Citrus Sinensis ID: 045836


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150----
MFSSIDSTVAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGINQLRG
ccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHcc
ccccccccHcHHHEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcc
MFSSIDSTVAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAarkkykvpyptlyavesenkeakLFNCvqrghqnsleLMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFfyfkgyatgdpqkrltigKYGFLALLGLMVCTISFGINQLRG
MFSSIDSTVAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGyatgdpqkrlTIGKYGFLALLGLMVCTISFGINQLRG
MFSSIDSTVAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGINQLRG
********VAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGIN****
********VAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGINQLRG
MFSSIDSTVAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGINQLRG
*F*SIDSTVAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGINQLRG
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooo
ooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiii
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooo
iiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooo
oooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiii
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MFSSIDSTVAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGINQLRG
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query154 2.2.26 [Sep-21-2011]
Q9CPU4153 Microsomal glutathione S- yes no 0.824 0.830 0.419 2e-23
Q3T100152 Microsomal glutathione S- yes no 0.870 0.881 0.423 2e-23
O14880152 Microsomal glutathione S- yes no 0.870 0.881 0.416 3e-22
Q2KJG4146 Microsomal glutathione S- no no 0.603 0.636 0.323 2e-05
>sp|Q9CPU4|MGST3_MOUSE Microsomal glutathione S-transferase 3 OS=Mus musculus GN=Mgst3 PE=1 SV=1 Back     alignment and function desciption
 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 74/131 (56%), Gaps = 4/131 (3%)

Query: 16  LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGH 75
           L  EYG+V L       +   +   VG ARKKYKV YP +Y+ + EN    +FNC+QR H
Sbjct: 4   LSKEYGFVLLTGAASFVMVLHLAINVGKARKKYKVEYPVMYSTDPEN--GHMFNCIQRAH 61

Query: 76  QNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRL--TIGKYG 133
           QN+LE+ P F   + VGG+ HP + + LG  + + R  Y  GY TGDP KR    +G   
Sbjct: 62  QNTLEVYPPFLFFLTVGGVYHPRIASGLGLAWIIGRVLYAYGYYTGDPSKRYRGAVGSLA 121

Query: 134 FLALLGLMVCT 144
             AL+G  VC+
Sbjct: 122 LFALMGTTVCS 132




Also functions as a glutathione peroxidase.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 1EC: 8
>sp|Q3T100|MGST3_BOVIN Microsomal glutathione S-transferase 3 OS=Bos taurus GN=MGST3 PE=2 SV=1 Back     alignment and function description
>sp|O14880|MGST3_HUMAN Microsomal glutathione S-transferase 3 OS=Homo sapiens GN=MGST3 PE=1 SV=1 Back     alignment and function description
>sp|Q2KJG4|MGST2_BOVIN Microsomal glutathione S-transferase 2 OS=Bos taurus GN=MGST2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query154
224079702145 predicted protein [Populus trichocarpa] 0.935 0.993 0.791 4e-64
15218828146 glutathione S-transferase [Arabidopsis t 0.922 0.972 0.788 8e-64
297838189146 hypothetical protein ARALYDRAFT_475688 [ 0.941 0.993 0.765 2e-63
238478980162 glutathione S-transferase [Arabidopsis t 0.922 0.876 0.708 1e-60
255570471146 microsomal glutathione s-transferase, pu 0.948 1.0 0.739 3e-59
449445098145 PREDICTED: microsomal glutathione S-tran 0.928 0.986 0.755 1e-57
238478982194 glutathione S-transferase [Arabidopsis t 0.915 0.726 0.592 3e-57
224134657139 predicted protein [Populus trichocarpa] 0.902 1.0 0.726 8e-57
225466285145 PREDICTED: microsomal glutathione S-tran 0.935 0.993 0.694 8e-55
6686399146 F1E22.17 [Arabidopsis thaliana] 0.896 0.945 0.711 1e-54
>gi|224079702|ref|XP_002305918.1| predicted protein [Populus trichocarpa] gi|222848882|gb|EEE86429.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  249 bits (635), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 114/144 (79%), Positives = 129/144 (89%)

