcerans (strain Agy99) GN=MUL_3360 PE=3 SV=1

 Score =  119 bits (299), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 98/157 (62%), Gaps = 7/157 (4%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           +HP +  ++ LLGTW GQG+G YPTI  F+Y EE+ F+H G KP + Y QKT  +  G P
Sbjct: 5   LHPDLDALAPLLGTWAGQGAGEYPTIEPFEYLEEVVFSHVG-KPFLVYAQKTRAVADGTP 63

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQ--SELVG---NASKVR 123
           +HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI+++  +  +G    A +V 
Sbjct: 64  LHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKEVT 123

Query: 124 EVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
            +SR F +V  EL Y ++M    L  L+ HL A LR+
Sbjct: 124 ALSRSFRMVGDELSYRLRMGAVGL-PLQHHLGARLRR 159

May play a role in the intracellular transport of hydrophobic ligands.

Mycobacterium ulcerans (strain Agy99) (taxid: 362242)

>sp|Q73W27|Y2833_MYCPA UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycobacterium paratuberculosis (strain ATCC BAA-968 / K-10) GN=MAP_2833c PE=3 SV=1

 Score =  119 bits (298), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 7/157 (4%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           +HP +A ++ LLGTW G+GSG YPTI  FDY EE+ F+H G KP +AY QKT     G+P
Sbjct: 5   LHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVG-KPFLAYAQKTRAAADGKP 63

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASKVR 123
           +HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I+++       L  +A +V 
Sbjct: 64  LHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPSAKEVT 123

Query: 124 EVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
            ++R F +   EL Y VQM       L+ HL AVL +
Sbjct: 124 ALARWFRIDGDELSYSVQMGAVG-QPLQDHLAAVLHR 159

May play a role in the intracellular transport of hydrophobic ligands.

Mycobacterium paratuberculosis (taxid: 1770)

>sp|A0QIQ0|Y3611_MYCA1 UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium (strain 104) GN=MAV_3611 PE=3 SV=1

 Score =  116 bits (291), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 64/157 (40%), Positives = 93/157 (59%), Gaps = 7/157 (4%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           +HP +A ++ LLGTW G+GSG YPTI  FDY EE+ F+H G KP +AY QKT     G+P
Sbjct: 5   LHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVG-KPFLAYAQKTRAAADGKP 63

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASKVR 123
           +HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I+++       L   A +V 
Sbjct: 64  LHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPTAKEVT 123

Query: 124 EVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
            + R F +   +L Y VQM       L+ HL AVL +
Sbjct: 124 ALGRWFRIDGDKLSYSVQMGAVG-QPLQDHLAAVLHR 159

May play a role in the intracellular transport of hydrophobic ligands.

Mycobacterium avium (strain 104) (taxid: 243243)

>sp|A1T297|Y449_MYCVP UPF0678 fatty acid-binding protein-like protein Mvan_0449 OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=Mvan_0449 PE=3 SV=1

 Score =  115 bits (288), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 94/160 (58%), Gaps = 11/160 (6%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           +HP +A ++ LLGTW G+GSG YPTI  F Y EE+ F H G KP + Y Q+T     G P
Sbjct: 8   LHPDVAALAPLLGTWVGEGSGEYPTIEPFGYTEEITFGHVG-KPFLTYAQRTRAADDGRP 66

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELV-------GNASK 121
           +HAE+GY R +    IE ++A  TG+ E+Q+G   A+   +++  ELV       G+A +
Sbjct: 67  LHAETGYLRASAPDRIEWILAHPTGITEIQEGQLTADGDGLRM--ELVSSSIGRSGSAKE 124

Query: 122 VREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           V +V R  EL    L Y ++MA      L+ HL AVLR++
Sbjct: 125 VTDVGRSIELRGDTLTYTLRMAAVG-QPLQHHLSAVLRRV 163

May play a role in the intracellular transport of hydrophobic ligands.

Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) (taxid: 350058)

>sp|A0R6J8|Y6574_MYCS2 UPF0678 fatty acid-binding protein-like protein MSMEG_6574/MSMEI_6396 OS=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_6574 PE=3 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 91/160 (56%), Gaps = 9/160 (5%)

Query: 7   VPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG 66
           + +HP IAP++ LLGTW G G+G YPTI +F+Y EE+ F H  GKP + Y Q+T     G
Sbjct: 2   IDLHPNIAPLAPLLGTWAGPGAGEYPTIQSFEYLEEITFGHV-GKPFLTYQQRTKARDDG 60

Query: 67  EPMHAESGYWR-PNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNAS 120
            P+HAE GY R P PD  +E V+A  TG+ E+Q+GT       I +  +     L  +A 
Sbjct: 61  RPLHAEVGYIRVPAPD-RVEWVLAHPTGITEIQEGTLTVGGDRITMDVKATTIGLTASAK 119

Query: 121 KVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
            V  ++R F +   EL Y +QM       L+ HL A LR+
Sbjct: 120 NVTALARSFRITGDELTYTLQMGAVG-QPLQHHLAATLRR 158

May play a role in the intracellular transport of hydrophobic ligands.

Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) (taxid: 246196)

>sp|Q1BEZ2|Y421_MYCSS UPF0678 fatty acid-binding protein-like protein Mmcs_0421 OS=Mycobacterium sp. (strain MCS) GN=Mmcs_0421 PE=3 SV=1

 Score =  111 bits (278), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 7/158 (4%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           VHP +  ++ LLGTW G+GSG YPTI  FDY EE+ F H+ GKP + Y Q+T     G P
Sbjct: 18  VHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHT-GKPFLTYVQRTRAADDGRP 76

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQ--SELVGNASKVRE-- 124
           +HAE+GY R     ++E ++A  TG+ E+Q+G   A+   +++   S  +G +   +E  
Sbjct: 77  LHAETGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMDLISTDIGRSESAKEVM 136

Query: 125 -VSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
            V R  ++    L Y ++MA      L+ HL AVL ++
Sbjct: 137 AVGRSMQISGDTLTYTLRMAAVG-RPLQHHLSAVLHRV 173

May play a role in the intracellular transport of hydrophobic ligands.

Mycobacterium sp. (strain MCS) (taxid: 164756)

>sp|A3PTJ4|Y408_MYCSJ UPF0678 fatty acid-binding protein-like protein Mjls_0408 OS=Mycobacterium sp. (strain JLS) GN=Mjls_0408 PE=3 SV=1

 Score =  111 bits (278), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 7/158 (4%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           VHP +  ++ LLGTW G+GSG YPTI  FDY EE+ F H+ GKP + Y Q+T     G P
Sbjct: 18  VHPDLTALAPLLGTWSGKGSGEYPTIEPFDYTEEITFGHT-GKPFLTYVQRTRAADDGRP 76

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQ--SELVGNASKVRE-- 124
           +HAE+GY R     ++E ++A  TG+ E+Q+G   A+   +++   S  +G +   +E  
Sbjct: 77  LHAETGYLRAPTPNNVEWILAHPTGITEIQEGPLTADGDTLRMDLISTDIGRSESAKEVM 136

Query: 125 -VSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
            V R  ++    L Y ++MA      L+ HL AVL ++
Sbjct: 137 AVGRSMQISGDTLTYTLRMAAVG-RPLQHHLSAVLHRV 173

May play a role in the intracellular transport of hydrophobic ligands.

Mycobacterium sp. (strain JLS) (taxid: 164757)

>sp|A5U669|Y2745_MYCTA UPF0678 fatty acid-binding protein-like protein MRA_2745 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_2745 PE=3 SV=1

 Score =  111 bits (277), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 92/158 (58%), Gaps = 10/158 (6%)

Query: 11  PAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMH 70
           PA+  +S LLG+W G+G+G YPTI  F+Y EE+ F H G KP + YTQ+T  +  G+P+H
Sbjct: 7   PALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLH 65

Query: 71  AESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE--------LVGNASKV 122
           +E+GY R    G +E+V+A  +G+ E++ GTY+    VI+L+          L   A +V
Sbjct: 66  SETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEV 125

Query: 123 REVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
             + R + +   EL Y +QM       L+ HL AVL +
Sbjct: 126 TALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162

May play a role in the intracellular transport of hydrophobic ligands.

Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) (taxid: 419947)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
147857570	164	hypothetical protein VITISV_001330 [Viti	0.937	0.920	0.836	9e-69
449444310	170	PREDICTED: UPF0678 fatty acid-binding pr	0.937	0.888	0.803	8e-67
224112357	163	predicted protein [Populus trichocarpa]	0.944	0.932	0.784	4e-66
351725737	168	uncharacterized protein LOC100306509 [Gl	0.944	0.904	0.784	5e-66
356557086	168	PREDICTED: UPF0678 fatty acid-binding pr	0.944	0.904	0.771	5e-65
297839787	167	hypothetical protein ARALYDRAFT_316819 [	0.993	0.958	0.722	8e-61
18412314	166	uncharacterized protein [Arabidopsis tha	0.968	0.939	0.740	1e-60
218188843	179	hypothetical protein OsI_03268 [Oryza sa	0.993	0.893	0.676	1e-59
226503922	167	LOC100282456 [Zea mays] gi|195622536|gb|	0.944	0.910	0.679	2e-59
73536052	166	Chain A, X-Ray Structure Of Protein From	0.968	0.939	0.727	5e-59

>gi|147857570|emb|CAN83082.1| hypothetical protein VITISV_001330 [Vitis vinifera] gi|297736088|emb|CBI24126.3| unnamed protein product [Vitis vinifera]

 Score =  264 bits (675), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 128/153 (83%), Positives = 142/153 (92%), Gaps = 2/153 (1%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           VHPAI P+SYLLGTWRGQG GG+PTIN+F YGEEL F+HSG KPVIAY+Q+TWKL SGEP
Sbjct: 14  VHPAIQPLSYLLGTWRGQGEGGFPTINSFSYGEELLFSHSG-KPVIAYSQRTWKLSSGEP 72

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRV 128
           MHAESGYWRP PDG+IEVVIAQSTGLVEVQKGTYNAEEK++KLQSELVGNASKV E+SRV
Sbjct: 73  MHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKLVKLQSELVGNASKVTEISRV 132

Query: 129 FELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           FELVNGEL YVVQMATN L SL+PHLKA+L+K+
Sbjct: 133 FELVNGELSYVVQMATN-LNSLQPHLKALLKKI 164

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449444310|ref|XP_004139918.1| PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260-like isoform 1 [Cucumis sativus] gi|449444312|ref|XP_004139919.1| PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260-like isoform 2 [Cucumis sativus] gi|449525114|ref|XP_004169564.1| PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260-like isoform 1 [Cucumis sativus] gi|449525116|ref|XP_004169565.1| PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260-like isoform 2 [Cucumis sativus]

 Score =  258 bits (658), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 123/153 (80%), Positives = 142/153 (92%), Gaps = 2/153 (1%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           +HPA+ P+S+LLGTWRG+G GG+PTIN+F YGEEL+F+HSG KPVI+Y+QKTWKL S EP
Sbjct: 20  IHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG-KPVISYSQKTWKLDSKEP 78

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRV 128
           MHAESGYWRP PDG+IEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKV+E+SRV
Sbjct: 79  MHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVKEISRV 138

