Citrus Sinensis ID: 046032

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460----
Protein Sequence
MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFAIGLIAERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAKDVKVNQADFANEIRIKTSLSQEPLTKELWVFIFNEIKRKSKNGDEIRRKTESGQDPEINDPEVGTIKIPNFEYDLEADIRKGLRKLFSAKGDCTLKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEKTAKEAISDEETYNAREFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKISPATRAKLNSSVNSMPLDQAKRMVDRLQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAHFGLLEPKSED
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHcccccHHHHHHHccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccccHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEHHHHHHHccccccEEEEEHccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcHHHHHHHHccHHHHHHHccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHccHHHHHHcHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHcccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccHHHHHHHHHHHHHcccccccccc
Coil and Loop (DISEMBL)
mdnpipesvkktwdnwniRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFAIGLIAErainsqtptksnELLVLWAPFLllhlggpdtiTAVALEDNELWLRQLFGLIFQAGFTFYVFLLslpgnklfvpTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAKDVKVNQADFANEIRIktslsqepltKELWVFIFNEIKRkskngdeirrktesgqdpeindpevgtikipnfeydLEADIRKGLRKLFSakgdctlkemdtncdlIQFVEKVNFSFGKSIIFWHIATEFLYEKTAKEAISDEETYNAREFSKILSDYMLYLLVLKptmlnskenvgleTLRDEAKfcfqgkispatraklnssvnsmpldQAKRMVDRLQSLDYLKDKKWEIVSKVWVELMSYAACHSratrthveqvsnggELFTFVWVLMAHfgllepksed
Flexible Loop (DISEMBL)
mdnpipesvkktwdnwNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFAIGLIAERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAKDVKVNQADFANEIRiktslsqepltkELWVFIFNEikrkskngdeirrktesgqdpeindpevgtikipnfEYDLEADIRKGLRKLFSAKGDCTLKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEKTAKEAISDEETYNAREFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKIspatraklnssvnsmpldqAKRMVDRLQsldylkdkkWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAHFgllepksed
Low Complexity Region (SEG)
MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFAIGLIAERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAKDVKVNQADFANEIRIKTSLSQEPLTKELWVFIFNEIKRKSKNGDEIRRKTESGQDPEINDPEVGTIKIPNFEYDLEADIRKGLRKLFSAKGDCTLKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEKTAKEAISDEETYNAREFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKISPATRAKLNSSVNSMPLDQAKRMVDRLQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAHFGLLEPKSED
Disordered region (IsUnstruct)
**********KTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFAIGLIAERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAKDVKVNQADFANEIRIKTSLSQEPLTKELWVFIFNEI**************************VGTIKIPNFEYDLEADIRKGLRKLFSAKGDCTLKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEKTAKEAISDEETYNAREFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKI***********************VDRLQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAHFGLL******
Disordered Region (DISOPRED)
*****PE*VKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFAIGL*****************LVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAKDVKVNQADFANEIRIKTSLSQEPLTKELWVFIFNEIKRKSKNGDEIRRKTESGQDPEINDPEVGTIKIPNFEYDLEADIRKGLRKLFSAKGDCTLKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEK**************REFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKISPATRAKLNSSVNSMPLDQAKRMVDRLQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAH***L******
Disordered Region (DISEMBL)
MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFAIGLIAERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAKDVKVNQADFANEIRIKTSLSQEPLTKELWVFIFNEIKRKSKNGDEIRRKTESGQDPEINDPEVGTIKIPNFEYDLEADIRKGLRKLFSAKGDCTLKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEKTAKEAISDEETYNAREFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKISPATRAKLNSSVNSMPLDQAKRMVDRLQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAHFGLLEPKSED
Disordered Region (DISPRO)
**NPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFAIGLIAERAIN*****KSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAKDVKVNQADFANEIRIKTSLSQEPLTKELWVFIFNEIKRKSKNGDEIRRKTESGQDPEINDPEVGTIKIPNFEYDLEADIRKGLRKLFSAKGDCTLKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEKTAKEAISDEETYNAREFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKISPATRAKLNSSVNSMPLDQAKRMVDRLQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAHFGLL******
Transmembrane Helix (TMHMM)
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFAIGLIAERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAKDVKVNQADFANEIRIKTSLSQEPLTKELWVFIFNEIKRKSKNGDEIRRKTESGQDPEINDPEVGTIKIPNFEYDLEADIRKGLRKLFSAKGDCTLKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEKTAKEAISDEETYNAREFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKISPATRAKLNSSVNSMPLDQAKRMVDRLQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAHFGLLEPKSED
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	464
297791441	488	predicted protein [Arabidopsis lyrata su	0.881	0.838	0.388	7e-74
297743825	917	unnamed protein product [Vitis vinifera]	0.954	0.483	0.339	4e-55
255575740	769	conserved hypothetical protein [Ricinus	0.383	0.231	0.595	4e-52
356524250	923	PREDICTED: uncharacterized protein LOC10	0.517	0.260	0.480	5e-51
52354495	702	hypothetical protein AT5G45540 [Arabidop	0.377	0.249	0.558	7e-50
15242429	803	uncharacterized protein [Arabidopsis tha	0.377	0.217	0.558	8e-50
449469424	757	PREDICTED: uncharacterized protein LOC10	0.366	0.224	0.605	2e-49
297791187	838	hypothetical protein ARALYDRAFT_494437 [	0.418	0.231	0.525	2e-49
224109758	729	predicted protein [Populus trichocarpa]	0.379	0.241	0.548	3e-49
15242412	866	uncharacterized protein [Arabidopsis tha	0.409	0.219	0.515	2e-48