Query: 11  AATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNC 70
           A  +  P EYGYV  VLV YCFLNFWMGFQVG+ARKKYKVPYPTLYA+ESENK+AKLFNC
Sbjct: 2   AGVEMFPKEYGYVVFVLVAYCFLNFWMGFQVGSARKKYKVPYPTLYAIESENKDAKLFNC 61

Query: 71  VQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIG 130
           VQRGHQNSLE+MPVFF+LM++GG++HPCVCA LGSLF VTR+FYF GYATGDP+ RL IG
Sbjct: 62  VQRGHQNSLEMMPVFFLLMVLGGIRHPCVCAALGSLFLVTRYFYFTGYATGDPKNRLNIG 121

Query: 131 KYGFLALLGLMVCTISFGINQLRG 154
           KYGFLA+LGL+ CTISFGI+ LRG
Sbjct: 122 KYGFLAVLGLVGCTISFGISLLRG 145




Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218828|ref|NP_176758.1| glutathione S-transferase [Arabidopsis thaliana] gi|25991925|gb|AAN76990.1|AF461148_1 MAPEG-like protein [Arabidopsis thaliana] gi|14517464|gb|AAK62622.1| At1g65820/F1E22_4 [Arabidopsis thaliana] gi|17978909|gb|AAL47424.1| At1g65820/F1E22_4 [Arabidopsis thaliana] gi|21617891|gb|AAM66941.1| glutathione-s-transferase, putative [Arabidopsis thaliana] gi|332196306|gb|AEE34427.1| glutathione S-transferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297838189|ref|XP_002886976.1| hypothetical protein ARALYDRAFT_475688 [Arabidopsis lyrata subsp. lyrata] gi|297332817|gb|EFH63235.1| hypothetical protein ARALYDRAFT_475688 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|238478980|ref|NP_001154451.1| glutathione S-transferase [Arabidopsis thaliana] gi|332196307|gb|AEE34428.1| glutathione S-transferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|255570471|ref|XP_002526194.1| microsomal glutathione s-transferase, putative [Ricinus communis] gi|223534498|gb|EEF36198.1| microsomal glutathione s-transferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449445098|ref|XP_004140310.1| PREDICTED: microsomal glutathione S-transferase 3-like [Cucumis sativus] gi|449525210|ref|XP_004169611.1| PREDICTED: microsomal glutathione S-transferase 3-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|238478982|ref|NP_001154452.1| glutathione S-transferase [Arabidopsis thaliana] gi|332196308|gb|AEE34429.1| glutathione S-transferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224134657|ref|XP_002327458.1| predicted protein [Populus trichocarpa] gi|222836012|gb|EEE74433.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225466285|ref|XP_002273456.1| PREDICTED: microsomal glutathione S-transferase 3 isoform 1 [Vitis vinifera] gi|296088277|emb|CBI36503.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|6686399|gb|AAF23833.1|AC007234_5 F1E22.17 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query154
TAIR|locus:2018566194 AT1G65820 "AT1G65820" [Arabido 0.935 0.742 0.695 7e-54
ZFIN|ZDB-GENE-040426-2767150 mgst3 "microsomal glutathione 0.844 0.866 0.451 4.5e-27
UNIPROTKB|A8JHR4150 CHLREDRAFT_154723 "Glutathione 0.915 0.94 0.439 6.6e-26
ZFIN|ZDB-GENE-061215-48140 zgc:158387 "zgc:158387" [Danio 0.837 0.921 0.4 2.2e-25
UNIPROTKB|Q6DDA5147 mgst3 "Microsomal glutathione 0.824 0.863 0.442 4.2e-24
UNIPROTKB|Q3T100152 MGST3 "Microsomal glutathione 0.870 0.881 0.423 5.3e-24
UNIPROTKB|Q2EN77151 MGST3 "Uncharacterized protein 0.824 0.841 0.446 5.3e-24
MGI|MGI:1913697153 Mgst3 "microsomal glutathione 0.824 0.830 0.419 6.8e-24
RGD|1306373152 Mgst3 "microsomal glutathione 0.824 0.835 0.412 2.9e-23
UNIPROTKB|O14880152 MGST3 "Microsomal glutathione 0.870 0.881 0.416 4.8e-23
TAIR|locus:2018566 AT1G65820 "AT1G65820" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
 Identities = 103/148 (69%), Positives = 125/148 (84%)

