Citrus Sinensis ID: 045900

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-----
Protein Sequence
MRNLGSSNGSGLSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRMKKLEELSKSIESIQ
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHcc
Coil and Loop (DISEMBL)
mrnlgssngsglstdeiEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANrelkplgqSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRMKKLEELSKSIESIQ
Flexible Loop (DISEMBL)
mrnlgssngsglstdeiedEEMARMAIATFQAReeeierkktevkervelqlgraeeesrrLAQIWeelevltdpmrkEVAVVRKKIdmanrelkplgqsiqkKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRMKKLEELsksiesiq
Low Complexity Region (SEG)
MRnlgssngsglsTDEIEDEEMARMAIATFQAreeeierkktevkerveLQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRMKKLEELSKSIESIQ
Disordered region (IsUnstruct)
*************************************************************LAQIWEELEVLTDPMRKEVAVVRK**********************************************************************
Disordered Region (DISOPRED)
*****************************************************************WEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELL**************SKSI****
Disordered Region (DISEMBL)
*************TDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRMKKLEE*********
Disordered Region (DISPRO)
***************************ATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRMKKLEELSKSI****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MRNLGSSNGSGLSTDEIEDEEMARMAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSxxxxxxxxxxxxxxxxxxxxxKAQLVTALMELLTESERVRMKKLEELSKSIESIQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	155
359806577	172	uncharacterized protein LOC100794044 [Gl	0.993	0.895	0.754	2e-58
255564090	153	conserved hypothetical protein [Ricinus	0.974	0.986	0.769	7e-57
356576307	169	PREDICTED: uncharacterized protein LOC10	0.980	0.899	0.733	3e-56
225436319	172	PREDICTED: uncharacterized protein LOC10	0.987	0.889	0.713	1e-53
296090417	193	unnamed protein product [Vitis vinifera]	0.851	0.683	0.787	2e-52
225449696	281	PREDICTED: uncharacterized protein LOC10	0.851	0.469	0.787	2e-52
147807643	366	hypothetical protein VITISV_034536 [Viti	0.851	0.360	0.787	4e-52
224110220	155	predicted protein [Populus trichocarpa]	0.980	0.980	0.732	3e-51
255637447	164	unknown [Glycine max]	0.980	0.926	0.685	3e-50
351723393	164	uncharacterized protein LOC100499923 [Gl	0.980	0.926	0.685	7e-50

>gi|359806577|ref|NP_001241267.1| uncharacterized protein LOC100794044 [Glycine max] gi|255647871|gb|ACU24394.1| unknown [Glycine max]

 Score =  229 bits (585), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 117/155 (75%), Positives = 140/155 (90%), Gaps = 1/155 (0%)

Query: 1   MRNLGSSNGSG-LSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEES 59
           M+NLGS   SG LS +E EDEE++++AI+TFQ++EEEIERKKTEV+E+VELQLGRAEEE+
Sbjct: 14  MKNLGSIGSSGRLSAEEYEDEEISKLAISTFQSKEEEIERKKTEVREKVELQLGRAEEET 73

Query: 60  RRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKS 119
           RRLA IWEELEVL DPMRKEVA+VRKKID+AN++LKPLG + QKKE+EYKEALEAFNEK+
Sbjct: 74  RRLAHIWEELEVLDDPMRKEVAMVRKKIDLANKDLKPLGLNFQKKEKEYKEALEAFNEKN 133

Query: 120 KEKAQLVTALMELLTESERVRMKKLEELSKSIESI 154
           KEKA LV  L+E+LTESER+RMKKLEEL K IES+
Sbjct: 134 KEKAHLVATLVEMLTESERLRMKKLEELCKIIESM 168

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564090|ref|XP_002523043.1| conserved hypothetical protein [Ricinus communis] gi|223537726|gb|EEF39347.1| conserved hypothetical protein [Ricinus communis]

 Score =  224 bits (572), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 117/152 (76%), Positives = 137/152 (90%), Gaps = 1/152 (0%)

Query: 1   MRNLGS-SNGSGLSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEES 59
           MRN+GS  +G  LS +E E++E++R  I++FQAREEEIERKK EV+E+VELQLGRAEEE+
Sbjct: 1   MRNMGSMGSGGKLSMEENEEDEISRFDISSFQAREEEIERKKMEVREKVELQLGRAEEET 60

Query: 60  RRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKS 119
           +RL QIWEELE L DP RKEVA+VRKKID+ANRELKPLGQS QKKE+EYKEALEA+NEK+
Sbjct: 61  KRLTQIWEELESLADPTRKEVAMVRKKIDVANRELKPLGQSCQKKEKEYKEALEAYNEKN 120

Query: 120 KEKAQLVTALMELLTESERVRMKKLEELSKSI 151
           KEKAQLVT LMELLTESER+RMKKLEELSK+I
Sbjct: 121 KEKAQLVTTLMELLTESERLRMKKLEELSKNI 152

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576307|ref|XP_003556274.1| PREDICTED: uncharacterized protein LOC100793572 [Glycine max]

 Score =  223 bits (567), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 113/154 (73%), Positives = 137/154 (88%), Gaps = 2/154 (1%)

Query: 1   MRNLGSSNGSGLSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESR 60
           M+NLGSS    LS +E EDEE++++ I+TFQ++EEEIERKK EV+E+VE QLGRAEEE+R
Sbjct: 14  MKNLGSS--GRLSAEEYEDEEISKLTISTFQSKEEEIERKKMEVREKVEFQLGRAEEETR 71

Query: 61  RLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSK 120
           RLA IWEELEVL DPMRKEVA+VRKKID+AN++LKPLG + QKKE+EYKEALEAFNEK+K
Sbjct: 72  RLAHIWEELEVLDDPMRKEVAMVRKKIDLANKDLKPLGLNFQKKEKEYKEALEAFNEKNK 131

Query: 121 EKAQLVTALMELLTESERVRMKKLEELSKSIESI 154
           EKA LV  L+E+LTESER+RMKKLEEL K+IES+
Sbjct: 132 EKAHLVATLVEMLTESERLRMKKLEELCKTIESM 165

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436319|ref|XP_002267642.1| PREDICTED: uncharacterized protein LOC100243168 [Vitis vinifera] gi|297734837|emb|CBI17071.3| unnamed protein product [Vitis vinifera]

 Score =  214 bits (544), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/157 (71%), Positives = 137/157 (87%), Gaps = 4/157 (2%)

