Citrus Sinensis ID: 045946

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210----
Protein Sequence
MAEENPKIPLAPPRNEYPRSDQEYAPAVIESQRKSSKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVCSS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHEEEEEEccccEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEcccEEEEEEEccEEEEEEccEEEEEEEEcccEEccccEEEEEEEEEEEEEcccccccHHHHHHHcccEEEEEEEEEEEEEEEEcEEEEEEEEEEEEEEEEEEccccEEEEccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccccHHHcccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccccccccccccEEEEEEEEEEEEcccccEEEEcccEEEEEEccEEEEEEEcccccccccccEEEEEEEEEEEcHHHHcccccHHHHHHcccEEEEEEEEEccEEEEEEEEEEEEEEEEEEEEEEEEcccEEEccEccc
Coil and Loop (DISEMBL)
maeenpkiplapprneyprsdqeyaPAVIESQRKSSKCLVYVLVTIVTVSAALLISAsiflrpntpevqLESVTVknlshgngtspsfNVTLVTELTidnenygyfeykncsgsvfygsvtvgdvkirdgrveareVKRINVTVDVDvrsngnldnqnlrsdinSGIVKLNSYAKLHGNVSLFNVlkktktpeldcSMNLVLARRAVEDLVCSS
Flexible Loop (DISEMBL)
maeenpkiplapprneyprsDQEYAPAVIESQRKSSKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVknlshgngtspsfnVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKirdgrvearevkrinvtvdvdvrsngnldnqnlrsdiNSGIVKLNSYAKLHGNVSLFNVLKktktpeldcSMNLVLARRAVEDLVCSS
Low Complexity Region (SEG)
MAEENPKIPLAPPRNEYPRSDQEYAPAVIESQRKSSKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVCSS
Disordered region (IsUnstruct)
************************************KCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLV***
Disordered Region (DISOPRED)
******K*****************************KCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAV*******
Disordered Region (DISEMBL)
MAEENPKIPLAPPRNEYPRSDQEYAPAVIESQRKSSKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVCSS
Disordered Region (DISPRO)
******************************SQRKSSKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDL*C**
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAEENPKIPLAPPRNEYPRSDQEYAPAVIESQRKSSKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVCSS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
255537611	221	conserved hypothetical protein [Ricinus	0.976	0.945	0.470	3e-45
225426122	213	PREDICTED: uncharacterized protein LOC10	0.976	0.981	0.437	2e-40
42571991	214	late embryogenesis abundant hydroxyproli	0.971	0.971	0.373	3e-27
297840081	214	hypothetical protein ARALYDRAFT_474948 [	0.971	0.971	0.373	1e-26
357481529	189	hypothetical protein MTR_5g009910 [Medic	0.869	0.984	0.403	1e-26
147843842	186	hypothetical protein VITISV_037464 [Viti	0.817	0.940	0.335	1e-22
6692110	1195	F22C12.17 [Arabidopsis thaliana]	0.841	0.150	0.382	2e-22
302143750	297	unnamed protein product [Vitis vinifera]	0.836	0.602	0.318	2e-22
255545130	217	conserved hypothetical protein [Ricinus	0.971	0.958	0.295	1e-21
225454320	220	PREDICTED: uncharacterized protein LOC10	0.981	0.954	0.273	3e-21

>gi|255537611|ref|XP_002509872.1| conserved hypothetical protein [Ricinus communis] gi|223549771|gb|EEF51259.1| conserved hypothetical protein [Ricinus communis]

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/223 (47%), Positives = 146/223 (65%), Gaps = 14/223 (6%)

Query: 1   MAEENPKIPLAPPRNEYPRSDQEYAPAV--IESQRKSSKCLVYVLVTIVTVSAALLISAS 58
           M E+N  +PLAP     PRSD+E+A     +  Q +SSKCLVYVL  IV +SA +L+ A 
Sbjct: 1   MVEDNQIVPLAPAETN-PRSDEEFAAVKPNLRLQERSSKCLVYVLAGIVILSAVILVFAL 59

Query: 59  IFLRPNTPEVQLESVTVKNL-----SHGNGTS---PSFNVTLVTELTIDNENYGYFEYKN 110
           + LRP  P  +L  V +K+L     S GNG +   P+FN+TL +EL I+N N+G F+Y N
Sbjct: 60  VVLRPVNPNAELSFVRLKDLNYAAGSGGNGNNVSLPAFNMTLESELKIENSNFGEFKYDN 119

Query: 111 CSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDN-QNLRSDINSGIVK 169
            S  VFYG + VG+  +R+GRV AR+  R+NV   V+VRS+  + N  +L SDINSGI+K
Sbjct: 120 TSARVFYGGMAVGEAILREGRVSARDTLRMNVK--VEVRSHKYIYNGTDLTSDINSGILK 177

Query: 170 LNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
           LNS+AK  G V+L  + KK ++  +DCS +L L  R+++DLVC
Sbjct: 178 LNSHAKFSGRVNLLQIAKKRRSASMDCSFSLDLRSRSIQDLVC 220

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225426122|ref|XP_002272642.1| PREDICTED: uncharacterized protein LOC100241699 [Vitis vinifera]

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/215 (43%), Positives = 141/215 (65%), Gaps = 6/215 (2%)

Query: 1   MAEENPKIPLAPPRNEYPRSDQEYA---PAVIESQRKSSKCLVYVLVTIVTVSAALLISA 57
           M E+N   PLAP R  + +SD+E+    P   +  R+SSKC VYVL  +VT++A  L+ A
Sbjct: 1   MPEDNQFQPLAPAR-LHGKSDEEFGVFKPRASKPPRRSSKCPVYVLAGLVTLAAIALVFA 59

Query: 58  SIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFY 117
              LR   P+V+L+SV VKNL+HG   SPSFNVTL  E+++ N+N+G F ++N + +V Y
Sbjct: 60  LAVLRVEAPDVELKSVAVKNLTHGTSPSPSFNVTLTAEVSVQNKNFGAFNFENGTATVLY 119

Query: 118 GSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKLH 177
             + VGD +     VE+R+ KR+NVT  +DVRS+   +++NL SDI+SG V L +YA++ 
Sbjct: 120 EGMVVGDEEFSKAHVESRKTKRMNVT--LDVRSDRLWNDKNLSSDISSGSVNLTTYAQVT 177

Query: 178 GNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
           G V +  V+++  T  ++CSM L L   +++DLVC
Sbjct: 178 GKVRVMKVVRRRTTARMNCSMTLNLTSSSIQDLVC 212

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42571991|ref|NP_974086.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|49823490|gb|AAT68728.1| hypothetical protein At1g64065 [Arabidopsis thaliana] gi|55740529|gb|AAV63857.1| hypothetical protein At1g64065 [Arabidopsis thaliana] gi|332196066|gb|AEE34187.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 127/217 (58%), Gaps = 9/217 (4%)

Query: 1   MAEENPKIPLAPPRNEYPRSDQEYAPAVIESQRKS---SKCLVYVLVTIVTVSAALLISA 57
           M +E+ +I LAP    Y RSD+E +   I  ++      KCLVY L  IV + A  LI +
Sbjct: 1   MVDED-RITLAPT-EIYGRSDEEQSGPRIWRRKTEEPPGKCLVYSLTIIVIIFALCLILS 58

Query: 58  SIFLRPNTPEVQLESVTVKNL-SHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVF 116
           SIFLR + PE++  S++ ++L S GN T+P FN TLV++++I N N+G FE+++ +  V 
Sbjct: 59  SIFLRISKPEIETRSISTRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVV 118

Query: 117 YGS-VTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAK 175
           Y     VG+ KI   RVEA +  RI   V V++ S   LD ++L  D+  G ++L S A+
Sbjct: 119 YADHGVVGETKIEGRRVEAHKTVRITGVV-VEIGSFRLLDTKDLDKDLRLGFLELRSVAE 177

Query: 176 LHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
           + G + +    K+ K   + C+M L L  R +++L+C
Sbjct: 178 VRGRIKVLG-RKRWKVSVMSCTMRLNLTGRFIQNLLC 213