Query:     9 VAAATQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLF 68
             +AA T+FLP EYGYV LVLVFYCFLN WMG QVG ARK+Y VPYPTLYA+ESENK+AKLF
Sbjct:     1 MAAITEFLPKEYGYVVLVLVFYCFLNLWMGAQVGRARKRYNVPYPTLYAIESENKDAKLF 60

Query:    69 NCVQRGHQNSLELMPVFFMLMIVGGLKHPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLT 128
             NCVQRGHQNSLE+MP++F+LMI+GG+KHPC+C  LG L+ V+RFFYFKGYATGDP KRLT
Sbjct:    61 NCVQRGHQNSLEMMPMYFILMILGGMKHPCICTGLGLLYNVSRFFYFKGYATGDPMKRLT 120

Query:   129 IG--KYGFL-ALLGLM-VCTISFGINQL 152
             IG     FL ++L L+ +C+ S  +N++
Sbjct:   121 IGFSHSSFLYSVLYLLRLCSTSSSLNRV 148




GO:0002540 "leukotriene production involved in inflammatory response" evidence=IBA
GO:0004364 "glutathione transferase activity" evidence=ISS
GO:0004602 "glutathione peroxidase activity" evidence=IBA
GO:0019370 "leukotriene biosynthetic process" evidence=IBA
GO:0055114 "oxidation-reduction process" evidence=IBA
GO:0005773 "vacuole" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0016020 "membrane" evidence=IDA
GO:0005794 "Golgi apparatus" evidence=IDA
GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA
ZFIN|ZDB-GENE-040426-2767 mgst3 "microsomal glutathione S-transferase 3" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|A8JHR4 CHLREDRAFT_154723 "Glutathione S-transferase" [Chlamydomonas reinhardtii (taxid:3055)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-061215-48 zgc:158387 "zgc:158387" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|Q6DDA5 mgst3 "Microsomal glutathione S-transferase 3" [Xenopus (Silurana) tropicalis (taxid:8364)] Back     alignment and assigned GO terms
UNIPROTKB|Q3T100 MGST3 "Microsomal glutathione S-transferase 3" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|Q2EN77 MGST3 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
MGI|MGI:1913697 Mgst3 "microsomal glutathione S-transferase 3" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1306373 Mgst3 "microsomal glutathione S-transferase 3" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O14880 MGST3 "Microsomal glutathione S-transferase 3" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9CPU4MGST3_MOUSE2, ., 5, ., 1, ., 1, 80.41980.82460.8300yesno
Q3T100MGST3_BOVIN2, ., 5, ., 1, ., 1, 80.42330.87010.8815yesno
O14880MGST3_HUMAN2, ., 5, ., 1, ., 1, 80.41600.87010.8815yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pm.C_LG_IV0295
hypothetical protein (146 aa)
(Populus trichocarpa)
Predicted Functional Partners:
gw1.I.2970.1
hypothetical protein (547 aa)
       0.899
gw1.145.154.1
hypothetical protein (564 aa)
       0.899
PtrcGpx1_1
glutathione peroxidase (EC-1.11.1.9) (212 aa)
       0.899
PtrcGR2
glutathione reductase (EC-1.8.1.7) (499 aa)
       0.899
fgenesh4_pg.C_LG_V000227
hypothetical protein (624 aa)
       0.899
PtrcGpx3_2
RecName- Full=Glutathione peroxidase; (251 aa)
       0.899
PtrcGR1
glutathione reductase (EC-1.8.1.7) (562 aa)
       0.899
PtrcGpx5
glutathione peroxidase (170 aa)
       0.899
PtrcGpx4
RecName- Full=Glutathione peroxidase; (171 aa)
       0.899
PtrcGpx2_1
glutathione peroxidase (EC-1.11.1.9) (168 aa)
       0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query154
pfam01124123 pfam01124, MAPEG, MAPEG family 5e-21
>gnl|CDD|216311 pfam01124, MAPEG, MAPEG family Back     alignment and domain information
 Score = 82.3 bits (204), Expect = 5e-21
 Identities = 42/123 (34%), Positives = 59/123 (47%), Gaps = 3/123 (2%)