Query: 1   MRNLG--SSNGSGLSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEE 58
           ++N G  S NGS L+ D+  DEEM+R A++ F+A+EEEIERKK EV+ERV+ QLGR EEE
Sbjct: 18  VKNSGVISYNGSPLTDDK--DEEMSRSALSAFRAKEEEIERKKMEVRERVQAQLGRVEEE 75

Query: 59  SRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEK 118
           ++RLA+I EELE L+DPMRKEVA++RK+ID  NREL+PLGQ  QKKE+EYKEALEAFNEK
Sbjct: 76  TKRLAEIREELEALSDPMRKEVAIIRKRIDAVNRELRPLGQGCQKKEKEYKEALEAFNEK 135

Query: 119 SKEKAQLVTALMELLTESERVRMKKLEELSKSIESIQ 155
           +KEKAQLVT LMEL++ESER+RMKKLEELSK+IESIQ
Sbjct: 136 NKEKAQLVTKLMELVSESERLRMKKLEELSKNIESIQ 172

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296090417|emb|CBI40236.3| unnamed protein product [Vitis vinifera]

 Score =  210 bits (534), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 104/132 (78%), Positives = 123/132 (93%)

Query: 22  MARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVA 81
           + R AI+T Q+REEEIERKK EV+++VELQL RAEEE+RRLAQIWEELEVL DP+RKEVA
Sbjct: 60  VTRSAISTLQSREEEIERKKMEVRQKVELQLSRAEEETRRLAQIWEELEVLADPLRKEVA 119

Query: 82  VVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRM 141
           VVRKKIDMANR++KPLGQS QKKE+EYKEALEAFNEK++EKAQLVT LMELL+ESE++RM
Sbjct: 120 VVRKKIDMANRDIKPLGQSCQKKEKEYKEALEAFNEKNREKAQLVTTLMELLSESEKLRM 179

Query: 142 KKLEELSKSIES 153
           KKLE+LSK ++S
Sbjct: 180 KKLEDLSKHVDS 191

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225449696|ref|XP_002265278.1| PREDICTED: uncharacterized protein LOC100262498 [Vitis vinifera]

 Score =  209 bits (533), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 104/132 (78%), Positives = 123/132 (93%)

Query: 22  MARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVA 81
           + R AI+T Q+REEEIERKK EV+++VELQL RAEEE+RRLAQIWEELEVL DP+RKEVA
Sbjct: 148 VTRSAISTLQSREEEIERKKMEVRQKVELQLSRAEEETRRLAQIWEELEVLADPLRKEVA 207

Query: 82  VVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRM 141
           VVRKKIDMANR++KPLGQS QKKE+EYKEALEAFNEK++EKAQLVT LMELL+ESE++RM
Sbjct: 208 VVRKKIDMANRDIKPLGQSCQKKEKEYKEALEAFNEKNREKAQLVTTLMELLSESEKLRM 267

Query: 142 KKLEELSKSIES 153
           KKLE+LSK ++S
Sbjct: 268 KKLEDLSKHVDS 279

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147807643|emb|CAN75481.1| hypothetical protein VITISV_034536 [Vitis vinifera]

 Score =  209 bits (531), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 104/132 (78%), Positives = 123/132 (93%)

Query: 22  MARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVA 81
           + R AI+T Q+REEEIERKK EV+++VELQL RAEEE+RRLAQIWEELEVL DP+RKEVA
Sbjct: 233 VTRSAISTLQSREEEIERKKMEVRQKVELQLSRAEEETRRLAQIWEELEVLADPLRKEVA 292

Query: 82  VVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRM 141
           VVRKKIDMANR++KPLGQS QKKE+EYKEALEAFNEK++EKAQLVT LMELL+ESE++RM
Sbjct: 293 VVRKKIDMANRDIKPLGQSCQKKEKEYKEALEAFNEKNREKAQLVTTLMELLSESEKLRM 352

Query: 142 KKLEELSKSIES 153
           KKLE+LSK ++S
Sbjct: 353 KKLEDLSKHVDS 364

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110220|ref|XP_002315451.1| predicted protein [Populus trichocarpa] gi|222864491|gb|EEF01622.1| predicted protein [Populus trichocarpa]

 Score =  206 bits (523), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/153 (73%), Positives = 133/153 (86%), Gaps = 1/153 (0%)

Query: 3   NLGSSNGSGLSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRL 62
           N+GSS G   + +  E+EE+ R+ I+ FQAREEEIERKK EV+E+VELQLGRAEEE+RRL
Sbjct: 4   NIGSS-GRLSTEEINEEEEIPRLDISKFQAREEEIERKKMEVREKVELQLGRAEEETRRL 62

Query: 63  AQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEK 122
             IWEELEVL DP+RK+VA+ RKKIDMAN+ELKPLGQS QKKE+EYKEALEAFNEK++EK
Sbjct: 63  THIWEELEVLADPLRKDVAIARKKIDMANKELKPLGQSCQKKEKEYKEALEAFNEKNREK 122

Query: 123 AQLVTALMELLTESERVRMKKLEELSKSIESIQ 155
           AQLV  LMELLTESE+ RMKKLEEL+K +ESI+
Sbjct: 123 AQLVATLMELLTESEKQRMKKLEELNKIMESIR 155

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255637447|gb|ACU19051.1| unknown [Glycine max]

 Score =  202 bits (515), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 107/156 (68%), Positives = 134/156 (85%), Gaps = 4/156 (2%)

Query: 1   MRNLGS-SNGSGLSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEES 59
           ++N GS S  S LS    EDEE++R A++TF+A+EEEIERKK EV+E+V+LQLGR EEE+
Sbjct: 12  VQNSGSLSFSSHLSK---EDEEISRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEET 68

Query: 60  RRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKS 119
           +RLA I EELE L DPMRKEVA+VRK+ID  N+ELKPLG + QKKE+EYK+ALEAFNEK+
Sbjct: 69  KRLATIREELEALADPMRKEVALVRKRIDSVNKELKPLGHTCQKKEKEYKDALEAFNEKN 128

Query: 120 KEKAQLVTALMELLTESERVRMKKLEELSKSIESIQ 155
           +EK QL+T LMEL++ESER+RMKKLEELSK+I+SIQ
Sbjct: 129 REKVQLITKLMELVSESERLRMKKLEELSKNIDSIQ 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351723393|ref|NP_001238045.1| uncharacterized protein LOC100499923 [Glycine max] gi|255627713|gb|ACU14201.1| unknown [Glycine max]