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297840081|ref|XP_002887922.1| hypothetical protein ARALYDRAFT_474948 [Arabidopsis lyrata subsp. lyrata] gi|297333763|gb|EFH64181.1| hypothetical protein ARALYDRAFT_474948 [Arabidopsis lyrata subsp. lyrata]

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 127/217 (58%), Gaps = 9/217 (4%)

Query: 1   MAEENPKIPLAPPRNEYPRSDQEYAPAVIESQRKS---SKCLVYVLVTIVTVSAALLISA 57
           M EE+ +I LAP    Y RSD+E +   I  ++      KCLVY L  IV + A  LI +
Sbjct: 1   MVEED-RITLAPT-AIYGRSDEEQSGPRIWRRKTEEPPGKCLVYSLTIIVIIFALCLILS 58

Query: 58  SIFLRPNTPEVQLESVTVKNLSH-GNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVF 116
           SIFLR + PE++  S++ ++L   GN T+P FN TLV++++I N N+G FE+++ S  V 
Sbjct: 59  SIFLRISKPEIETRSISTRDLRFGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSSLRVV 118

Query: 117 YGSV-TVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAK 175
           Y     VG+ KI   RVEA +  RI   V V++ S   L+ ++L SD+  G ++L S A+
Sbjct: 119 YADHGVVGETKIAGRRVEAHKTVRITDVV-VEIGSFRLLNTKDLDSDLRLGFLELRSVAE 177

Query: 176 LHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
           + G + +    ++ K   + C+M L L  R +++L+C
Sbjct: 178 VRGRIKVLG-RRRWKVSVMSCTMRLNLTGRFIQNLLC 213

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357481529|ref|XP_003611050.1| hypothetical protein MTR_5g009910 [Medicago truncatula] gi|355512385|gb|AES94008.1| hypothetical protein MTR_5g009910 [Medicago truncatula]

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 104/191 (54%), Gaps = 5/191 (2%)

Query: 24  YAPAVIESQRKSSKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNG 83
           Y P  +  +  S+KC VYV    V   A LLISASI LR   PE++L S T+  + + + 
Sbjct: 2   YQP--VRKEPSSNKCFVYVFAAFVFCCAILLISASI-LRIKKPELKLTSTTLNGIGYNDV 58

Query: 84  T-SPSFNVTLVTELTIDNENYG-YFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRIN 141
           + SP FN T++T  +I N NYG  F Y+  +  V Y  V VG  KI + +V  R+ K IN
Sbjct: 59  SPSPFFNATIITYFSIWNPNYGGIFSYEYSNIKVLYSGVKVGVTKIPNDKVSQRKTKHIN 118

Query: 142 VTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLV 201
           VTVDV+        N+   SDI SG++ L SY K  G V L  +  K KT E+ C MNL 
Sbjct: 119 VTVDVNFLKLIVNGNEKFSSDIGSGMLNLTSYVKFSGIVQLMKIFHKRKTLEMACIMNLN 178

Query: 202 LARRAVEDLVC 212
               A++ + C
Sbjct: 179 FTSHAIQGIHC 189

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147843842|emb|CAN79447.1| hypothetical protein VITISV_037464 [Vitis vinifera]

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 109/182 (59%), Gaps = 7/182 (3%)

Query: 32  QRKSSKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVT 91
           ++KS KCL YV   +V  +  +L+   + L+   P+V++ S++V+N    + ++ SF++ 
Sbjct: 10  RKKSLKCLAYVAAFVVFQTGIILLFVLLVLKIRDPKVRIASISVEN---QHFSTNSFSMD 66

Query: 92  LVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSN 151
           L   +T+ N N+G+F++ N + ++ Y    VG+  I   R  +R  KR N+TV +   S+
Sbjct: 67  LKARVTVKNTNFGHFKFDNSTATISYFGTAVGEATILKARARSRSTKRFNITVPI---SS 123

Query: 152 GNLDN-QNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDL 210
             ++N + LR D+NSG++ L+S AKL G + LF + KK K+ E+ C+M L     ++E+L
Sbjct: 124 SKVNNHRQLRRDLNSGVLNLSSTAKLSGKIHLFKIFKKKKSAEMSCTMELHTNTSSIENL 183

Query: 211 VC 212
            C
Sbjct: 184 SC 185

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6692110|gb|AAF24575.1|AC007764_17 F22C12.17 [Arabidopsis thaliana]

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/188 (38%), Positives = 112/188 (59%), Gaps = 8/188 (4%)

Query: 1   MAEENPKIPLAPPRNEYPRSDQEYAPAVI---ESQRKSSKCLVYVLVTIVTVSAALLISA 57
           M +E+ +I LAP    Y RSD+E +   I   +++    KCLVY L  IV + A  LI +
Sbjct: 1   MVDED-RITLAPT-EIYGRSDEEQSGPRIWRRKTEEPPGKCLVYSLTIIVIIFALCLILS 58

Query: 58  SIFLRPNTPEVQLESVTVKNL-SHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVF 116
           SIFLR + PE++  S++ ++L S GN T+P FN TLV++++I N N+G FE+++ +  V 
Sbjct: 59  SIFLRISKPEIETRSISTRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVV 118

Query: 117 YGSV-TVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAK 175
           Y     VG+ KI   RVEA +  RI   V V++ S   LD ++L  D+  G ++L S A+
Sbjct: 119 YADHGVVGETKIEGRRVEAHKTVRITGVV-VEIGSFRLLDTKDLDKDLRLGFLELRSVAE 177

Query: 176 LHGNVSLF 183
           + G + + 
Sbjct: 178 VRGRIKVL 185

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143750|emb|CBI22611.3| unnamed protein product [Vitis vinifera]

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 106/182 (58%), Gaps = 3/182 (1%)

Query: 32  QRKSSKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSH-GNGTSPSFNV 90
           + K ++ + Y+    +  +  +++     +R  +P+ +  +V+++NL++  + TSPSFN+
Sbjct: 117 RMKCTRYIAYLSAFALFETIVIMVCVVTLMRIRSPKFRFRAVSIENLNYTSDTTSPSFNI 176

Query: 91  TLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRS 150
               ++ + N N+G+F++KN + ++ Y    VGD KI   R  AR  K++NVTVDV   +
Sbjct: 177 RFNAKVAVKNTNFGHFKFKNSTITLAYRGDHVGDAKISKARARARSTKKMNVTVDVTSNN 236

Query: 151 NGNLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDL 210
                N NL SDINSG + L    KL+G V L  V KK K+P+++C++ + L  + +++ 
Sbjct: 237 VS--SNSNLASDINSGFLTLTGQGKLNGKVHLMKVFKKKKSPQMNCTIKINLENKVIQEW 294

Query: 211 VC 212
            C
Sbjct: 295 KC 296

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545130|ref|XP_002513626.1| conserved hypothetical protein [Ricinus communis] gi|223547534|gb|EEF49029.1| conserved hypothetical protein [Ricinus communis]

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 116/220 (52%), Gaps = 12/220 (5%)

Query: 1   MAE-ENPKIPLAPPRNEYPRSDQEYAPAVIES-----QRKSSKCLVYVLVTIVTVSAALL 54
           MAE E    PL    +   RSD+E   A         ++K  KC+ +V+   +  +  +L
Sbjct: 1   MAEKEQAPTPLVA--DGQTRSDEESGTAGTAQTKELRKKKRMKCIAFVVAFTIFQTGIIL 58

Query: 55  ISASIFLRPNTPEVQLESVTVKNLSH--GNGTSPSFNVTLVTELTIDNENYGYFEYKNCS 112
           +     LR   P+ ++ S +  +  H   +  +PSFN+T+ T+  + N N+G+F+Y+  +
Sbjct: 59  LFVFTVLRFKDPKFRVRSASFDDTFHVGTDAAAPSFNLTMNTQFGVKNTNFGHFKYETST 118

Query: 113 GSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNS 172
            +  Y    VG V +   R  AR  ++ +  V +  R++   D   L SDI+SG + L+S
Sbjct: 119 VTFEYRGTVVGLVNVDKARARARSTRKFDAIVVL--RTDRLPDGFELSSDISSGKIPLSS 176