Query: 129 FELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           F+LV+GEL YVVQMAT  LTSL+PHLKA+L K+
Sbjct: 139 FKLVDGELSYVVQMATT-LTSLQPHLKALLTKV 170

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224112357|ref|XP_002316162.1| predicted protein [Populus trichocarpa] gi|222865202|gb|EEF02333.1| predicted protein [Populus trichocarpa]

 Score =  255 bits (652), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 120/153 (78%), Positives = 138/153 (90%), Gaps = 1/153 (0%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           VHP I P+SYLLGTWRGQG GGYPTIN+F YGEEL+F+ + GKPVIAY QKTWKL SGEP
Sbjct: 12  VHPVIVPLSYLLGTWRGQGEGGYPTINSFSYGEELHFSSNPGKPVIAYNQKTWKLNSGEP 71

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRV 128
           MHAESGYWRP PDG+IEVVIAQSTG+VEVQKGTYN ++K IKLQS+LVGNASKV+E++R 
Sbjct: 72  MHAESGYWRPKPDGTIEVVIAQSTGIVEVQKGTYNTQDKTIKLQSQLVGNASKVKEITRD 131

Query: 129 FELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           FELVNG+L YVVQMATN LT ++PHLKA+L+KL
Sbjct: 132 FELVNGDLSYVVQMATN-LTGIQPHLKALLKKL 163

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351725737|ref|NP_001236079.1| uncharacterized protein LOC100306509 [Glycine max] gi|255628739|gb|ACU14714.1| unknown [Glycine max]

 Score =  255 bits (651), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 120/153 (78%), Positives = 137/153 (89%), Gaps = 1/153 (0%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           +HPA+APISYLLGTWRGQG GG+PTIN+F YGEEL+F+HS  KPVI YTQKTWKL SGEP
Sbjct: 17  IHPAVAPISYLLGTWRGQGEGGFPTINSFSYGEELHFSHSPNKPVIGYTQKTWKLSSGEP 76

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRV 128
           MHAESGYWRP PDG+IEVVIAQS GLVEVQKGTY+AEEKVI+LQSE+VGNASKV+E+ R 
Sbjct: 77  MHAESGYWRPKPDGTIEVVIAQSNGLVEVQKGTYSAEEKVIQLQSEIVGNASKVKEIRRC 136

Query: 129 FELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           F+LV+G L Y VQMATN +T L+PHLKA L+KL
Sbjct: 137 FQLVDGNLCYDVQMATNKIT-LQPHLKASLKKL 168

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557086|ref|XP_003546849.1| PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260-like [Glycine max]

 Score =  251 bits (642), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 118/153 (77%), Positives = 136/153 (88%), Gaps = 1/153 (0%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           +HPA+AP+SYLLGTWRGQG GG+PTIN+F YGEEL+F+HS  KPVI YTQKTWKL SGEP
Sbjct: 17  IHPAVAPLSYLLGTWRGQGEGGFPTINSFSYGEELHFSHSPSKPVIGYTQKTWKLSSGEP 76

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRV 128
           MHAESGYWRP PDG+IEVVIAQS GLVEVQKGTY+AEEK+I LQSE+VGNASKV+E+ R 
Sbjct: 77  MHAESGYWRPKPDGTIEVVIAQSNGLVEVQKGTYSAEEKMIHLQSEIVGNASKVKEIRRC 136

Query: 129 FELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           F+LV+G L Y VQMATN +T L+PHLKA L+KL
Sbjct: 137 FQLVDGNLCYDVQMATNTIT-LQPHLKASLKKL 168

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297839787|ref|XP_002887775.1| hypothetical protein ARALYDRAFT_316819 [Arabidopsis lyrata subsp. lyrata] gi|297333616|gb|EFH64034.1| hypothetical protein ARALYDRAFT_316819 [Arabidopsis lyrata subsp. lyrata]

 Score =  238 bits (606), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 117/162 (72%), Positives = 137/162 (84%), Gaps = 2/162 (1%)

Query: 1   MESGGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKT 60
           +E+   +PVHP +AP+SYLLGTWRGQG G YPTI +F YGEEL F+HSG KPVI+YTQ+T
Sbjct: 7   VENPRPIPVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEELRFSHSG-KPVISYTQRT 65

Query: 61  WKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNAS 120
           WKL SG PMHAESGY+RPNPDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNAS
Sbjct: 66  WKLESGAPMHAESGYFRPNPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNAS 125

Query: 121 KVREVSRVFELVNGELRYVVQMATNHLTS-LRPHLKAVLRKL 161
           KV+E+SR F+LVNG+L YVV M+T      L PHLKA+L KL
Sbjct: 126 KVKEISREFQLVNGKLSYVVHMSTTTTNPLLHPHLKAILDKL 167

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412314|ref|NP_565204.1| uncharacterized protein [Arabidopsis thaliana] gi|75099080|sp|O64527.1|Y1926_ARATH RecName: Full=UPF0678 fatty acid-binding protein-like protein At1g79260 gi|209447558|pdb|3EMM|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At1g79260 With Bound Heme gi|3152558|gb|AAC17039.1| Similar to M. tuberculosis gene gb|Z96072 and M. leprae gene gb|400019 [Arabidopsis thaliana] gi|15081628|gb|AAK82469.1| At1g79260/YUP8H12R_40 [Arabidopsis thaliana] gi|27363314|gb|AAO11576.1| At1g79260/YUP8H12R_40 [Arabidopsis thaliana] gi|332198103|gb|AEE36224.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  237 bits (604), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 117/158 (74%), Positives = 135/158 (85%), Gaps = 2/158 (1%)

Query: 4   GGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKL 63
           G   PVHP +AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL
Sbjct: 11  GESPPVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKL 69

Query: 64  GSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVR 123
            SG PMHAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV+
Sbjct: 70  ESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVK 129

Query: 124 EVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           E+SR FELV+G+L YVV+M+T     L+PHLKA+L KL
Sbjct: 130 EISREFELVDGKLSYVVRMSTT-TNPLQPHLKAILDKL 166

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218188843|gb|EEC71270.1| hypothetical protein OsI_03268 [Oryza sativa Indica Group]

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 111/164 (67%), Positives = 138/164 (84%), Gaps = 4/164 (2%)

Query: 1   MESGGGV-PV--HPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYT 57
           ME GG   P   HPA+AP+++LLG WRG+G G +PTI+ F YGEEL F+H   KPVI+YT
Sbjct: 17  MEGGGATAPTAPHPAVAPLAFLLGKWRGEGEGSFPTISPFRYGEELLFSHHPSKPVISYT 76

Query: 58  QKTWKLGSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVG 117
           Q+TWK  SGEPMHAESGYWRP PDGS+EVVI+QSTGL EVQKG+++AE+K + LQSELVG
Sbjct: 77  QRTWKAASGEPMHAESGYWRPRPDGSVEVVISQSTGLAEVQKGSFDAEKKTVTLQSELVG 136

Query: 118 NASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           NASKV++++RVF+LV+GEL YVVQMAT   TSL+PHLKA+L+K+
Sbjct: 137 NASKVKQITRVFQLVDGELSYVVQMATI-TTSLQPHLKALLKKI 179

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|226503922|ref|NP_001148838.1| LOC100282456 [Zea mays] gi|195622536|gb|ACG33098.1| THAP domain-containing protein 4 [Zea mays] gi|414881005|tpg|DAA58136.1| TPA: THAP domain-containing protein 4 [Zea mays]

 Score =  233 bits (594), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 104/153 (67%), Positives = 132/153 (86%), Gaps = 1/153 (0%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
            HPA+AP+++LLG WRG+G G +PTI++F YGEEL F+H   KPVI+YTQKTWK  SGEP
Sbjct: 16  THPAVAPLAFLLGKWRGEGEGSFPTISSFRYGEELLFSHHPSKPVISYTQKTWKTASGEP 75

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRV 128
           MHAESGYWRP PDGS++VVIAQSTGL EVQKG+++AE+K + LQSELVGNASKV++++R 
Sbjct: 76  MHAESGYWRPRPDGSVDVVIAQSTGLAEVQKGSFDAEKKTVTLQSELVGNASKVKQITRT 135

Query: 129 FELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           F++ +GEL YVVQMAT   TSL+PHLKA+LR++
Sbjct: 136 FQVADGELSYVVQMATI-TTSLQPHLKALLRRI 167

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|73536052|pdb|2A13|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At1g79260 gi|150261514|pdb|2Q4N|A Chain A, Ensemble Refinement Of The Crystal Structure Of Protein From Arabidopsis Thaliana At1g79260

 Score =  231 bits (590), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 115/158 (72%), Positives = 133/158 (84%), Gaps = 2/158 (1%)

Query: 4   GGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKL 63
           G   PVHP +AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL
Sbjct: 11  GESPPVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKL 69

Query: 64  GSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVR 123
            SG P HAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV+
Sbjct: 70  ESGAPXHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVK 129

Query: 124 EVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           E+SR FELV+G+L YVV+ +T     L+PHLKA+L KL
Sbjct: 130 EISREFELVDGKLSYVVRXSTT-TNPLQPHLKAILDKL 166

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	161
TAIR|locus:2207465	166	AT1G79260 "AT1G79260" [Arabido	0.968	0.939	0.740	5.7e-59
DICTYBASE|DDB_G0274025	159	DDB_G0274025 "DUF1794 family p	0.906	0.918	0.397	3.3e-24
DICTYBASE|DDB_G0272614	159	DDB_G0272614 "DUF1794 family p	0.906	0.918	0.397	3.3e-24
UNIPROTKB|Q8WY91	577	THAP4 "THAP domain-containing	0.937	0.261	0.337	5.2e-18
UNIPROTKB|F1NW56	500	F1NW56 "Uncharacterized protei	0.937	0.302	0.337	1e-17
RGD|1359473	569	Thap4 "THAP domain containing	0.937	0.265	0.325	1.8e-17
UNIPROTKB|F1MT64	559	THAP4 "THAP domain-containing	0.925	0.266	0.341	2.2e-17
MGI|MGI:1914276	569	Thap4 "THAP domain containing	0.937	0.265	0.325	2.9e-17
UNIPROTKB|Q2TBI2	584	THAP4 "THAP domain-containing	0.925	0.255	0.341	3.1e-17
UNIPROTKB|F1PC56	553	THAP4 "Uncharacterized protein	0.937	0.273	0.331	4.5e-17

TAIR|locus:2207465 AT1G79260 "AT1G79260" [Arabidopsis thaliana (taxid:3702)]

 Score = 605 (218.0 bits), Expect = 5.7e-59, P = 5.7e-59
 Identities = 117/158 (74%), Positives = 135/158 (85%)

Query:     4 GGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKL 63
             G   PVHP +AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL
Sbjct:    11 GESPPVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKL 69

Query:    64 GSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVR 123
              SG PMHAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV+
Sbjct:    70 ESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVK 129

Query:   124 EVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
             E+SR FELV+G+L YVV+M+T     L+PHLKA+L KL
Sbjct:   130 EISREFELVDGKLSYVVRMSTT-TNPLQPHLKAILDKL 166

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005829 "cytosol" evidence=IDA

DICTYBASE|DDB_G0274025 DDB_G0274025 "DUF1794 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 62/156 (39%), Positives = 87/156 (55%)