>gi|297791441|ref|XP_002863605.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297309440|gb|EFH39864.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  284 bits (726), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 198/510 (38%), Positives = 271/510 (53%), Gaps = 101/510 (19%)

Query: 5   IPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATF 64
           IP ++KK  D WNIRG+++ SLLLQT LI LAP+RK    KL+  +IW+AY LAD  A +
Sbjct: 4   IPPAIKKILDIWNIRGLVILSLLLQTSLIFLAPMRKRTSKKLLASVIWTAYLLADWTANY 63

Query: 65  AIGLIAERAINSQTP---TKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGL 121
            +  I +       P    K+ +LL LWAPFLLLHLGGPDTITA+ALEDN LW R LFGL
Sbjct: 64  VVSQITKNQGKDSEPGDLPKNKKLLALWAPFLLLHLGGPDTITALALEDNALWKRHLFGL 123

Query: 122 IFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLAS----WEK----FRE 173
           +FQA    YV + SL  N L+ P  L+F+ G IK  ERTRA+ + S    W K    FR 
Sbjct: 124 VFQALAGVYVVVQSLE-NVLWPPITLLFVTGTIKYVERTRALSIRSVLRQWSKKNLMFRY 182

Query: 174 ST-------IIELAKDVKVNQADFANEIRIKTSLSQ------EPLTKELWVFIFNEIKRK 220
           +           + +  +V          +KT L +      EPLTK  W FIF E+K K
Sbjct: 183 TVYPLYLVFFAGIPEFFRVLWKYIDRIFSVKTYLDEFRFVLREPLTKNQWEFIFYELKDK 242

Query: 221 SKNGDEIRRKTESGQDPEINDPEVGTIKIPNFEYDLEADIRKGLRKLFSAKG-----DCT 275
           S+  +                P+V                    +KL  A+G     D  
Sbjct: 243 SRFAE---------------TPKVA-------------------KKLSWARGQWALQDSI 268

Query: 276 LKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEKTAKEAISD--EETYNAREFSKI 333
           L E+DT   L+ ++EKV++   +S++ WHIATE  +++     + +   E+Y+ REFSKI
Sbjct: 269 LAEIDT---LMCYIEKVDYD--QSLLLWHIATELCFQEEEGGEMENLSRESYDDREFSKI 323

Query: 334 LSDYMLYLLVLKPTMLNSKENVGLETLR---DEAKFCFQGKISPATR-----AKLNSSVN 385
           +SDYM+YLL+++P +++    +G    R    EA+  F+GK     R     +K+  SVN
Sbjct: 324 ISDYMMYLLIMRPKLMSEVSGMGTIRFRYTKAEAERFFKGKHIKNLRDMKLASKMVLSVN 383

Query: 386 SMPLDQAKRMVDRLQSLDYL------------------KDKKWEIVSKVWVELMSYAACH 427
           +   D  + +V   QS   L                  +D KW ++SKVWVEL+ YAA H
Sbjct: 384 N---DIEQILVKGNQSKSVLFDASMLAKELRNLKESSNEDGKWRVLSKVWVELLCYAASH 440

Query: 428 SRATRTHVEQVSNGGELFTFVWVLMAHFGL 457
            +AT  HV Q+S GGEL  FVW+LM HFGL
Sbjct: 441 CKATE-HVAQLSRGGELLNFVWLLMVHFGL 469

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743825|emb|CBI36708.3| unnamed protein product [Vitis vinifera]

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 168/495 (33%), Positives = 240/495 (48%), Gaps = 52/495 (10%)

Query: 6   PESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATFA 65
           P SV K WD W +R ++L SL LQ VLILL   RK +    I +++W AY  AD  A   
Sbjct: 418 PPSVTKLWDEWEVRVLVLISLFLQIVLILLGNRRKYIPTNRIRVILWLAYLAADWIAAVC 477

Query: 66  IGLIAERAINSQ--TPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIF 123
           IG+++    + +  +  ++N +   W PFLLLHLGGPDTITA ++EDNELWLR L GL+ 
Sbjct: 478 IGVLSNSQGDCEDDSSQQTNIIRAFWTPFLLLHLGGPDTITAYSMEDNELWLRHLLGLVV 537

Query: 124 QAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEK---FRESTIIELA 180
           Q G +FY+FL +  G  L +  I +F+AG+IK  ERT A+  AS  +   F  S      
Sbjct: 538 QFGGSFYIFLRAWKGMPLNILAIPMFVAGLIKYGERTWALRSASSSQSQGFNVSFKPVPE 597

Query: 181 KDVKVNQADFANEIRIKTSLSQEPLTKELWVFI-----------FNEIKRKSKNGDEIRR 229
              KVN  D    I    S +   +  E++  I            ++ +   K+ DE+ R
Sbjct: 598 PSTKVNCLDRDAPILQMGSPTPLAIVLEMYAIIVLLSSDWTILSLSKHRITLKDRDEMDR 657

Query: 230 --KTESGQDPEINDPEVGTIKIP---------NFEYDLE-------------ADIRKGLR 265
             K  S    + N         P          F Y  E             AD  K L 
Sbjct: 658 ANKRWSNSMAQYNLMSFCLKDKPIRWYLELLQGFSYVYEMLEKHHYKSSVTVADNLKAL- 716

Query: 266 KLFSAKGDCTLKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEKTAK-EAISDEET 324
            +F    D + ++ + + DL   VE+    F +SI+ WHIAT+ LY    + +  S  + 
Sbjct: 717 -IFQHLSDKSKEQYNCHSDLGWSVEE---DFDQSILLWHIATDLLYYTDHQNQNPSSVKN 772