Query: 173 YAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
            ++L G + L  V+KK K+ E++C+MN+ +  R ++D+VC
Sbjct: 177 SSRLDGEIHLMKVIKKKKSAEMNCTMNVDIQTRTLQDIVC 216

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225454320|ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258567 [Vitis vinifera] gi|147832282|emb|CAN73280.1| hypothetical protein VITISV_040609 [Vitis vinifera] gi|297745338|emb|CBI40418.3| unnamed protein product [Vitis vinifera]

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 116/216 (53%), Gaps = 6/216 (2%)

Query: 1   MAEENPKIPLAPPRNEYPRSDQEYAPAVIE-SQRKSSKCLVYVLVTIVTVSAALLISASI 59
           M E     PLAP  +     D +    +    +R+  KC   +  TI+  +A ++I    
Sbjct: 1   MVEREQVRPLAPASHRLSSEDDKVTNHLSRLRRRRCIKCWGCIAATILIQAAVVIILVFT 60

Query: 60  FLRPNTPEVQLESVTVKNLSHGNGTS---PSFNVTLVTELTIDNENYGYFEYKNCSGSVF 116
             R   P ++L   TV  L   NGT+   P  N++L  ++++ N N+  F YKN + ++F
Sbjct: 61  VFRVKDPVIKLNGFTVDKLELINGTTTPGPGVNMSLTADVSVKNPNFASFRYKNTTTTLF 120

Query: 117 YGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKL 176
           Y    +G+ +   G+ +AR   ++NVT+++ + S   + N +L +DI+SGI+ +N+Y+++
Sbjct: 121 YSGTVIGEARGPPGQAKARRTMKMNVTIEIILDS--LMSNPSLLTDISSGILPMNTYSRV 178

Query: 177 HGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
            G V +  ++KK    +++CS+ + +  R++++  C
Sbjct: 179 PGRVKMLKIIKKHVVVKMNCSVTVNITSRSIQEQKC 214

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	214
TAIR|locus:1006230721	214	AT1G64065 "AT1G64065" [Arabido	0.971	0.971	0.373	7.9e-30
TAIR|locus:2062917	221	AT2G46150 "AT2G46150" [Arabido	0.971	0.941	0.264	2.2e-18
TAIR|locus:2051774	209	AT2G44000 "AT2G44000" [Arabido	0.808	0.827	0.311	1.1e-16
TAIR|locus:2080320	235	AT3G54200 "AT3G54200" [Arabido	0.971	0.885	0.224	8.8e-15
TAIR|locus:2128464	228	AT4G23610 "AT4G23610" [Arabido	0.911	0.855	0.244	3.1e-12
TAIR|locus:504955821	189	AT3G05975 "AT3G05975" [Arabido	0.799	0.904	0.255	6.6e-10
TAIR|locus:2142040	215	AT4G13270 "AT4G13270" [Arabido	0.803	0.8	0.202	6.1e-06
TAIR|locus:2138136	187	AT4G23930 "AT4G23930" [Arabido	0.733	0.839	0.239	7.1e-06
TAIR|locus:2018154	227	AT1G52330 "AT1G52330" [Arabido	0.808	0.762	0.241	0.00018
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.845	0.696	0.248	0.0006

TAIR|locus:1006230721 AT1G64065 "AT1G64065" [Arabidopsis thaliana (taxid:3702)]

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 81/217 (37%), Positives = 129/217 (59%)

Query:     1 MAEENPKIPLAPPRNEYPRSDQEYA-PAVI--ESQRKSSKCLVYVLVTIVTVSAALLISA 57
             M +E+ +I LAP    Y RSD+E + P +   +++    KCLVY L  IV + A  LI +
Sbjct:     1 MVDED-RITLAPTEI-YGRSDEEQSGPRIWRRKTEEPPGKCLVYSLTIIVIIFALCLILS 58

Query:    58 SIFLRPNTPEVQLESVTVKNL-SHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVF 116
             SIFLR + PE++  S++ ++L S GN T+P FN TLV++++I N N+G FE+++ +  V 
Sbjct:    59 SIFLRISKPEIETRSISTRDLRSGGNSTNPYFNATLVSDISIRNSNFGAFEFEDSTLRVV 118

Query:   117 YGSV-TVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAK 175
             Y     VG+ KI   RVEA +  RI   V V++ S   LD ++L  D+  G ++L S A+
Sbjct:   119 YADHGVVGETKIEGRRVEAHKTVRITGVV-VEIGSFRLLDTKDLDKDLRLGFLELRSVAE 177

Query:   176 LHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
             + G + +    K+ K   + C+M L L  R +++L+C
Sbjct:   178 VRGRIKVLG-RKRWKVSVMSCTMRLNLTGRFIQNLLC 213

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

TAIR|locus:2062917 AT2G46150 "AT2G46150" [Arabidopsis thaliana (taxid:3702)]

 Score = 222 (83.2 bits), Expect = 2.2e-18, P = 2.2e-18
 Identities = 58/219 (26%), Positives = 109/219 (49%)

Query:     1 MAEENPKIPLAPPRNEYPRSDQEYAPAVIESQRKSS--KCLVYVLVTIVTVSAALLISAS 58
             MA+     PLAP     P SD E A  +  + R  +  KC + V  T + ++  +L    
Sbjct:     1 MADSEHVRPLAPA-TILPVSD-ESASNIKNTHRSRNRIKCSICVTATSLILTTIVLTLVF 58

Query:    59 IFLRPNTPEVQLESVTVKNLSHGNGTSP----SFNVTLVTELTIDNENYGYFEYKNCSGS 114
                R   P +++  V V  L    GT+       N++++ ++++ N N   F+Y N +  
Sbjct:    59 TVFRVKDPIIKMNGVMVNGLDSVTGTNQVQLLGTNISMIVDVSVKNPNTASFKYSNTTTD 118

Query:   115 VFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDIN-SGIVKLNSY 173
             ++Y    VG+     G+       R+NVTVD+ +  +  L +  L  +I+ SG+V + SY
Sbjct:   119 IYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIML--DRILSDPGLGREISRSGLVNVWSY 176

Query:   174 AKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
              ++ G V +  ++KK  T +++C+M + +  +A++D+ C
Sbjct:   177 TRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQDVDC 215

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2051774 AT2G44000 "AT2G44000" [Arabidopsis thaliana (taxid:3702)]

 Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 57/183 (31%), Positives = 91/183 (49%)

Query:    35 SSKCLVYVLVTIVTVSAALLISASIFL-RPNTPEVQLESVTVKNLSHGNGTSPS----FN 89
             + K ++++L  +  +    ++    F+ +P T    L SV V+NL + N TS S    FN
Sbjct:    31 TGKIIIFILAGLCMLLFIFIVIGFFFIAKPLT--ASLTSVEVRNLRYNNNTSSSSSLYFN 88

Query:    90 VTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVR 149
              TL  E+ I+N N G+FE+    G + Y    VG+++I   RV +    R  V+ +V  R
Sbjct:    89 ATLAMEIRIENPNLGFFEFPTSRGEILYNGDVVGEMRINGQRVASFGDLRTEVSAEVAYR 148

Query:   150 SNGNLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVED 209
              N       L++DI   ++ L + AKL G V L ++ K+T    L C M L L+   +  
Sbjct:   149 GNQKSPVW-LKNDIERRLIILETRAKLRGEVHLKDLNKRTVN--LKCLMQLNLSDDVIHR 205

Query:   210 LVC 212
             L C
Sbjct:   206 LWC 208

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2080320 AT3G54200 "AT3G54200" [Arabidopsis thaliana (taxid:3702)]

 Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
 Identities = 49/218 (22%), Positives = 98/218 (44%)

Query:     3 EENPKIPLAPPRNEYPRSDQEYAPAV-----IESQRKSSKCLVYVLVTIVTVSAALLISA 57
             EE P   + PP      S +  +        +  +R    C+ + ++ I+ ++  ++I A
Sbjct:    14 EEKPATAMLPPPKPNASSMETQSANTGTAKKLRRKRNCKICICFTILLILLIAIVIVILA 73