Query:    13 IAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAE 72
             I+ +SYLLG ++G G G YPTI  F Y EE+ F+++G KP I Y QKTW + +G+P+H+E
Sbjct:     4 ISKVSYLLGKFKGSGKGEYPTITPFTYTEEIEFSNNG-KPFIFYQQKTWNV-NGQPLHSE 61

Query:    73 SGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEE------KVIKLQSELVGNASKVREVS 126
             SGY R  P+G +E+VI++ TG+ E+  G    E       K+  +Q            V 
Sbjct:    62 SGYMRFPPNGKVELVISEPTGINEIYDGEITGENNEILTFKLTNIQRTPTAKPPHTTNVI 121

Query:   127 R--VFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
             R   F+     L Y + MAT   T L  HL A L+K
Sbjct:   122 RKFTFDQSANTLSYTMDMATTTTTDLTHHLSATLQK 157

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

DICTYBASE|DDB_G0272614 DDB_G0272614 "DUF1794 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
 Identities = 62/156 (39%), Positives = 87/156 (55%)

Query:    13 IAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAE 72
             I+ +SYLLG ++G G G YPTI  F Y EE+ F+++G KP I Y QKTW + +G+P+H+E
Sbjct:     4 ISKVSYLLGKFKGSGKGEYPTITPFTYTEEIEFSNNG-KPFIFYQQKTWNV-NGQPLHSE 61

Query:    73 SGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEE------KVIKLQSELVGNASKVREVS 126
             SGY R  P+G +E+VI++ TG+ E+  G    E       K+  +Q            V 
Sbjct:    62 SGYMRFPPNGKVELVISEPTGINEIYDGEITGENNEILTFKLTNIQRTPTAKPPHTTNVI 121

Query:   127 R--VFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
             R   F+     L Y + MAT   T L  HL A L+K
Sbjct:   122 RKFTFDQSANTLSYTMDMATTTTTDLTHHLSATLQK 157

GO:0008150 "biological_process" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0003674 "molecular_function" evidence=ND

UNIPROTKB|Q8WY91 THAP4 "THAP domain-containing protein 4" [Homo sapiens (taxid:9606)]

 Score = 227 (85.0 bits), Expect = 5.2e-18, P = 5.2e-18
 Identities = 54/160 (33%), Positives = 91/160 (56%)

Query:     9 VHPAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG 66
             ++P + P+S++LGTW     G+G YPT+  F Y EE++ +H G +P++ ++  ++   + 
Sbjct:   418 MNPVVEPLSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVG-QPMLNFSFNSFHPDTR 476

Query:    67 EPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-ELVGNASK--V 122
             +PMH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  I   S   +  A +  V
Sbjct:   477 KPMHRECGFIRLKPDTNKVAFVSAQNTGVVEVEEGEVNGQELCIASHSIARISFAKEPHV 536

Query:   123 REVSRVFELVN-GELRYVVQMATNHLTSLRPHLKAVLRKL 161
              +++R F L + G+L   V MAT     +  HL    +K+
Sbjct:   537 EQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHVTYKKV 575

GO:0003677 "DNA binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1NW56 F1NW56 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 223 (83.6 bits), Expect = 1.0e-17, P = 1.0e-17
 Identities = 54/160 (33%), Positives = 89/160 (55%)

Query:     9 VHPAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG 66
             ++P + P+S++LGTW     G G +PT+  F Y EE++ +H G +P++ ++   +   + 
Sbjct:   341 LNPVMEPLSWMLGTWLSDPPGDGTFPTMKPFQYLEEVHISHVG-QPMLNFSFNAFHPDTR 399

Query:    67 EPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-ELVGNASK--V 122
             +PMH E G+ R  PD   +  + AQ+TGLVEV++G  N +E  I   S   +  A K  V
Sbjct:   400 KPMHRECGFIRLKPDTNKVAFISAQNTGLVEVEEGEVNGQELSIASHSIARISFAKKPHV 459

Query:   123 REVSRVFEL-VNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
              +++R F L  +G+L   V MAT     +  HL    +K+
Sbjct:   460 EQITRKFRLNSDGKLEQTVSMATT-TQPMTQHLHITYKKV 498

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|1359473 Thap4 "THAP domain containing 4" [Rattus norvegicus (taxid:10116)]

 Score = 222 (83.2 bits), Expect = 1.8e-17, P = 1.8e-17
 Identities = 52/160 (32%), Positives = 92/160 (57%)

Query:     9 VHPAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG 66
             ++P + P+S++LGTW  +  G G +PT+  F Y EE++ +H G +P++ ++  ++   + 
Sbjct:   410 LNPVVEPLSWMLGTWLSEPPGVGTFPTLQPFQYLEEVHISHVG-QPMLNFSFNSFHPETH 468

Query:    67 EPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-ELVGNASK--V 122
             +PMH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  +   S   +  A +  V
Sbjct:   469 KPMHRECGFIRLKPDTNKVAFVSAQNTGVVEVEEGEVNGQELCVSSHSISRISFAKEPHV 528

Query:   123 REVSRVFELVN-GELRYVVQMATNHLTSLRPHLKAVLRKL 161
             ++++R F L + G+L   V MAT     +  HL    +K+
Sbjct:   529 QQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHITYKKV 567

GO:0003677 "DNA binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1MT64 THAP4 "THAP domain-containing protein 4" [Bos taurus (taxid:9913)]

 Score = 221 (82.9 bits), Expect = 2.2e-17, P = 2.2e-17
 Identities = 54/158 (34%), Positives = 88/158 (55%)

Query:    11 PAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
             P + P+S++LGTW  +  G+G +PT+  F Y EE + +H G +P++ ++   +   + +P
Sbjct:   402 PVVEPLSWMLGTWLSEPPGAGTFPTLQPFRYLEEAHISHVG-QPMLNFSFNAFHPDTHKP 460

Query:    69 MHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-ELVGNASK--VRE 124
             MH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  I   S   +  A +  V +
Sbjct:   461 MHRECGFIRLEPDTNKVAFVSAQNTGIVEVEEGEVNGQELCIASHSIARISFAKEPHVEQ 520

Query:   125 VSRVFELVN-GELRYVVQMATNHLTSLRPHLKAVLRKL 161
             ++R F L + G+L   V MAT     L  HL    +K+
Sbjct:   521 ITRKFRLNSEGKLEQTVSMATT-TQPLTQHLHVTYKKV 557

GO:0003676 "nucleic acid binding" evidence=IEA

MGI|MGI:1914276 Thap4 "THAP domain containing 4" [Mus musculus (taxid:10090)]

 Score = 220 (82.5 bits), Expect = 2.9e-17, P = 2.9e-17
 Identities = 52/160 (32%), Positives = 90/160 (56%)

Query:     9 VHPAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG 66
             ++P + P+S++LGTW     G G +PT+  F Y EE++ +H G +P++ ++  ++   + 
Sbjct:   410 LNPVVEPLSWMLGTWLSDPPGVGTFPTLQPFQYLEEVHISHVG-QPMLNFSFNSFHPETH 468

Query:    67 EPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-ELVGNASK--V 122
             +PMH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  +   S   +  A +  V
Sbjct:   469 KPMHRECGFIRLKPDTNKVAFVSAQNTGIVEVEEGEVNGQELCVSSHSVSRISFAKEPHV 528

Query:   123 REVSRVFELVN-GELRYVVQMATNHLTSLRPHLKAVLRKL 161
              +++R F L + G+L   V MAT     +  HL    +K+
Sbjct:   529 EQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHITYKKV 567

GO:0003674 "molecular_function" evidence=ND

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|Q2TBI2 THAP4 "THAP domain-containing protein 4" [Bos taurus (taxid:9913)]

 Score = 220 (82.5 bits), Expect = 3.1e-17, P = 3.1e-17
 Identities = 54/158 (34%), Positives = 87/158 (55%)

Query:    11 PAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
             P + P+S++LGTW  +  G+G +PT+  F Y EE + +H G +P++ ++   +   + +P
Sbjct:   427 PVVEPLSWMLGTWLSEPPGAGTFPTLQPFRYLEEAHISHVG-QPMLNFSFNAFHPDTHKP 485

Query:    69 MHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-ELVGNASK--VRE 124
             MH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  I   S   +  A +  V +
Sbjct:   486 MHRECGFIRLEPDTNKVAFVSAQNTGIVEVEEGEVNGQELCIASHSIARISFAKEPHVEQ 545

Query:   125 VSRVFELVN-GELRYVVQMATNHLTSLRPHLKAVLRKL 161
             ++R F L + G L   V MAT     L  HL    +K+
Sbjct:   546 ITRKFRLNSEGNLEQTVSMATT-TQPLTQHLHVTYKKV 582

GO:0046872 "metal ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1PC56 THAP4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 218 (81.8 bits), Expect = 4.5e-17, P = 4.5e-17
 Identities = 53/160 (33%), Positives = 89/160 (55%)

Query:     9 VHPAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG 66
             ++P + P+S++LGTW     G+G +PT+  F Y EE+  +H G +PV+ ++   +   + 
Sbjct:   394 MNPVVEPLSWMLGTWLSDPPGAGTFPTLQPFQYLEEVCISHVG-QPVLNFSFNAFHPDTR 452

Query:    67 EPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-ELVGNASK--V 122
             +PMH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  I   S   +  A +  V
Sbjct:   453 KPMHRECGFIRLKPDTNKVAFVSAQNTGIVEVEEGEVNGQELCITSHSIARISFAKEPHV 512

Query:   123 REVSRVFELVN-GELRYVVQMATNHLTSLRPHLKAVLRKL 161
              +++R F L + G+L   V MAT     +  HL    +++
Sbjct:   513 EQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHITYKRV 551

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A1KM55	Y2730_MYCBP	No assigned EC number	0.3860	0.9192	0.9024	yes	no
Q47KW7	Y2872_THEFY	No assigned EC number	0.3089	0.9068	0.8156	yes	no
A4T0W5	Y302_MYCGI	No assigned EC number	0.3742	0.9440	0.9156	yes	no
A6W6D1	Y882_KINRD	No assigned EC number	0.3157	0.9006	0.8055	yes	no
A0QIQ0	Y3611_MYCA1	No assigned EC number	0.4076	0.9316	0.9316	yes	no
A5U669	Y2745_MYCTA	No assigned EC number	0.3860	0.9192	0.9024	yes	no
Q0S4V4	Y5653_RHOSR	No assigned EC number	0.3815	0.8819	0.8068	yes	no
O07216	Y2717_MYCTU	No assigned EC number	0.3860	0.9192	0.9024	yes	no
Q82ND8	Y1365_STRAW	No assigned EC number	0.3333	0.9192	0.8222	yes	no
Q2JFV4	Y452_FRASC	No assigned EC number	0.3176	0.9378	0.8031	yes	no
Q7TY17	Y2736_MYCBO	No assigned EC number	0.3860	0.9192	0.9024	yes	no
A0PT73	Y3360_MYCUA	No assigned EC number	0.4203	0.9316	0.9316	yes	no
A1SPL4	Y4252_NOCSJ	No assigned EC number	0.3566	0.9068	0.8902	yes	no
Q9CCB8	Y1006_MYCLE	No assigned EC number	0.3806	0.9192	0.9192	yes	no
O64527	Y1926_ARATH	No assigned EC number	0.7405	0.9689	0.9397	yes	no
A3PTJ4	Y408_MYCSJ	No assigned EC number	0.3797	0.9378	0.8628	yes	no
A0R6J8	Y6574_MYCS2	No assigned EC number	0.4125	0.9378	0.9378	yes	no
Q5YS78	Y4114_NOCFA	No assigned EC number	0.3875	0.9378	0.8988	yes	no
A1T297	Y449_MYCVP	No assigned EC number	0.4125	0.9254	0.9085	yes	no
B2HLY1	Y1995_MYCMM	No assigned EC number	0.4267	0.9316	0.9316	yes	no
Q1BEZ2	Y421_MYCSS	No assigned EC number	0.3797	0.9378	0.8628	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00002128001 SubName- Full=Putative uncharacterized protein (Chromosome chr19 scaffold_126, whole genome shotgun sequence); (164 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	161
pfam08768	155	pfam08768, DUF1794, Domain of unknown function (DU	9e-54
cd07828	148	cd07828, nitrobindin, nitrobindin heme-binding dom	7e-51