Query: 325 YNAREFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKISPATRAKLNSSV 384
            + R  SK++SDYMLYLLV+ P ML   + +G    +D    C + K     +  +    
Sbjct: 773 PDCRTISKMVSDYMLYLLVMCPFML--PDGIGQIRFQDS---CAEAKQFLEDKKLVGEGG 827

Query: 385 NSMPLDQAKRMVDRLQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGEL 444
                       + LQSL   + +KWE++  VWVE++ YAA        H +Q+  GGEL
Sbjct: 828 TEACQKLLAVNTESLQSLKIAEKEKWEMICDVWVEMLCYAASQC-GWNQHAQQLRRGGEL 886

Query: 445 FTFVWVLMAHFGLLE 459
            T VW+LMAHFG+ E
Sbjct: 887 LTHVWLLMAHFGISE 901

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575740|ref|XP_002528769.1| conserved hypothetical protein [Ricinus communis] gi|223531772|gb|EEF33591.1| conserved hypothetical protein [Ricinus communis]

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/188 (59%), Positives = 140/188 (74%), Gaps = 10/188 (5%)

Query: 1   MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADS 60
           M NPIP+SVKK W++WNIRG ++FSLLLQT+L+L AP RK    KLIILLIWS Y LAD+
Sbjct: 1   MVNPIPDSVKKIWEHWNIRGALMFSLLLQTLLVLFAPSRKRTSRKLIILLIWSGYLLADA 60

Query: 61  AATFAIGLIAERAINSQTPTKS----------NELLVLWAPFLLLHLGGPDTITAVALED 110
            ATFA+GLI+    N  +  K+          ++LL  WAPFLL+HLGGPDTITA ALED
Sbjct: 61  TATFAVGLISNSQSNFGSDRKAQKTKNSDRENSDLLAFWAPFLLVHLGGPDTITAFALED 120

Query: 111 NELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEK 170
           NELWLR L  L+FQA  T YVF+ +LP NK+ +PT L+F+AGIIK  ERTR++YLAS ++
Sbjct: 121 NELWLRHLLALVFQAVATGYVFIQTLPENKVMIPTFLLFLAGIIKYSERTRSLYLASMDR 180

Query: 171 FRESTIIE 178
           FR+S + E
Sbjct: 181 FRDSMLKE 188

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356524250|ref|XP_003530743.1| PREDICTED: uncharacterized protein LOC100794157 [Glycine max]

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/252 (48%), Positives = 147/252 (58%), Gaps = 12/252 (4%)

Query: 1   MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADS 60
           M NPIP   K  W  WNIRGVIL SL LQ  LI LAP RK      ++LL+WS Y LAD 
Sbjct: 1   MVNPIPTFAKNVWSKWNIRGVILVSLCLQITLIFLAPFRKRSRKSYLVLLLWSTYLLADY 60

Query: 61  AATFAIGLIAERAINSQTPTKS--NELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQL 118
            A F +GLI+ +  +  TP  S  + LL  W PFLLLHLGGPDTITA ALEDNELWLR +
Sbjct: 61  TANFCVGLISNKYGDEDTPISSVNDFLLAFWTPFLLLHLGGPDTITAFALEDNELWLRHM 120

Query: 119 FGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIE 178
            GLI Q   T YVFLL+LP N L++PT LVF AGIIK  ERTR++ LAS   FR+S + +
Sbjct: 121 LGLIVQVCLTAYVFLLTLPENTLWIPTALVFTAGIIKFAERTRSLQLASVGHFRQSIVRK 180

Query: 179 LAKDVKVNQADFANEI--RIKTSLSQEPLT-KELWVFIFNEIKRKSKNGDEIRRKTESGQ 235
              D   N A    E+  R+   L  E +T  E+    F +I     +G          +
Sbjct: 181 --PDPGPNYAKLMEELKSRVDAGLPTEIVTMPEISDDPFLDIDEPETSG-----GNPDHE 233

Query: 236 DPEINDPEVGTI 247
            P+ +D  VG I
Sbjct: 234 HPKTDDEVVGAI 245

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|52354495|gb|AAU44568.1| hypothetical protein AT5G45540 [Arabidopsis thaliana]

 Score =  204 bits (519), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 100/179 (55%), Positives = 129/179 (72%), Gaps = 4/179 (2%)

Query: 1   MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADS 60
           M + IP  ++K WD WNIRGVI+ SL LQT+LI  AP R+    KL ++LIWSAY LAD 
Sbjct: 1   MTDMIPPHLRKLWDKWNIRGVIILSLFLQTILIFFAPSRRRTAKKLFLVLIWSAYLLADW 60

Query: 61  AATFAIGLIA---ERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQ 117
           AA +A+G I+   E    S  P+K+ ELL  W+PFLLLHLGGPDTITA+ALEDNELW R 
Sbjct: 61  AADYAVGQISDSQEEEAESNKPSKNRELLAFWSPFLLLHLGGPDTITALALEDNELWDRH 120

Query: 118 LFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTI 176
           LF L+ QA  T YV LLS+P N+L  PT+++F+ G+IK  ERT A++ AS +KF++S +
Sbjct: 121 LFSLVCQAVATVYVILLSIP-NRLLTPTLIMFVGGVIKYVERTAALFSASLDKFKDSML 178