 Score =  201 bits (512), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 107/156 (68%), Positives = 133/156 (85%), Gaps = 4/156 (2%)

Query: 1   MRNLGS-SNGSGLSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEES 59
           ++N GS S  S LS    EDEEM+R A++TF+A+EEEIERKK EV+E+V+LQLGR EEE+
Sbjct: 12  VQNSGSLSFSSHLSK---EDEEMSRSALSTFRAKEEEIERKKMEVREKVQLQLGRVEEET 68

Query: 60  RRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKS 119
           +RLA I EELE L DPMRKEVA+VRK+ID  N+ELKPLG + QKKE+EYK+ALEAFNEK+
Sbjct: 69  KRLATIREELEALADPMRKEVALVRKRIDSVNKELKPLGHTCQKKEKEYKDALEAFNEKN 128

Query: 120 KEKAQLVTALMELLTESERVRMKKLEELSKSIESIQ 155
           +EK QL+T LMEL+ ESER+RMKKLEELSK+I+S+Q
Sbjct: 129 REKVQLITKLMELVGESERLRMKKLEELSKNIDSMQ 164

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	155
TAIR|locus:2100083	178	AT3G09980 "AT3G09980" [Arabido	0.883	0.769	0.642	6.8e-40
TAIR|locus:2044883	195	AT2G36410 [Arabidopsis thalian	0.883	0.702	0.585	2.1e-36
TAIR|locus:2085231	180	AT3G52920 [Arabidopsis thalian	0.877	0.755	0.589	2.7e-36
TAIR|locus:2041985	174	AT2G27740 "AT2G27740" [Arabido	0.883	0.787	0.586	9.2e-36
TAIR|locus:2085206	164	AT3G52900 "AT3G52900" [Arabido	0.909	0.859	0.546	1.3e-34
TAIR|locus:2144618	173	AT5G03660 "AT5G03660" [Arabido	0.870	0.780	0.562	7.4e-34
TAIR|locus:1009023152	155	AT2G36355 "AT2G36355" [Arabido	0.883	0.883	0.553	1.6e-31
RGD|1564990	368	Gorab "golgin, RAB6-interactin	0.638	0.269	0.282	9.1e-08
UNIPROTKB|F1PWN8	396	GORAB "Uncharacterized protein	0.638	0.25	0.292	1e-07
UNIPROTKB|A5PKK7	370	GORAB "RAB6-interacting golgin	0.638	0.267	0.282	1.2e-07

TAIR|locus:2100083 AT3G09980 "AT3G09980" [Arabidopsis thaliana (taxid:3702)]

 Score = 425 (154.7 bits), Expect = 6.8e-40, P = 6.8e-40
 Identities = 88/137 (64%), Positives = 106/137 (77%)

Query:    18 EDEEMARMAIATFQAXXXXXXXXXXXXXXXXXLQLGRAEEESRRLAQIWEELEVLTDPMR 77
             EDEEM+R A++ F+A                  QLGR EEE++RLA I EELE L DPMR
Sbjct:    41 EDEEMSRTALSAFRAKEEEIEKKKMEIRERVQAQLGRVEEETKRLALIREELEGLADPMR 100

Query:    78 KEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESE 137
             KEVA+VRKKID  N+ELKPLG ++QKKEREYKEALEAFNEK++EK QL+T LMEL+ ESE
Sbjct:   101 KEVAMVRKKIDSVNKELKPLGHTVQKKEREYKEALEAFNEKNREKVQLITRLMELVGESE 160

Query:   138 RVRMKKLEELSKSIESI 154
             ++RMKKLEELSK+I+SI
Sbjct:   161 KMRMKKLEELSKNIDSI 177

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2044883 AT2G36410 [Arabidopsis thaliana (taxid:3702)]

 Score = 392 (143.0 bits), Expect = 2.1e-36, P = 2.1e-36
 Identities = 82/140 (58%), Positives = 103/140 (73%)

Query:    18 EDEEMARMAIATFQAXXXXXXXXXXXXXXXXXLQLGRAEEESRRLAQIWEELEVLTDPMR 77
             EDEEM R A++ F+A                  QLGR E+E++RL+ I EELE + DPMR
Sbjct:    56 EDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLSTIREELESMADPMR 115

Query:    78 KEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALME---LLT 134
             KEV+VVRKKID  N+ELKPLG ++QKKEREYKEAL+ FNEK++EK QL+T LME   L+ 
Sbjct:   116 KEVSVVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMEMEQLVG 175

Query:   135 ESERVRMKKLEELSKSIESI 154
             ESE++RM KLEELSKSIE++
Sbjct:   176 ESEKLRMIKLEELSKSIETV 195

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2085231 AT3G52920 [Arabidopsis thaliana (taxid:3702)]

 Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
 Identities = 82/139 (58%), Positives = 102/139 (73%)

Query:    18 EDEEMARMAIATFQAXXXXXXXXXXXXXXXXXLQLGRAEEESRRLAQIWEELEVLTDPMR 77
             EDEEMAR A++ F+A                  QLGR EEE+RRLA I EELE + DPMR
Sbjct:    27 EDEEMARSALSAFRAKEDEIEKRKMEVRERVKAQLGRVEEETRRLASIREELETMADPMR 86

Query:    78 KEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALME---LLT 134
             KEV  VRKKID  N+ELKPLG ++QKKEREYKEAL+ FNEK++EK QL+T LME   L+ 
Sbjct:    87 KEVNWVRKKIDSVNKELKPLGSTVQKKEREYKEALDTFNEKNREKVQLITKLMEMGQLVG 146

Query:   135 ESERVRMKKLEELSKSIES 153
             ESE++R+KKL+ELS+SI++
Sbjct:   147 ESEKLRLKKLDELSRSIDT 165

GO:0005634 "nucleus" evidence=ISM

GO:0009507 "chloroplast" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2041985 AT2G27740 "AT2G27740" [Arabidopsis thaliana (taxid:3702)]

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 81/138 (58%), Positives = 104/138 (75%)

Query:    15 DEIEDEEMARMAIATFQAXXXXXXXXXXXXXXXXXLQLGRAEEESRRLAQIWEELEVLTD 74
             DE ++EE+++ A A F+A                  +LG AEE +RRLA+I EELE LTD
Sbjct:    34 DE-KEEELSQSAFALFKAKEDEIERRKMEVKDRVQKKLGLAEEATRRLAEIREELEALTD 92