Query:    58 SIFLRPNTPEVQLESVTVKNLSHGNGT---SPSFNVTLVTELTIDNENYGYFEYKNCSGS 114
                 +P  P   ++SVTV  L             N+TL  +L++ N N   F Y + S  
Sbjct:    74 FTLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSAL 133

Query:   115 VFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYA 174
             + Y    +G+  +   R+ AR+   +N+T+ +   ++  L    L SD+ +G++ LN++ 
Sbjct:   134 LNYRGQVIGEAPLPANRIAARKTVPLNITLTL--MADRLLSETQLLSDVMAGVIPLNTFV 191

Query:   175 KLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
             K+ G V++  + K        C +++ ++ R V    C
Sbjct:   192 KVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHC 229

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0046658 "anchored to plasma membrane" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2128464 AT4G23610 "AT4G23610" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 51/209 (24%), Positives = 101/209 (48%)

Query:     3 EENPKIPLAP----PRNEYPRSDQEY---APAVIESQRKSSKCLVYVL-VTIVTVSAALL 54
             E+  K PLAP     R++ P  + +Y       + SQ K   C  ++  +T++     ++
Sbjct:    10 EDQAK-PLAPLFLTTRSDQPDEEDQYHHDRTKYVHSQTKLILCCGFIASLTMLIAVTFIV 68

Query:    55 ISASIFLRPNTPEVQLESVTV-KNLSHGNG-TSPSFNVTLVTELTIDNENYGYFEYKNCS 112
             +S ++F   ++P + ++S++  +     NG  + + N T+  E+++ N N   F  KN +
Sbjct:    69 LSLTVF-HLHSPNLTVDSISFNQRFDFVNGKVNTNQNTTVSVEISLHNPNPALFIVKNVN 127

Query:   113 GSVFYGS-VTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLN 171
              S ++G  V VG+   R   + A+   ++N+T ++ V++        L  D+N   V L 
Sbjct:   128 VSFYHGELVVVGESIRRSETIPAKRTVKMNLTAEI-VKTKLLASLPGLMEDLNGRGVDLK 186

Query:   172 SYAKLHGNVSLFNVLKKTKTPELDCSMNL 200
             S  ++ G V    + +KT   + DC M +
Sbjct:   187 SSVEVRGRVKKMKIFRKTVHLQTDCFMKM 215

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:504955821 AT3G05975 "AT3G05975" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
 Identities = 46/180 (25%), Positives = 81/180 (45%)

Query:    38 CLVY-VLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSP---SFNVTLV 93
             C+V  ++  +  +    LI A +F +P  P +Q  S TV  +S  N + P     N TL 
Sbjct:     8 CIVSGIIFVLFVIFMTALILAQVF-KPKHPILQTVSSTVDGIST-NISLPYEVQLNFTLT 65

Query:    94 TELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDV-RSNG 152
              E+ + N N   FEYK     V+Y    VG++ +    + A+    +   + + + +   
Sbjct:    66 LEMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLDKFVA 125

Query:   153 NLDNQNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
             NL +  +  D+  G + + + AK+ G ++L  + K        C++ L      VED VC
Sbjct:   126 NLGD--IVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQVC 183

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2142040 AT4G13270 "AT4G13270" [Arabidopsis thaliana (taxid:3702)]

 Score = 122 (48.0 bits), Expect = 6.1e-06, P = 6.1e-06
 Identities = 36/178 (20%), Positives = 89/178 (50%)

Query:    13 PRNEYPRSDQEYAPAVIESQRKSSK--CLVYVLVTIVTVSAALLISASIFLR-PNTPEVQ 69
             P    P S    +  ++   R+  +   L  +  +++  +  LL+SA+++L  P+ P++ 
Sbjct:    12 PYTPLPSSQPSQSVILLTPYRRHRRPSLLRNLRCSLLFTAVILLLSAAVYLLYPSDPDIT 71

Query:    70 LESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRD 129
             +  + + ++S  +    + +++    + + N ++   +Y +   S+ Y    +G VK + 
Sbjct:    72 VSRINLNHISVVDSHKIALDLSFSLTIKVRNRDFFSLDYDSLVVSIGYRGRELGLVKSKG 131

Query:   130 GRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKLHGN--VSLFNV 185
             G ++AR+   I+ T+++D     + D   L  D+  G++  ++ A++ G+  V LFN+
Sbjct:   132 GHLKARDSSYIDATLELDGLEVVH-DVIYLIGDLAKGVIPFDTIAQVQGDLGVLLFNI 188

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0000902 "cell morphogenesis" evidence=RCA

GO:0016049 "cell growth" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2138136 AT4G23930 "AT4G23930" [Arabidopsis thaliana (taxid:3702)]

 Score = 119 (46.9 bits), Expect = 7.1e-06, P = 7.1e-06
 Identities = 40/167 (23%), Positives = 72/167 (43%)

Query:    36 SKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTE 95
             + C V  L  +  + AAL +  ++F RP  PE+ + SV V + S  N +S SF  +  + 
Sbjct:     9 ASCAVATLFIVFLIIAALTVYLTVF-RPRDPEISVTSVKVPSFSVAN-SSVSFTFSQFS- 65

Query:    96 LTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVD-----VRS 150
               + N N   F + N    +FY    +G   +  G +E+   KR+  T  V        S
Sbjct:    66 -AVRNPNRAAFSHYNNVIQLFYYGNRIGYTFVPAGEIESGRTKRMLATFSVQSFPLAAAS 124

Query:   151 NGNLDNQNLRSDINSG-IVKLNSYAKLHGNVSLFNVLKKTKTPELDC 196
             +  +     ++   SG  V++ S  ++ G V +  +       + +C
Sbjct:   125 SSQISAAQFQNSDRSGSTVEIESKLEMAGRVRVLGLFTHRIAAKCNC 171

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2018154 AT1G52330 "AT1G52330" [Arabidopsis thaliana (taxid:3702)]

 Score = 111 (44.1 bits), Expect = 0.00018, P = 0.00018
 Identities = 45/186 (24%), Positives = 85/186 (45%)

Query:     3 EENPKI-PLAPPRNEYPRSDQ-EYAPAVIESQRKSSKCLVYVLVTIVTVS-AALLISASI 59
             EE+PK  P  P     P S   E   AV+ S   S       +++I  +S A++LI   I
Sbjct:     4 EEDPKATPSLPDYKPLPSSSSHELNDAVLISSHPSPPSRRRFIISIFLISFASILIY--I 61

Query:    60 FLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGS 119
             F  P+ P +++  V + ++       PS ++TL+  L + N +   F++ +   ++ Y  
Sbjct:    62 FW-PSDPRIKIIRVKISHVHVHRRPVPSIDMTLLVTLKVSNADVYSFDFTDLDVTIDYRG 120

Query:   120 VTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNL---DNQNLRSDINSGIVKLNSYAKL 176
              T+G V    G V A     ++   ++D    G +   D  +L  D+  G V+ ++  + 
Sbjct:   121 KTLGHVSSDGGHVTAFGSSYLDAEAELD----GVMVFPDVIHLIHDLAKGSVEFDTVTET 176

Query:   177 HGNVSL 182
             +G + +
Sbjct:   177 NGKLGV 182

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 108 (43.1 bits), Expect = 0.00060, P = 0.00060
 Identities = 51/205 (24%), Positives = 85/205 (41%)

Query:     7 KIPLAPPRNEYPRSDQEYAPAVIESQRKSSKC----LVYVLVTIVTVSAALLISASIFLR 62
             +IP  PP N + R +Q        S  +   C     V++L+ +  +S A+L    +  R
Sbjct:    48 RIP--PPENAH-RFEQLSRKKTNRSNCRCCFCSFLAAVFILIVLAGISFAVLY---LIYR 101

Query:    63 PNTPEVQLESVTVK--NLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSV 120
             P  P+  +E  +V   NL+  +  SPSFNVT+ +     N   G +  K  S  V+Y   
Sbjct:   102 PEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRN--GNGKIGVYYEKESSVDVYYN-- 157