>gnl|CDD|220010 pfam08768, DUF1794, Domain of unknown function (DUF1794)

 Score =  167 bits (424), Expect = 9e-54
 Identities = 65/157 (41%), Positives = 96/157 (61%), Gaps = 10/157 (6%)

Query: 11  PAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGE--P 68
           P + P++ LLGTW G+G G YPTI  F YGEE+ F+H  G+P + Y  +TW L  GE  P
Sbjct: 1   PELGPLAPLLGTWEGEGVGVYPTIEPFTYGEEIEFSH-DGRPFLLYGSRTWALDDGEDRP 59

Query: 69  MHAESGYWRPNPDGS-IEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREV-- 125
           +H E+GYWR +PD   +E+++A   G+VE+ +G    +   I+L+++ +G     +EV  
Sbjct: 60  LHDETGYWRWDPDTGEVELLLAHPRGIVEIAEGEA-VDGPRIELRTDGIGRTPFAKEVTA 118

Query: 126 -SRVFELV-NGELRYVVQMATNHLTSLRPHLKAVLRK 160
             R++ LV +G L Y V MAT     L+ HL A LR+
Sbjct: 119 YKRLYGLVDDGTLSYTVDMATVG-GPLQHHLSARLRR 154

This domain forms a beta barrel structure but the function is unknown. The GO annotation for this protein indicates that the protein has a function in nematode larval development and has a positive regulation on growth rate. Length = 155

>gnl|CDD|143652 cd07828, nitrobindin, nitrobindin heme-binding domain

 Score =  159 bits (404), Expect = 7e-51
 Identities = 63/151 (41%), Positives = 95/151 (62%), Gaps = 8/151 (5%)

Query: 14  APISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAES 73
            P+++LLGTW G+G GGYPTI  F YGEE+ F+H G  P + YT +TW+L  G P+H E+
Sbjct: 2   GPLAWLLGTWEGKGVGGYPTIEEFTYGEEITFSHDGQ-PFLNYTSRTWRLDDGRPLHRET 60

Query: 74  GYWRPNPDG-SIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGN---ASKVREVSRVF 129
           G+WR +PD   +E+++A  TG+VE+++G     +  ++L ++ V     A +V    R++
Sbjct: 61  GFWRIDPDTGEVELLLAHPTGVVEIEEGEVRGTQ--LELTTDAVARTSFAPEVTAAKRLY 118

Query: 130 ELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
            LV+G L Y V MAT     L  HL A L++
Sbjct: 119 GLVDGTLSYTVDMATVG-QPLTHHLSARLKR 148

Nitrobindin is a heme-containing lipocalin that may reversibly bind nitric oxide. This heme-binding domain forms a beta barrel structure, and in a small family of proteins from tetrapods, it is found C-terminal to a THAP zinc finger domain (a sequence-specific DNA binding domain). Members of this group are putatively related to fatty acid-binding proteins (FABPs). Length = 148

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	161
cd07828	148	nitrobindin nitrobindin heme-binding domain. Nitro	100.0
PF08768	154	DUF1794: Domain of unknown function (DUF1794); Int	100.0
KOG3371	243	consensus Uncharacterized conserved protein [Funct	100.0
COG5514	203	Uncharacterized conserved protein [Function unknow	99.57
PF07617	159	DUF1579: Protein of unknown function (DUF1579); In	97.66

>cd07828 nitrobindin nitrobindin heme-binding domain

Probab=100.00  E-value=2.8e-53  Score=326.72  Aligned_cols=144  Identities=44%  Similarity=0.942  Sum_probs=138.0

Q ss_pred             cccccceeeEEEeeeeecCCCCCcccceEEEEEEecCCcCceEEEEEEEECCCCCCceeeeeEEEeCCCC-CEEEEEEeC
Q 045829           13 IAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDG-SIEVVIAQS   91 (161)
Q Consensus        13 l~PLawLlG~W~G~G~~~yP~~~~~~y~Eei~fs~~~G~p~L~y~s~~w~~~~g~p~h~EtGfwr~~p~~-~ve~~la~p   91 (161)
                      |.||+||||+|+|.|++.||++++|+|+|+|+|+| +|+|+|+|+|++|++++++|+|+|+||||++|++ +|++++|||
T Consensus         1 l~PLa~LvG~W~G~G~~~~P~~~~~~y~E~i~f~~-~g~p~L~Y~s~~w~~~~~~p~h~E~Gfwr~~~~~~~V~~~la~p   79 (148)
T cd07828           1 LGPLAWLLGTWEGKGVGGYPTIEEFTYGEEITFSH-DGQPFLNYTSRTWRLDDGRPLHRETGFWRIDPDTGEVELLLAHP   79 (148)
T ss_pred             CcCcceEeEEEEeeeeccCCCCCceEeEEEEEEEc-CCCCeEEEEEEEEeCCCCCcceEeeEEEEEcCCCCEEEEEEEEC
Confidence            68999999999999999999999999999999999 5999999999999999999999999999999887 999999999


Q ss_pred             CceEEEEeEEecCCCCeEEEEeeeeec---cccccceeEEEEEECCeEEEEEEeeecCCCCcccceeeeEEe
Q 045829           92 TGLVEVQKGTYNAEEKVIKLQSELVGN---ASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK  160 (161)
Q Consensus        92 ~G~~ei~~G~~~~~~~~i~l~t~~i~~---a~~v~~~~R~f~l~~~~L~~~~~ma~~~~~~l~~hlsa~l~r  160 (161)
                      +|+|||++|+++  +++|+|+++.|++   ++++++++|+|+|++|+|+|+++|++. ++||++|+||+|+|
T Consensus        80 ~G~~ei~~G~~~--~~~~~l~~~~i~rt~~a~~~~~~~R~~~l~~~~L~~~~~~~~~-~~~l~~h~s~~L~r  148 (148)
T cd07828          80 TGVVEIEEGEVR--GTQLELTTDAVARTSFAPEVTAAKRLYGLVDGTLSYTVDMATV-GQPLTHHLSARLKR  148 (148)
T ss_pred             CceEEEEEeEEc--CCEEEEEEccEEEcCCcccccceEEEEEEeCCeEEEEEEeeeC-CCCCceeEeeEEeC
Confidence            999999999997  5799999999987   446999999999999999999999999 89999999999998

Nitrobindin is a heme-containing lipocalin that may reversibly bind nitric oxide. This heme-binding domain forms a beta barrel structure, and in a small family of proteins from tetrapods, it is found C-terminal to a THAP zinc finger domain (a sequence-specific DNA binding domain). Members of this group are putatively related to fatty acid-binding proteins (FABPs).

>PF08768 DUF1794: Domain of unknown function (DUF1794); InterPro: IPR014878 This protein forms a beta barrel structure

Probab=100.00  E-value=3e-53  Score=328.17  Aligned_cols=147  Identities=40%  Similarity=0.876  Sum_probs=137.2

Q ss_pred             CccccccceeeEEEeeeeecCCCCCcccceEEEEEEecCCcCceEEEEEEEECCCCC--CceeeeeEEEeCCCCC-EEEE
Q 045829           11 PAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGE--PMHAESGYWRPNPDGS-IEVV   87 (161)
Q Consensus        11 p~l~PLawLlG~W~G~G~~~yP~~~~~~y~Eei~fs~~~G~p~L~y~s~~w~~~~g~--p~h~EtGfwr~~p~~~-ve~~   87 (161)
                      |+|.||+||||+|+|+|++.||++++|+|+|+|+|+| +|+|+|+|++++|.+++|+  |+|+|+||||++|+++ |+++
T Consensus         1 p~L~PLa~LlG~W~G~G~~~~P~~~~~~y~e~i~f~~-~g~p~L~y~~~~~~~~~g~~~p~h~E~Gf~~~~~~~~~v~~~   79 (154)
T PF08768_consen    1 PELGPLAWLLGTWEGEGVGVYPTIEDFPYGEEITFSH-DGQPFLNYTSRTWNVDDGSVRPFHDETGFWRVDPATNEVELS   79 (154)
T ss_dssp             GGGGGGGGG-EEEEEEEEEEETTEEEEEEEEEEEEEE-SSSSEEEEEEEEEETTTS-EEEEEEEEEEEEESTTSEEEEEE
T ss_pred             CCCcccccEeEEEEEeeEccCCCCCCcCcEEEEEEEE-CCcCeEEEEEEEEECCCCCCCccccceeEEEEeCCCCEEEEE
Confidence            7899999999999999999999999999999999999 5999999999999999888  9999999999999986 9999


Q ss_pred             EEeCCceEEEEeEEecCCCCeEEEEeeeeecc---ccccceeEEEEEEC-CeEEEEEEeeecCCCCcccceeeeEEeC
Q 045829           88 IAQSTGLVEVQKGTYNAEEKVIKLQSELVGNA---SKVREVSRVFELVN-GELRYVVQMATNHLTSLRPHLKAVLRKL  161 (161)
Q Consensus        88 la~p~G~~ei~~G~~~~~~~~i~l~t~~i~~a---~~v~~~~R~f~l~~-~~L~~~~~ma~~~~~~l~~hlsa~l~rv  161 (161)
                      +++|+|+++||+|+++  +++|+|++++|+++   ++|++++|+|+|++ |+|+|+++|++. ++||++|+||+|+||
T Consensus        80 ~~~p~G~~~l~~G~~~--~~~i~l~t~~i~r~~~~k~v~~~~R~~~l~~~~~L~~~~~~~~~-~~~l~~h~sa~L~Rv  154 (154)
T PF08768_consen   80 LAHPRGVTELEEGTVD--GPRIELETDAIARSPFAKEVTAFKRMFGLVDDGTLMYTQDMATI-GGPLQHHLSARLKRV  154 (154)
T ss_dssp             EEETTTEEEEEEEEEE--TTEEEEEEEEEEE-TTS-SEEEEEEEEEEETTSEEEEEEEEEET-TSEEEEEEEEEEEEE
T ss_pred             EEeCCceEEEEEEEcC--CCEEEEEECcEEecccccccccEEEEEEEecCCeEEEEEEhhhc-CCCCcceEEEEEEeC
Confidence            9999999999999976  78999999999974   58999999999995 599999999998 889999999999996

It is sometimes found on proteins containing a THAP (IPR006612 from INTERPRO) domain. ; PDB: 2FR2_A 2A13_A 2Q4N_A 3EMM_A 3IA8_B 2FWV_A.