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242429|ref|NP_199367.1| uncharacterized protein [Arabidopsis thaliana] gi|9758744|dbj|BAB09182.1| unnamed protein product [Arabidopsis thaliana] gi|332007883|gb|AED95266.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  204 bits (519), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 100/179 (55%), Positives = 129/179 (72%), Gaps = 4/179 (2%)

Query: 1   MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADS 60
           M + IP  ++K WD WNIRGVI+ SL LQT+LI  AP R+    KL ++LIWSAY LAD 
Sbjct: 1   MTDMIPPHLRKLWDKWNIRGVIILSLFLQTILIFFAPSRRRTAKKLFLVLIWSAYLLADW 60

Query: 61  AATFAIGLIA---ERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQ 117
           AA +A+G I+   E    S  P+K+ ELL  W+PFLLLHLGGPDTITA+ALEDNELW R 
Sbjct: 61  AADYAVGQISDSQEEEAESNKPSKNRELLAFWSPFLLLHLGGPDTITALALEDNELWDRH 120

Query: 118 LFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTI 176
           LF L+ QA  T YV LLS+P N+L  PT+++F+ G+IK  ERT A++ AS +KF++S +
Sbjct: 121 LFSLVCQAVATVYVILLSIP-NRLLTPTLIMFVGGVIKYVERTAALFSASLDKFKDSML 178

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469424|ref|XP_004152420.1| PREDICTED: uncharacterized protein LOC101209159 [Cucumis sativus] gi|449488744|ref|XP_004158159.1| PREDICTED: uncharacterized protein LOC101224461 [Cucumis sativus]

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 106/175 (60%), Positives = 126/175 (72%), Gaps = 5/175 (2%)

Query: 5   IPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATF 64
           IP  VK+ W+ WN RG+ILFSL LQT LIL APLRK    K  I LIWSAY LAD  A+F
Sbjct: 28  IPPHVKELWERWNTRGLILFSLSLQTFLILCAPLRKRTSRKFPIFLIWSAYLLADWTASF 87

Query: 65  AIGLIAERAINSQTPTKSN-ELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIF 123
            +GLI+    ++Q+ + +N  LL  WAPFLL+HLGGPDTITA ALEDN LWLR L GL+F
Sbjct: 88  IVGLIS----SNQSKSDANVYLLAFWAPFLLIHLGGPDTITAFALEDNALWLRHLIGLLF 143

Query: 124 QAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIE 178
           Q   T YVF+ ++P NKL VP IL+F+AGIIK  ERTRA+YLAS   FR S + E
Sbjct: 144 QVVATVYVFIQTIPQNKLRVPAILMFLAGIIKYAERTRALYLASLGSFRASMLKE 198

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297791187|ref|XP_002863478.1| hypothetical protein ARALYDRAFT_494437 [Arabidopsis lyrata subsp. lyrata] gi|297309313|gb|EFH39737.1| hypothetical protein ARALYDRAFT_494437 [Arabidopsis lyrata subsp. lyrata]

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 105/200 (52%), Positives = 136/200 (68%), Gaps = 6/200 (3%)

Query: 1   MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADS 60
           M N IP+ +K  WD WNIRG ++ SL LQ +LI  +PLRK    +L+I+L+WS+Y LAD 
Sbjct: 1   MVNVIPKHIKDVWDRWNIRGAVILSLTLQAILICFSPLRKRTPRRLLIVLVWSSYLLADW 60

Query: 61  AATFAIGLIAE---RAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQ 117
           +A FA+GLI++   + +    P +  +L+ LWAPFLLLHLGGPDTITA ALEDN LWLR 
Sbjct: 61  SANFAVGLISKNQGKDLKPGAPPQDKKLMALWAPFLLLHLGGPDTITAFALEDNALWLRH 120

Query: 118 LFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTII 177
           +FGL+FQA    YV L+SLP N L+V  +LVF++G IK  ERT A+Y AS +KFR+S I 
Sbjct: 121 VFGLVFQAIAGVYVVLMSLP-NSLWVIILLVFVSGTIKYLERTTALYSASLDKFRDSMI- 178

Query: 178 ELAKDVKVNQADFANEIRIK 197
             A D   N A    E + K
Sbjct: 179 -QAPDPGPNYAKLMEEYKAK 197

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224109758|ref|XP_002333207.1| predicted protein [Populus trichocarpa] gi|222835096|gb|EEE73545.1| predicted protein [Populus trichocarpa]

 Score =  202 bits (514), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 97/177 (54%), Positives = 126/177 (71%), Gaps = 1/177 (0%)

Query: 1   MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADS 60
           M +PIP+ VK+ WD+WNIR  IL SL LQ  LIL A  RK   +KL+I LIWS Y LAD+
Sbjct: 1   MPDPIPDRVKRLWDHWNIRSAILASLSLQAFLILFASQRKRTAHKLVIFLIWSGYLLADT 60

Query: 61  AATFAIGLIA-ERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLF 119
            A FAIG I+  +  + +    +N+LL  WAPFLL+HLGGPDTITA ALEDNELWLR + 
Sbjct: 61  VANFAIGHISTSQGTSDRKHRDNNDLLAFWAPFLLVHLGGPDTITAFALEDNELWLRHML 120

Query: 120 GLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTI 176
               Q   T YVF L+L  NK+++PT+L+F+AG+IK FERT ++Y AS ++FR+S +
Sbjct: 121 TFATQGFATLYVFFLTLTSNKVWIPTVLLFLAGVIKYFERTYSLYSASLDQFRDSML 177