Query: 26  VLVFYCFLNFWMGFQVGAARKKYKVPYPTLYA-VESENKEAKLFNCVQRGHQNSLELMPV 84
             +    L   +   VG ARKK KV         + ++     F   QR HQN+LE +P+
Sbjct: 1   WALLLALLLLVLSLLVGKARKKAKVGKGDGSPPRDLDDPLPPEFERAQRAHQNTLENLPL 60

Query: 85  FFMLMIVGGLKH-PCVCAVLGSLFTVTRFFYFKGYATGD-PQKRLTIGKYGFLALLGLMV 142
           F   +++ GL   P + A+L  LF V R  +  GYATG+ P  R      GFLALL L +
Sbjct: 61  FLAALLLAGLTGSPGLAALLAWLFVVARVLHAVGYATGNIPPLRSLGFALGFLALLALAL 120

Query: 143 CTI 145
             +
Sbjct: 121 LAL 123


This family is has been called MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism). It includes proteins such as Prostaglandin E synthase. This enzyme catalyzes the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity. Length = 123

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 154
PF01124129 MAPEG: MAPEG family; InterPro: IPR001129 This entr 99.88
COG3788131 Uncharacterized relative of glutathione S-transfer 99.79
COG3686125 Predicted membrane protein [Function unknown] 99.68
COG5331139 Uncharacterized protein conserved in bacteria [Fun 87.88
>PF01124 MAPEG: MAPEG family; InterPro: IPR001129 This entry represents a widespread superfamily known as MAPEG (Membrane Associated Proteins in Eicosanoid and Glutathione metabolism) [] Back     alignment and domain information
Probab=99.88  E-value=1.1e-21  Score=142.05  Aligned_cols=122  Identities=31%  Similarity=0.412  Sum_probs=101.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcCCCCCCcccc--ccchhhhHHHhHHHHhhhhhhhhHHHHHHHHHHHHhh--hHHHH
Q 045836           25 LVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAV--ESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGGLK--HPCVC  100 (154)
Q Consensus        25 l~~~l~~l~~~~~s~~V~~~R~k~~~~~p~~~~~--~~~~~~~~~~~ra~RAH~N~~E~~p~fl~~~ll~~l~--~p~~~  100 (154)
                      +.+.+..+..++++..+++.|.+.+...|+.+.+  +.+++++++++|++|||+|++||+|+|+++++++.+.  ++..+
T Consensus         3 ~~~~~l~~~~~~l~~~v~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~R~~ra~~N~~E~~~~f~~~~~~~~~~g~~~~~~   82 (129)
T PF01124_consen    3 AWSALLVLLLFYLSYIVGAARFKAKVKGGEGDANPRDNPPTLPPWLERAQRAHQNFLENLPLFLVAVLLAILTGASPSLA   82 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCHCCHHHTTTSSSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-T-HHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhCCcccccCCCcccccccCcHHHHHHHHHHHhhHhhHHHHHHHHHHHHHhCCcHHHH
Confidence            3455556677888899999999999988764432  2234567789999999999999999999999999998  56899


Q ss_pred             HHHHHHHHHHHHHHhHhhccC-CCCCchhhhHHHHHHHHHHHHHHHH
Q 045836          101 AVLGSLFTVTRFFYFKGYATG-DPQKRLTIGKYGFLALLGLMVCTIS  146 (154)
Q Consensus       101 ~~~g~~~~~gRi~y~~gY~~g-~p~~R~~gg~~~~~~~l~l~~~~~~  146 (154)
                      ..++.+|+++|+.|..+|..+ .|..|+.++..+..+.+.+.+.++|
T Consensus        83 ~~l~~~~~~~R~~y~~~y~~~~~~~~R~~~~~~~~~~~~~l~~~~~~  129 (129)
T PF01124_consen   83 ALLAWVFVVARVAYAVGYIAGNIPPLRSLGFLVGLLCLLALALAALY  129 (129)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHC
Confidence            999999999999999999987 6779999667888888888877664