Query:   121 TVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLD-----NQNLRSDINSGIVKLNSYAK 175
                DV I +G +        NVTV   V S   +       + +R++++   V      K
Sbjct:   158 ---DVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIK 214

Query:   176 LHGNVSLFNVLKKTKTPELDCSMNL 200
                 +   +V   T    +DC + +
Sbjct:   215 APVKIKFGSVKTWTMIVNVDCDVTV 239


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.314   0.131   0.363    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      214       214   0.00085  112 3  11 23  0.42    33
                                                     31  0.49    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  564 (60 KB)
  Total size of DFA:  147 KB (2090 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.53u 0.10s 20.63t   Elapsed:  00:00:01
  Total cpu time:  20.54u 0.10s 20.64t   Elapsed:  00:00:01
  Start:  Tue May 21 04:46:12 2013   End:  Tue May 21 04:46:13 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	214
PLN03160	219	PLN03160, PLN03160, uncharacterized protein; Provi	1e-28

>gnl|CDD|215609 PLN03160, PLN03160, uncharacterized protein; Provisional

 Score =  106 bits (267), Expect = 1e-28
 Identities = 64/216 (29%), Positives = 115/216 (53%), Gaps = 7/216 (3%)

Query: 1   MAEENPKIPLAPPRNEYPRSDQEYAPAVIES--QRKSSKCLVYVLVTIVTVSAALLISAS 58
           MAE     PLAP      RSD+E A   ++   +R   KC   +  T++ ++  +L+   
Sbjct: 1   MAETEQVRPLAPA-AFRLRSDEEEATNHLKKTRRRNCIKCCGCITATLLILATTILVLVF 59

Query: 59  IFLRPNTPEVQLESVTVKNLSHGNGTS--PSFNVTLVTELTIDNENYGYFEYKNCSGSVF 116
              R   P +++  VTV  L   N T+  P  N+TL+ ++++ N N   F+Y N + +++
Sbjct: 60  TVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNVASFKYSNTTTTIY 119

Query: 117 YGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSYAKL 176
           YG   VG+ +   G+ +AR   R+NVTVD+       L    L +DI+SG++ +NSY ++
Sbjct: 120 YGGTVVGEARTPPGKAKARRTMRMNVTVDIIPDK--ILSVPGLLTDISSGLLNMNSYTRI 177

Query: 177 HGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVC 212
            G V +  ++KK    +++C+M + +  +A++   C
Sbjct: 178 GGKVKILKIIKKHVVVKMNCTMTVNITSQAIQGQKC 213

Length = 219

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	214
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.49
smart00769	100	WHy Water Stress and Hypersensitive response.	98.93
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	98.51
COG5608	161	LEA14-like dessication related protein [Defense me	97.93
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.36
PF14155	112	DUF4307: Domain of unknown function (DUF4307)	90.33
PLN03160	219	uncharacterized protein; Provisional	89.53
PRK12785	166	fliL flagellar basal body-associated protein FliL;	83.91
PF14927	140	Neurensin: Neurensin	83.08
PF06072	60	Herpes_US9: Alphaherpesvirus tegument protein US9;	82.31

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=1.9e-56  Score=374.43  Aligned_cols=211  Identities=30%  Similarity=0.564  Sum_probs=196.7

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCcCCCccccc--ccCceeEEehhHHHHHHHHHHHHHhheeeeeecCCCeEEEEEEEEeeE
Q 045946            1 MAEENPKIPLAPPRNEYPRSDQEYAPAVIE--SQRKSSKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNL   78 (214)
Q Consensus         1 ~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~--~~r~~~~c~~~~l~~~vll~ii~lil~~~v~rPk~P~~~V~s~~l~~~   78 (214)
                      |||+||+|||||+ ..+++||||++..+.+  +||+|++||+|+++++++|++++++++|++||||+|+|+|+++++++|
T Consensus         1 ~~~~~~~~p~a~~-~~~~~~d~~~~~~~~~~~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~   79 (219)
T PLN03160          1 MAETEQVRPLAPA-AFRLRSDEEEATNHLKKTRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKL   79 (219)
T ss_pred             CCccccCCCCCCC-cccccCchhhcCcchhccccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeee
Confidence            9999999999999 9999999998876654  777788899999988888888888888999999999999999999999


Q ss_pred             EeCCC--CCCeEEEEEEEEEEEECCCceeEEEeceEEEEEECCEEEEeEEecCceeecccEEEEEEEEEEeeecccccCC
Q 045946           79 SHGNG--TSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRDGRVEAREVKRINVTVDVDVRSNGNLDN  156 (214)
Q Consensus        79 ~~~~~--~~~~ln~tl~~~v~~~NPN~~~~~y~~~~~~v~Y~g~~ig~~~vp~~~~~~~~t~~~~~~~~~~~~~~~l~~~  156 (214)
                      +++++  +.+.+|+||+++|+++|||+++|+|+++++.++|+|+.+|++.+|+|+|++|+|+.+++++.  +.++++.++
T Consensus        80 ~~~~~~~~~~~~n~tl~~~v~v~NPN~~~~~Y~~~~~~v~Y~g~~vG~a~~p~g~~~ar~T~~l~~tv~--~~~~~~~~~  157 (219)
T PLN03160         80 ELINNTTLRPGTNITLIADVSVKNPNVASFKYSNTTTTIYYGGTVVGEARTPPGKAKARRTMRMNVTVD--IIPDKILSV  157 (219)
T ss_pred             eeccCCCCceeEEEEEEEEEEEECCCceeEEEcCeEEEEEECCEEEEEEEcCCcccCCCCeEEEEEEEE--EEeceeccc
Confidence            99753  35689999999999999999999999999999999999999999999999999999999988  888887777


Q ss_pred             ccchhhhcCCeEEEEEEEEEEEEEEEEEEeeeceeEEEEeEEEEEcCCCeEEecccCC
Q 045946          157 QNLRSDINSGIVKLNSYAKLHGNVSLFNVLKKTKTPELDCSMNLVLARRAVEDLVCSS  214 (214)
Q Consensus       157 ~~l~~D~~~G~v~l~~~~~v~grv~v~~~~~~~~~~~v~C~v~v~~~~~~i~~~~C~~  214 (214)
                      ++|.+|+++|.++|+++++++|||++++++++|++++++|++.|+.+++++++++|+.
T Consensus       158 ~~L~~D~~~G~v~l~~~~~v~gkVkv~~i~k~~v~~~v~C~v~V~~~~~~i~~~~C~~  215 (219)
T PLN03160        158 PGLLTDISSGLLNMNSYTRIGGKVKILKIIKKHVVVKMNCTMTVNITSQAIQGQKCKR  215 (219)
T ss_pred             hhHHHHhhCCeEEEEEEEEEEEEEEEEEEEEEEEEEEEEeEEEEECCCCEEeccEecc
Confidence            8999999999999999999999999999999999999999999999999999999974

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.49  E-value=1.5e-13  Score=100.43  Aligned_cols=98  Identities=18%  Similarity=0.258  Sum_probs=73.5

Q ss_pred             EEEEECCCceeEEEeceEEEEEECCEEEE-eEEecCceeecccEEEEEEEEEEeeecccccCCccchhhhcCCeEEEEEE
Q 045946           95 ELTIDNENYGYFEYKNCSGSVFYGSVTVG-DVKIRDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSGIVKLNSY  173 (214)
Q Consensus        95 ~v~~~NPN~~~~~y~~~~~~v~Y~g~~ig-~~~vp~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~l~~D~~~G~v~l~~~  173 (214)
                      +++++|||.++++|++.++.++|+|+.+| ....++++|++++++.+.+++.  +....+  ...+.++. .|..++++.
T Consensus         1 ~l~v~NPN~~~i~~~~~~~~v~~~g~~v~~~~~~~~~~i~~~~~~~v~~~v~--~~~~~l--~~~l~~~~-~~~~~~~v~   75 (101)
T PF03168_consen    1 TLSVRNPNSFGIRYDSIEYDVYYNGQRVGTGGSLPPFTIPARSSTTVPVPVS--VDYSDL--PRLLKDLL-AGRVPFDVT   75 (101)
T ss_dssp             EEEEEESSSS-EEEEEEEEEEEESSSEEEEEEECE-EEESSSCEEEEEEEEE--EEHHHH--HHHHHHHH-HTTSCEEEE
T ss_pred             CEEEECCCceeEEEeCEEEEEEECCEEEECccccCCeEECCCCcEEEEEEEE--EcHHHH--HHHHHhhh-ccccceEEE
Confidence            46899999999999999999999999999 7788999999999999888877  544333  13344445 667777888