Query:    75 PMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLT 134
             PMRKE++ +RK++D  NRELKPLGQS Q+KERE+KEALEA+NEK+KEKA  V+ L+EL+T
Sbjct:    93 PMRKEISAIRKRVDAINRELKPLGQSCQRKEREFKEALEAYNEKNKEKAIFVSKLVELVT 152

Query:   135 ESERVRMKKLEELSKSIE 152
             ESE++RM KLEELSKSIE
Sbjct:   153 ESEKLRMTKLEELSKSIE 170

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2085206 AT3G52900 "AT3G52900" [Arabidopsis thaliana (taxid:3702)]

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 77/141 (54%), Positives = 103/141 (73%)

Query:    15 DEIEDEEMARMAIATFQAXXXXXXXXXXXXXXXXXLQLGRAEEESRRLAQIWEELEVLTD 74
             ++ E+EE+ ++A+  FQA                  +LG AEE +R L Q  EELE++ D
Sbjct:    24 EDNEEEEIWKVAVTRFQAREEEIERKKMTVKEKVQQRLGFAEEATRCLTQTLEELEIMGD 83

Query:    75 PMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLT 134
             PMRKEV +VRKKIDMANR++K L QS QKKE+EYK+ LEAFNEK+KEKA LV+ LMELL 
Sbjct:    84 PMRKEVGMVRKKIDMANRDIKSLAQSCQKKEKEYKDTLEAFNEKNKEKAHLVSMLMELLA 143

Query:   135 ESERVRMKKLEELSKSIESIQ 155
             ESER+R+KKLEE++K++ ++Q
Sbjct:   144 ESERLRIKKLEEINKTVGTLQ 164

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2144618 AT5G03660 "AT5G03660" [Arabidopsis thaliana (taxid:3702)]

 Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
 Identities = 76/135 (56%), Positives = 96/135 (71%)

Query:    18 EDEEMARMAIATFQAXXXXXXXXXXXXXXXXXLQLGRAEEESRRLAQIWEELEVLTDPMR 77
             ED+E++  A++ F+A                  QLGR E+ES+RLA I EELE   DPMR
Sbjct:    35 EDDELSMKALSAFKAKEEEIEKKKMEIRERVQAQLGRVEDESKRLAMIREELEGFADPMR 94

Query:    78 KEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESE 137
             KEV +VRKKID  ++ELKPLG ++QKKE EYK+ALEAFNEK+KEK +L+T L EL  ESE
Sbjct:    95 KEVTMVRKKIDSLDKELKPLGNTVQKKETEYKDALEAFNEKNKEKVELITKLQELEGESE 154

Query:   138 RVRMKKLEELSKSIE 152
             + R KKLEELSK+I+
Sbjct:   155 KFRFKKLEELSKNID 169

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:1009023152 AT2G36355 "AT2G36355" [Arabidopsis thaliana (taxid:3702)]

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 78/141 (55%), Positives = 98/141 (69%)

Query:    15 DEIEDEEMARMAIATFQAXXXXXXXXXXXXXXXXXLQLGRAEEESRRLAQIWEELEVLTD 74
             +E ++EE+ R     FQA                  +LG AEE +R L Q  E LE++ D
Sbjct:    19 EENQEEEIWR----NFQAREEEIERKKMAVKDKIQQRLGFAEEATRSLTQTLEGLEIMGD 74

Query:    75 PMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLT 134
             PMRKEV +VRKKI+MANRE+K L QS QKKEREYKE  EAF+EK+KEKA LV+ LMELL 
Sbjct:    75 PMRKEVGMVRKKIEMANREIKSLSQSCQKKEREYKEIHEAFDEKNKEKAHLVSILMELLA 134

Query:   135 ESERVRMKKLEELSKSIESIQ 155
             ESERVR+KKLEE++K+I S++
Sbjct:   135 ESERVRVKKLEEINKTIGSLR 155

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

RGD|1564990 Gorab "golgin, RAB6-interacting" [Rattus norvegicus (taxid:10116)]

 Score = 129 (50.5 bits), Expect = 9.1e-08, P = 9.1e-08
 Identities = 28/99 (28%), Positives = 54/99 (54%)

Query:    54 RAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALE 113
             R + E+ +L +I +EL+ L D +  ++ ++R +ID A+ E     +   + E EY  A  
Sbjct:   177 RTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQASLEYSYARKRFDRAEAEYVTAKL 236

Query:   114 AFNEKSKEKAQLVTALMELLTESERVRMKKLEELSKSIE 152
                 K++ K QL   L  ++ ++E  + +KLEEL + ++
Sbjct:   237 DLQRKTETKEQLTEHLCTIIQQNELRKAQKLEELMRQLD 275

GO:0005634 "nucleus" evidence=ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

UNIPROTKB|F1PWN8 GORAB "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 129 (50.5 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 29/99 (29%), Positives = 54/99 (54%)

Query:    54 RAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALE 113
             R + E+ +L +I +EL+ L D +  ++ ++R +ID A+ E     +  ++ E EY  A  
Sbjct:   201 RTQAEALKLKRIQKELQALDDMVSADIGILRNRIDQASLEYSYARKRFERAEAEYVTAKL 260

Query:   114 AFNEKSKEKAQLVTALMELLTESERVRMKKLEELSKSIE 152
                 K++ K QL   L  ++ ++E  + KKLEEL   ++
Sbjct:   261 DLQRKTEIKEQLTEHLCTIIQQNELRKAKKLEELMHQLD 299

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

UNIPROTKB|A5PKK7 GORAB "RAB6-interacting golgin" [Bos taurus (taxid:9913)]

 Score = 128 (50.1 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 28/99 (28%), Positives = 54/99 (54%)

Query:    54 RAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALE 113
             R + E+ +L +I +EL+ L D +  ++ ++R +ID A+ +     +   + E EY  A  
Sbjct:   174 RTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQASLDYSYARKRFDRAEAEYVTAKL 233

Query:   114 AFNEKSKEKAQLVTALMELLTESERVRMKKLEELSKSIE 152
                 K++ K QL   L  ++ ++E  + KKLEEL + ++
Sbjct:   234 ELQRKTELKEQLTEHLCTIIQQNELRKAKKLEELMQQLD 272

GO:0005794 "Golgi apparatus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	155
pfam04949	160	pfam04949, Transcrip_act, Transcriptional activato	2e-48

>gnl|CDD|191136 pfam04949, Transcrip_act, Transcriptional activator

 Score =  153 bits (387), Expect = 2e-48
 Identities = 101/150 (67%), Positives = 129/150 (86%)

Query: 5   GSSNGSGLSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQ 64
           GS +  G    + +DEE++R A++ F+A+EEEIER+K EV+ERV+ QLGR EEE++RLA+
Sbjct: 11  GSISFGGSPMMDEKDEELSRSALSLFKAKEEEIERRKMEVRERVQAQLGRVEEETKRLAE 70

Query: 65  IWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQ 124
           I EELE + DPMRKEV+++RK+ID  NRELKPLGQ+ QKKE+EYKEALEA+NEK+KEKAQ
Sbjct: 71  IREELEGMADPMRKEVSMIRKRIDSVNRELKPLGQTCQKKEKEYKEALEAYNEKNKEKAQ 130

Query: 125 LVTALMELLTESERVRMKKLEELSKSIESI 154
           LVT LMEL+ ESE++RMKKLEELSKSIES+
Sbjct: 131 LVTKLMELVGESEKLRMKKLEELSKSIESL 160

This family of proteins may act as a transcriptional activator. It plays a role in stress response in plants. Length = 160

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	155
PF04949	159	Transcrip_act: Transcriptional activator; InterPro	100.0
TIGR01837	118	PHA_granule_1 poly(hydroxyalkanoate) granule-assoc	94.93
PF05597	132	Phasin: Poly(hydroxyalcanoate) granule associated	94.52
TIGR02169	1164	SMC_prok_A chromosome segregation protein SMC, pri	92.8
PF10805	106	DUF2730: Protein of unknown function (DUF2730); In	88.33
PF07200	150	Mod_r: Modifier of rudimentary (Mod(r)) protein; I	86.95
TIGR03185	650	DNA_S_dndD DNA sulfur modification protein DndD. T	83.92
PF08317	325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	82.25
TIGR00606	1311	rad50 rad50. This family is based on the phylogeno	80.65

>PF04949 Transcrip_act: Transcriptional activator; InterPro: IPR007033 Golgins are a family of coiled-coil proteins associated with the Golgi apparatus necessary for tethering events in membrane fusion and as structural supports for Golgi cisternae []

Probab=100.00  E-value=4.9e-75  Score=461.07  Aligned_cols=150  Identities=73%  Similarity=0.965  Sum_probs=143.8

Q ss_pred             CCCCCCCCCCCchhhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhHHHhHHHHHHHHHHhhccchhHHHHHHH
Q 045900            4 LGSSNGSGLSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVV   83 (155)
Q Consensus         4 l~~~~~~~~~~~~~~~ee~srsals~F~akEeEIErkKmeVrekV~aqLGrvEeetkrLa~ireELE~l~DP~RKEV~~v   83 (155)
                      .|..+.+++++.++++++|||||+|+|+|+|++|||+||+||+|||+|||||||+|||||+||+|||+|+|||||||++|
T Consensus        10 ~~~~~~~g~~~~~~~~e~~s~sals~f~AkEeeIErkKmeVrekVq~~LgrveEetkrLa~ireeLE~l~dP~RkEv~~v   89 (159)
T PF04949_consen   10 SGSISFNGSSMMDDEDEEMSRSALSAFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLAEIREELEVLADPMRKEVEMV   89 (159)
T ss_pred             CCCCCCCCCcccchhHHHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhccchHHHHHHH
Confidence            34444555777788899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhcccchhhhHHHhHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhh
Q 045900           84 RKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRMKKLEELSKSIES  153 (155)
Q Consensus        84 RKkID~vnreLKpLg~scqKKEkEYKeaLEafNEKnkEKa~LV~~LmELv~ESErlRmkKLEELsk~ies  153 (155)
                      |||||+|||+|||||++|||||+|||+||+||||||+||++||++||+||+||||+|||||||||++|++
T Consensus        90 RkkID~vNreLkpl~~~cqKKEkEykealea~nEknkeK~~Lv~~L~eLv~eSE~~rmKKLEELsk~ies  159 (159)
T PF04949_consen   90 RKKIDSVNRELKPLGQSCQKKEKEYKEALEAFNEKNKEKAQLVTRLMELVSESERLRMKKLEELSKEIES  159 (159)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999986

This entry represents proteins annotated as RAB6-interacting golgins.

>TIGR01837 PHA_granule_1 poly(hydroxyalkanoate) granule-associated protein

Probab=94.93  E-value=0.11  Score=38.90  Aligned_cols=62  Identities=19%  Similarity=0.336  Sum_probs=46.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHhHHHHHHHHHHhhccchhHHHHHHHHHHHHhhhhcccchh
Q 045900           35 EEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLG   98 (155)
Q Consensus        35 eEIErkKmeVrekV~aqLGrvEeetkrLa~ireELE~l~DP~RKEV~~vRKkID~vnreLKpLg   98 (155)
                      +++...--+|+++.+.+.+.+|.-..+  .+..=|..|+-|++.||..++.|||.+...|..|.
T Consensus        55 e~~~~~~~~~~~~~~~~~~~le~~~~~--~v~~~L~~lg~~tk~ev~~L~~RI~~Le~~l~~l~  116 (118)
T TIGR01837        55 EEVKTALEQTRDQVQRNWDKLEKAFDE--RVEQALNRLNIPSREEIEALSAKIEQLAVQVEELR  116 (118)
T ss_pred             HHHhhhHHHHHHHHHhhHHHHHHHHHH--HHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            444444455666666666666665543  56777899999999999999999999999887764

This model describes a domain found in some proteins associated with polyhydroxyalkanoate (PHA) granules in a subset of species that have PHA inclusion granules. Included are two tandem proteins of Pseudomonas oleovorans, PhaI and PhaF, and their homologs in related species. PhaF proteins have a low-complexity C-terminal region with repeats similar to AAAKP.

>PF05597 Phasin: Poly(hydroxyalcanoate) granule associated protein (phasin); InterPro: IPR008769 Polyhydroxyalkanoates (PHAs) are storage polyesters synthesised by various bacteria as intracellular carbon and energy reserve material

Probab=94.52  E-value=0.2  Score=38.87  Aligned_cols=62  Identities=24%  Similarity=0.389  Sum_probs=44.7

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHhHHHHHHHHHHhhccchhHHHHHHHHHHHHhhhhcccchh
Q 045900           35 EEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLG   98 (155)
Q Consensus        35 eEIErkKmeVrekV~aqLGrvEeetkrLa~ireELE~l~DP~RKEV~~vRKkID~vnreLKpLg   98 (155)
                      +.+...--.|++++..+++++|.--..  .+..-|..|+=|+|+||..+..|||.++++|.-|.
T Consensus        68 ~~~~~~~~~~~~~~~~~~dklE~~fd~--rV~~aL~rLgvPs~~dv~~L~~rId~L~~~v~~l~  129 (132)
T PF05597_consen   68 DQVKSRVDDVKERATGQWDKLEQAFDE--RVARALNRLGVPSRKDVEALSARIDQLTAQVERLA  129 (132)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            333444466667777777777654321  13345888999999999999999999999886553

PHAs are accumulated as water-insoluble inclusions within the cells. This family consists of the phasins PhaF and PhaI which act as a transcriptional regulator of PHA biosynthesis genes. PhaF has been proposed to repress expression of the phaC1 gene and the phaIF operon.

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type

Probab=92.80  E-value=7  Score=36.08  Aligned_cols=72  Identities=21%  Similarity=0.290  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHhhhhcccchhhhHHHhHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Q 045900           79 EVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRMKKLEELSKS  150 (155)
Q Consensus        79 EV~~vRKkID~vnreLKpLg~scqKKEkEYKeaLEafNEKnkEKa~LV~~LmELv~ESErlRmkKLEELsk~  150 (155)
                      ..+.++++|+.++++|+-+|....+-..+|.++.+-|+.-.+...+|.+..-.|-.-=++++-++.+.+..+
T Consensus       952 ~~~~l~~~l~~l~~~i~~l~~vN~~Ai~~~~~~~~~~~~l~~q~~dl~~~~~~l~~~i~~l~~~~~~~f~~~ 1023 (1164)
T TIGR02169       952 SLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEA 1023 (1164)
T ss_pred             CHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            356889999999999999999888889999999999999999999998887777766666666664444433

SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.

>PF10805 DUF2730: Protein of unknown function (DUF2730); InterPro: IPR020269 This entry represents a family of various hypothetical proteins

Probab=88.33  E-value=1.8  Score=31.70  Aligned_cols=55  Identities=31%  Similarity=0.431  Sum_probs=40.9

Q ss_pred             HHHHHHHhhhhHHHhHHHHHHHHHHhhccchhHHHHHHHHHHHHhhhhcccchhhhH
Q 045900           45 KERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSI  101 (155)
Q Consensus        45 rekV~aqLGrvEeetkrLa~ireELE~l~DP~RKEV~~vRKkID~vnreLKpLg~sc  101 (155)
                      ++.+.+--.++..-.+||+.+-.+++.|  |++.+|..++..|..++.+++-++.+-
T Consensus        34 ~~~~~~l~~~~~~~~~Rl~~lE~~l~~L--Pt~~dv~~L~l~l~el~G~~~~l~~~l   88 (106)
T PF10805_consen   34 REDIEKLEERLDEHDRRLQALETKLEHL--PTRDDVHDLQLELAELRGELKELSARL   88 (106)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhC--CCHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence            3444444455566688999999999988  889999888888888887777665443

The proteins, which include HI1498 and Gp25, from phage Mu, are currently uncharacterised.

>PF07200 Mod_r: Modifier of rudimentary (Mod(r)) protein; InterPro: IPR009851 This entry represents a conserved region approximately 150 residues long within a number of eukaryotic proteins that show homology with Drosophila melanogaster Modifier of rudimentary (Mod(r)) proteins

Probab=86.95  E-value=9.8  Score=28.20  Aligned_cols=62  Identities=27%  Similarity=0.309  Sum_probs=45.6

Q ss_pred             HHHHHHHHHHHHhhhhcccchhhhHHHhHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhHHHHH
Q 045900           77 RKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERV  139 (155)
Q Consensus        77 RKEV~~vRKkID~vnreLKpLg~scqKKEkEYKeaLEafNEKnkEKa~LV~~LmELv~ESErl  139 (155)
                      ..++...|-.|-..-.+++.|...|+.|+..|..+...||.-. -++.|-...-+.=.+||.+
T Consensus        54 ~~~l~~~r~~l~~~~~~~~~L~~~~~~k~~~~~~l~~~~s~~~-l~~~L~~~~~e~eeeSe~l  115 (150)
T PF07200_consen   54 EPELEELRSQLQELYEELKELESEYQEKEQQQDELSSNYSPDA-LLARLQAAASEAEEESEEL  115 (150)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCHHH-HHHHHHHHHHHHHHHHHHH
Confidence            4567778888888888999999999999999999999999764 3344444444444444444

The N-terminal half of Mod(r) proteins is acidic, whereas the C-terminal half is basic [], and both of these regions are represented in this family.; PDB: 2CAZ_F 2P22_C 2F66_F.

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD

Probab=83.92  E-value=35  Score=31.34  Aligned_cols=32  Identities=22%  Similarity=0.347  Sum_probs=16.8

Q ss_pred             HHHHHHHHHHHHhhH-HHHHHHHHHHHHHhhhh
Q 045900          121 EKAQLVTALMELLTE-SERVRMKKLEELSKSIE  152 (155)
Q Consensus       121 EKa~LV~~LmELv~E-SErlRmkKLEELsk~ie  152 (155)
                      .......++.+++.+ .+.++-.+...|++.+.
T Consensus       480 ~~~~~~~~~~~~l~~~~~~l~~~~~~~le~~~~  512 (650)
T TIGR03185       480 RAITIADKAKKTLKEFREKLLERKLQQLEEEIT  512 (650)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334444455554443 34566666666666554

This model describes the DndB protein encoded by an operon associated with a sulfur-containing modification to DNA. The operon is sporadically distributed in bacteria, much like some restriction enzyme operons. DndD is described as a putative ATPase. The small number of examples known so far include species from among the Firmicutes, Actinomycetes, Proteobacteria, and Cyanobacteria.

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []

Probab=82.25  E-value=30  Score=29.35  Aligned_cols=88  Identities=20%  Similarity=0.305  Sum_probs=65.4

Q ss_pred             HHHHHHHHHhhhhHHHhHHHHHHHHHHhhccchhHHHHHHHHHHHHhhhhcccchhhhHHHhHHHHHHHHHHhhhhhHHH
Q 045900           43 EVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEK  122 (155)
Q Consensus        43 eVrekV~aqLGrvEeetkrLa~ireELE~l~DP~RKEV~~vRKkID~vnreLKpLg~scqKKEkEYKeaLEafNEKnkEK  122 (155)
                      ++..++.+....++.+..+|...-.|   +++-...++..+|..|..++-+|.-..+.-...+.+...--...++.+.+|
T Consensus       177 ~~~~~l~~~~~~L~~e~~~Lk~~~~e---~~~~D~~eL~~lr~eL~~~~~~i~~~k~~l~el~~el~~l~~~i~~~~~~k  253 (325)
T PF08317_consen  177 ELLPKLRERKAELEEELENLKQLVEE---IESCDQEELEALRQELAEQKEEIEAKKKELAELQEELEELEEKIEELEEQK  253 (325)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhh---hhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            45566666666777777776666555   555566889999999999998888888888888888777777777777778


Q ss_pred             HHHHHHHHHHh
Q 045900          123 AQLVTALMELL  133 (155)
Q Consensus       123 a~LV~~LmELv  133 (155)
                      .++...+-++=
T Consensus       254 ~~l~~eI~e~~  264 (325)
T PF08317_consen  254 QELLAEIAEAE  264 (325)
T ss_pred             HHHHHHHHHHH
Confidence            77776666543

>TIGR00606 rad50 rad50

Probab=80.65  E-value=65  Score=32.23  Aligned_cols=53  Identities=21%  Similarity=0.303  Sum_probs=36.6

Q ss_pred             HHHHHHHHHHHHhhhhcccchhhhHHHhHHHHHHHHHHhhhhhHHHHHHHHHH
Q 045900           77 RKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTAL  129 (155)
Q Consensus        77 RKEV~~vRKkID~vnreLKpLg~scqKKEkEYKeaLEafNEKnkEKa~LV~~L  129 (155)
                      ..++...+..|..+..+|-||.+.-.+...+|.+.....+.+..+...-++.+
T Consensus       894 ~~el~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  946 (1311)
T TIGR00606       894 STEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDI  946 (1311)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            46777777778888888888887777777777776666666655544444443

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	155
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-05
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	4e-05
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	1e-04
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	2e-05
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	9e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-04
1w1w_A	430	Structural maintenance of chromosome 1; cohesin, c	3e-04

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 17/140 (12%), Positives = 55/140 (39%), Gaps = 8/140 (5%)

Query: 16   EIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDP 75
            E++  ++   ++  ++     +E K  +++ +++ Q    +    ++  +       T+ 
Sbjct: 905  ELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMNNLEITYSTETEK 964

Query: 76   MRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTE 135
            +R +V  +R   +    E K     +   + E  +  +  ++   EK  +     +   E
Sbjct: 965  LRSDVERLRMSEE----EAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHE 1020

Query: 136  SERVRMKKLEELSKSIESIQ 155
            +E    + + EL +    ++
Sbjct: 1021 TE----QLVSELKEQNTLLK 1036

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 21/140 (15%), Positives = 56/140 (40%), Gaps = 4/140 (2%)

Query: 16   EIEDEEMARMAIATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDP 75
             +  +   R  +A  + ++ +IE +  E  +++ + L   E +  +L +  +E       
Sbjct: 890  IVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGL---ENKIMQLQRKIDEQNKEYKS 946

Query: 76   MRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTE 135
            + +++  +         +L+   + ++  E E K A        +E A+L   L +  TE
Sbjct: 947  LLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTE 1006

Query: 136  SERVRMKKLEELSKSIESIQ 155
             + +  +  ++     E + 
Sbjct: 1007 KKTIE-EWADKYKHETEQLV 1025

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 40.1 bits (94), Expect = 1e-04
 Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 5/141 (3%)

Query: 14   TDEIEDEEMARMAI-ATFQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVL 72
              +I+++     ++       E     +  +++  VE +L  +EEE++        L+  
Sbjct: 934  QRKIDEQNKEYKSLLEKMNNLEITYSTETEKLRSDVE-RLRMSEEEAKNATNRVLSLQEE 992

Query: 73   TDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMEL 132
               +RKE+   + +               ++   E KE          EK +L   + + 
Sbjct: 993  IAKLRKELHQTQTEKKTIEEWADKYKHETEQLVSELKEQNTLLK---TEKEELNRRIHDQ 1049

Query: 133  LTESERVRMKKLEELSKSIES 153
              E      KKL E +K +E 
Sbjct: 1050 AKEITETMEKKLVEETKQLEL 1070

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 25/124 (20%), Positives = 56/124 (45%), Gaps = 1/124 (0%)

Query: 32   AREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMAN 91
            A EEE  +  T++K + E  +   E   ++  +  +ELE +   +  E + + ++I    
Sbjct: 1021 AEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQ 1080

Query: 92   RELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALMELLTESERVRMKKLEELSKSI 151
             ++  L   + KKE E + AL    +++ +K   +  + EL +    ++ + LE    + 
Sbjct: 1081 AQIAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQ-EDLESEKAAR 1139

Query: 152  ESIQ 155
               +
Sbjct: 1140 NKAE 1143

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 37.5 bits (87), Expect = 9e-04
 Identities = 20/144 (13%), Positives = 56/144 (38%), Gaps = 11/144 (7%)

Query: 15   DEIEDEEMARMAIATFQAREEEIERKKTEVKERV---ELQLGRAEEESRRLAQIWEELEV 71
            +     E         QA +++++++  +++E++   E    + + E        +++E 
Sbjct: 931  EMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEKVTADGKIKKME- 989

Query: 72   LTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTALME 131
                   ++ ++  + +   +E K L + +        E  E     +K K +  + + E
Sbjct: 990  ------DDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISE 1043

Query: 132  LLTESERVRMKKLEELSKSIESIQ 155
            L    ++   K  +EL K    ++
Sbjct: 1044 LEVRLKKEE-KSRQELEKIKRKLE 1066

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 3e-05
 Identities = 27/187 (14%), Positives = 64/187 (34%), Gaps = 51/187 (27%)

Query: 15  DEIEDEEMA-------RMAIATFQAREEEIER----KKTEVKERVELQLGRAEEESRRLA 63
             +++ +         ++ + T   R +++        T         +    +E + L 
Sbjct: 251 LNVQNAKAWNAFNLSCKILLTT---RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL 307

Query: 64  QIW-----EEL--EVL-TDPMRKEVAVVRKKI-DMANR-------ELKPLGQSIQKK--- 104
             +     ++L  EVL T+P R  ++++ + I D               L   I+     
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRR--LSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNV 365

Query: 105 -----EREYKEALEAFNEKSKEKAQLVTAL---------MELLTESERVRM--KKLEELS 148
                 R+  + L  F   +     L++ +         M ++ +  +  +  K+ +E +
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425

Query: 149 KSIESIQ 155
            SI SI 
Sbjct: 426 ISIPSIY 432

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 37.9 bits (87), Expect = 8e-04
 Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 46/165 (27%)

Query: 9   GSGLSTDEIEDEEMARMAIATFQAREEEIERKKTEVKERVE-LQLGRAEEESRRLAQIWE 67
           GSG +           +A+        +++ K      ++  L L         L  + +
Sbjct: 160 GSGKTW----------VALDV--CLSYKVQCKMDF---KIFWLNLKNCNSPETVLEMLQK 204

Query: 68  ELEVLTDPMRKEVA----VVRKKIDMANRELKPLGQSIQKKEREYKEAL----------- 112
            L    DP     +     ++ +I     EL+ L      K + Y+  L           
Sbjct: 205 -LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRL-----LKSKPYENCLLVLLNVQNAKA 258

Query: 113 -EAFNEKSKEKAQLVT----ALMELLTESERVRMKKLEELSKSIE 152
             AFN   K    L+T     + + L+ +    +  L+  S ++ 
Sbjct: 259 WNAFNLSCK---ILLTTRFKQVTDFLSAATTTHI-SLDHHSMTLT 299

>1w1w_A Structural maintenance of chromosome 1; cohesin, chromosome segregation, cell adhesion, kleisin, MIT cell cycle; HET: ATG; 2.90A {Saccharomyces cerevisiae} SCOP: c.37.1.12 Length = 430

 Score = 38.9 bits (91), Expect = 3e-04
 Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 10/132 (7%)

Query: 30  FQAREEEIERKKTEVKERVELQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDM 89
           FQ   E+I  +      R+  ++      S +  + +EEL+   + + K      K    
Sbjct: 150 FQGDVEQIAAQSPVELSRMFEEV----SGSIQYKKEYEELKEKIEKLSKSATESIKNRRR 205

Query: 90  ANRELKPLGQSIQKKER------EYKEALEAFNEKSKEKAQLVTALMELLTESERVRMKK 143
            + ELK       +          Y EA   F   + E  QL     ++L +  +++ K+
Sbjct: 206 IHGELKTYKSPGLEVLFQGPRGSRYDEAEGRFEVINNETEQLKAEEKKILNQFLKIKKKR 265

Query: 144 LEELSKSIESIQ 155
            E   K+ + + 
Sbjct: 266 KELFEKTFDYVS 277

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	155
3oja_B	597	Anopheles plasmodium-responsive leucine-rich REPE	87.97
1fio_A	196	SSO1 protein; four helix bundle, alpha helix, memb	82.61

>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=87.97  E-value=10  Score=31.37  Aligned_cols=24  Identities=8%  Similarity=0.108  Sum_probs=9.9

Q ss_pred             HHHhhccchhHHHHHHHHHHHHhh
Q 045900           67 EELEVLTDPMRKEVAVVRKKIDMA   90 (155)
Q Consensus        67 eELE~l~DP~RKEV~~vRKkID~v   90 (155)
                      +.+....|.+.+....+.+-+..+
T Consensus       491 ~~~~~~~~~~~~~~~~l~~~~~~~  514 (597)
T 3oja_B          491 RRYRLPKDGLARSSDNLNKVFTHL  514 (597)
T ss_dssp             HHTTCCCCSSSCHHHHHHHHHHHH
T ss_pred             hhcCccccccCCHHHHHHHHHHHH
Confidence            333444444444444444443333

>1fio_A SSO1 protein; four helix bundle, alpha helix, membrane protein; 2.10A {Saccharomyces cerevisiae} SCOP: a.47.2.1

Probab=82.61  E-value=12  Score=27.25  Aligned_cols=27  Identities=11%  Similarity=0.148  Sum_probs=13.4

Q ss_pred             HHHHHhhccchhHHHHHHHHHHHHhhh
Q 045900           65 IWEELEVLTDPMRKEVAVVRKKIDMAN   91 (155)
Q Consensus        65 ireELE~l~DP~RKEV~~vRKkID~vn   91 (155)
                      ++++|+.+.+-+.+=+..++++|..+.
T Consensus        47 ~~~~i~~l~~~i~~~~~~~~~~lk~l~   73 (196)
T 1fio_A           47 LRHSLDNFVAQATDLQFKLKNEIKSAQ   73 (196)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            445555555555555555555544443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	155
d1fioa_	196	Sso1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	81.27

>d1fioa_ a.47.2.1 (A:) Sso1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: STAT-like
superfamily: t-snare proteins
family: t-snare proteins
domain: Sso1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=81.27  E-value=5.3  Score=26.14  Aligned_cols=89  Identities=11%  Similarity=0.156  Sum_probs=45.9

Q ss_pred             HHhhhhHHHhHHHHHHHHHHhhccchhHHHHHHHHHHHHhhhhcccchhhhHHHhHHHHHHHHHHhhhhhHHHHHHHHHH
Q 045900           50 LQLGRAEEESRRLAQIWEELEVLTDPMRKEVAVVRKKIDMANRELKPLGQSIQKKEREYKEALEAFNEKSKEKAQLVTAL  129 (155)
Q Consensus        50 aqLGrvEeetkrLa~ireELE~l~DP~RKEV~~vRKkID~vnreLKpLg~scqKKEkEYKeaLEafNEKnkEKa~LV~~L  129 (155)
                      ..|-.+.....+|..+..-+  ++.|...+...++..|+.+..++..+.+.|...-+..+.--..-+.+.--...|.+.|
T Consensus        16 ~~i~~i~~~i~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~l~~~l   93 (196)
T d1fioa_          16 RDLDKYDHTINQVDSLHKRL--LTEVNEEQASHLRHSLDNFVAQATDLQFKLKNEIKSAQRDGIHDTNKQAQAENSRQRF   93 (196)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH--TTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHh--cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHH
Confidence            33344444444455444433  2344555666677777777777777777776554444332222222223344455555


Q ss_pred             HHHhhHHHHHH
Q 045900          130 MELLTESERVR  140 (155)
Q Consensus       130 mELv~ESErlR  140 (155)
                      .+++..--..-
T Consensus        94 ~~~~~~f~~~q  104 (196)
T d1fioa_          94 LKLIQDYRIVD  104 (196)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            55555444433