Included are: 5-lipoxygenase activating protein (gene FLAP), which seems to be required for the activation of 5-lipoxygenase. Leukotriene C4 synthase (2.5.1.37 from EC), which catalyses the production of LTC4 from LTA4. Microsomal glutathione S-transferase II (2.5.1.18 from EC) (GST-II), which also produces LTC4 from LTA4. Prostaglandin E synthase, which catalyses the synthesis of PGE2 from PGH2 (produced by cyclooxygenase from arachidonic acid). Because of structural similarities in the active sites of FLAP, LTC4 synthase and PGE synthase, substrates for each enzyme can compete with one another and modulate synthetic activity.; PDB: 3DWW_A 2Q7R_D 2Q7M_B 2PNO_J 3B29_A 3HKK_A 2UUI_A 3PCV_A 2UUH_A 3LEO_A ....

>COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily [General function prediction only] Back     alignment and domain information
>COG3686 Predicted membrane protein [Function unknown] Back     alignment and domain information
>COG5331 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query154
3pcv_A156 Leukotriene C4 synthase; membrane protein, helix b 2e-32
2q7r_A161 Arachidonate 5-lipoxygenase-activating protein; fl 6e-29
3dww_A158 Prostaglandin E synthase; membrane protein, four h 1e-04
2h8a_A154 Microsomal glutathione S-transferase 1; membrane p 6e-04
>3pcv_A Leukotriene C4 synthase; membrane protein, helix bundle, HOMO trimer, MGST, mapeg, LY; HET: GSH LMT; 1.90A {Homo sapiens} PDB: 2pno_A* 3b29_A* 2uui_A* 2uuh_A* 3hkk_A* 3leo_A* Length = 156 Back     alignment and structure
 Score =  112 bits (280), Expect = 2e-32
 Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 9/138 (6%)

Query: 16  LPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGH 75
           +  E   +A V +    L  +   QV +AR+ ++V  P              F  V R  
Sbjct: 1   MKDEVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPE-------FERVYRAQ 53

Query: 76  QNSLELMPVFFMLMIVGGLK-HPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGF 134
            N  E  P+F   + V G+  H    A+ G ++   R  YF+GYA    Q RL       
Sbjct: 54  VNCSEYFPLFLATLWVAGIFFHEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASA 112

Query: 135 LALLGLMVCTISFGINQL 152
            AL  L+       +   
Sbjct: 113 RALWLLVALAALGLLAHF 130


>2q7r_A Arachidonate 5-lipoxygenase-activating protein; flap, mapeg, membrane protein, lipid transport; HET: 3CS; 4.00A {Homo sapiens} SCOP: f.56.1.1 PDB: 2q7m_A* Length = 161 Back     alignment and structure
>3dww_A Prostaglandin E synthase; membrane protein, four helix bundle, isomerase, membrane, transmembrane; HET: GSH; 3.50A {Homo sapiens} Length = 158 Back     alignment and structure
>2h8a_A Microsomal glutathione S-transferase 1; membrane protein; HET: GSH; 3.20A {Rattus norvegicus} SCOP: f.56.1.1 Length = 154 Back     alignment and structure

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query154
2q7r_A161 Arachidonate 5-lipoxygenase-activating protein; fl 99.97
3pcv_A156 Leukotriene C4 synthase; membrane protein, helix b 99.97
3dww_A158 Prostaglandin E synthase; membrane protein, four h 99.91
2h8a_A154 Microsomal glutathione S-transferase 1; membrane p 99.86
>2q7r_A Arachidonate 5-lipoxygenase-activating protein; flap, mapeg, membrane protein, lipid transport; HET: 3CS; 4.00A {Homo sapiens} SCOP: f.56.1.1 PDB: 2q7m_A* Back     alignment and structure
Probab=99.97  E-value=8.2e-32  Score=205.26  Aligned_cols=128  Identities=17%  Similarity=0.206  Sum_probs=115.1