Q ss_pred             EEEEEEEEE-EEEeeeceeEEEEeE
Q 045946          174 AKLHGNVSL-FNVLKKTKTPELDCS  197 (214)
Q Consensus       174 ~~v~grv~v-~~~~~~~~~~~v~C~  197 (214)
                      .+++|++++ +..+.+++++.++|+
T Consensus        76 ~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   76 YRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEEcccceeeeEEEeEEeE
Confidence            889999995 444445566666664

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.93  E-value=1.7e-08  Score=74.49  Aligned_cols=80  Identities=18%  Similarity=0.219  Sum_probs=66.3

Q ss_pred             CeEEEEEEEEEEEECCCceeEEEeceEEEEEECCEEEEeEEec-CceeecccEEEEEEEEEEeeecccccCCccchhhhc
Q 045946           86 PSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIR-DGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDIN  164 (214)
Q Consensus        86 ~~ln~tl~~~v~~~NPN~~~~~y~~~~~~v~Y~g~~ig~~~vp-~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~l~~D~~  164 (214)
                      ..++.++.+.+++.|||.+.+.|++.+..++|+|..+|++..+ ++.+++++++.+.+++.  + ...  ....+..++.
T Consensus        11 ~~~~~~~~l~l~v~NPN~~~l~~~~~~y~l~~~g~~v~~g~~~~~~~ipa~~~~~v~v~~~--~-~~~--~~~~~~~~l~   85 (100)
T smart00769       11 SGLEIEIVLKVKVQNPNPFPIPVNGLSYDLYLNGVELGSGEIPDSGTLPGNGRTVLDVPVT--V-NLF--LAEALIWHIA   85 (100)
T ss_pred             cceEEEEEEEEEEECCCCCccccccEEEEEEECCEEEEEEEcCCCcEECCCCcEEEEEEEE--e-ehh--HhHHHHHhhc
Confidence            3678999999999999999999999999999999999999996 79999999999998887  5 221  2256777777


Q ss_pred             CCe-EEE
Q 045946          165 SGI-VKL  170 (214)
Q Consensus       165 ~G~-v~l  170 (214)
                      +|. ++.
T Consensus        86 ~~~~~~y   92 (100)
T smart00769       86 NGEEIPY   92 (100)
T ss_pred             cCCCccE
Confidence            664 443

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=98.51  E-value=3.9e-06  Score=70.82  Aligned_cols=95  Identities=23%  Similarity=0.264  Sum_probs=69.5

Q ss_pred             HHHHHHHhheeeeeecCCCeEEEEEEEEeeEEeCCCCCCeEEEEEEEEEEEECCCceeEEEeceEEEEEECCEEEEeEEe
Q 045946           48 TVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKI  127 (214)
Q Consensus        48 ll~ii~lil~~~v~rPk~P~~~V~s~~l~~~~~~~~~~~~ln~tl~~~v~~~NPN~~~~~y~~~~~~v~Y~g~~ig~~~v  127 (214)
                      -+.+..|+++|++  ||.-.++-.++......++.. ......++.-.+.+.|||++.+.-.+.++++.|....+|.+..
T Consensus        85 CLl~~~L~iFFLf--PRsV~v~~~gv~s~~V~f~~~-~~~v~l~itn~lNIsN~NFy~V~Vt~~s~qv~~~~~VVG~~~~  161 (238)
T PF07092_consen   85 CLLLSGLVIFFLF--PRSVTVSPVGVKSVTVSFNPD-KSTVQLNITNTLNISNPNFYPVTVTNLSIQVLYMKTVVGKGKN  161 (238)
T ss_pred             HHHHHHheEEEEe--CcEEEEecCcEEEEEEEEeCC-CCEEEEEEEEEEEccCCCEEEEEEEeEEEEEEEEEeEEeeeEe
Confidence            3334445545444  887666655555555555543 2356667777899999999999999999999999999999988


Q ss_pred             cCc-eeecccEEEEEEEEE
Q 045946          128 RDG-RVEAREVKRINVTVD  145 (214)
Q Consensus       128 p~~-~~~~~~t~~~~~~~~  145 (214)
                      ... .+++++...+.+++.
T Consensus       162 ~~~~~I~Prs~~q~~~tV~  180 (238)
T PF07092_consen  162 SNITVIGPRSSKQVNYTVK  180 (238)
T ss_pred             cceEEecccCCceEEEEee
Confidence            754 788888877777665

The function of this family is unknown.

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.93  E-value=0.00096  Score=52.64  Aligned_cols=111  Identities=14%  Similarity=0.193  Sum_probs=79.2

Q ss_pred             cCCCeEEEEEEEEeeEEeCCCCCCeEEEEEEEEEEEECCCceeEEEeceEEEEEECCEEEEeEEe-cCceeecccEEEEE
Q 045946           63 PNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKI-RDGRVEAREVKRIN  141 (214)
Q Consensus        63 Pk~P~~~V~s~~l~~~~~~~~~~~~ln~tl~~~v~~~NPN~~~~~y~~~~~~v~Y~g~~ig~~~v-p~~~~~~~~t~~~~  141 (214)
                      -++|.+.--.+..-...       .....+..++.++|||-+.+-..+.+..+|-+|.++|.+.. .++.+++++-..+.
T Consensus        30 ~~~p~ve~~ka~wGkvt-------~s~~EiV~t~KiyNPN~fPipVtgl~y~vymN~Iki~eG~~~k~~~v~p~S~~tvd  102 (161)
T COG5608          30 VKKPGVESMKAKWGKVT-------NSETEIVGTLKIYNPNPFPIPVTGLQYAVYMNDIKIGEGEILKGTTVPPNSRETVD  102 (161)
T ss_pred             cCCCCceEEEEEEEEEe-------ccceEEEEEEEecCCCCcceeeeceEEEEEEcceEeeccccccceEECCCCeEEEE
Confidence            45677766666665553       23456677789999999999999999999999999999976 46899999998888


Q ss_pred             EEEEEeeecccccCCccchhhhcCCeE-EEEEEEEEEEEEEEEEEe
Q 045946          142 VTVDVDVRSNGNLDNQNLRSDINSGIV-KLNSYAKLHGNVSLFNVL  186 (214)
Q Consensus       142 ~~~~~~~~~~~l~~~~~l~~D~~~G~v-~l~~~~~v~grv~v~~~~  186 (214)
                      +++.  +.-.++-  ....+.+++|+= +..  .++.+.+++++..
T Consensus       103 v~l~--~d~~~~k--e~w~~hi~ngErs~Ir--~~i~~~v~vg~~d  142 (161)
T COG5608         103 VPLR--LDNSKIK--EWWVTHIENGERSTIR--VRIKGVVKVGGMD  142 (161)
T ss_pred             EEEE--EehHHHH--HHHHHHhhccCcccEE--EEEEEEEEEccEE
Confidence            8877  4322211  345557777764 333  4566667766543

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.36  E-value=0.00067  Score=60.90  Aligned_cols=82  Identities=13%  Similarity=0.155  Sum_probs=51.3