>KOG3371 consensus Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=2.2e-35  Score=241.66  Aligned_cols=154  Identities=34%  Similarity=0.712  Sum_probs=142.3

Q ss_pred             CCCCCCCCccccccceeeEEEee--eeecCCCCCcccceEEEEEEecCC-----cCceEEEEEEEECCCCCCceeeeeEE
Q 045829            4 GGGVPVHPAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGG-----KPVIAYTQKTWKLGSGEPMHAESGYW   76 (161)
Q Consensus         4 ~~~~~L~p~l~PLawLlG~W~G~--G~~~yP~~~~~~y~Eei~fs~~~G-----~p~L~y~s~~w~~~~g~p~h~EtGfw   76 (161)
                      .....|+|.|.|++||||+|+++  |++.||++.+|.|+|||++++. |     .|+|||++++|+++|.+++|+|+||+
T Consensus        70 ~~~~~L~P~l~p~~~~vG~W~S~~~g~~~fPt~~~f~y~Eei~i~~~-~~~~~~~p~LNyTa~aws~~~~~~~H~e~Gfi  148 (243)
T KOG3371|consen   70 QDDLPLNPILKPIAWLVGRWRSEFSGKGRFPTDPSFTYGEEIIISIP-GNPSFHVPFLNYTATAWSLDDKDPMHVENGFI  148 (243)
T ss_pred             ccccccCcccchhhhhhceeeeecCCceecCCCCCCccceeEEEecC-CccccCCcceEEeeeeeccCCCcccceecceE
Confidence            45678999999999999999999  9999999999999999999995 6     99999999999999999999999999


Q ss_pred             EeCCC---CCEEEEEEeCCceEEEEeEEecCCCCeEEEEeeeeec-----cccccceeEEEEEE-CCeEEEEEEeee---
Q 045829           77 RPNPD---GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGN-----ASKVREVSRVFELV-NGELRYVVQMAT---  144 (161)
Q Consensus        77 r~~p~---~~ve~~la~p~G~~ei~~G~~~~~~~~i~l~t~~i~~-----a~~v~~~~R~f~l~-~~~L~~~~~ma~---  144 (161)
                      +++|+   +.|+++.++|+|+++|++|++.  ++++.|....+.+     .+.+...+|.|.|. ++.|++++.|.+   
T Consensus       149 t~~p~~~t~~val~t~~N~Gl~~iEeGtv~--~~~l~l~lk~~~riSf~~~~~v~~~~r~~~l~~~n~Le~~v~m~t~~~  226 (243)
T KOG3371|consen  149 TLKPDKMTRSVALTTVMNTGLVEIEEGTVN--GNQLRLKLKYIGRISFSRDKAVHNIRREFTLGDENKLEMQVHMLTIRG  226 (243)
T ss_pred             EEccCCCCceEEEEeeccCceEEEEeeccc--CcEEEEEEeecceeeeccccccccceeEEEEecCCceeeeeeeeeccc
Confidence            99999   7999999999999999999998  4588888876653     56899999999998 689999999999   


Q ss_pred             cCCCCcccceeeeEEeC
Q 045829          145 NHLTSLRPHLKAVLRKL  161 (161)
Q Consensus       145 ~~~~~l~~hlsa~l~rv  161 (161)
                      . ++.+++|..+.|+|+
T Consensus       227 ~-T~~~~eh~~v~y~k~  242 (243)
T KOG3371|consen  227 T-THKFTEHYKVIYKKV  242 (243)
T ss_pred             c-cccceeeeeeeeeec
Confidence            6 889999999999996

>COG5514 Uncharacterized conserved protein [Function unknown]

Probab=99.57  E-value=3.8e-14  Score=110.87  Aligned_cols=151  Identities=21%  Similarity=0.322  Sum_probs=111.0

Q ss_pred             CCccccccceeeEEEee-eeecCCCC----------CcccceEEEEEEec----CCcC----ceEEEEEEEECCCCCCce
Q 045829           10 HPAIAPISYLLGTWRGQ-GSGGYPTI----------NAFDYGEELNFTHS----GGKP----VIAYTQKTWKLGSGEPMH   70 (161)
Q Consensus        10 ~p~l~PLawLlG~W~G~-G~~~yP~~----------~~~~y~Eei~fs~~----~G~p----~L~y~s~~w~~~~g~p~h   70 (161)
                      .-++.||+-|+|+|+++ |.+-.|..          ..-+|.|.|+|+..    ++-|    .|+|++.+.+..|...+|
T Consensus        23 st~inPLakL~GvW~~dkGvDVaP~~e~s~v~~G~~a~~py~E~i~~~~~~~aTNas~Q~Lv~~~Yh~~vfr~~dn~~fH  102 (203)
T COG5514          23 STNINPLAKLAGVWQSDKGVDVAPKEEGSNVGNGGPARRPYRERIRMDAIDPATNASPQLLVGLRYHSHVFRPGDNITFH  102 (203)
T ss_pred             ccccchhHHhhceeecccccccCcccccCCCCCCCccccceeEEEEeccCCcccCCCcceeEEEeeeeeccccccCceee
Confidence            34588999999999998 88777632          34679999999985    3433    389999999999999999


Q ss_pred             eeeeEEEeCCCC-CEEEEEEeCCceEEEEeEEecCCCCeEEEEee-eeeccc------cccceeEEEEEE-CCeEEEEEE
Q 045829           71 AESGYWRPNPDG-SIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-LVGNAS------KVREVSRVFELV-NGELRYVVQ  141 (161)
Q Consensus        71 ~EtGfwr~~p~~-~ve~~la~p~G~~ei~~G~~~~~~~~i~l~t~-~i~~a~------~v~~~~R~f~l~-~~~L~~~~~  141 (161)
                      ...|||-|++.. -|.=++..|+|+|.+.+|....+ +...-.+. .|+..+      +.+...--.-|. ||.|.|.+.
T Consensus       103 DQvGywiwdkknn~i~~sfcIPRgvc~~AeG~a~~t-~~~~t~t~G~iae~sfm~kn~kT~~fs~di~ln~DgslsY~q~  181 (203)
T COG5514         103 DQVGYWIWDKKNNLIMQSFCIPRGVCLLAEGWANDT-KFSVTATRGDIAETSFMDKNFKTTSFSCDIALNDDGSLSYLQQ  181 (203)
T ss_pred             ccceEEEEecCCCeEEEeeeccceEEEEeecccCCc-eeeeecccCCchhhhHHHhcCCcceEEEEEEecCCCcEEEEEE
Confidence            999999998754 67888999999999999998632 22222222 355433      333333334445 668999884


Q ss_pred             eeec-CCCCcccceeeeEEeC
Q 045829          142 MATN-HLTSLRPHLKAVLRKL  161 (161)
Q Consensus       142 ma~~-~~~~l~~hlsa~l~rv  161 (161)
                      ..-. .|+++.|-.+..|.||
T Consensus       182 TsL~iyGq~F~HvD~sTL~kv  202 (203)
T COG5514         182 TSLMIYGQAFNHVDASTLTKV  202 (203)
T ss_pred             EEEEEeccccceechhheEec
Confidence            3322 3788888888888876

>PF07617 DUF1579: Protein of unknown function (DUF1579); InterPro: IPR011473 This is a family of paralogous hypothetical proteins identified in Rhodopirellula baltica that also has members in Gloeobacter violaceus, Rhizobium meliloti and Agrobacterium tumefaciens, amongst others

Probab=97.66  E-value=0.01  Score=46.33  Aligned_cols=143  Identities=18%  Similarity=0.221  Sum_probs=92.7

Q ss_pred             cccceeeEEEeeeeecC-CCCCcccceEEEEEEecCCcCceEEEEEEEECCCCCCceeeeeEEEeCCCC-CEEEEEEeCC
Q 045829           15 PISYLLGTWRGQGSGGY-PTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDG-SIEVVIAQST   92 (161)
Q Consensus        15 PLawLlG~W~G~G~~~y-P~~~~~~y~Eei~fs~~~G~p~L~y~s~~w~~~~g~p~h~EtGfwr~~p~~-~ve~~la~p~   92 (161)
                      =|+.|+|.|++++...+ |+..+....=+.++... |.-+|--+.+--.. +|.|++. .+.+=.+|.. +..-.-+.+-
T Consensus        10 ~L~~lvG~W~~~~~~~~~P~~~~~~~~~~~~~r~L-gG~~l~~e~~g~~~-~g~~~~~-~~~lGYD~~~~~yvgtWidSM   86 (159)
T PF07617_consen   10 WLARLVGEWTGEGECWMGPDQPPMKSTGTETVRML-GGRWLIQEYEGSMP-GGGPFEG-IGTLGYDPAKKKYVGTWIDSM   86 (159)
T ss_pred             HHHhhcCceeEEEEEecCCCCCCcEEEEEEEEEEe-CCEEEEEEEEeecC-CCCceEE-EEEEEECCccCeEEEEEeccC
Confidence            36677999999998755 65544444333334433 55565555444333 4778753 3444457764 3444433333


Q ss_pred             ce-EEEEeEEecCCCCeEEEEeeeee-c-cccccceeEEEEEE-CCeEEEEEEeeecCCCCcccceeeeEEeC
Q 045829           93 GL-VEVQKGTYNAEEKVIKLQSELVG-N-ASKVREVSRVFELV-NGELRYVVQMATNHLTSLRPHLKAVLRKL  161 (161)
Q Consensus        93 G~-~ei~~G~~~~~~~~i~l~t~~i~-~-a~~v~~~~R~f~l~-~~~L~~~~~ma~~~~~~l~~hlsa~l~rv  161 (161)
                      |- ..+++|+++.+++.|+|.+.-.. . ..+....+=++.++ +|.+.....+... +.+=+.-+++.|+|.
T Consensus        87 ~t~~~~~~G~~d~~gk~ltl~~~gp~~~~~G~~~~~R~v~~~~ddd~~~~~~~~~~~-dG~w~~~me~~yrR~  158 (159)
T PF07617_consen   87 GTGIWVYEGTLDDDGKTLTLNGEGPDPGGSGKMWGYRDVIEFVDDDHRTLTSYMKQP-DGEWKKFMEIVYRRK  158 (159)
T ss_pred             CCceeeEccccCCCCCEEEEEEEecCCCCCCcccceEEEEEEeCCCeeEEEEEEeCC-CCceEEEEEEEEEEc
Confidence            32 66999999988888999776322 1 23345677788888 7788888888887 677788899999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	161
3emm_A	166	X-Ray Structure Of Protein From Arabidopsis Thalian		2e-63
2a13_A	166	X-Ray Structure Of Protein From Arabidopsis Thalian		9e-62
2fr2_A	172	Crystal Structure Of Rv2717c From M. Tuberculosis L		3e-25
3ia8_A	163	The Structure Of The C-Terminal Heme Nitrobindin Do		4e-11
2fwv_A	226	Crystal Structure Of Rv0813 Length = 226		2e-07

>pdb|3EMM|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At1g79260 With Bound Heme Length = 166

Iteration: 1
 Score =  237 bits (604), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 117/158 (74%), Positives = 135/158 (85%), Gaps = 2/158 (1%)
Query: 4   GGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKL 63
           G   PVHP +AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL
Sbjct: 11  GESPPVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKL 69
Query: 64  GSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVR 123
            SG PMHAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV+
Sbjct: 70  ESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVK 129
Query: 124 EVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           E+SR FELV+G+L YVV+M+T     L+PHLKA+L KL
Sbjct: 130 EISREFELVDGKLSYVVRMSTT-TNPLQPHLKAILDKL 166

>pdb|2A13|A Chain A, X-Ray Structure Of Protein From Arabidopsis Thaliana At1g79260 Length = 166

Iteration: 1
 Score =  231 bits (590), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 115/158 (72%), Positives = 133/158 (84%), Gaps = 2/158 (1%)
Query: 4   GGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKL 63
           G   PVHP +AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL
Sbjct: 11  GESPPVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKL 69
Query: 64  GSGEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVR 123
            SG P HAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV+
Sbjct: 70  ESGAPXHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVK 129
Query: 124 EVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           E+SR FELV+G+L YVV+ +T     L+PHLKA+L KL
Sbjct: 130 EISREFELVDGKLSYVVRXSTT-TNPLQPHLKAILDKL 166

>pdb|2FR2|A Chain A, Crystal Structure Of Rv2717c From M. Tuberculosis Length = 172

Iteration: 1
 Score =  110 bits (275), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 91/156 (58%), Gaps = 10/156 (6%)
Query: 11  PAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMH 70
           PA+  +S LLG+W G+G+G YPTI  F+Y EE+ F H G KP + YTQ+T  +  G+P+H
Sbjct: 7   PALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKPLH 65
Query: 71  AESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE--------LVGNASKV 122
           +E+GY R    G +E+V+A  +G+ E++ GTY+    VI+L+          L   A +V
Sbjct: 66  SETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEV 125
Query: 123 REVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVL 158
             + R + +   EL Y +QM       L+ HL AVL
Sbjct: 126 TALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVL 160

>pdb|3IA8|A Chain A, The Structure Of The C-Terminal Heme Nitrobindin Domain Of Thap Domain-Containing Protein 4 From Homo Sapiens Length = 163

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 8/140 (5%)
Query: 11  PAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           P + P+S+ LGTW     G+G YPT+  F Y EE++ +H  G+P + ++  ++   + +P
Sbjct: 6   PVVEPLSWXLGTWLSDPPGAGTYPTLQPFQYLEEVHISHV-GQPXLNFSFNSFHPDTRKP 64
Query: 69  MHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASK---VRE 124
            H E G+ R  PD   +  V AQ+TG+VEV++G  N +E  I   S    + +K   V +
Sbjct: 65  XHRECGFIRLKPDTNKVAFVSAQNTGVVEVEEGEVNGQELCIASHSIARISFAKEPHVEQ 124
Query: 125 VSRVFEL-VNGELRYVVQMA 143
           ++R F L   G+L   V  A
Sbjct: 125 ITRKFRLNSEGKLEQTVSXA 144

>pdb|2FWV|A Chain A, Crystal Structure Of Rv0813 Length = 226

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 20  LGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG----EPMHAESGY 75
           +G WRG+G G  P  + + +G+++  +H GG   + +  ++W+L +     EP   E+G+
Sbjct: 72  VGVWRGEGEGRGPDGD-YRFGQQIVVSHDGGD-YLNWESRSWRLTATGDYQEPGLREAGF 129
Query: 76  WR-------PNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVR--EVS 126
           WR       P+   +IE+++A S G VE+  G    +     +   L  + S V      
Sbjct: 130 WRFVADPYDPSESQAIELLLAHSAGYVELFYGRPRTQSSWELVTDALARSRSGVLVGGAK 189
Query: 127 RVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           R++ +V G     V+   +    L PHL A L + 
Sbjct: 190 RLYGIVEGGDLAYVEERVDADGGLVPHLSARLSRF 224

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	161
2a13_A	166	AT1G79260; structural genomics, protein structure	7e-61
2fr2_A	172	Hypothetical protein RV2717C; beta barrel, fatty a	5e-56
3ia8_A	163	THAP domain-containing protein 4; beta barrel,stru	5e-49
2fwv_A	226	RV0813C, hypothetical protein mtubf_01000852; stru	5e-45

>2a13_A AT1G79260; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; HET: MSE; 1.32A {Arabidopsis thaliana} SCOP: b.60.1.8 PDB: 2q4n_A 3emm_A* Length = 166

 Score =  184 bits (469), Expect = 7e-61
 Identities = 116/156 (74%), Positives = 134/156 (85%), Gaps = 2/156 (1%)

Query: 6   GVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGS 65
             PVHP +AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL S
Sbjct: 13  SPPVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKLES 71

Query: 66  GEPMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREV 125
           G PMHAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV+E+
Sbjct: 72  GAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVKEI 131

Query: 126 SRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           SR FELV+G+L YVV+M+T     L+PHLKA+L KL
Sbjct: 132 SREFELVDGKLSYVVRMSTTT-NPLQPHLKAILDKL 166

>2fr2_A Hypothetical protein RV2717C; beta barrel, fatty acid binding, structural genomics, PSI, P structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: b.60.1.8 Length = 172

 Score =  172 bits (438), Expect = 5e-56
 Identities = 60/161 (37%), Positives = 92/161 (57%), Gaps = 10/161 (6%)

Query: 8   PVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGE 67
            + PA+  +S LLG+W G+G+G YPTI  F+Y EE+ F H G KP + YTQ+T  +  G+
Sbjct: 4   DLAPALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGK 62

Query: 68  PMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVG--------NA 119
           P+H+E+GY R    G +E+V+A  +G+ E++ GTY+    VI+L+              A
Sbjct: 63  PLHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTA 122

Query: 120 SKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
            +V  + R + +   EL Y +QM       L+ HL AVL +
Sbjct: 123 KEVTALDRSYRIDGDELSYSLQMRAVG-QPLQDHLAAVLHR 162

>3ia8_A THAP domain-containing protein 4; beta barrel,structural genomics, protein structure initiativ center for eukaryotic structural genomics, CESG; HET: HEM; 1.79A {Homo sapiens} Length = 163

 Score =  154 bits (391), Expect = 5e-49
 Identities = 54/161 (33%), Positives = 90/161 (55%), Gaps = 9/161 (5%)

Query: 8   PVHPAIAPISYLLGTWRGQ--GSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGS 65
            ++P + P+S++LGTW     G+G YPT+  F Y EE++ +H G +P++ ++  ++   +
Sbjct: 3   KMNPVVEPLSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISHVG-QPMLNFSFNSFHPDT 61

Query: 66  GEPMHAESGYWRPNPD-GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASK--- 121
            +PMH E G+ R  PD   +  V AQ+TG+VEV++G  N +E  I   S    + +K   
Sbjct: 62  RKPMHRECGFIRLKPDTNKVAFVSAQNTGVVEVEEGEVNGQELCIASHSIARISFAKEPH 121

Query: 122 VREVSRVFEL-VNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
           V +++R F L   G+L   V MAT     +  HL    +K+
Sbjct: 122 VEQITRKFRLNSEGKLEQTVSMATTT-QPMTQHLHVTYKKV 161

>2fwv_A RV0813C, hypothetical protein mtubf_01000852; structural genomics, conserved hypothetical; 1.70A {Mycobacterium tuberculosis} Length = 226

 Score =  146 bits (369), Expect = 5e-45
 Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 19/171 (11%)

Query: 6   GVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGS 65
           G  ++ A+  +  L+G WRG+G G  P  + + +G+++  +H  G   + +  ++W+L +
Sbjct: 58  GADLNNALLALLPLVGVWRGEGEGRGPDGD-YRFGQQIVVSHD-GGDYLNWESRSWRLTA 115

Query: 66  ----GEPMHAESGYWRPNPD-------GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE 114
                EP   E+G+WR   D        +IE+++A S G VE+  G    +    +L ++
Sbjct: 116 TGDYQEPGLREAGFWRFVADPYDPSESQAIELLLAHSAGYVELFYGRPRTQSS-WELVTD 174

Query: 115 LVG---NASKVREVSRVFELVN-GELRYVVQMATNHLTSLRPHLKAVLRKL 161
            +    +   V    R++ +V  G+L YV +        L PHL A L + 
Sbjct: 175 ALARSRSGVLVGGAKRLYGIVEGGDLAYVEERVDA-DGGLVPHLSARLSRF 224

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	161
2fr2_A	172	Hypothetical protein RV2717C; beta barrel, fatty a	100.0
3ia8_A	163	THAP domain-containing protein 4; beta barrel,stru	100.0
2a13_A	166	AT1G79260; structural genomics, protein structure	100.0
2fwv_A	226	RV0813C, hypothetical protein mtubf_01000852; stru	100.0

>2fr2_A Hypothetical protein RV2717C; beta barrel, fatty acid binding, structural genomics, PSI, P structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: b.60.1.8

Probab=100.00  E-value=1.5e-58  Score=362.85  Aligned_cols=155  Identities=38%  Similarity=0.706  Sum_probs=145.1

Q ss_pred             CCCCCCCccccccceeeEEEeeeeecCCCCCcccceEEEEEEecCCcCceEEEEEEEECCCCCCceeeeeEEEeCCCCCE
Q 045829            5 GGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSI   84 (161)
Q Consensus         5 ~~~~L~p~l~PLawLlG~W~G~G~~~yP~~~~~~y~Eei~fs~~~G~p~L~y~s~~w~~~~g~p~h~EtGfwr~~p~~~v   84 (161)
                      ++++|||+|.||+||+|+|+|+|++.||++++|+|+|+|+|+| +|+|||+|+|++|++++++|+|+|+||||++|+++|
T Consensus         1 ~~~~l~p~L~PLa~LlG~W~G~G~~~~Pt~~~~~y~Eei~fs~-~G~p~L~Y~s~~w~~~~~~p~h~E~Gfwr~~~~g~v   79 (172)
T 2fr2_A            1 MTRDLAPALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAH-VGKPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCV   79 (172)
T ss_dssp             ---CCCGGGGGGGGGCEEEEEEEEECCTTSCCEEEEEEEEEEE-CSSSEEEEEEEEEETTTCCEEEEEEEEEEESSTTEE
T ss_pred             CCCCcCcchhccceeeEEEEeeeEEeCCCCCceeeEEEEEEEE-CCCCeEEEEEEEEECCCCCcceEeeEEEEECCCCcE
Confidence            4789999999999999999999999999999999999999999 599999999999999999999999999999999999


