Citrus Sinensis ID: 045941

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100--
Protein Sequence
FNFTPDEDDMSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS
Secondary Structure (PSIPRED)
cccccccccHHcHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccccccccccHHHHHHccccccccccccHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHcccccHHHHHHHHHHHHcccEEcccccccccHHHHHHHHcccccccccHHHHHccccHHHcccccccccccccccHHHHHHcccccccccccccc
Coil and Loop (DISEMBL)
fnftpdeddmssgqERAELDAKarqgqtvvpggtggkspeAQEHLAegrsrggqtrkeqlgtegyqemggkgglstgdqsgRERAAqewgidvneskvttts
Flexible Loop (DISEMBL)
fnftpdeddmssgQERAELdakarqgqtvvpggtggkspEAQEHlaegrsrggqtrkeqlgtegyqemggkggLSTGDQSGREraaqewgidvneskvttts
Low Complexity Region (SEG)
FNFTPDEDDMSSGQERAELDAKARqgqtvvpggtggKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS
Disordered region (IsUnstruct)
******************************************************************************************************
Disordered Region (DISOPRED)
***TP******************************************************************************************S*V****
Disordered Region (DISEMBL)
**********************************************************QLGTEGYQEMGGK*****************WGIDV*********
Disordered Region (DISPRO)
**************************************P***************************************************************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
FNFTPDEDDMSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	102	2.2.26 [Sep-21-2011]
P17639	92	EMB-1 protein OS=Daucus c	N/A	no	0.882	0.978	0.758	2e-29
P46520	95	Embryonic abundant protei	yes	no	0.901	0.968	0.75	2e-29
P22701	94	Em protein CS41 OS=Tritic	N/A	no	0.901	0.978	0.757	2e-29
Q08000	93	Em protein H2 OS=Triticum	N/A	no	0.901	0.989	0.734	2e-28
P46517	91	Late embryogenesis abunda	N/A	no	0.872	0.978	0.758	2e-28
Q05190	93	Late embryogenesis abunda	N/A	no	0.901	0.989	0.723	3e-28
P04568	93	Em protein OS=Triticum ae	N/A	no	0.901	0.989	0.723	3e-28
P42755	93	Em protein H5 OS=Triticum	N/A	no	0.901	0.989	0.734	4e-28
P46532	93	Late embryogenesis abunda	N/A	no	0.901	0.989	0.723	4e-28
Q02973	92	Em-like protein GEA6 OS=A	yes	no	0.901	1.0	0.688	2e-27

>sp|P17639|EMB1_DAUCA EMB-1 protein OS=Daucus carota GN=EMB-1 PE=2 SV=1

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 77/91 (84%), Gaps = 1/91 (1%)

Query: 10  MSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMG 69
           M+S QE+ ELDA+ARQG+TVVPGGTGGKS EAQ+HLAEGRS+GGQTRKEQLG EGY EMG
Sbjct: 1   MASQQEKKELDARARQGETVVPGGTGGKSLEAQQHLAEGRSKGGQTRKEQLGGEGYHEMG 60

Query: 70  GKGGLSTGDQSGRERAAQEWGIDVNESKVTT 100
            KGGLS  D SG ERA QE GID++ESK  T
Sbjct: 61  RKGGLSNNDMSGGERAEQE-GIDIDESKFRT 90

Daucus carota (taxid: 4039)

>sp|P46520|EMP1_ORYSJ Embryonic abundant protein 1 OS=Oryza sativa subsp. japonica GN=EMP1 PE=2 SV=1

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/96 (75%), Positives = 83/96 (86%), Gaps = 4/96 (4%)

Query: 10  MSSGQE---RAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQ 66
           M+SGQ+   R+ELD  AR+GQTVVPGGTGGKS EAQE+LAEGRSRGGQTRKEQ+G EGY+
Sbjct: 1   MASGQQQQGRSELDRMAREGQTVVPGGTGGKSLEAQENLAEGRSRGGQTRKEQMGEEGYR 60

Query: 67  EMGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           EMG KGGLSTGD+SG ERAA+E GID++ESK  T S
Sbjct: 61  EMGRKGGLSTGDESGGERAARE-GIDIDESKYKTKS 95

Em protein may act as a cytoplasm protectant during desiccation.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|P22701|EM2_WHEAT Em protein CS41 OS=Triticum aestivum GN=EM PE=2 SV=1

 Score =  127 bits (319), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/95 (75%), Positives = 81/95 (85%), Gaps = 3/95 (3%)

Query: 10  MSSGQE--RAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQE 67
           M+SGQE  R+ELD+ AR+GQTVVPGGTGGKS EAQE LAEGRSRGGQTRKEQ+G EGY E
Sbjct: 1   MASGQEKGRSELDSLAREGQTVVPGGTGGKSYEAQEKLAEGRSRGGQTRKEQMGEEGYSE 60

Query: 68  MGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           MG KGGLST D+SG ERAA+E GID++ESK  T S
Sbjct: 61  MGRKGGLSTNDESGGERAARE-GIDIDESKFKTKS 94

It is thought to provide protection for the cytoplasm during the desiccation stage of embryo development.

Triticum aestivum (taxid: 4565)

>sp|Q08000|EM3_WHEAT Em protein H2 OS=Triticum aestivum GN=EMH2 PE=2 SV=1

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/94 (73%), Positives = 81/94 (86%), Gaps = 2/94 (2%)

Query: 10  MSSGQ-ERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEM 68
           M+SGQ ER++LD KAR+G+TVVPGGTGGKS EA E+LAEGRSRGGQTR+EQ+G EGY EM
Sbjct: 1   MASGQQERSQLDRKAREGETVVPGGTGGKSLEAHENLAEGRSRGGQTRREQMGEEGYSEM 60

Query: 69  GGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           G KGGLST D+SG ERAA+E GID++ESK  T S
Sbjct: 61  GRKGGLSTNDESGGERAARE-GIDIDESKFKTKS 93

It is thought to provide protection for the cytoplasm during the desiccation stage of embryo development.

Triticum aestivum (taxid: 4565)

>sp|P46517|EMB5_MAIZE Late embryogenesis abundant protein EMB564 OS=Zea mays PE=2 SV=1

 Score =  124 bits (311), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 79/91 (86%), Gaps = 2/91 (2%)

Query: 10 MSSGQE-RAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEM 68
          M+SGQE R ELD KAR+G+TVVPGGTGGKS EAQEHLAEGRSRGGQTR+EQLG +GY EM
Sbjct: 1  MASGQESRKELDRKAREGETVVPGGTGGKSVEAQEHLAEGRSRGGQTRREQLGQQGYSEM 60

Query: 69 GGKGGLSTGDQSGRERAAQEWGIDVNESKVT 99
          G KGGLST D+SG ERAA+E G+ ++ESK T
Sbjct: 61 GKKGGLSTTDESGGERAARE-GVTIDESKFT 90

LEA proteins are late embryonic proteins abundant in higher plant seed embryos. They may play an essential role in seed survival and in controlling water exchanges during seed desiccation and imbibition.

Zea mays (taxid: 4577)

>sp|Q05190|LE19A_HORVU Late embryogenesis abundant protein B19.1A OS=Hordeum vulgare GN=B19.1A PE=2 SV=1

 Score =  123 bits (309), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/94 (72%), Positives = 82/94 (87%), Gaps = 2/94 (2%)

Query: 10  MSSGQ-ERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEM 68
           M+SGQ ER++LD KAR+G+TVVPGGTGGKS EAQ++LAEGRSRGGQTR+EQ+G EGY EM
Sbjct: 1   MASGQQERSQLDRKAREGETVVPGGTGGKSLEAQQNLAEGRSRGGQTRREQMGQEGYSEM 60

Query: 69  GGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           G KGGLS+ D+SG ERAA+E GID++ESK  T S
Sbjct: 61  GRKGGLSSNDESGGERAARE-GIDIDESKFKTKS 93

Lea proteins are late embryonic proteins abundant in higher plant seed embryos. It may have a role in desiccation tolerance by acting as an osmoprotective protein or as a desiccation-damage repair protein.

Hordeum vulgare (taxid: 4513)

>sp|P04568|EM1_WHEAT Em protein OS=Triticum aestivum GN=EM PE=2 SV=1

 Score =  123 bits (308), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/94 (72%), Positives = 82/94 (87%), Gaps = 2/94 (2%)

Query: 10  MSSGQ-ERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEM 68
           M+SGQ ER++LD KAR+G+TVVPGGTGGKS EAQE+LAEGRSRGGQTR+EQ+G EGY +M
Sbjct: 1   MASGQQERSQLDRKAREGETVVPGGTGGKSLEAQENLAEGRSRGGQTRREQMGEEGYSQM 60

Query: 69  GGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           G KGGLST D+SG +RAA+E GID++ESK  T S
Sbjct: 61  GRKGGLSTNDESGGDRAARE-GIDIDESKFKTKS 93

It is thought to provide protection for the cytoplasm during the desiccation stage of embryo development.

Triticum aestivum (taxid: 4565)

>sp|P42755|EM4_WHEAT Em protein H5 OS=Triticum aestivum GN=EMH5 PE=2 SV=1

 Score =  123 bits (308), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 69/94 (73%), Positives = 82/94 (87%), Gaps = 2/94 (2%)

Query: 10  MSSGQ-ERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEM 68
           M+SGQ ER+ELD  AR+G+TVVPGGTGGKS EAQEHLA+GRSRGG+TRKEQLG EGY+EM
Sbjct: 1   MASGQQERSELDRMAREGETVVPGGTGGKSLEAQEHLADGRSRGGETRKEQLGEEGYREM 60

Query: 69  GGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           G KGGLST ++SG ERAA+E GI+++ESK  T S
Sbjct: 61  GRKGGLSTMEESGGERAARE-GIEIDESKFKTKS 93

It is thought to provide protection for the cytoplasm during the desiccation stage of embryo development.

Triticum aestivum (taxid: 4565)

>sp|P46532|LE19B_HORVU Late embryogenesis abundant protein B19.1B OS=Hordeum vulgare GN=B19.1B PE=3 SV=1

 Score =  122 bits (307), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/94 (72%), Positives = 81/94 (86%), Gaps = 2/94 (2%)

Query: 10  MSSGQ-ERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEM 68
           M+SGQ ER++LD KAR+G+TVVPGGTGGKS EA ++LAEGRSRGGQTR+EQ+G EGY EM
Sbjct: 1   MASGQQERSQLDRKAREGETVVPGGTGGKSLEAHDNLAEGRSRGGQTRREQMGEEGYSEM 60

Query: 69  GGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           G KGGLST D+SG ERAA+E GID++ESK  T S
Sbjct: 61  GRKGGLSTNDESGGERAARE-GIDIDESKFKTKS 93

Lea proteins are late embryonic proteins abundant in higher plant seed embryos. It may have a role in desiccation tolerance by acting as an osmoprotective protein or as a desiccation-damage repair protein.

Hordeum vulgare (taxid: 4513)

>sp|Q02973|EM6_ARATH Em-like protein GEA6 OS=Arabidopsis thaliana GN=EM6 PE=1 SV=1

 Score =  121 bits (303), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 64/93 (68%), Positives = 80/93 (86%), Gaps = 1/93 (1%)

Query: 10  MSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMG 69
           M+S QE+ +LD +A++G+TVVPGGTGGKS EAQ+HLAEGRSRGGQTRKEQLGTEGYQ+MG
Sbjct: 1   MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQLGTEGYQQMG 60

Query: 70  GKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
            KGGLSTGD+ G E A +E G++++ESK  T +
Sbjct: 61  RKGGLSTGDKPGGEHAEEE-GVEIDESKFRTKT 92

It is thought to provide protection for the cytoplasm during the desiccation stage of embryo development.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
297736589	128	unnamed protein product [Vitis vinifera]	0.941	0.75	0.773	2e-31
147779324	95	hypothetical protein VITISV_041257 [Viti	0.901	0.968	0.795	3e-30
225448477	95	PREDICTED: EMB-1 protein-like [Vitis vin	0.901	0.968	0.795	5e-30
89275331	90	EMZ08 [Elaeis guineensis]	0.882	1.0	0.802	9e-30
48596911	94	embryonic abundant protein [Bromus inerm	0.901	0.978	0.757	6e-28
119316	92	RecName: Full=EMB-1 protein gi|18341|emb	0.882	0.978	0.758	7e-28
115463347	95	Os05g0349800 [Oryza sativa Japonica Grou	0.901	0.968	0.75	8e-28
119315	94	RecName: Full=Em protein CS41 gi|295844|	0.901	0.978	0.757	9e-28
224109302	93	predicted protein [Populus trichocarpa]	0.901	0.989	0.755	1e-27
18499	110	late embryogenesis abundant protein [Gos	0.882	0.818	0.666	3e-27

>gi|297736589|emb|CBI25460.3| unnamed protein product [Vitis vinifera]

 Score =  139 bits (350), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/97 (77%), Positives = 86/97 (88%), Gaps = 1/97 (1%)

Query: 6   DEDDMSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGY 65
           +E++M+S +ER++LDAKARQG+TVVPGGTGGKS EAQEHLAEGRSRGGQTRKEQLGTEGY
Sbjct: 30  EEEEMASQKERSQLDAKARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGTEGY 89

Query: 66  QEMGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
            EMG KGGLSTGDQSG ERA +E GI ++ESK  T S
Sbjct: 90  HEMGRKGGLSTGDQSGGERAEEE-GIPIDESKSRTKS 125

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147779324|emb|CAN67857.1| hypothetical protein VITISV_041257 [Vitis vinifera]

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/93 (79%), Positives = 82/93 (88%), Gaps = 1/93 (1%)

Query: 10  MSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMG 69
           M+S +ER++LDAKARQG+TVVPGGTGGKS EAQEHLAEGRSRGGQTRKEQLGTEGY EMG
Sbjct: 1   MASQKERSQLDAKARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGTEGYHEMG 60

Query: 70  GKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
            KGGLSTGDQSG ERA +E GI ++ESK  T S
Sbjct: 61  RKGGLSTGDQSGGERAEEE-GIXIDESKSRTKS 92

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225448477|ref|XP_002273618.1| PREDICTED: EMB-1 protein-like [Vitis vinifera]

 Score =  134 bits (338), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 74/93 (79%), Positives = 82/93 (88%), Gaps = 1/93 (1%)

Query: 10  MSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMG 69
           M+S +ER++LDAKARQG+TVVPGGTGGKS EAQEHLAEGRSRGGQTRKEQLGTEGY EMG
Sbjct: 1   MASQKERSQLDAKARQGETVVPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGTEGYHEMG 60

Query: 70  GKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
            KGGLSTGDQSG ERA +E GI ++ESK  T S
Sbjct: 61  RKGGLSTGDQSGGERAEEE-GIPIDESKSRTKS 92

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|89275331|gb|ABD66069.1| EMZ08 [Elaeis guineensis]

 Score =  134 bits (336), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 73/91 (80%), Positives = 81/91 (89%), Gaps = 1/91 (1%)

Query: 10  MSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMG 69
           M++ QERAELDAKARQG+TVVPGGTGG S EAQEHLAEGRSRGGQTR+EQLGTEGYQEMG
Sbjct: 1   MATRQERAELDAKARQGETVVPGGTGGHSLEAQEHLAEGRSRGGQTRREQLGTEGYQEMG 60

Query: 70  GKGGLSTGDQSGRERAAQEWGIDVNESKVTT 100
            KGGLST D+SG ERAA+E GI ++ESK  T
Sbjct: 61  RKGGLSTTDESGGERAARE-GIQIDESKFRT 90

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|48596911|dbj|BAD22768.1| embryonic abundant protein [Bromus inermis]

 Score =  127 bits (320), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/95 (75%), Positives = 82/95 (86%), Gaps = 3/95 (3%)

Query: 10  MSSGQE--RAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQE 67
           M+SGQE  R+ELD+ AR+GQTVVPGGTGGKS EAQE+LAEGRSRGGQTRKEQ+G EGY E
Sbjct: 1   MASGQEKGRSELDSLAREGQTVVPGGTGGKSYEAQENLAEGRSRGGQTRKEQMGEEGYSE 60

Query: 68  MGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           MG KGGLST D+SG ERAA+E GID++ESK  T S
Sbjct: 61  MGRKGGLSTNDESGGERAARE-GIDIDESKFKTKS 94

Source: Bromus inermis

Species: Bromus inermis

Genus: Bromus

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|119316|sp|P17639.1|EMB1_DAUCA RecName: Full=EMB-1 protein gi|18341|emb|CAA35610.1| unnamed protein product [Daucus carota] gi|505193|emb|CAA42717.1| EMB-1 protein [Daucus carota] gi|57506546|dbj|BAD86647.1| EMB1 protein [Daucus carota]

 Score =  127 bits (319), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/91 (75%), Positives = 77/91 (84%), Gaps = 1/91 (1%)

Query: 10  MSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMG 69
           M+S QE+ ELDA+ARQG+TVVPGGTGGKS EAQ+HLAEGRS+GGQTRKEQLG EGY EMG
Sbjct: 1   MASQQEKKELDARARQGETVVPGGTGGKSLEAQQHLAEGRSKGGQTRKEQLGGEGYHEMG 60

Query: 70  GKGGLSTGDQSGRERAAQEWGIDVNESKVTT 100
            KGGLS  D SG ERA QE GID++ESK  T
Sbjct: 61  RKGGLSNNDMSGGERAEQE-GIDIDESKFRT 90

Source: Daucus carota

Species: Daucus carota

Genus: Daucus

Family: Apiaceae

Order: Apiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115463347|ref|NP_001055273.1| Os05g0349800 [Oryza sativa Japonica Group] gi|1169521|sp|P46520.1|EMP1_ORYSJ RecName: Full=Embryonic abundant protein 1 gi|20200|emb|CAA44836.1| Emp1 [Oryza sativa Japonica Group] gi|733119|gb|AAA81015.1| similar to embryonic abundant protein emp1, PIR Accession Number S22483; similar to the product encoded by the wheat Em gene, Swiss-Prot Accession Number P22701 [Oryza sativa Japonica Group] gi|55168200|gb|AAV44066.1| LEA 1 [Oryza sativa Japonica Group] gi|113578824|dbj|BAF17187.1| Os05g0349800 [Oryza sativa Japonica Group] gi|215686566|dbj|BAG88819.1| unnamed protein product [Oryza sativa Japonica Group] gi|222631224|gb|EEE63356.1| hypothetical protein OsJ_18167 [Oryza sativa Japonica Group]

 Score =  127 bits (319), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 72/96 (75%), Positives = 83/96 (86%), Gaps = 4/96 (4%)

Query: 10  MSSGQE---RAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQ 66
           M+SGQ+   R+ELD  AR+GQTVVPGGTGGKS EAQE+LAEGRSRGGQTRKEQ+G EGY+
Sbjct: 1   MASGQQQQGRSELDRMAREGQTVVPGGTGGKSLEAQENLAEGRSRGGQTRKEQMGEEGYR 60

Query: 67  EMGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           EMG KGGLSTGD+SG ERAA+E GID++ESK  T S
Sbjct: 61  EMGRKGGLSTGDESGGERAARE-GIDIDESKYKTKS 95

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|119315|sp|P22701.1|EM2_WHEAT RecName: Full=Em protein CS41 gi|295844|emb|CAA36323.1| Em [Triticum aestivum] gi|4007840|emb|CAA65309.1| Em protein [Triticum aestivum]

 Score =  127 bits (319), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 72/95 (75%), Positives = 81/95 (85%), Gaps = 3/95 (3%)

Query: 10  MSSGQE--RAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQE 67
           M+SGQE  R+ELD+ AR+GQTVVPGGTGGKS EAQE LAEGRSRGGQTRKEQ+G EGY E
Sbjct: 1   MASGQEKGRSELDSLAREGQTVVPGGTGGKSYEAQEKLAEGRSRGGQTRKEQMGEEGYSE 60

Query: 68  MGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           MG KGGLST D+SG ERAA+E GID++ESK  T S
Sbjct: 61  MGRKGGLSTNDESGGERAARE-GIDIDESKFKTKS 94

Source: Triticum aestivum

Species: Triticum aestivum

Genus: Triticum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109302|ref|XP_002315152.1| predicted protein [Populus trichocarpa] gi|222864192|gb|EEF01323.1| predicted protein [Populus trichocarpa]

 Score =  126 bits (317), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/94 (75%), Positives = 81/94 (86%), Gaps = 2/94 (2%)

Query: 10  MSSGQE-RAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEM 68
           MSS Q+ R ELDA+AR+G+TV+PGGTGG+S EAQEHLAEGRSRGGQTRKEQLGTEGYQEM
Sbjct: 1   MSSNQQLREELDARARRGETVIPGGTGGRSLEAQEHLAEGRSRGGQTRKEQLGTEGYQEM 60

Query: 69  GGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
           G KGGLST D+SG ERA +E GI ++ESK  T S
Sbjct: 61  GRKGGLSTTDESGGERAERE-GIPIDESKFKTKS 93

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18499|emb|CAA38374.1| late embryogenesis abundant protein [Gossypium hirsutum] gi|167330|gb|AAA33057.1| embryogensis abundant protein [Gossypium hirsutum] gi|167353|gb|AAB00728.1| water-stress protectant protein [Gossypium hirsutum] gi|167355|gb|AAA33064.1| late embryogenesis-abundant protein 2-D [Gossypium hirsutum]

 Score =  125 bits (315), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/111 (66%), Positives = 82/111 (73%), Gaps = 21/111 (18%)

Query: 10  MSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQL--------- 60
           M+S QER ELDA+ARQG+TV+PGGTGGKS EAQEHLAEGRSRGGQTRKEQL         
Sbjct: 1   MASQQERQELDARARQGETVIPGGTGGKSLEAQEHLAEGRSRGGQTRKEQLGREGYQELG 60

Query: 61  -----------GTEGYQEMGGKGGLSTGDQSGRERAAQEWGIDVNESKVTT 100
                      GTEGYQEMG KGGLST D+SG ERAA+E GID++ESK  T
Sbjct: 61  SKGGQTRKEQIGTEGYQEMGRKGGLSTMDKSGVERAAEE-GIDIDESKYRT 110

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	102
UNIPROTKB|P46520	95	EMP1 "Embryonic abundant prote	0.901	0.968	0.635	5.3e-24
TAIR|locus:2065041	92	GEA6 "AT2G40170" [Arabidopsis	0.882	0.978	0.593	7.8e-23
TAIR|locus:2074383	152	EM1 "AT3G51810" [Arabidopsis t	0.852	0.572	0.528	1.6e-15

UNIPROTKB|P46520 EMP1 "Embryonic abundant protein 1" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 61/96 (63%), Positives = 71/96 (73%)

Query:    10 MSSGQE---RAELDAKARXXXXXXXXXXXXKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQ 66
             M+SGQ+   R+ELD  AR            KS EAQE+LAEGRSRGGQTRKEQ+G EGY+
Sbjct:     1 MASGQQQQGRSELDRMAREGQTVVPGGTGGKSLEAQENLAEGRSRGGQTRKEQMGEEGYR 60

Query:    67 EMGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
             EMG KGGLSTGD+SG ERAA+E GID++ESK  T S
Sbjct:    61 EMGRKGGLSTGDESGGERAARE-GIDIDESKYKTKS 95

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

TAIR|locus:2065041 GEA6 "AT2G40170" [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 54/91 (59%), Positives = 67/91 (73%)

Query:    10 MSSGQERAELDAKARXXXXXXXXXXXXKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMG 69
             M+S QE+ +LD +A+            KS EAQ+HLAEGRSRGGQTRKEQLGTEGYQ+MG
Sbjct:     1 MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQLGTEGYQQMG 60

Query:    70 GKGGLSTGDQSGRERAAQEWGIDVNESKVTT 100
              KGGLSTGD+ G E A +E G++++ESK  T
Sbjct:    61 RKGGLSTGDKPGGEHAEEE-GVEIDESKFRT 90

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0048316 "seed development" evidence=IMP

GO:0048700 "acquisition of desiccation tolerance in seed" evidence=IMP

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;TAS

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016114 "terpenoid biosynthetic process" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

TAIR|locus:2074383 EM1 "AT3G51810" [Arabidopsis thaliana (taxid:3702)]

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 47/89 (52%), Positives = 55/89 (61%)

Query:    10 MSSGQ-ERAELDAKARXXXXXXXXXXXXKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEM 68
             M+S Q  R ELD KA+             S EAQEHLAEGRS+GGQTRKEQLG EGYQE+
Sbjct:     1 MASKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEI 60

Query:    69 GGKGGLSTGDQSGRERAAQEWGIDVNESK 97
             G KGG +  +Q G E   QE G    E++
Sbjct:    61 GHKGGEARKEQLGHE-GYQEMGHKGGEAR 88

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;TAS

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA;TAS

GO:0009845 "seed germination" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0048825 "cotyledon development" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

GO:0051301 "cell division" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q02973	EM6_ARATH	No assigned EC number	0.6881	0.9019	1.0	yes	no
P22701	EM2_WHEAT	No assigned EC number	0.7578	0.9019	0.9787	N/A	no
P42755	EM4_WHEAT	No assigned EC number	0.7340	0.9019	0.9892	N/A	no
Q40864	EML_PICGL	No assigned EC number	0.6966	0.8627	0.9670	N/A	no
P46514	LE10_HELAN	No assigned EC number	0.7313	0.6568	0.7282	N/A	no
P09443	LE19_GOSHI	No assigned EC number	0.6629	0.8627	0.8627	N/A	no
P46517	EMB5_MAIZE	No assigned EC number	0.7582	0.8725	0.9780	N/A	no
P46532	LE19B_HORVU	No assigned EC number	0.7234	0.9019	0.9892	N/A	no
Q05190	LE19A_HORVU	No assigned EC number	0.7234	0.9019	0.9892	N/A	no
P17639	EMB1_DAUCA	No assigned EC number	0.7582	0.8823	0.9782	N/A	no
P04568	EM1_WHEAT	No assigned EC number	0.7234	0.9019	0.9892	N/A	no
Q08000	EM3_WHEAT	No assigned EC number	0.7340	0.9019	0.9892	N/A	no
P46520	EMP1_ORYSJ	No assigned EC number	0.75	0.9019	0.9684	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	102
pfam00477	109	pfam00477, LEA_5, Small hydrophilic plant seed pro	7e-19

>gnl|CDD|109530 pfam00477, LEA_5, Small hydrophilic plant seed protein

 Score = 74.7 bits (183), Expect = 7e-19
 Identities = 68/107 (63%), Positives = 78/107 (72%), Gaps = 21/107 (19%)

Query: 11  SSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQ---- 66
           S  +ER ELD +A+QG+TVVPGGTGGKS EAQEHLAEGRS+GGQTRKEQLGTEGYQ    
Sbjct: 3   SGQEEREELDRRAKQGETVVPGGTGGKSLEAQEHLAEGRSKGGQTRKEQLGTEGYQEMGT 62

Query: 67  ----------------EMGGKGGLSTGDQSGRERAAQEWGIDVNESK 97
                           EMG KGGLST D+SG ERAA+E GI+++ESK
Sbjct: 63  KGGQTRKEQMGHEGYSEMGRKGGLSTMDESGGERAARE-GIEIDESK 108

Length = 109

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	102
PF00477	109	LEA_5: Small hydrophilic plant seed protein; Inter	100.0

>PF00477 LEA_5: Small hydrophilic plant seed protein; InterPro: IPR000389 This entry contains a number of bacterial proteins annotated as stress-induced and members of the plant LEA (late embryogenesis abundant) proteins, which are small hydrophilic plant seed proteins that are structurally related

Probab=100.00  E-value=1.8e-43  Score=252.77  Aligned_cols=88  Identities=69%  Similarity=1.026  Sum_probs=85.0

Q ss_pred             hhhhh-hHHHHHHHHhcCCccccCCCCCCCHHHHHHHHhhccCCccchhhhhcchhhh--------------------hh
Q 045941           10 MSSGQ-ERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQ--------------------EM   68 (102)
Q Consensus        10 Mas~q-~r~eLd~rAr~GeTVVpgGTGGksleAQe~LAEGrsrGGQtRkEQLG~EGYq--------------------EM   68 (102)
                      |||+| +|++||++||+|+||||||||||||+||+||||||+|||+||++|+|+|+|+                    +|
T Consensus         1 ma~~q~~r~eld~~aregetvv~gGtggksl~aqe~laEggkKGGetr~e~~G~E~YqEiG~KGGe~t~e~~g~EfY~ei   80 (109)
T PF00477_consen    1 MASGQESREELDARAREGETVVPGGTGGKSLEAQERLAEGGKKGGETRKEQHGKEFYQEIGKKGGEATKEKHGKEFYEEI   80 (109)
T ss_pred             CcchhHHHHHHHHHHhcCCccccCCCCCCcchHHHHHHHHHhhcccchhhhcchhHHHHHhhccCccchhhhchHHHHHH
Confidence            89988 7999999999999999999999999999999999999999999888888888                    88


Q ss_pred             ccCCCCcccCCCchhHHHHhhCCCCCCccc
Q 045941           69 GGKGGLSTGDQSGRERAAQEWGIDVNESKV   98 (102)
Q Consensus        69 GrKGGlst~d~sg~Era~~e~Gi~iDEskf   98 (102)
                      |||||+++++++|+|||++| ||+||||||
T Consensus        81 GrKGG~~~~~~~g~era~~e-g~~~de~~~  109 (109)
T PF00477_consen   81 GRKGGEATSDKSGGERAAEE-GIEIDESKF  109 (109)
T ss_pred             HHhhCcccccccchHHHHHc-CCCcccccC
Confidence            99999999999999999999 999999998

These proteins contains from 83 to 153 amino acid residues and may play a role [, ] in equipping the seed for survival, maintaining a minimal level of hydration in the dry organism and preventing the denaturation of cytoplasmic components. They may also play a role during imbibition by controlling water uptake.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00