Citrus Sinensis ID: 045836
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 154 | ||||||
| 224079702 | 145 | predicted protein [Populus trichocarpa] | 0.935 | 0.993 | 0.791 | 4e-64 | |
| 15218828 | 146 | glutathione S-transferase [Arabidopsis t | 0.922 | 0.972 | 0.788 | 8e-64 | |
| 297838189 | 146 | hypothetical protein ARALYDRAFT_475688 [ | 0.941 | 0.993 | 0.765 | 2e-63 | |
| 238478980 | 162 | glutathione S-transferase [Arabidopsis t | 0.922 | 0.876 | 0.708 | 1e-60 | |
| 255570471 | 146 | microsomal glutathione s-transferase, pu | 0.948 | 1.0 | 0.739 | 3e-59 | |
| 449445098 | 145 | PREDICTED: microsomal glutathione S-tran | 0.928 | 0.986 | 0.755 | 1e-57 | |
| 238478982 | 194 | glutathione S-transferase [Arabidopsis t | 0.915 | 0.726 | 0.592 | 3e-57 | |
| 224134657 | 139 | predicted protein [Populus trichocarpa] | 0.902 | 1.0 | 0.726 | 8e-57 | |
| 225466285 | 145 | PREDICTED: microsomal glutathione S-tran | 0.935 | 0.993 | 0.694 | 8e-55 | |
| 6686399 | 146 | F1E22.17 [Arabidopsis thaliana] | 0.896 | 0.945 | 0.711 | 1e-54 |
| >gi|224079702|ref|XP_002305918.1| predicted protein [Populus trichocarpa] gi|222848882|gb|EEE86429.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 249 bits (635), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 114/144 (79%), Positives = 129/144 (89%)
Query: 11 AATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNC 70
A + P EYGYV VLV YCFLNFWMGFQVG+ARKKYKVPYPTLYA+ESENK+AKLFNC
Sbjct: 2 AGVEMFPKEYGYVVFVLVAYCFLNFWMGFQVGSARKKYKVPYPTLYAIESENKDAKLFNC 61
Query: 71 VQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIG 130
VQRGHQNSLE+MPVFF+LM++GG++HPCVCA LGSLF VTR+FYF GYATGDP+ RL IG
Sbjct: 62 VQRGHQNSLEMMPVFFLLMVLGGIRHPCVCAALGSLFLVTRYFYFTGYATGDPKNRLNIG 121
Query: 131 KYGFLALLGLMVCTISFGINQLRG 154
KYGFLA+LGL+ CTISFGI+ LRG
Sbjct: 122 KYGFLAVLGLVGCTISFGISLLRG 145
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15218828|ref|NP_176758.1| glutathione S-transferase [Arabidopsis thaliana] gi|25991925|gb|AAN76990.1|AF461148_1 MAPEG-like protein [Arabidopsis thaliana] gi|14517464|gb|AAK62622.1| At1g65820/F1E22_4 [Arabidopsis thaliana] gi|17978909|gb|AAL47424.1| At1g65820/F1E22_4 [Arabidopsis thaliana] gi|21617891|gb|AAM66941.1| glutathione-s-transferase, putative [Arabidopsis thaliana] gi|332196306|gb|AEE34427.1| glutathione S-transferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|297838189|ref|XP_002886976.1| hypothetical protein ARALYDRAFT_475688 [Arabidopsis lyrata subsp. lyrata] gi|297332817|gb|EFH63235.1| hypothetical protein ARALYDRAFT_475688 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|238478980|ref|NP_001154451.1| glutathione S-transferase [Arabidopsis thaliana] gi|332196307|gb|AEE34428.1| glutathione S-transferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|255570471|ref|XP_002526194.1| microsomal glutathione s-transferase, putative [Ricinus communis] gi|223534498|gb|EEF36198.1| microsomal glutathione s-transferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|449445098|ref|XP_004140310.1| PREDICTED: microsomal glutathione S-transferase 3-like [Cucumis sativus] gi|449525210|ref|XP_004169611.1| PREDICTED: microsomal glutathione S-transferase 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|238478982|ref|NP_001154452.1| glutathione S-transferase [Arabidopsis thaliana] gi|332196308|gb|AEE34429.1| glutathione S-transferase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|224134657|ref|XP_002327458.1| predicted protein [Populus trichocarpa] gi|222836012|gb|EEE74433.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|225466285|ref|XP_002273456.1| PREDICTED: microsomal glutathione S-transferase 3 isoform 1 [Vitis vinifera] gi|296088277|emb|CBI36503.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|6686399|gb|AAF23833.1|AC007234_5 F1E22.17 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 154 | ||||||
| TAIR|locus:2018566 | 194 | AT1G65820 "AT1G65820" [Arabido | 0.935 | 0.742 | 0.695 | 7e-54 | |
| ZFIN|ZDB-GENE-040426-2767 | 150 | mgst3 "microsomal glutathione | 0.844 | 0.866 | 0.451 | 4.5e-27 | |
| UNIPROTKB|A8JHR4 | 150 | CHLREDRAFT_154723 "Glutathione | 0.915 | 0.94 | 0.439 | 6.6e-26 | |
| ZFIN|ZDB-GENE-061215-48 | 140 | zgc:158387 "zgc:158387" [Danio | 0.837 | 0.921 | 0.4 | 2.2e-25 | |
| UNIPROTKB|Q6DDA5 | 147 | mgst3 "Microsomal glutathione | 0.824 | 0.863 | 0.442 | 4.2e-24 | |
| UNIPROTKB|Q3T100 | 152 | MGST3 "Microsomal glutathione | 0.870 | 0.881 | 0.423 | 5.3e-24 | |
| UNIPROTKB|Q2EN77 | 151 | MGST3 "Uncharacterized protein | 0.824 | 0.841 | 0.446 | 5.3e-24 | |
| MGI|MGI:1913697 | 153 | Mgst3 "microsomal glutathione | 0.824 | 0.830 | 0.419 | 6.8e-24 | |
| RGD|1306373 | 152 | Mgst3 "microsomal glutathione | 0.824 | 0.835 | 0.412 | 2.9e-23 | |
| UNIPROTKB|O14880 | 152 | MGST3 "Microsomal glutathione | 0.870 | 0.881 | 0.416 | 4.8e-23 |
| TAIR|locus:2018566 AT1G65820 "AT1G65820" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 103/148 (69%), Positives = 125/148 (84%)
Query: 9 VAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLF 68
+AA T+FLP EYGYV LVLVFYCFLN WMG QVG ARK+Y VPYPTLYA+ESENK+AKLF
Sbjct: 1 MAAITEFLPKEYGYVVLVLVFYCFLNLWMGAQVGRARKRYNVPYPTLYAIESENKDAKLF 60
Query: 69 NCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLT 128
NCVQRGHQNSLE+MP++F+LMI+GG+KHPC+C LG L+ V+RFFYFKGYATGDP KRLT
Sbjct: 61 NCVQRGHQNSLEMMPMYFILMILGGMKHPCICTGLGLLYNVSRFFYFKGYATGDPMKRLT 120
Query: 129 IG--KYGFL-ALLGLM-VCTISFGINQL 152
IG FL ++L L+ +C+ S +N++
Sbjct: 121 IGFSHSSFLYSVLYLLRLCSTSSSLNRV 148
|
|
| ZFIN|ZDB-GENE-040426-2767 mgst3 "microsomal glutathione S-transferase 3" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|A8JHR4 CHLREDRAFT_154723 "Glutathione S-transferase" [Chlamydomonas reinhardtii (taxid:3055)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-061215-48 zgc:158387 "zgc:158387" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q6DDA5 mgst3 "Microsomal glutathione S-transferase 3" [Xenopus (Silurana) tropicalis (taxid:8364)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q3T100 MGST3 "Microsomal glutathione S-transferase 3" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2EN77 MGST3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:1913697 Mgst3 "microsomal glutathione S-transferase 3" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| RGD|1306373 Mgst3 "microsomal glutathione S-transferase 3" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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| UNIPROTKB|O14880 MGST3 "Microsomal glutathione S-transferase 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pm.C_LG_IV0295 | hypothetical protein (146 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
| gw1.I.2970.1 | • | 0.899 | |||||||||
| gw1.145.154.1 | • | 0.899 | |||||||||
| PtrcGpx1_1 | • | 0.899 | |||||||||
| PtrcGR2 | • | 0.899 | |||||||||
| fgenesh4_pg.C_LG_V000227 | • | 0.899 | |||||||||
| PtrcGpx3_2 | • | 0.899 | |||||||||
| PtrcGR1 | • | 0.899 | |||||||||
| PtrcGpx5 | • | 0.899 | |||||||||
| PtrcGpx4 | • | 0.899 | |||||||||
| PtrcGpx2_1 | • | 0.899 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 154 | |||
| pfam01124 | 123 | pfam01124, MAPEG, MAPEG family | 5e-21 |
| >gnl|CDD|216311 pfam01124, MAPEG, MAPEG family | Back alignment and domain information |
|---|
Score = 82.3 bits (204), Expect = 5e-21
Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 3/123 (2%)
Query: 26 VLVFYCFLNFWMGFQVGAARKKYKVPYPTLYA-VESENKEAKLFNCVQRGHQNSLELMPV 84
+ L + VG ARKK KV + ++ F QR HQN+LE +P+
Sbjct: 1 WALLLALLLLVLSLLVGKARKKAKVGKGDGSPPRDLDDPLPPEFERAQRAHQNTLENLPL 60
Query: 85 FFMLMIVGGLKH-PCVCAVLGSLFTVTRFFYFKGYATGD-PQKRLTIGKYGFLALLGLMV 142
F +++ GL P + A+L LF V R + GYATG+ P R GFLALL L +
Sbjct: 61 FLAALLLAGLTGSPGLAALLAWLFVVARVLHAVGYATGNIPPLRSLGFALGFLALLALAL 120
Query: 143 CTI 145
+
Sbjct: 121 LAL 123
|
This family is has been called MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism). It includes proteins such as Prostaglandin E synthase. This enzyme catalyzes the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity. Length = 123 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 154 | |||
| PF01124 | 129 | MAPEG: MAPEG family; InterPro: IPR001129 This entr | 99.88 | |
| COG3788 | 131 | Uncharacterized relative of glutathione S-transfer | 99.79 | |
| COG3686 | 125 | Predicted membrane protein [Function unknown] | 99.68 | |
| COG5331 | 139 | Uncharacterized protein conserved in bacteria [Fun | 87.88 |
| >PF01124 MAPEG: MAPEG family; InterPro: IPR001129 This entry represents a widespread superfamily known as MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism) [] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-21 Score=142.05 Aligned_cols=122 Identities=31% Similarity=0.412 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccc--ccchhhhHHHhHHHHhhhhhhhhHHHHHHHHHHHHhh--hHHHH
Q 045836 25 LVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAV--ESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLK--HPCVC 100 (154)
Q Consensus 25 l~~~l~~l~~~~~s~~V~~~R~k~~~~~p~~~~~--~~~~~~~~~~~ra~RAH~N~~E~~p~fl~~~ll~~l~--~p~~~ 100 (154)
+.+.+..+..++++..+++.|.+.+...|+.+.+ +.+++++++++|++|||+|++||+|+|+++++++.+. ++..+
T Consensus 3 ~~~~~l~~~~~~l~~~v~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~R~~ra~~N~~E~~~~f~~~~~~~~~~g~~~~~~ 82 (129)
T PF01124_consen 3 AWSALLVLLLFYLSYIVGAARFKAKVKGGEGDANPRDNPPTLPPWLERAQRAHQNFLENLPLFLVAVLLAILTGASPSLA 82 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHCCHHHTTTSSSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-T-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCcccccccCcHHHHHHHHHHHhhHhhHHHHHHHHHHHHHhCCcHHHH
Confidence 3455556677888899999999999988764432 2234567789999999999999999999999999998 56899
Q ss_pred HHHHHHHHHHHHHHhHhhccC-CCCCchhhhHHHHHHHHHHHHHHHH
Q 045836 101 AVLGSLFTVTRFFYFKGYATG-DPQKRLTIGKYGFLALLGLMVCTIS 146 (154)
Q Consensus 101 ~~~g~~~~~gRi~y~~gY~~g-~p~~R~~gg~~~~~~~l~l~~~~~~ 146 (154)
..++.+|+++|+.|..+|..+ .|..|+.++..+..+.+.+.+.++|
T Consensus 83 ~~l~~~~~~~R~~y~~~y~~~~~~~~R~~~~~~~~~~~~~l~~~~~~ 129 (129)
T PF01124_consen 83 ALLAWVFVVARVAYAVGYIAGNIPPLRSLGFLVGLLCLLALALAALY 129 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSSSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999999987 6779999667888888888877664
|
Included are: 5-lipoxygenase activating protein (gene FLAP), which seems to be required for the activation of 5-lipoxygenase. Leukotriene C4 synthase (2.5.1.37 from EC), which catalyses the production of LTC4 from LTA4. Microsomal glutathione S-transferase II (2.5.1.18 from EC) (GST-II), which also produces LTC4 from LTA4. Prostaglandin E synthase, which catalyses the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity.; PDB: 3DWW_A 2Q7R_D 2Q7M_B 2PNO_J 3B29_A 3HKK_A 2UUI_A 3PCV_A 2UUH_A 3LEO_A .... |
| >COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily [General function prediction only] | Back alignment and domain information |
|---|
| >COG3686 Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >COG5331 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 154 | |||
| 3pcv_A | 156 | Leukotriene C4 synthase; membrane protein, helix b | 2e-32 | |
| 2q7r_A | 161 | Arachidonate 5-lipoxygenase-activating protein; fl | 6e-29 | |
| 3dww_A | 158 | Prostaglandin E synthase; membrane protein, four h | 1e-04 | |
| 2h8a_A | 154 | Microsomal glutathione S-transferase 1; membrane p | 6e-04 |
| >3pcv_A Leukotriene C4 synthase; membrane protein, helix bundle, HOMO trimer, MGST, mapeg, LY; HET: GSH LMT; 1.90A {Homo sapiens} PDB: 2pno_A* 3b29_A* 2uui_A* 2uuh_A* 3hkk_A* 3leo_A* Length = 156 | Back alignment and structure |
|---|
Score = 112 bits (280), Expect = 2e-32
Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 9/138 (6%)
Query: 16 LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGH 75
+ E +A V + L + QV +AR+ ++V P F V R
Sbjct: 1 MKDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPE-------FERVYRAQ 53
Query: 76 QNSLELMPVFFMLMIVGGLK-HPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGF 134
N E P+F + V G+ H A+ G ++ R YF+GYA Q RL
Sbjct: 54 VNCSEYFPLFLATLWVAGIFFHEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASA 112
Query: 135 LALLGLMVCTISFGINQL 152
AL L+ +
Sbjct: 113 RALWLLVALAALGLLAHF 130
|
| >2q7r_A Arachidonate 5-lipoxygenase-activating protein; flap, mapeg, membrane protein, lipid transport; HET: 3CS; 4.00A {Homo sapiens} SCOP: f.56.1.1 PDB: 2q7m_A* Length = 161 | Back alignment and structure |
|---|
| >3dww_A Prostaglandin E synthase; membrane protein, four helix bundle, isomerase, membrane, transmembrane; HET: GSH; 3.50A {Homo sapiens} Length = 158 | Back alignment and structure |
|---|
| >2h8a_A Microsomal glutathione S-transferase 1; membrane protein; HET: GSH; 3.20A {Rattus norvegicus} SCOP: f.56.1.1 Length = 154 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 154 | |||
| 2q7r_A | 161 | Arachidonate 5-lipoxygenase-activating protein; fl | 99.97 | |
| 3pcv_A | 156 | Leukotriene C4 synthase; membrane protein, helix b | 99.97 | |
| 3dww_A | 158 | Prostaglandin E synthase; membrane protein, four h | 99.91 | |
| 2h8a_A | 154 | Microsomal glutathione S-transferase 1; membrane p | 99.86 |
| >2q7r_A Arachidonate 5-lipoxygenase-activating protein; flap, mapeg, membrane protein, lipid transport; HET: 3CS; 4.00A {Homo sapiens} SCOP: f.56.1.1 PDB: 2q7m_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.2e-32 Score=205.26 Aligned_cols=128 Identities=17% Similarity=0.206 Sum_probs=115.1
Q ss_pred ccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccchhhhHHHhHHHHhhhhhhhhHHHHHHHHHHH
Q 045836 13 TQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVG 92 (154)
Q Consensus 13 ~~~~p~~~~~v~l~~~l~~l~~~~~s~~V~~~R~k~~~~~p~~~~~~~~~~~~~~~~ra~RAH~N~~E~~p~fl~~~ll~ 92 (154)
.++++ ||+++.+++++.++++++++++|+++|+|+|+++|.+++|+ +|||+||||+|++||+|+|+++++++
T Consensus 3 ~~~~~-e~~~~~l~a~l~~l~~~~~s~~V~~~R~k~~V~~p~~~g~~-------~f~R~~RAh~N~lE~~P~fl~llll~ 74 (161)
T 2q7r_A 3 QETVG-NVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTL-------AFERVYTANQNCVDAYPTFLAVLWSA 74 (161)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCCSCCCH-------HHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred eeeec-cHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCCCCCCCCCcH-------HHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 44554 99999999999999999999999999999999999877654 49999999999999999999999999
Q ss_pred Hhh-hHHHHHHHHHHHHHHHHHHhHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 045836 93 GLK-HPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGI 149 (154)
Q Consensus 93 ~l~-~p~~~~~~g~~~~~gRi~y~~gY~~g~p~~R~~gg~~~~~~~l~l~~~~~~~~~ 149 (154)
++. +|.+++.+|.+|+++|++|+.||.. +|++|..|+.+++++.+.+++++++...
T Consensus 75 ~l~g~~~~a~~~G~i~l~gRily~~gY~~-~p~~R~~G~~~~~l~l~~l~~~~l~gi~ 131 (161)
T 2q7r_A 75 GLLCSQVPAAFAGLMYLFVRQKYFVGYLG-ERTQSTPGYIFGKRIILFLFLMSVAGIF 131 (161)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHHHHHHTCC-SSSCCCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred HHcCChHHHHHHHHHHHHHHHHHHHHHhC-CCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999 7899999999999999999999986 5889999556789999888888887654
|
| >3pcv_A Leukotriene C4 synthase; membrane protein, helix bundle, HOMO trimer, MGST, mapeg, LY; HET: GSH LMT; 1.90A {Homo sapiens} PDB: 2pno_A* 3b29_A* 2uui_A* 2uuh_A* 3hkk_A* 3leo_A* | Back alignment and structure |
|---|
| >3dww_A Prostaglandin E synthase; membrane protein, four helix bundle, isomerase, membrane, transmembrane; HET: GSH; 3.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2h8a_A Microsomal glutathione S-transferase 1; membrane protein; HET: GSH; 3.20A {Rattus norvegicus} SCOP: f.56.1.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 154 | ||||
| d2uuia1 | 146 | f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human | 9e-30 | |
| d2q7ra1 | 139 | f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-act | 5e-25 | |
| d2h8aa1 | 139 | f.56.1.1 (A:9-147) Microsomal glutathione S-transf | 7e-04 |
| >d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 146 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: MAPEG domain-like superfamily: MAPEG domain-like family: MAPEG domain domain: Leukotriene C4 synthase species: Human (Homo sapiens) [TaxId: 9606]
Score = 103 bits (259), Expect = 9e-30
Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 9/135 (6%)
Query: 19 EYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNS 78
E +A V + L + QV +AR+ ++V P F V R N
Sbjct: 3 EVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPE-------FERVYRAQVNC 55
Query: 79 LELMPVFFMLMIVGGLK-HPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLAL 137
E P+F + V G+ H A+ G ++ R YF+GYA Q RL AL
Sbjct: 56 SEYFPLFLATLWVAGIFFHEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARAL 114
Query: 138 LGLMVCTISFGINQL 152
L+ +
Sbjct: 115 WLLVALAALGLLAHF 129
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| >d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating protein, FLAP {Human (Homo sapiens) [TaxId: 9606]} Length = 139 | Back information, alignment and structure |
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| >d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 139 | Back information, alignment and structure |
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Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 154 | |||
| d2q7ra1 | 139 | Arachidonate 5-lipoxygenase-activating protein, FL | 99.98 | |
| d2uuia1 | 146 | Leukotriene C4 synthase {Human (Homo sapiens) [Tax | 99.97 | |
| d2h8aa1 | 139 | Microsomal glutathione S-transferase 1 {Rat (Rattu | 99.7 |
| >d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating protein, FLAP {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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class: Membrane and cell surface proteins and peptides fold: MAPEG domain-like superfamily: MAPEG domain-like family: MAPEG domain domain: Arachidonate 5-lipoxygenase-activating protein, FLAP species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98 E-value=1.7e-32 Score=202.85 Aligned_cols=128 Identities=19% Similarity=0.218 Sum_probs=112.9
Q ss_pred cccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccchhhhHHHhHHHHhhhhhhhhHHHHHHHHHHHH
Q 045836 14 QFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGG 93 (154)
Q Consensus 14 ~~~p~~~~~v~l~~~l~~l~~~~~s~~V~~~R~k~~~~~p~~~~~~~~~~~~~~~~ra~RAH~N~~E~~p~fl~~~ll~~ 93 (154)
.+..+++-++.+++++.++++.|++++|+++|+|+|+++|++++|++ |||++|||+|++||.|+|++++++++
T Consensus 3 ~~~~~~~vl~~~vt~l~~~~~~~ls~~Vg~aR~k~~v~~p~~~g~~~-------f~ra~RaH~N~~E~~p~~L~~l~~~~ 75 (139)
T d2q7ra1 3 QETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLA-------FERVYTANQNCVDAYPTFLAVLWSAG 75 (139)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCCSCCCHH-------HHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCHH-------HHHHHHHHhhhHhhHHHHHHHHHHHH
Confidence 55667888889999999999999999999999999999999888775 99999999999999999999999999
Q ss_pred hh-hHHHHHHHHHHHHHHHHHHhHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 045836 94 LK-HPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGI 149 (154)
Q Consensus 94 l~-~p~~~~~~g~~~~~gRi~y~~gY~~g~p~~R~~gg~~~~~~~l~l~~~~~~~~~ 149 (154)
+. +|.+++.+|.+|++||+.|+.|| +++|++|..|..++..+.+.++++++...+
T Consensus 76 l~~~~~~a~~~G~~~~vgR~~ha~Gy-~~~~~kR~~g~~~~~~~~~~L~~~a~~gi~ 131 (139)
T d2q7ra1 76 LLCSQVPAAFAGLMYLFVRQKYFVGY-LGERTQSTPGYIFGKRIILFLFLMSVAGIF 131 (139)
T ss_dssp HHSCHHHHHHHHHHHHHHHHHHHHHT-CCSSSCCCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHHHHHHHHH-hCCcccCcCCchHHHHHHHHHHHHHHHHHH
Confidence 98 68899999999999999999999 467999988445667777777777766544
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| >d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
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| >d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
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