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15242412|ref|NP_199360.1| uncharacterized protein [Arabidopsis thaliana] gi|9758737|dbj|BAB09175.1| unnamed protein product [Arabidopsis thaliana] gi|110742213|dbj|BAE99033.1| hypothetical protein [Arabidopsis thaliana] gi|332007873|gb|AED95256.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 101/196 (51%), Positives = 134/196 (68%), Gaps = 6/196 (3%)

Query: 5   IPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATF 64
           IP+ +K  WD WNIRG ++ SL LQ +LI  +PLRK    +L+I+L+WS+Y LAD +A F
Sbjct: 5   IPKHIKDVWDRWNIRGAVILSLTLQAILICFSPLRKRTPRRLLIVLVWSSYLLADWSANF 64

Query: 65  AIGLIAE---RAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGL 121
           A+GLI++   + +    P +  +++ LWAPFLLLHLGGPDTITA ALEDN LWLR +FGL
Sbjct: 65  AVGLISKNQGKDLKPDDPPQDKKVMALWAPFLLLHLGGPDTITAFALEDNALWLRHVFGL 124

Query: 122 IFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAK 181
           +FQA    YV ++SLP N L+V  +LVF++G IK  ERT A+Y AS +KFR+S I   A 
Sbjct: 125 VFQAIAGVYVVVMSLP-NSLWVVIVLVFVSGTIKYLERTTALYSASLDKFRDSMI--QAP 181

Query: 182 DVKVNQADFANEIRIK 197
           D   N A    E + K
Sbjct: 182 DPGPNYAKLMEEYKAK 197

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	464
TAIR|locus:2163543	866	AT5G45470 "AT5G45470" [Arabido	0.409	0.219	0.515	2.3e-92
TAIR|locus:2163598	798	AT5G45530 "AT5G45530" [Arabido	0.400	0.233	0.5	9.1e-83
TAIR|locus:2163558	877	AT5G45480 "AT5G45480" [Arabido	0.377	0.199	0.558	1.1e-80
TAIR|locus:2163518	803	AT5G45540 "AT5G45540" [Arabido	0.426	0.246	0.509	5.1e-68
TAIR|locus:2163523	703	AT5G45460 "AT5G45460" [Arabido	0.418	0.275	0.52	6.7e-63
TAIR|locus:2117204	751	AT4G19090 "AT4G19090" [Arabido	0.301	0.186	0.458	1.5e-47
TAIR|locus:2117194	327	AT4G19080 "AT4G19080" [Arabido	0.112	0.159	0.566	4.6e-24

TAIR|locus:2163543 AT5G45470 "AT5G45470" [Arabidopsis thaliana (taxid:3702)]

 Score = 500 (181.1 bits), Expect = 2.3e-92, Sum P(4) = 2.3e-92
 Identities = 101/196 (51%), Positives = 134/196 (68%)

Query:     5 IPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATF 64
             IP+ +K  WD WNIRG ++ SL LQ +LI  +PLRK    +L+I+L+WS+Y LAD +A F
Sbjct:     5 IPKHIKDVWDRWNIRGAVILSLTLQAILICFSPLRKRTPRRLLIVLVWSSYLLADWSANF 64

Query:    65 AIGLIAE---RAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGL 121
             A+GLI++   + +    P +  +++ LWAPFLLLHLGGPDTITA ALEDN LWLR +FGL
Sbjct:    65 AVGLISKNQGKDLKPDDPPQDKKVMALWAPFLLLHLGGPDTITAFALEDNALWLRHVFGL 124

Query:   122 IFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAK 181
             +FQA    YV ++SLP N L+V  +LVF++G IK  ERT A+Y AS +KFR+S I   A 
Sbjct:   125 VFQAIAGVYVVVMSLP-NSLWVVIVLVFVSGTIKYLERTTALYSASLDKFRDSMI--QAP 181

Query:   182 DVKVNQADFANEIRIK 197
             D   N A    E + K
Sbjct:   182 DPGPNYAKLMEEYKAK 197

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2163598 AT5G45530 "AT5G45530" [Arabidopsis thaliana (taxid:3702)]

 Score = 442 (160.7 bits), Expect = 9.1e-83, Sum P(4) = 9.1e-83
 Identities = 96/192 (50%), Positives = 124/192 (64%)

Query:     5 IPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADSAATF 64
             IP ++KK  D WNIRG+++ SLL QT LI LAP+RK    KL+  ++W+AY LAD  A +
Sbjct:     4 IPPAIKKILDKWNIRGLVIMSLLFQTSLIFLAPMRKRTSKKLLAAVLWTAYLLADWTANY 63

Query:    65 AIGLIAE---RAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGL 121
             A+  I +   +      P K+ +LL LWAPFLLLHLGGPDTITA+ALEDN LW R LFGL
Sbjct:    64 AVSQITKNQGKETEPGDPPKNKKLLALWAPFLLLHLGGPDTITALALEDNALWQRHLFGL 123

Query:   122 IFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAK 181
             + QA    Y  + SL  N L+ P  L+FI G IK  ERTRA+Y AS +KF++  +++ A 
Sbjct:   124 VSQALAGVYAVVQSLE-NVLWPPITLLFITGTIKYVERTRALYSASLDKFKDR-MLQRA- 180

Query:   182 DVKVNQADFANE 193
             D   N A    E
Sbjct:   181 DAGSNYAKLMEE 192

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2163558 AT5G45480 "AT5G45480" [Arabidopsis thaliana (taxid:3702)]

 Score = 483 (175.1 bits), Expect = 1.1e-80, Sum P(4) = 1.1e-80
 Identities = 100/179 (55%), Positives = 121/179 (67%)

Query:     1 MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADS 60
             M N IP+ +K  WD W+IR  ++FSL LQT LI  AP RK    K+++  IWSAY LAD 
Sbjct:     1 MVNAIPKPIKDIWDEWSIRSTLIFSLSLQTFLIFFAPQRKRSSRKVLLSFIWSAYLLADW 60

Query:    61 AATFAIGLIAERAINSQTP---TKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQ 117
             +A FA G I++   +   P    KS EL   W PFLLLHLGGPDTITA+ALEDNELWLR 
Sbjct:    61 SANFAAGQISDSQGDDPEPGEPKKSAELFAFWVPFLLLHLGGPDTITALALEDNELWLRH 120

Query:   118 LFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTI 176
             L GL FQ+  T YV L SLP N L+ P +LVF  G+IK  ERT A+YLAS +KF++S I
Sbjct:   121 LLGLFFQSVATVYVLLQSLP-NALWKPILLVFATGVIKYVERTLALYLASLDKFKDSMI 178

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0005886 "plasma membrane" evidence=IDA

GO:0006569 "tryptophan catabolic process" evidence=RCA

GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2163518 AT5G45540 "AT5G45540" [Arabidopsis thaliana (taxid:3702)]

 Score = 515 (186.3 bits), Expect = 5.1e-68, Sum P(2) = 5.1e-68
 Identities = 104/204 (50%), Positives = 137/204 (67%)

Query:     1 MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADS 60
             M + IP  ++K WD WNIRGVI+ SL LQT+LI  AP R+    KL ++LIWSAY LAD 
Sbjct:     1 MTDMIPPHLRKLWDKWNIRGVIILSLFLQTILIFFAPSRRRTAKKLFLVLIWSAYLLADW 60

Query:    61 AATFAIGLIA---ERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQ 117
             AA +A+G I+   E    S  P+K+ ELL  W+PFLLLHLGGPDTITA+ALEDNELW R 
Sbjct:    61 AADYAVGQISDSQEEEAESNKPSKNRELLAFWSPFLLLHLGGPDTITALALEDNELWDRH 120

Query:   118 LFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTII 177
             LF L+ QA  T YV LLS+P N+L  PT+++F+ G+IK  ERT A++ AS +KF++S + 
Sbjct:   121 LFSLVCQAVATVYVILLSIP-NRLLTPTLIMFVGGVIKYVERTAALFSASLDKFKDSMLD 179

Query:   178 ELAKDVKVNQADFANEIRIKTSLS 201
             +   D   N A    E   +  ++
Sbjct:   180 D--PDPGANYAKLMEEYEARKKMN 201

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2163523 AT5G45460 "AT5G45460" [Arabidopsis thaliana (taxid:3702)]

 Score = 487 (176.5 bits), Expect = 6.7e-63, Sum P(3) = 6.7e-63
 Identities = 104/200 (52%), Positives = 131/200 (65%)

Query:     1 MDNPIPESVKKTWDNWNIRGVILFSLLLQTVLILLAPLRKGMGYKLIILLIWSAYFLADS 60
             M + IP+ +K  WD WNIRG I  SL LQ  LI  +PLRK    + +I++IWS+Y LAD 
Sbjct:     1 MVDVIPKHIKDAWDRWNIRGTIFLSLTLQAFLICFSPLRKRTPRRHLIIVIWSSYLLADW 60

Query:    61 AATFAIGLIAE---RAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQ 117
             +A FA+GLI++   + +    P +  +L+ LWAPFLLLHLGGPDTITA ALEDN LWLR 
Sbjct:    61 SANFAVGLISKNQGKDLKPDDPPQDKKLMALWAPFLLLHLGGPDTITAFALEDNALWLRN 120

Query:   118 LFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTII 177
             +FGL+FQA    YV L SLP N L+V  +LVFI+G IK  ERT A+Y AS +KFR+S I 
Sbjct:   121 VFGLVFQAIAGVYVVLQSLP-NSLWVTILLVFISGTIKYLERTTALYSASLDKFRDSMI- 178

Query:   178 ELAKDVKVNQADFANEIRIK 197
                 D   N A    E + K
Sbjct:   179 -QGPDPGPNYAKLMEEYKAK 197

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117204 AT4G19090 "AT4G19090" [Arabidopsis thaliana (taxid:3702)]

 Score = 289 (106.8 bits), Expect = 1.5e-47, Sum P(3) = 1.5e-47
 Identities = 67/146 (45%), Positives = 91/146 (62%)

Query:    66 IGLIAE---RAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLI 122
             + LIA+   + +    P ++ +L+ LWAPFLLLHLGGPDTITA +LEDN LW R   GL+
Sbjct:    60 VALIAKNQGKYLKPDDPPQNKKLVALWAPFLLLHLGGPDTITAFSLEDNALWNRHFLGLV 119

Query:   123 FQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIELAKD 182
             FQA    YV + SLP N L V  +L+FIAG  K  ERT A+YLAS +K+R S +   A +
Sbjct:   120 FQALAGVYVVVQSLP-NVLSVIILLLFIAGTSKYLERTIALYLASSDKYRNSML--QASN 176

Query:   183 VKVNQADFANEIRIKTSLSQEPLTKE 208
              + +  D   ++ + T L+ E   KE
Sbjct:   177 SRFDYTDQTRDLDMDTKLASEMNMKE 202

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2117194 AT4G19080 "AT4G19080" [Arabidopsis thaliana (taxid:3702)]

 Score = 166 (63.5 bits), Expect = 4.6e-24, Sum P(3) = 4.6e-24
 Identities = 30/53 (56%), Positives = 39/53 (73%)

Query:   407 DKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAHFGLLE 459
             D  W++VSKVWVE++ YAA H  + + H  Q++ GGEL  FVW+LMAHFGL E
Sbjct:   252 DAMWKVVSKVWVEMLCYAATHCDS-KQHAAQLNKGGELINFVWLLMAHFGLGE 303

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: Al_scaffold_0008_555 annotation not avaliable (488 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	464
pfam13968	362	pfam13968, DUF4220, Domain of unknown function (DU	2e-46
pfam04578	59	pfam04578, DUF594, Protein of unknown function, DU	3e-18

>gnl|CDD|222480 pfam13968, DUF4220, Domain of unknown function (DUF4220)

 Score =  164 bits (417), Expect = 2e-46
 Identities = 70/143 (48%), Positives = 86/143 (60%), Gaps = 6/143 (4%)

Query: 51  IWSAYFLADSAATFAIGLIAERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALED 110
           +W AY LADS AT+A+GL++     S      ++L+  WAPFLLLHLGGPDTITA +LED
Sbjct: 1   LWLAYLLADSIATYALGLLS----LSSGDPARHQLVAFWAPFLLLHLGGPDTITAYSLED 56

Query: 111 NELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEK 170
           NELWLR L GL+ Q     YV   S PG  L VP +L+F+ G+IK  ER  A+  AS E 
Sbjct: 57  NELWLRHLLGLLVQVFLALYVLYKSWPGQPLLVPAVLMFVVGVIKYGERIWALRSASMES 116

Query: 171 FRESTIIELAKDVKVNQADFANE 193
            R S + E   D   N A F   
Sbjct: 117 IRSSMLGE--PDPGPNYAKFMEG 137

This family is found in plants and is often associated with DUF294, pfam04578. Length = 362

>gnl|CDD|218157 pfam04578, DUF594, Protein of unknown function, DUF594

 Score = 78.0 bits (193), Expect = 3e-18
 Identities = 26/59 (44%), Positives = 40/59 (67%), Gaps = 1/59 (1%)

Query: 399 LQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAHFGL 457
           L   +  ++K+WE++++VWVEL+ YAA   RA   H +Q++ GGEL T VW L+ H G+
Sbjct: 2   LLEEEEDEEKRWEVLAEVWVELLVYAAPSCRAE-AHAKQLARGGELITHVWALLTHAGI 59

Length = 59

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	464
PF13968	362	DUF4220: Domain of unknown function (DUF4220)	100.0
PF04578	59	DUF594: Protein of unknown function, DUF594; Inter	99.93

>PF13968 DUF4220: Domain of unknown function (DUF4220)

Probab=100.00  E-value=1.4e-37  Score=320.40  Aligned_cols=123  Identities=50%  Similarity=0.841  Sum_probs=115.8

Q ss_pred             HHHhhhhhhhHHHHHHHHhhhcccCCCCCCCCcchhhhHHHHHHHHhcCCCceeecccchhHHHHHHHHHHHHhhhheee
Q 046032           51 IWSAYFLADSAATFAIGLIAERAINSQTPTKSNELLVLWAPFLLLHLGGPDTITAVALEDNELWLRQLFGLIFQAGFTFY  130 (464)
Q Consensus        51 ~W~aY~~ad~~a~yalG~ls~~~~~~~~~~~~~~l~~~WApfLLlhLGg~DtITAysleDn~lW~RhlL~l~~Qv~~~~y  130 (464)
                      +|+||++||++|+||||+||+++.     +.+++|++|||||||+||||||||||||+||||+|+||++++++|+++++|
T Consensus         1 lWlay~~sd~~a~Y~LG~l~~~~~-----~~~~~l~~~WAp~LLlhlgg~d~itaysleDn~lw~R~ll~ll~qv~~a~Y   75 (362)
T PF13968_consen    1 LWLAYLLSDSLATYALGLLQSSSS-----PFKSQLFPFWAPFLLLHLGGQDTITAYSLEDNELWLRHLLTLLVQVIWALY   75 (362)
T ss_pred             CchHHhhhHHHHHHHHHHHhcCCC-----CCCcchhhhHHHHHHHHhCCCcceeeeecccchHHHHHHHHHHHHhhhhhe
Confidence            699999999999999999999862     268999999999999999999999999999999999999999999999999


Q ss_pred             EEEeccCCCcchHHHHHHHHHHHHhhhhhHHHHHhhChhhhhhhhHHH
Q 046032          131 VFLLSLPGNKLFVPTILVFIAGIIKCFERTRAMYLASWEKFRESTIIE  178 (464)
Q Consensus       131 v~~~s~~~~~l~~~~~~~f~~gi~Ky~er~~al~~as~~~~~~s~~~~  178 (464)
                      |++++|+|+.+.+|+++||++|++||+||+||+++||.+.+++++..+
T Consensus        76 v~~~~~~g~~l~~~~~lLfv~gi~K~~eR~~AL~~As~~~i~~s~~~~  123 (362)
T PF13968_consen   76 VFYKSWSGSRLLAPAILLFVVGIIKYGERIWALRRASSRSIRSSMMGE  123 (362)
T ss_pred             eeeeecccchHHHHHHHHHHHHHHHHHHHHHHHHccchhhhHHhhhhh
Confidence            999999887899999999999999999999999999998888776543

>PF04578 DUF594: Protein of unknown function, DUF594; InterPro: IPR007658 This is a family of uncharacterised proteins

Probab=99.93  E-value=2.4e-26  Score=176.54  Aligned_cols=58  Identities=38%  Similarity=0.834  Sum_probs=52.9

Q ss_pred             HhccccCchhHHHHHHHHHHHHhhHhccCCccchhHHHHhccCcchHHHHHHHHHhcCC
Q 046032          399 LQSLDYLKDKKWEIVSKVWVELMSYAACHSRATRTHVEQVSNGGELFTFVWVLMAHFGL  457 (464)
Q Consensus       399 L~~~~~~~~~~W~~i~~vWvEmL~YaA~~c~~~~~HAkqL~~GGEllT~VWlL~~H~Gi  457 (464)
                      |++...+++++|++|++||+|||||+||+|+++ +|||||++|||||||||+|++|+||
T Consensus         2 L~~~~~~~~~~w~~l~~vWvemL~y~A~~c~~~-~Ha~~L~~GGE~iT~vW~L~~H~Gi   59 (59)
T PF04578_consen    2 LLEEEEDEEDRWKVLADVWVEMLCYAAPSCSAE-SHAKQLSSGGEFITHVWLLLTHAGI   59 (59)
T ss_pred             hhhHccChhHHHHHHHHHHHHHHHHHhccCCHH-HHHHHHccCchHHHHHHHHHHhcCC
Confidence            443333678999999999999999999999999 9999999999999999999999997

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	464
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 2e-06
 Identities = 70/432 (16%), Positives = 142/432 (32%), Gaps = 102/432 (23%)

Query: 15  NWNIRGVILFSLLLQTVLILLAPLR--KGMGYK--LIILL-IWSA----YF------LA- 58
           NW  R     ++ L+   I     R  K   Y+  L++LL + +A     F      L  
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT 271

Query: 59  --DSAATFAIGLIAERAINSQ------TPTKSNELLVLWAPFLLLHLGGPDTITAVALED 110
                 T  +       I+        TP +   LL+ +     L    P  +    L  
Sbjct: 272 TRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY-----LDCR-PQDLPREVLTT 325

Query: 111 NELWLRQLFGLIFQAGFTFYVFLLSLPGNKLFVPTILVFIAGIIKCFERT--RAMY--LA 166
           N   L  +     + G   +     +  +KL        I   +   E    R M+  L+
Sbjct: 326 NPRRL-SIIAESIRDGLATWDNWKHVNCDKL-----TTIIESSLNVLEPAEYRKMFDRLS 379

Query: 167 SWEKFRESTIIELA-------KDVKVNQADFANEIRIKTSLSQEPLTKELWVFIFN---E 216
               F  S  I            +K +     N++   + + ++P  KE  + I +   E
Sbjct: 380 V---FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQP--KESTISIPSIYLE 434

Query: 217 IKRKSKNGDEIRRK-TESGQDPEINDPEVGTIKIPNFEYDLEADIRKGLRKLFSAKGDCT 275
           +K K +N   + R   +    P+  D +   I     +Y             +S  G   
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSD-DLIPPYLDQY------------FYSHIGH-H 480

Query: 276 LKEMDTNCDLIQFVEKV--NFSF-GKSIIFWHIATEFLYEKTAKEAISDEETY------N 326
           LK ++ + + +     V  +F F  + I   H +T +    +    +   + Y      N
Sbjct: 481 LKNIE-HPERMTLFRMVFLDFRFLEQKIR--HDSTAWNASGSILNTLQQLKFYKPYICDN 537

Query: 327 AREFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKISPATRAKLNSSVNS 386
             ++ ++++  + +L  ++  ++ SK         D  +     +         + ++  
Sbjct: 538 DPKYERLVNAILDFLPKIEENLICSKY-------TDLLRIALMAE---------DEAI-- 579

Query: 387 MPLDQAKRMVDR 398
              ++A + V R
Sbjct: 580 --FEEAHKQVQR 589

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.4 bits (109), Expect = 2e-05
 Identities = 46/267 (17%), Positives = 87/267 (32%), Gaps = 68/267 (25%)

Query: 212 FIFNEIKRKSKNGDEIRRKTESGQDPEINDPEV---GTIKIPNFEYDLEADIRKGLRKLF 268
           F+ + IK + +    + R     +D   ND +V     +            +R+ L +L 
Sbjct: 93  FLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL----QPYLKLRQALLELR 148

Query: 269 SAKGDCTLKEMDTNCDLIQFVEKVNFSFGKSIIFWHIATEFLYEKTAKEAISDEETYNAR 328
            AK    +  +                 GK+ +             A +     +     
Sbjct: 149 PAKN-VLIDGV--------------LGSGKTWV-------------ALDVCLSYKVQCKM 180

Query: 329 EFSKILSDYMLYLLVLKPTMLNSKENVGLETLRDEAKFCFQGKISPATRAKLNSSVN-SM 387
           +F       + +L +      NS E V LE L    K  +Q  I P   ++ + S N  +
Sbjct: 181 DFK------IFWLNLKN---CNSPETV-LEML---QKLLYQ--IDPNWTSRSDHSSNIKL 225

Query: 388 PLDQAKRMVDRLQSLDYLKDKKWE----IVSKVW----VELMSYAACHSRATRTHVEQVS 439
            +   +     L+ L  LK K +E    ++  V         +  +C    T T  +QV+
Sbjct: 226 RIHSIQ---AELRRL--LKSKPYENCLLVLLNVQNAKAWNAFNL-SCKILLT-TRFKQVT 278

Query: 440 NGGELFTFVWVLMAHF--GLLEPKSED 464
           +     T   + + H    L   + + 
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDEVKS 305

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00