Q ss_pred             ccccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccchhhhHHHhHHHHhhhhhhhhHHHHHHHHHHH
Q 045836           13 TQFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVG   92 (154)
Q Consensus        13 ~~~~p~~~~~v~l~~~l~~l~~~~~s~~V~~~R~k~~~~~p~~~~~~~~~~~~~~~~ra~RAH~N~~E~~p~fl~~~ll~   92 (154)
                      .++++ ||+++.+++++.++++++++++|+++|+|+|+++|.+++|+       +|||+||||+|++||+|+|+++++++
T Consensus         3 ~~~~~-e~~~~~l~a~l~~l~~~~~s~~V~~~R~k~~V~~p~~~g~~-------~f~R~~RAh~N~lE~~P~fl~llll~   74 (161)
T 2q7r_A            3 QETVG-NVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTL-------AFERVYTANQNCVDAYPTFLAVLWSA   74 (161)
T ss_dssp             HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCCSCCCH-------HHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             eeeec-cHHHHHHHHHHHHHHHHHHHHHHHHHHhHcCCCCCCCCCcH-------HHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            44554 99999999999999999999999999999999999877654       49999999999999999999999999


Q ss_pred             Hhh-hHHHHHHHHHHHHHHHHHHhHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 045836           93 GLK-HPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGI  149 (154)
Q Consensus        93 ~l~-~p~~~~~~g~~~~~gRi~y~~gY~~g~p~~R~~gg~~~~~~~l~l~~~~~~~~~  149 (154)
                      ++. +|.+++.+|.+|+++|++|+.||.. +|++|..|+.+++++.+.+++++++...
T Consensus        75 ~l~g~~~~a~~~G~i~l~gRily~~gY~~-~p~~R~~G~~~~~l~l~~l~~~~l~gi~  131 (161)
T 2q7r_A           75 GLLCSQVPAAFAGLMYLFVRQKYFVGYLG-ERTQSTPGYIFGKRIILFLFLMSVAGIF  131 (161)
T ss_dssp             HHHSCHHHHHHHHHHHHHHHHHHHHHTCC-SSSCCCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred             HHcCChHHHHHHHHHHHHHHHHHHHHHhC-CCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999 7899999999999999999999986 5889999556789999888888887654



>3pcv_A Leukotriene C4 synthase; membrane protein, helix bundle, HOMO trimer, MGST, mapeg, LY; HET: GSH LMT; 1.90A {Homo sapiens} PDB: 2pno_A* 3b29_A* 2uui_A* 2uuh_A* 3hkk_A* 3leo_A* Back     alignment and structure
>3dww_A Prostaglandin E synthase; membrane protein, four helix bundle, isomerase, membrane, transmembrane; HET: GSH; 3.50A {Homo sapiens} Back     alignment and structure
>2h8a_A Microsomal glutathione S-transferase 1; membrane protein; HET: GSH; 3.20A {Rattus norvegicus} SCOP: f.56.1.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 154
d2uuia1146 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human 9e-30
d2q7ra1139 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-act 5e-25
d2h8aa1139 f.56.1.1 (A:9-147) Microsomal glutathione S-transf 7e-04
>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]} Length = 146 Back     information, alignment and structure

class: Membrane and cell surface proteins and peptides
fold: MAPEG domain-like
superfamily: MAPEG domain-like
family: MAPEG domain
domain: Leukotriene C4 synthase
species: Human (Homo sapiens) [TaxId: 9606]
 Score =  103 bits (259), Expect = 9e-30
 Identities = 34/135 (25%), Positives = 50/135 (37%), Gaps = 9/135 (6%)

Query: 19  EYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNS 78
           E   +A V +    L  +   QV +AR+ ++V  P              F  V R   N 
Sbjct: 3   EVALLAAVTLLGVLLQAYFSLQVISARRAFRVSPPLTTGPPE-------FERVYRAQVNC 55