Q ss_pred             eEEehhHHHHHHHHHHHHHhheeeeeecCCCeEEEEEEEEeeEEeCCCCCCeEEEEEEEEEEEECCCceeEEEeceEEEE
Q 045946           36 SKCLVYVLVTIVTVSAALLISASIFLRPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSV  115 (214)
Q Consensus        36 ~~c~~~~l~~~vll~ii~lil~~~v~rPk~P~~~V~s~~l~~~~~~~~~~~~ln~tl~~~v~~~NPN~~~~~y~~~~~~v  115 (214)
                      .++++|+++.+++|+++..++.| +|--.+|--.|+=+.|++.-.+     .-..=|+++|.+.|||.+.+.-++.++.+
T Consensus       300 ~r~~~c~~~~i~~lL~ig~~~gF-v~AttKpL~~v~v~~I~NVlaS-----~qELmfdl~V~A~NPn~~~V~I~d~dldI  373 (387)
T PF12751_consen  300 SRFASCIYLSILLLLVIGFAIGF-VFATTKPLTDVQVVSIQNVLAS-----EQELMFDLTVEAFNPNWFTVTIDDMDLDI  373 (387)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHh-hhhcCcccccceEEEeeeeeec-----cceEEEeeEEEEECCCeEEEEeccceeee
Confidence            34445555544444445555454 4445566544444445554322     23445677789999999999999999999


Q ss_pred             EECCEEEE
Q 045946          116 FYGSVTVG  123 (214)
Q Consensus       116 ~Y~g~~ig  123 (214)
                      +=+...+|
T Consensus       374 FAKS~yvg  381 (387)
T PF12751_consen  374 FAKSRYVG  381 (387)
T ss_pred             EecCCccC
Confidence            87766555

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PF14155 DUF4307: Domain of unknown function (DUF4307)

Probab=90.33  E-value=6.2  Score=29.58  Aligned_cols=68  Identities=21%  Similarity=0.238  Sum_probs=33.2

Q ss_pred             cCCCeEEEEEEEEeeEEeCCCCCCeEEEEEEEEEEEECCCc-eeEEEeceEEEEEECCEEEEeE--EecCceeecccEEE
Q 045946           63 PNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENY-GYFEYKNCSGSVFYGSVTVGDV--KIRDGRVEAREVKR  139 (214)
Q Consensus        63 Pk~P~~~V~s~~l~~~~~~~~~~~~ln~tl~~~v~~~NPN~-~~~~y~~~~~~v~Y~g~~ig~~--~vp~~~~~~~~t~~  139 (214)
                      ...|.++   .+..+|.+.+.  .+...+|+  ++-. |.. ..=.   + -.+.|++..+|.-  .+|+   +...+..
T Consensus        29 ~~~~~v~---~~~~gf~vv~d--~~v~v~f~--Vtr~-~~~~a~C~---V-rA~~~d~aeVGrreV~vp~---~~~~~~~   93 (112)
T PF14155_consen   29 FGSPPVS---AEVIGFEVVDD--STVEVTFD--VTRD-PGRPAVCI---V-RALDYDGAEVGRREVLVPP---SGERTVR   93 (112)
T ss_pred             ccCCCce---EEEEEEEECCC--CEEEEEEE--EEEC-CCCCEEEE---E-EEEeCCCCEEEEEEEEECC---CCCcEEE
Confidence            5566664   34455666542  34555444  3333 763 2211   1 1234777788854  4566   2344455


Q ss_pred             EEEEEE
Q 045946          140 INVTVD  145 (214)
Q Consensus       140 ~~~~~~  145 (214)
                      +.+++.
T Consensus        94 ~~v~v~   99 (112)
T PF14155_consen   94 VTVTVR   99 (112)
T ss_pred             EEEEEE
Confidence            444444

>PLN03160 uncharacterized protein; Provisional

Probab=89.53  E-value=1.2  Score=37.29  Aligned_cols=50  Identities=14%  Similarity=0.171  Sum_probs=29.6

Q ss_pred             ccccccCceeEEehhHHHHHHHHHHHHHhheeeeeecC--CCeEEEEEEEEe
Q 045946           27 AVIESQRKSSKCLVYVLVTIVTVSAALLISASIFLRPN--TPEVQLESVTVK   76 (214)
Q Consensus        27 ~~~~~~r~~~~c~~~~l~~~vll~ii~lil~~~v~rPk--~P~~~V~s~~l~   76 (214)
                      .++++..+|+.|++.+++++++++++++.+.|-.-.|+  --.++++++.+.
T Consensus        31 ~~r~~~~~c~~~~~a~~l~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~   82 (219)
T PLN03160         31 TRRRNCIKCCGCITATLLILATTILVLVFTVFRVKDPVIKMNGVTVTKLELI   82 (219)
T ss_pred             cccccceEEHHHHHHHHHHHHHHHHheeeEEEEccCCeEEEEEEEEeeeeec
Confidence            34557777777766655555555555444454566666  455666666553

>PRK12785 fliL flagellar basal body-associated protein FliL; Reviewed

Probab=83.91  E-value=8.1  Score=30.95  Aligned_cols=15  Identities=7%  Similarity=-0.066  Sum_probs=9.1

Q ss_pred             EEEeceEEEEEECCE
Q 045946          106 FEYKNCSGSVFYGSV  120 (214)
Q Consensus       106 ~~y~~~~~~v~Y~g~  120 (214)
                      .+|=...+.+-+++.
T Consensus        86 ~ryLkv~i~L~~~~~  100 (166)
T PRK12785         86 VQYLKLKVVLEVKDE  100 (166)
T ss_pred             ceEEEEEEEEEECCH
Confidence            366666666666654

>PF14927 Neurensin: Neurensin

Probab=83.08  E-value=1.3  Score=34.63  Aligned_cols=29  Identities=14%  Similarity=0.074  Sum_probs=19.2

Q ss_pred             ehhHHHHHHHHHHHHHhheeeeeecCCCeEE
Q 045946           39 LVYVLVTIVTVSAALLISASIFLRPNTPEVQ   69 (214)
Q Consensus        39 ~~~~l~~~vll~ii~lil~~~v~rPk~P~~~   69 (214)
                      +.++.++++++|++++++.|++  |++++..
T Consensus        47 ~~i~g~l~Ll~Gi~~l~vgY~v--P~~~e~~   75 (140)
T PF14927_consen   47 GFISGLLLLLLGIVALTVGYLV--PPKIEVF   75 (140)
T ss_pred             HHHHHHHHHHHHHHHHHhhccc--CCcceec
Confidence            4555566667788888888875  6555444

>PF06072 Herpes_US9: Alphaherpesvirus tegument protein US9; InterPro: IPR009278 This family consists of several US9 and related proteins from the Alphaherpesviruses

Probab=82.31  E-value=0.31  Score=32.37  Aligned_cols=8  Identities=50%  Similarity=0.522  Sum_probs=4.4

Q ss_pred             CCCCcCCC
Q 045946           18 PRSDQEYA   25 (214)
Q Consensus        18 ~~~d~~~~   25 (214)
                      ..||.|-|
T Consensus         4 SESDnETA   11 (60)
T PF06072_consen    4 SESDNETA   11 (60)
T ss_pred             CccccccH
Confidence            44666555

The function of the US9 protein is unknown although in Bovine herpesvirus 5 Us9 is essential for the anterograde spread of the virus from the olfactory mucosa to the bulb [].; GO: 0019033 viral tegument

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	214
1yyc_A	174	LEA protein, putative late embryogenesis abundant	98.55
1xo8_A	151	AT1G01470; structural genomics, protein structure	98.31
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	98.16

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=98.55  E-value=1.8e-07  Score=74.71  Aligned_cols=99  Identities=17%  Similarity=0.168  Sum_probs=77.3

Q ss_pred             CCCeEEEEEEEEeeEEeCCCCCCeEEEEEEEEEEEECCCceeEEEeceEEEEEECCEEEEeEEecC-ceeecccEEEEEE
Q 045946           64 NTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIRD-GRVEAREVKRINV  142 (214)
Q Consensus        64 k~P~~~V~s~~l~~~~~~~~~~~~ln~tl~~~v~~~NPN~~~~~y~~~~~~v~Y~g~~ig~~~vp~-~~~~~~~t~~~~~  142 (214)
                      ++|++++.++++.+++..       .++|.+.++++|||.+.+.+...+..+.-+|..++++..+. +.+++++++.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~l~-------~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~V  115 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVTRD-------GVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDV  115 (174)
T ss_dssp             CCCEEEEEEEEEEEECSS-------SEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEE
T ss_pred             CCCEEEEEEeEEeccccc-------eEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEE
Confidence            789999999999988643       36677788999999999999999999999999999999985 7999999999998


Q ss_pred             EEEEeeecccccCCccchhhhc-CCeEEEEEEE
Q 045946          143 TVDVDVRSNGNLDNQNLRSDIN-SGIVKLNSYA  174 (214)
Q Consensus       143 ~~~~~~~~~~l~~~~~l~~D~~-~G~v~l~~~~  174 (214)
                      ++.  +.-..+   ..+.+|+. .+.++-++++
T Consensus       116 pv~--v~~~~l---~~~~~~l~~~~~i~Y~L~g  143 (174)
T 1yyc_A          116 PVK--VAYSIA---VSLMKDMCTDWDIDYQLDI  143 (174)
T ss_dssp             EEE--ESHHHH---HHTCCCCCSSEEECEEEEE
T ss_pred             EEE--EEHHHH---HHHHHhcCCCCccceEEEE
Confidence            888  432222   23344553 3456654433

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=98.31  E-value=3.7e-07  Score=71.33  Aligned_cols=99  Identities=17%  Similarity=0.200  Sum_probs=76.4

Q ss_pred             cCCCeEEEEEEEEeeEEeCCCCCCeEEEEEEEEEEEECCCceeEEEeceEEEEEECCEEEEeEEec-CceeecccEEEEE
Q 045946           63 PNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIR-DGRVEAREVKRIN  141 (214)
Q Consensus        63 Pk~P~~~V~s~~l~~~~~~~~~~~~ln~tl~~~v~~~NPN~~~~~y~~~~~~v~Y~g~~ig~~~vp-~~~~~~~~t~~~~  141 (214)
                      -++|++++.++++.+++.       ..+++.+.++++|||.+.+.+...+..+.-+|..++++..+ ++.+++++++.+.
T Consensus        19 ~~~P~v~v~~v~~~~~~~-------~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~   91 (151)
T 1xo8_A           19 IPKPEGSVTDVDLKDVNR-------DSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALD   91 (151)
T ss_dssp             CCSCCCBCSEEEECCCTT-------TEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEE
T ss_pred             CCCCEEEEEEeEEeccCc-------ceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEE
Confidence            368999999998887753       35677888899999999999999999999999999999987 5899999999988


Q ss_pred             EEEEEeeecccccCCccchhhhc-CCeEEEEEE
Q 045946          142 VTVDVDVRSNGNLDNQNLRSDIN-SGIVKLNSY  173 (214)
Q Consensus       142 ~~~~~~~~~~~l~~~~~l~~D~~-~G~v~l~~~  173 (214)
                      +++.  +.-..+   ..+.+|+. .+.++-+++
T Consensus        92 vpv~--v~~~~l---~~~~~~l~~~~~i~Y~l~  119 (151)
T 1xo8_A           92 IPVV--VPYSIL---FNLARDVGVDWDIDYELQ  119 (151)
T ss_dssp             ECCC--EEHHHH---HHHHHHHHHHSEEEEEEE
T ss_pred             EEEE--EEHHHH---HHHHHhcccCCcccEEEE
Confidence            8877  432211   34445543 457776543

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=98.16  E-value=4.3e-05  Score=58.54  Aligned_cols=91  Identities=11%  Similarity=0.071  Sum_probs=66.1

Q ss_pred             EEEEEEEEEEEECCCceeEEEeceEEEEEECCEEEEeEEe-cCceeecccEEEEEEEEEEeeecccccCCccchhhhcCC
Q 045946           88 FNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKI-RDGRVEAREVKRINVTVDVDVRSNGNLDNQNLRSDINSG  166 (214)
Q Consensus        88 ln~tl~~~v~~~NPN~~~~~y~~~~~~v~Y~g~~ig~~~v-p~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~l~~D~~~G  166 (214)
                      -.+.|.+.+++.|||.+.+.++..+..+++.|..+|++.. ..+.++++++..+.+++.  +.-.++.  ..+.+.+.+|
T Consensus        16 ~~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~--i~~~~l~--~~~~~hi~ng   91 (136)
T 3but_A           16 SQTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLR--LNNSFLR--EWWVTHIANG   91 (136)
T ss_dssp             SEEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEE--EEHHHHT--THHHHHHHTT
T ss_pred             cEEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEE--EchHHhH--HHHHHHhhcC
Confidence            4566788899999999999999999999999999999984 578999999888888877  4433332  3466666666


Q ss_pred             eE-EEEEEEEEEEEEEEEE
Q 045946          167 IV-KLNSYAKLHGNVSLFN  184 (214)
Q Consensus       167 ~v-~l~~~~~v~grv~v~~  184 (214)
                      +- .++  +++..++.+++
T Consensus        92 e~s~l~--i~~~~~l~v~g  108 (136)
T 3but_A           92 EKTKIR--VAIKPTIEIGG  108 (136)
T ss_dssp             SEEEEE--EEEEEEEECC-
T ss_pred             CceEEE--EEEEEEEEeCC
Confidence            32 232  34444555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	214
d1xo8a_	151	b.1.25.1 (A:) Putative dessication related protein	9e-04

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 151

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.3 bits (84), Expect = 9e-04
 Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 8/91 (8%)

Query: 65  TPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGD 124
            PE  +  V +K+++         +V  + ++++ N           S +       +G 
Sbjct: 21  KPEGSVTDVDLKDVN-------RDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGK 73

Query: 125 VKIRD-GRVEAREVKRINVTVDVDVRSNGNL 154
            KI D G ++A+++  +++ V V      NL
Sbjct: 74  GKIPDPGSLKAKDMTALDIPVVVPYSILFNL 104

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	214
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	98.47

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.47  E-value=2.1e-08  Score=76.59  Aligned_cols=105  Identities=17%  Similarity=0.222  Sum_probs=79.4

Q ss_pred             ecCCCeEEEEEEEEeeEEeCCCCCCeEEEEEEEEEEEECCCceeEEEeceEEEEEECCEEEEeEEec-CceeecccEEEE
Q 045946           62 RPNTPEVQLESVTVKNLSHGNGTSPSFNVTLVTELTIDNENYGYFEYKNCSGSVFYGSVTVGDVKIR-DGRVEAREVKRI  140 (214)
Q Consensus        62 rPk~P~~~V~s~~l~~~~~~~~~~~~ln~tl~~~v~~~NPN~~~~~y~~~~~~v~Y~g~~ig~~~vp-~~~~~~~~t~~~  140 (214)
                      +-+.|++++.++++.+++.       ..+++.+.++++|||.+++.....+..++.+|..++++..+ ++..++++++.+
T Consensus        18 ~~~kPev~l~~v~i~~v~~-------~~~~l~~~l~V~NPN~~~l~i~~l~y~l~~~g~~ia~G~~~~~~~ipa~~~~~v   90 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVNR-------DSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTAL   90 (151)
T ss_dssp             CCCSCCCBCSEEEECCCTT-------TEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEE
T ss_pred             CCCCCeEEEEEEEeeeccc-------ceEEEEEEEEEECCCCCceeeeeEEEEEEECCEEEEeEecCCCcEEcCCCcEEE
Confidence            4578999999999988864       35667788899999999999999999999999999999886 579999999998


Q ss_pred             EEEEEEeeecccccCCccchhhhc-CCeEEEEEEEEEEEEEEE
Q 045946          141 NVTVDVDVRSNGNLDNQNLRSDIN-SGIVKLNSYAKLHGNVSL  182 (214)
Q Consensus       141 ~~~~~~~~~~~~l~~~~~l~~D~~-~G~v~l~~~~~v~grv~v  182 (214)
                      .+++.  +.-..+   ..+.+|+. ++.++-+    ++|++.+
T Consensus        91 ~vpv~--v~~~~l---~~~~~~i~~~~~i~Y~----l~g~l~~  124 (151)
T d1xo8a_          91 DIPVV--VPYSIL---FNLARDVGVDWDIDYE----LQIGLTI  124 (151)
T ss_dssp             EECCC--EEHHHH---HHHHHHHHHHSEEEEE----EEEEEEE
T ss_pred             EEEEE--EEHHHH---HHHHHhhccCCCccEE----EEEEEEE
Confidence            88876  422111   34555653 3556654    4555554