Q ss_pred             EEEEEeCCceEEEEeEEe--cCCCCeEEEEee---eeec---cccccceeEEEEEECCeEEEEEEeeecCCCCcccceee
Q 045829           85 EVVIAQSTGLVEVQKGTY--NAEEKVIKLQSE---LVGN---ASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKA  156 (161)
Q Consensus        85 e~~la~p~G~~ei~~G~~--~~~~~~i~l~t~---~i~~---a~~v~~~~R~f~l~~~~L~~~~~ma~~~~~~l~~hlsa  156 (161)
                      |++++||+|++|||+|++  .+++.+|+|+++   +|++   +++|++++|+|+|++|+|+|+++||+. ++|||+||||
T Consensus        80 e~~la~p~G~~ei~~G~~~~~~~~~~~~l~t~~~~~i~rs~~a~~v~~~~R~f~l~~~~L~y~~~ma~~-~~~l~~hlsa  158 (172)
T 2fr2_A           80 ELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAV-GQPLQDHLAA  158 (172)
T ss_dssp             EEEEEETTTEEEEEEEEEEEETTEEEEEEETTTTCEEEECTTSCCEEEEEEEEEEETTEEEEEEEEEET-TEEEEEEEEE
T ss_pred             EEEEEeCCceEEEEEEEeecCCCccEEEEEecccccEEecCCcccccceEEEEEEeCCEEEEEEEeecC-CCCCccceEE
Confidence            999999999999999988  444569999999   9987   456999999999999999999999999 9999999999


Q ss_pred             eEEeC
Q 045829          157 VLRKL  161 (161)
Q Consensus       157 ~l~rv  161 (161)
                      +|+|+
T Consensus       159 ~l~r~  163 (172)
T 2fr2_A          159 VLHRQ  163 (172)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            99996

>3ia8_A THAP domain-containing protein 4; beta barrel,structural genomics, protein structure initiativ center for eukaryotic structural genomics, CESG; HET: HEM; 1.79A {Homo sapiens} SCOP: b.60.1.0

Probab=100.00  E-value=2.6e-58  Score=358.73  Aligned_cols=152  Identities=34%  Similarity=0.684  Sum_probs=144.7

Q ss_pred             CCCCCCccccccceeeEEEe--eeeecCCCCCcccceEEEEEEecCCcCceEEEEEEEECCCCCCceeeeeEEEeCCCC-
Q 045829            6 GVPVHPAIAPISYLLGTWRG--QGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDG-   82 (161)
Q Consensus         6 ~~~L~p~l~PLawLlG~W~G--~G~~~yP~~~~~~y~Eei~fs~~~G~p~L~y~s~~w~~~~g~p~h~EtGfwr~~p~~-   82 (161)
                      +++|||+|.||+||||+|+|  .|++.||++++|.|+|+|+|+| +|+|||||+|++|++|+++|+|+|+||||++|++ 
T Consensus         1 ~~~l~p~L~pLa~L~G~W~G~~~G~~~yP~~~~~~y~eei~f~~-~G~p~L~Y~s~~w~~d~~~p~h~E~Gfwr~~p~~~   79 (163)
T 3ia8_A            1 PPKMNPVVEPLSWMLGTWLSDPPGAGTYPTLQPFQYLEEVHISH-VGQPMLNFSFNSFHPDTRKPMHRECGFIRLKPDTN   79 (163)
T ss_dssp             CCCCCGGGGGGGGGCEEEEESSCEEEEETTEEEEEEEEEEEEEC-SSSSEEEEEEEEECTTTCCEEEEEEEEEEECTTSC
T ss_pred             CCCCCcchhccceeeEEEeccCCccccCCCCCCceeEEEEEEEe-CCCCeEEEEEEEEECCCCCcceEEeEEEEEcCCCC
Confidence            57999999999999999999  5999999999999999999999 5999999999999999999999999999999985 


Q ss_pred             CEEEEEEeCCceEEEEeEEecCCCCeEEEEeeeeec---ccc--ccceeEEEEEE-CCeEEEEEEeeecCCCCcccceee
Q 045829           83 SIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGN---ASK--VREVSRVFELV-NGELRYVVQMATNHLTSLRPHLKA  156 (161)
Q Consensus        83 ~ve~~la~p~G~~ei~~G~~~~~~~~i~l~t~~i~~---a~~--v~~~~R~f~l~-~~~L~~~~~ma~~~~~~l~~hlsa  156 (161)
                      +|++++|||+|++|||+|+++  +++|+|+|++|+|   ++.  |++++|+|+|+ +|+|+|+++||+. ++|||+||||
T Consensus        80 ~ve~~la~p~G~~ei~~G~~~--~~~i~L~t~~v~rt~~a~~~~v~~~~R~~~l~~~g~L~~~~~ma~~-~~~l~~hlsa  156 (163)
T 3ia8_A           80 KVAFVSAQNTGVVEVEEGEVN--GQELCIASHSIARISFAKEPHVEQITRKFRLNSEGKLEQTVSMATT-TQPMTQHLHV  156 (163)
T ss_dssp             EEEEEEEETTTEEEEEEEEEE--TTEEEEEEEEEEECTTCCSSCEEEEEEEEEECTTSCEEEEEEEEET-TEEEEEEEEE
T ss_pred             eEEEEEEeCCCeEEEEEEEeC--CCEEEEEEccEEeccCCCCCceeeEEEEEEEcCCCcEEEEEEeecc-CCCCCcceeE
Confidence            899999999999999999997  6799999999987   454  99999999999 7899999999999 9999999999


Q ss_pred             eEEeC
Q 045829          157 VLRKL  161 (161)
Q Consensus       157 ~l~rv  161 (161)
                      +|+||
T Consensus       157 ~l~r~  161 (163)
T 3ia8_A          157 TYKKV  161 (163)
T ss_dssp             EEEEC
T ss_pred             EEEec
Confidence            99997

>2a13_A AT1G79260; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; HET: MSE; 1.32A {Arabidopsis thaliana} SCOP: b.60.1.8 PDB: 2q4n_A 3emm_A*

Probab=100.00  E-value=1.6e-57  Score=355.27  Aligned_cols=155  Identities=74%  Similarity=1.219  Sum_probs=147.0

Q ss_pred             CCCCCCCccccccceeeEEEeeeeecCCCCCcccceEEEEEEecCCcCceEEEEEEEECCCCCCceeeeeEEEeCCCCCE
Q 045829            5 GGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSI   84 (161)
Q Consensus         5 ~~~~L~p~l~PLawLlG~W~G~G~~~yP~~~~~~y~Eei~fs~~~G~p~L~y~s~~w~~~~g~p~h~EtGfwr~~p~~~v   84 (161)
                      .+++|||+|+||+||+|+|+|+|++.||++++|+|+|+|+|+| +|+|||+|+|++|++++++|+|+|+||||++|+++|
T Consensus        12 ~~~~l~~~L~PLa~L~G~W~G~G~~~~P~~~~~~y~Eei~fs~-~G~p~L~Y~~~~w~~~~~~p~h~E~Gywr~~p~~~v   90 (166)
T 2a13_A           12 ESPPVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSH-SGKPVIAYTQKTWKLESGAPMHAESGYFRPRPDGSI   90 (166)
T ss_dssp             --CCCCTTTGGGGGGCEEEEEEEEEEETTEEEEEEEEEEEEEC-CSSSCEEEEEEEECTTTCCEEEEEEEEEEECTTSEE
T ss_pred             CCCCCChhhhccceeeEEEEeeeEEeCCCCCceeeEEEEEEEe-CCCCeEEEEEEEEECCCCCcceEeeEEEEECCCCcE
Confidence            4679999999999999999999999999999999999999999 599999999999999999999999999999999999


Q ss_pred             EEEEEeCCceEEEEeEEecCCCCeEEEEeeeeeccccccceeEEEEEECCeEEEEEEeeecCCCCcccceeeeEEeC
Q 045829           85 EVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL  161 (161)
Q Consensus        85 e~~la~p~G~~ei~~G~~~~~~~~i~l~t~~i~~a~~v~~~~R~f~l~~~~L~~~~~ma~~~~~~l~~hlsa~l~rv  161 (161)
                      ++++|||+|++|||+|+++++..+|+|++++|++++..+..+|+|+|++|+|+|+++|++. ++||++|+||+|+||
T Consensus        91 e~~la~p~G~~ei~~G~~~~~~~~~~l~t~~I~r~~~a~~~~R~y~l~~g~L~y~~~ma~~-~~~l~~h~sa~L~Rv  166 (166)
T 2a13_A           91 EVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVKEISREFELVDGKLSYVVRMSTT-TNPLQPHLKAILDKL  166 (166)
T ss_dssp             EEEEEETTSCEEEEEEEEETTTTEEEEEEEEEESCSSEEEEEEEEEEETTEEEEEEEEEES-SSCSEEEEEEEEEEC
T ss_pred             EEEEEeCCceEEEEEEEecCCceEEEEEEccEEecCcchhcEEEEEEeCCEEEEEEEeecC-CCCCceeEEEEEEeC
Confidence            9999999999999999998665689999999999887777889999999999999999999 999999999999997

>2fwv_A RV0813C, hypothetical protein mtubf_01000852; structural genomics, conserved hypothetical; 1.70A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.6e-54  Score=350.91  Aligned_cols=154  Identities=28%  Similarity=0.567  Sum_probs=143.0

Q ss_pred             CCCCCCCCccccccceeeEEEeeeeecCCCCCcccceEEEEEEecCCcCceEEEEEEEECCCC----CCceeeeeEEEeC
Q 045829            4 GGGVPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSG----EPMHAESGYWRPN   79 (161)
Q Consensus         4 ~~~~~L~p~l~PLawLlG~W~G~G~~~yP~~~~~~y~Eei~fs~~~G~p~L~y~s~~w~~~~g----~p~h~EtGfwr~~   79 (161)
                      .++++|||+|.||+||||+|+|+|++.| ++++|+|+|||+|+| +|+|||+|+|++|+++++    +|+|+|+||||++
T Consensus        56 ~~~~dL~p~L~PLa~LlG~W~G~G~~~y-ti~~~~Y~EeI~Fsh-~G~P~L~Y~s~tw~~d~~g~~~~P~H~EtGywr~~  133 (226)
T 2fwv_A           56 REGADLNNALLALLPLVGVWRGEGEGRG-PDGDYRFGQQIVVSH-DGGDYLNWESRSWRLTATGDYQEPGLREAGFWRFV  133 (226)
T ss_dssp             TSSSCCCGGGGGGGGGCEEEEEEEEEEE-TTEEEEEEEEEEEEB-CSSSSEEEEEEEEEECTTSCEEEEEEEEEEEEEEC
T ss_pred             CCCCCCChhhhccceeeEEEEecccccc-ccCceeeEEEEEEEe-CCCCeEEEEEEEEEcCCCCCcCCcceeeeeEEEeC
Confidence            4788999999999999999999999999 999999999999999 599999999999999988    8999999999999


Q ss_pred             CC-------CCEEEEEEeCCceEEEEeEEecCCCCeEEEEeeeeecc---ccccceeEEEEEEC-CeEEEEEEeeecCCC
Q 045829           80 PD-------GSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNA---SKVREVSRVFELVN-GELRYVVQMATNHLT  148 (161)
Q Consensus        80 p~-------~~ve~~la~p~G~~ei~~G~~~~~~~~i~l~t~~i~~a---~~v~~~~R~f~l~~-~~L~~~~~ma~~~~~  148 (161)
                      |+       ++||++++||+|++|||+|++.+ .++|+|+++.|+|+   ++|++.+|+|+|++ |+|+|+++|++. ++
T Consensus       134 p~~~~~~~~g~Vel~la~p~Givei~~G~~~~-~~~i~L~t~~I~rt~~a~~v~~~~R~yglv~dg~L~y~~dma~~-g~  211 (226)
T 2fwv_A          134 ADPYDPSESQAIELLLAHSAGYVELFYGRPRT-QSSWELVTDALARSRSGVLVGGAKRLYGIVEGGDLAYVEERVDA-DG  211 (226)
T ss_dssp             C----------EEEEEEETTTEEEEEEEEEEE-TTEEEEEEEEEEECTTSCCCCCEEEEEEECTTSCEEEEEEEECT-TS
T ss_pred             CCccCCCCCCeEEEEEEeCCceEEEEEEEcCC-CceEEEEEccEEecCccccccccEEEEEEcCCCcEEEEEEeecC-CC
Confidence            87       78999999999999999999974 26999999999874   56999999999995 899999999999 99


Q ss_pred             CcccceeeeEEeC
Q 045829          149 SLRPHLKAVLRKL  161 (161)
Q Consensus       149 ~l~~hlsa~l~rv  161 (161)
                      ||++||||+|+||
T Consensus       212 pl~~hlsa~L~Rv  224 (226)
T 2fwv_A          212 GLVPHLSARLSRF  224 (226)
T ss_dssp             CEEEEEEEEEEEE
T ss_pred             CcceeeEEEEEec
Confidence            9999999999996

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	161
d2a13a1	153	b.60.1.8 (A:14-166) Hypothetical protein At1g79260	3e-58
d2fr2a1	161	b.60.1.8 (A:4-164) Hypothetical protein Rv2717c {M	2e-51

>d2a13a1 b.60.1.8 (A:14-166) Hypothetical protein At1g79260 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 153

class: All beta proteins
fold: Lipocalins
superfamily: Lipocalins
family: Rv2717c-like
domain: Hypothetical protein At1g79260
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  176 bits (448), Expect = 3e-58
 Identities = 116/154 (75%), Positives = 134/154 (87%), Gaps = 2/154 (1%)

Query: 8   PVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGE 67
           PVHP +AP+SYLLGTWRGQG G YPTI +F YGEE+ F+HSG KPVIAYTQKTWKL SG 
Sbjct: 2   PVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSG-KPVIAYTQKTWKLESGA 60

Query: 68  PMHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSR 127
           PMHAESGY+RP PDGSIEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV+E+SR
Sbjct: 61  PMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVKEISR 120

Query: 128 VFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL 161
            FELV+G+L YVV+M+T     L+PHLKA+L KL
Sbjct: 121 EFELVDGKLSYVVRMSTT-TNPLQPHLKAILDKL 153

>d2fr2a1 b.60.1.8 (A:4-164) Hypothetical protein Rv2717c {Mycobacterium tuberculosis [TaxId: 1773]} Length = 161

class: All beta proteins
fold: Lipocalins
superfamily: Lipocalins
family: Rv2717c-like
domain: Hypothetical protein Rv2717c
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  159 bits (404), Expect = 2e-51
 Identities = 60/160 (37%), Positives = 92/160 (57%), Gaps = 10/160 (6%)

Query: 9   VHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEP 68
           + PA+  +S LLG+W G+G+G YPTI  F+Y EE+ F H G KP + YTQ+T  +  G+P
Sbjct: 2   LAPALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAHVG-KPFLTYTQQTRAVADGKP 60

Query: 69  MHAESGYWRPNPDGSIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVG--------NAS 120
           +H+E+GY R    G +E+V+A  +G+ E++ GTY+    VI+L+              A 
Sbjct: 61  LHSETGYLRVCRPGCVELVLAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAK 120

Query: 121 KVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRK 160
           +V  + R + +   EL Y +QM       L+ HL AVL +
Sbjct: 121 EVTALDRSYRIDGDELSYSLQMRAV-GQPLQDHLAAVLHR 159

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	161
d2a13a1	153	Hypothetical protein At1g79260 {Thale cress (Arabi	100.0
d2fr2a1	161	Hypothetical protein Rv2717c {Mycobacterium tuberc	100.0

>d2a13a1 b.60.1.8 (A:14-166) Hypothetical protein At1g79260 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Lipocalins
superfamily: Lipocalins
family: Rv2717c-like
domain: Hypothetical protein At1g79260
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-60  Score=366.69  Aligned_cols=153  Identities=75%  Similarity=1.236  Sum_probs=149.4

Q ss_pred             CCCCCccccccceeeEEEeeeeecCCCCCcccceEEEEEEecCCcCceEEEEEEEECCCCCCceeeeeEEEeCCCCCEEE
Q 045829            7 VPVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEV   86 (161)
Q Consensus         7 ~~L~p~l~PLawLlG~W~G~G~~~yP~~~~~~y~Eei~fs~~~G~p~L~y~s~~w~~~~g~p~h~EtGfwr~~p~~~ve~   86 (161)
                      |+|||+|.||+||||+|+|+|++.||++++|+|+|+|+|+| +|+|||+|+|++|++++++|+|+|+||||++|+++|++
T Consensus         1 p~l~p~L~PLa~LvG~W~G~G~~~yP~~~~~~y~e~i~fs~-~G~p~L~Y~s~~w~~d~~~p~h~E~Gfwr~~p~~~ve~   79 (153)
T d2a13a1           1 PPVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSH-SGKPVIAYTQKTWKLESGAPMHAESGYFRPRPDGSIEV   79 (153)
T ss_dssp             CCCCTTTGGGGGGCEEEEEEEEEEETTEEEEEEEEEEEEEC-CSSSCEEEEEEEECTTTCCEEEEEEEEEEECTTSEEEE
T ss_pred             CCCCccchhcceeeEEEEeeccccCCCCCCeEeEEEEEEEC-CCCCeEEEEEEEEeCCCCCcceeeeEEEEECCCCeEEE
Confidence            68999999999999999999999999999999999999999 69999999999999999999999999999999999999


Q ss_pred             EEEeCCceEEEEeEEecCCCCeEEEEeeeeeccccccceeEEEEEECCeEEEEEEeeecCCCCcccceeeeEEeC
Q 045829           87 VIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLRKL  161 (161)
Q Consensus        87 ~la~p~G~~ei~~G~~~~~~~~i~l~t~~i~~a~~v~~~~R~f~l~~~~L~~~~~ma~~~~~~l~~hlsa~l~rv  161 (161)
                      +++||+|++||++|++++++.+|+|.+++|++++.++..+|+|+|+||+|+|+++||+. ++||++|+||+|+||
T Consensus        80 ~la~p~G~~ei~~G~~~~~~~~i~l~~~~v~~~~~~~~~~R~y~l~~g~L~~~~~ma~~-g~~l~~h~sa~l~RV  153 (153)
T d2a13a1          80 VIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKVKEISREFELVDGKLSYVVRMSTT-TNPLQPHLKAILDKL  153 (153)
T ss_dssp             EEEETTSCEEEEEEEEETTTTEEEEEEEEEESCSSEEEEEEEEEEETTEEEEEEEEEES-SSCSEEEEEEEEEEC
T ss_pred             EEEeCCCcEEEEEeeecCCCcEEEEEEeeEecCcccceeEEEEEEECCEEEEEEEeecc-CCCCCceeEEEEEeC
Confidence            99999999999999998778899999999999999999999999999999999999999 999999999999997

>d2fr2a1 b.60.1.8 (A:4-164) Hypothetical protein Rv2717c {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: Lipocalins
superfamily: Lipocalins
family: Rv2717c-like
domain: Hypothetical protein Rv2717c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.1e-58  Score=358.23  Aligned_cols=152  Identities=40%  Similarity=0.748  Sum_probs=144.4

Q ss_pred             CCCCccccccceeeEEEeeeeecCCCCCcccceEEEEEEecCCcCceEEEEEEEECCCCCCceeeeeEEEeCCCCCEEEE
Q 045829            8 PVHPAIAPISYLLGTWRGQGSGGYPTINAFDYGEELNFTHSGGKPVIAYTQKTWKLGSGEPMHAESGYWRPNPDGSIEVV   87 (161)
Q Consensus         8 ~L~p~l~PLawLlG~W~G~G~~~yP~~~~~~y~Eei~fs~~~G~p~L~y~s~~w~~~~g~p~h~EtGfwr~~p~~~ve~~   87 (161)
                      ||||+|.||+||||+|+|+|++.||++++|.|+|+|+|+| +|+|||+|+|++|++++++|+|+|+||||++|+++|+++
T Consensus         1 ~L~p~L~PLa~LvG~W~G~G~~~~P~~~~~~y~e~i~fs~-~G~p~L~y~s~~w~~~~~~p~h~E~Gywr~~~~~~ve~~   79 (161)
T d2fr2a1           1 DLAPALQALSPLLGSWAGRGAGKYPTIRPFEYLEEVVFAH-VGKPFLTYTQQTRAVADGKPLHSETGYLRVCRPGCVELV   79 (161)
T ss_dssp             CCCGGGGGGGGGCEEEEEEEEECCTTSCCEEEEEEEEEEE-CSSSEEEEEEEEEETTTCCEEEEEEEEEEESSTTEEEEE
T ss_pred             CCChhhhhcceeeEEEEEeeeccCCCCCcEEEEEEEEEEC-CCCCeEEEEEEEEECCCCCcceeeeEEEEECCCCcEEEE
Confidence            7999999999999999999999999999999999999999 599999999999999999999999999999999999999


Q ss_pred             EEeCCceEEEEeEEecCCCCeEEEEeee-----eec---cccccceeEEEEEECCeEEEEEEeeecCCCCcccceeeeEE
Q 045829           88 IAQSTGLVEVQKGTYNAEEKVIKLQSEL-----VGN---ASKVREVSRVFELVNGELRYVVQMATNHLTSLRPHLKAVLR  159 (161)
Q Consensus        88 la~p~G~~ei~~G~~~~~~~~i~l~t~~-----i~~---a~~v~~~~R~f~l~~~~L~~~~~ma~~~~~~l~~hlsa~l~  159 (161)
                      ++||+|+++||+|+++..+++|+|.++.     +++   +++|++.+|+|+|++|+|+|+++||+. ++||++||||+||
T Consensus        80 la~p~G~~el~~G~~~~~g~~i~l~~~~~~~~~~~~~~~a~~v~~~~R~y~l~~g~L~~~~dma~~-g~~l~~hlsa~L~  158 (161)
T d2fr2a1          80 LAHPSGITEIEVGTYSVTGDVIELELSTRADGSIGLAPTAKEVTALDRSYRIDGDELSYSLQMRAV-GQPLQDHLAAVLH  158 (161)
T ss_dssp             EEETTTEEEEEEEEEEEETTEEEEEEETTTTCEEEECTTSCCEEEEEEEEEEETTEEEEEEEEEET-TEEEEEEEEEEEE
T ss_pred             EEeCCCeEEEEEeeccCCCCEEEEEEeccceeeEeecCCcccceeEEEEEEEECCEEEEEEEeEeC-CCCCCceEEEEEE
Confidence            9999999999999876668899999885     343   457999999999999999999999999 9999999999999


Q ss_pred             eC
Q 045829          160 KL  161 (161)
Q Consensus       160 rv  161 (161)
                      ||
T Consensus       159 Rv  160 (161)
T d2fr2a1         159 RQ  160 (161)
T ss_dssp             EC
T ss_pred             ec
Confidence            97