Query: 79  LELMPVFFMLMIVGGLK-HPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLAL 137
            E  P+F   + V G+  H    A+ G ++   R  YF+GYA    Q RL        AL
Sbjct: 56  SEYFPLFLATLWVAGIFFHEGAAALCGLVYLFARLRYFQGYA-RSAQLRLAPLYASARAL 114

Query: 138 LGLMVCTISFGINQL 152
             L+       +   
Sbjct: 115 WLLVALAALGLLAHF 129


>d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating protein, FLAP {Human (Homo sapiens) [TaxId: 9606]} Length = 139 Back     information, alignment and structure
>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 139 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query154
d2q7ra1139 Arachidonate 5-lipoxygenase-activating protein, FL 99.98
d2uuia1146 Leukotriene C4 synthase {Human (Homo sapiens) [Tax 99.97
d2h8aa1139 Microsomal glutathione S-transferase 1 {Rat (Rattu 99.7
>d2q7ra1 f.56.1.1 (A:1-139) Arachidonate 5-lipoxygenase-activating protein, FLAP {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Membrane and cell surface proteins and peptides
fold: MAPEG domain-like
superfamily: MAPEG domain-like
family: MAPEG domain
domain: Arachidonate 5-lipoxygenase-activating protein, FLAP
species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.98  E-value=1.7e-32  Score=202.85  Aligned_cols=128  Identities=19%  Similarity=0.218  Sum_probs=112.9

Q ss_pred             cccCccchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCccccccchhhhHHHhHHHHhhhhhhhhHHHHHHHHHHHH
Q 045836           14 QFLPTEYGYVALVLVFYCFLNFWMGFQVGAARKKYKVPYPTLYAVESENKEAKLFNCVQRGHQNSLELMPVFFMLMIVGG   93 (154)
Q Consensus        14 ~~~p~~~~~v~l~~~l~~l~~~~~s~~V~~~R~k~~~~~p~~~~~~~~~~~~~~~~ra~RAH~N~~E~~p~fl~~~ll~~   93 (154)
                      .+..+++-++.+++++.++++.|++++|+++|+|+|+++|++++|++       |||++|||+|++||.|+|++++++++
T Consensus         3 ~~~~~~~vl~~~vt~l~~~~~~~ls~~Vg~aR~k~~v~~p~~~g~~~-------f~ra~RaH~N~~E~~p~~L~~l~~~~   75 (139)
T d2q7ra1           3 QETVGNVVLLAIVTLISVVQNGFFAHKVEHESRTQNGRSFQRTGTLA-------FERVYTANQNCVDAYPTFLAVLWSAG   75 (139)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCCSCCCHH-------HHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred             HHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCHH-------HHHHHHHHhhhHhhHHHHHHHHHHHH
Confidence            55667888889999999999999999999999999999999888775       99999999999999999999999999


Q ss_pred             hh-hHHHHHHHHHHHHHHHHHHhHhhccCCCCCchhhhHHHHHHHHHHHHHHHHHHH
Q 045836           94 LK-HPCVCAVLGSLFTVTRFFYFKGYATGDPQKRLTIGKYGFLALLGLMVCTISFGI  149 (154)
Q Consensus        94 l~-~p~~~~~~g~~~~~gRi~y~~gY~~g~p~~R~~gg~~~~~~~l~l~~~~~~~~~  149 (154)
                      +. +|.+++.+|.+|++||+.|+.|| +++|++|..|..++..+.+.++++++...+
T Consensus        76 l~~~~~~a~~~G~~~~vgR~~ha~Gy-~~~~~kR~~g~~~~~~~~~~L~~~a~~gi~  131 (139)
T d2q7ra1          76 LLCSQVPAAFAGLMYLFVRQKYFVGY-LGERTQSTPGYIFGKRIILFLFLMSVAGIF  131 (139)
T ss_dssp             HHSCHHHHHHHHHHHHHHHHHHHHHT-CCSSSCCCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred             hccCHHHHHHHHHHHHHHHHHHHHHH-hCCcccCcCCchHHHHHHHHHHHHHHHHHH
Confidence            98 68899999999999999999999 467999988445667777777777766544



>d2uuia1 f.56.1.1 (A:2-147) Leukotriene C4 synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure