Citrus Sinensis ID: 046219

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140----
Protein Sequence
MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVTNTFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDLKDWSLVQEHVLKGE
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHcccccccccccHHHccccccccccccccccHHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccHHHHHHHccccccHHHHHHHHHcccHHHHHHcccccHHHHHHHcccccc
Coil and Loop (DISEMBL)
MGFAAVFCSAYVqmhdgsacqktlemplLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVTNTFvgkkvsqnrlHDYSYWLQNRLADGKNWQEIRSCLADanvcrnlgnkdlkdwSLVQEHVLKGE
Flexible Loop (DISEMBL)
MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVTNTfvgkkvsqnrLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLgnkdlkdwslvqehvlkge
Low Complexity Region (SEG)
MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVTNTFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDLKDWSLVQEHVLKGE
Disordered region (IsUnstruct)
**FAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVTNTFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDLKDWSLVQE******
Disordered Region (DISOPRED)
MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVTNTFV**KV*QNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDLKDWSLVQEHVL***
Disordered Region (DISEMBL)
MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVTNTFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDLKDWSLVQEHVLKGE
Disordered Region (DISPRO)
MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVTNTFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDLKDWSLVQEHVL***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVTNTFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDLKDWSLVQEHVLKGE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	144	2.2.26 [Sep-21-2011]
Q8S8Q6	273	Tetraspanin-8 OS=Arabidop	yes	no	0.902	0.476	0.401	1e-24
Q9M0B7	272	Tetraspanin-9 OS=Arabidop	no	no	0.798	0.422	0.408	2e-22
Q9SUD4	263	Tetraspanin-7 OS=Arabidop	no	no	0.75	0.410	0.442	6e-21
Q9LPR6	271	Tetraspanin-11 OS=Arabido	no	no	0.875	0.464	0.390	3e-19
Q9M1E7	285	Tetraspanin-3 OS=Arabidop	no	no	0.777	0.392	0.394	8e-18
F4I214	284	Tetraspanin-10 OS=Arabido	no	no	0.881	0.447	0.338	2e-17
Q9C7C1	282	Tetraspanin-6 OS=Arabidop	no	no	0.812	0.414	0.368	9e-17
Q9LSS4	327	Tetraspanin-4 OS=Arabidop	no	no	0.798	0.351	0.363	1e-15
Q9FN51	264	Tetraspanin-12 OS=Arabido	no	no	0.902	0.492	0.370	7e-15
Q84WF6	281	Tetraspanin-5 OS=Arabidop	no	no	0.756	0.387	0.377	1e-11

>sp|Q8S8Q6|TET8_ARATH Tetraspanin-8 OS=Arabidopsis thaliana GN=TET8 PE=2 SV=1

 Score =  112 bits (279), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 55/137 (40%), Positives = 84/137 (61%), Gaps = 7/137 (5%)

Query: 11  YVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIA 70
           ++     + C++ L+ P++  G+FL++V+  GL+G+CCR  WLL +YLFVM + IL +  
Sbjct: 29  WLSQKGSTECERFLDKPVIALGVFLMVVAIAGLIGSCCRVTWLLWVYLFVMFLLILLVFC 88

Query: 71  FTVFVLIVTN-----TFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNL 125
            TVF  +VTN        GK   + +L DYS WLQ R+ +GKNW +IRSCL ++ VC  L
Sbjct: 89  ITVFAFVVTNKGAGEAIEGKGYKEYKLGDYSTWLQKRVENGKNWNKIRSCLVESKVCSKL 148

Query: 126 GNK--DLKDWSLVQEHV 140
             K  ++   S  +EH+
Sbjct: 149 EAKFVNVPVNSFYKEHL 165

May be involved in the regulation of cell differentiation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9M0B7|TET9_ARATH Tetraspanin-9 OS=Arabidopsis thaliana GN=TET9 PE=2 SV=1

 Score =  104 bits (259), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 49/120 (40%), Positives = 75/120 (62%), Gaps = 5/120 (4%)

Query: 11  YVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIA 70
           ++ +   + C++ L+ P++  G+FL+I++  G+VG+CCR  WLL  YLFVM   IL ++ 
Sbjct: 29  WLSLKATTQCERFLDKPMIALGVFLMIIAIAGVVGSCCRVTWLLWSYLFVMFFLILIVLC 88

Query: 71  FTVFVLIVTN-----TFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNL 125
           FT+F  +VT+     T  GK   + RL  YS WLQ R+ + K+W  IRSCL ++  C NL
Sbjct: 89  FTIFAFVVTSKGSGETIQGKAYKEYRLEAYSDWLQRRVNNAKHWNSIRSCLYESKFCYNL 148

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SUD4|TET7_ARATH Tetraspanin-7 OS=Arabidopsis thaliana GN=TET7 PE=2 SV=1

 Score = 99.4 bits (246), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 5/113 (4%)

Query: 15  HDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVF 74
           +  + C++ L+ P++V G+FL+ VS  GLVGACCR   LL +YLF M + IL    FT+F
Sbjct: 33  NAATECERFLDKPMVVLGIFLMFVSIAGLVGACCRVSCLLWLYLFAMFLLILLGFCFTIF 92

Query: 75  VLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSCLADANVC 122
              VTN   G+ +S     +  + DYS WLQ R+ + KNW+ IRSCL  ++VC
Sbjct: 93  AFAVTNRGAGEVISDRGYKEYHVADYSNWLQKRVNNAKNWERIRSCLMYSDVC 145

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LPR6|TET11_ARATH Tetraspanin-11 OS=Arabidopsis thaliana GN=TET11 PE=2 SV=1

 Score = 93.6 bits (231), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 52/133 (39%), Positives = 81/133 (60%), Gaps = 7/133 (5%)

Query: 1   MGFAAVFCSAYVQMHDG-SACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLF 59
           +G +A+  S Y+ +H G + C+  + +PLL TGL L +VS LG++G+C + +  +  YL 
Sbjct: 19  VGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVIGSCFKENLAMVSYLI 78

Query: 60  VMLISILGLIAFTVFVLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRS 114
           ++   I+ L+ F++F+  VTN   G+ VS     + R  D+S WL N    GK W  IRS
Sbjct: 79  ILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWL-NGFVGGKRWVGIRS 137

Query: 115 CLADANVCRNLGN 127
           CLA+ANVC +L +
Sbjct: 138 CLAEANVCDDLSD 150

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9M1E7|TET3_ARATH Tetraspanin-3 OS=Arabidopsis thaliana GN=TET3 PE=2 SV=1

 Score = 89.0 bits (219), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 70/119 (58%), Gaps = 7/119 (5%)

Query: 16  DGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFV 75
           + + C + L+ PL+V G+ +++VS  G  GAC R  +L+ +YL VML+ I  LI F +F 
Sbjct: 34  NSTDCLRFLQWPLIVIGISIMVVSLAGFAGACYRNKFLMWLYLVVMLLIIAALIGFIIFA 93

Query: 76  LIVTNTFVGKKVSQNR------LHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNK 128
             VT+   G+ V  NR      L DYS WL++R++D   W +I SCL D+  CR +G  
Sbjct: 94  YAVTDKGSGRTV-LNRGYLDYYLEDYSGWLKDRVSDDSYWGKISSCLRDSGACRKIGRN 151

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|F4I214|TET10_ARATH Tetraspanin-10 OS=Arabidopsis thaliana GN=TET10 PE=2 SV=1

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 6/133 (4%)

Query: 1   MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFV 60
           +  A +    ++  H+   C+++L  P++  G F+ ++S +G +GAC R+  LL IYL V
Sbjct: 20  LAVAVIIFGVWMSTHN-DGCRRSLTFPVIALGGFIFLISIIGFLGACKRSVALLWIYLAV 78

Query: 61  MLISILGLIAFTVFVLIVTN-----TFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSC 115
           +LI ++ ++ FTV   IVTN     T  G +  + +L+DYS W   +L +  NW  ++SC
Sbjct: 79  LLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSWFLKQLNNTSNWIRLKSC 138

Query: 116 LADANVCRNLGNK 128
           L  +  CR L  K
Sbjct: 139 LVKSEQCRKLSKK 151

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9C7C1|TET6_ARATH Tetraspanin-6 OS=Arabidopsis thaliana GN=TET6 PE=2 SV=1

 Score = 85.5 bits (210), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 5/122 (4%)

Query: 9   SAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGL 68
           +A  +    + C+  L+ PLLV G  +LIVS  G +GAC    W L +YL VM+  I  L
Sbjct: 26  TALYKARSSTTCENFLQTPLLVIGFIILIVSLAGFIGACFNVAWALWVYLVVMIFLIATL 85

Query: 69  IAFTVFVLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCR 123
           +  T+F L+VT+   G +V      + RL DY  WL+ R+ D + W  IRSC+  +  C 
Sbjct: 86  MGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWLRERVRDPEYWNSIRSCILSSKTCT 145

Query: 124 NL 125
            +
Sbjct: 146 KI 147

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSS4|TET4_ARATH Tetraspanin-4 OS=Arabidopsis thaliana GN=TET4 PE=3 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 75/121 (61%), Gaps = 6/121 (4%)

Query: 16  DGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFV 75
           + + C + L+ PL++ G+ ++++S  G+ GAC +  +L+ +YLF M   I  LI FT+F 
Sbjct: 34  NSTDCLRFLQWPLIIIGISIMVISLAGIAGACYQNKFLMWLYLFTMFFVIAALIGFTIFA 93

Query: 76  LIVTNTFVGKKVSQNR-----LHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDL 130
            +VT+   G+ V   R     L+DYS WL++R+ D   W++I SC+ D+ VC+ +G +DL
Sbjct: 94  YVVTDKGSGRFVMNRRYLDYYLNDYSGWLKDRVTDNGYWRDIGSCVRDSGVCKKIG-RDL 152

Query: 131 K 131
            
Sbjct: 153 N 153

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FN51|TET12_ARATH Tetraspanin-12 OS=Arabidopsis thaliana GN=TET12 PE=2 SV=1

 Score = 79.3 bits (194), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 5/135 (3%)

Query: 1   MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFV 60
           +G AA+  S YV +   S CQ+ ++ PL+VT   L  +S+LGL+ A   +  ++ +YLF 
Sbjct: 19  IGLAALSFSVYVYVQGPSQCQRFVQNPLIVTAALLFFISSLGLIAALYGSHIIITLYLFF 78

Query: 61  MLISILGLIAFTVFVLIVTNTFVGKKVSQN-----RLHDYSYWLQNRLADGKNWQEIRSC 115
           + +SIL L+  +VF+ +VTN   GK +S       +  DY  W+ N    GKNW+ I  C
Sbjct: 79  LFLSILLLLVLSVFIFLVTNPTAGKALSGRGIGNVKTGDYQNWIGNHFLRGKNWEGITKC 138

Query: 116 LADANVCRNLGNKDL 130
           L+D+ VC+  G +D+
Sbjct: 139 LSDSRVCKRFGPRDI 153

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

>sp|Q84WF6|TET5_ARATH Tetraspanin-5 OS=Arabidopsis thaliana GN=TET5 PE=2 SV=1

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 5/114 (4%)

Query: 18  SACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLI 77
           + C+  L+ PLL+ GL +LI+S  GLVGACC   W+L +YLF M+  I+ L+  T+F  I
Sbjct: 35  TTCEHFLQKPLLILGLAILILSVAGLVGACCDVAWVLWVYLFFMVFIIVALMGLTLFGFI 94

Query: 78  VTN-----TFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLG 126
           VT+        G+   + +L  Y  WL+ R+ D   W  I++CL  +  C  L 
Sbjct: 95  VTSHSGGVVVDGRVYKEFKLEAYHPWLKTRVVDTNYWVTIKTCLLGSVTCSKLA 148

May be involved in the regulation of cell differentiation.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
356564956	274	PREDICTED: uncharacterized protein LOC10	0.965	0.507	0.475	7e-29
449487048	261	PREDICTED: uncharacterized LOC101205414	0.847	0.467	0.496	3e-28
449439675	269	PREDICTED: uncharacterized protein LOC10	0.847	0.453	0.496	3e-28
449441109	276	PREDICTED: uncharacterized protein LOC10	0.916	0.478	0.459	6e-28
225455786	307	PREDICTED: uncharacterized protein LOC10	0.909	0.426	0.481	4e-27
242044742	271	hypothetical protein SORBIDRAFT_02g02518	0.812	0.431	0.5	6e-27
255574603	271	conserved hypothetical protein [Ricinus	0.847	0.450	0.472	1e-25
414885541	211	TPA: hypothetical protein ZEAMMB73_72748	0.791	0.540	0.495	4e-25
162460977	273	senescence-associated protein DH [Zea ma	0.791	0.417	0.495	9e-25
116784294	269	unknown [Picea sitchensis]	0.777	0.416	0.478	3e-24

>gi|356564956|ref|XP_003550711.1| PREDICTED: uncharacterized protein LOC100815322 [Glycine max]

 Score =  132 bits (331), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 69/145 (47%), Positives = 98/145 (67%), Gaps = 6/145 (4%)

Query: 1   MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFV 60
           +G AAV  SAY+ +  GS CQK L++PLLV G+F+++VS LG+VG+ CR +  L  YL V
Sbjct: 19  LGIAAVGSSAYIHVRGGSDCQKVLQVPLLVGGIFVVLVSALGIVGSLCRVNGALYAYLLV 78

Query: 61  MLISILGLIAFTVFVLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSC 115
             + I+GL  FTVF L VTN  VG++VS     + R+ D+S+WLQ  + + KNW E++SC
Sbjct: 79  TFMVIVGLAFFTVFALFVTNRKVGQRVSGKGYGEYRVADFSHWLQRYVVNNKNWDEVKSC 138

Query: 116 LADANVCRNLG-NKDLKDWSLVQEH 139
           L DA+VC+NL  N    + SL+ +H
Sbjct: 139 LMDAHVCQNLALNGGRNNDSLIFKH 163

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449487048|ref|XP_004157479.1| PREDICTED: uncharacterized LOC101205414 [Cucumis sativus]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/127 (49%), Positives = 87/127 (68%), Gaps = 5/127 (3%)

Query: 5   AVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLIS 64
           A+  +  V+ H GSACQK L+ P+L  G+F  +VS LGL+G+CCR + +L +YL VM   
Sbjct: 15  AILAAVQVRNHGGSACQKFLQDPILTVGIFFFVVSLLGLIGSCCRLNSILYLYLIVMFFM 74

Query: 65  ILGLIAFTVFVLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSCLADA 119
           ILGL+AFT+F L+VTN  +G+ VS     + RL DYS+WLQN +    NW+ IRSCL D+
Sbjct: 75  ILGLMAFTIFSLLVTNKGIGQAVSGRGYKEYRLGDYSHWLQNYVVSHDNWRRIRSCLVDS 134

Query: 120 NVCRNLG 126
            +CR+L 
Sbjct: 135 PICRSLA 141

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449439675|ref|XP_004137611.1| PREDICTED: uncharacterized protein LOC101205414 [Cucumis sativus]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 63/127 (49%), Positives = 87/127 (68%), Gaps = 5/127 (3%)

Query: 5   AVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLIS 64
           A+  +  V+ H GSACQK L+ P+L  G+F  +VS LGL+G+CCR + +L +YL VM   
Sbjct: 23  AILAAVQVRNHGGSACQKFLQDPILTVGIFFFVVSLLGLIGSCCRLNSILYLYLIVMFFM 82

Query: 65  ILGLIAFTVFVLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSCLADA 119
           ILGL+AFT+F L+VTN  +G+ VS     + RL DYS+WLQN +    NW+ IRSCL D+
Sbjct: 83  ILGLMAFTIFSLLVTNKGIGQAVSGRGYKEYRLGDYSHWLQNYVVSHDNWRRIRSCLVDS 142

Query: 120 NVCRNLG 126
            +CR+L 
Sbjct: 143 PICRSLA 149

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441109|ref|XP_004138326.1| PREDICTED: uncharacterized protein LOC101219876 [Cucumis sativus] gi|449525101|ref|XP_004169558.1| PREDICTED: uncharacterized protein LOC101226847 [Cucumis sativus]

 Score =  128 bits (322), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 63/137 (45%), Positives = 92/137 (67%), Gaps = 5/137 (3%)

Query: 1   MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFV 60
           +G   +  S Y ++   S CQK ++ PLL+ G+FL +VS LGLVG+ CR +++L +YL V
Sbjct: 19  LGLIGIAASLYFRIRGSSDCQKVIQDPLLILGIFLFVVSLLGLVGSFCRLNFILYLYLIV 78

Query: 61  MLISILGLIAFTVFVLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSC 115
           + + ILG++AFT+F ++VTN  VG+ VS     + RL DYS WLQ  + + KNW EIRSC
Sbjct: 79  LFLLILGVLAFTIFTILVTNKGVGRTVSGKGYKEYRLGDYSNWLQKYVVNRKNWNEIRSC 138

Query: 116 LADANVCRNLGNKDLKD 132
           L DA +C +LGN ++  
Sbjct: 139 LIDAKICESLGNDNIPQ 155

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225455786|ref|XP_002274364.1| PREDICTED: uncharacterized protein LOC100250886 [Vitis vinifera]

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 66/137 (48%), Positives = 89/137 (64%), Gaps = 6/137 (4%)

Query: 1   MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFV 60
           +  A++    Y   + G+ CQK L+MPLLV G FL +VS  GLVG+ C+  +LL IYLFV
Sbjct: 19  IAVASLAAGIYFNFNGGTHCQKFLQMPLLVVGAFLFVVSLCGLVGSTCKVSFLLWIYLFV 78

Query: 61  MLISILGLIAFTVFVLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSC 115
           M + ILGL+ FT+  L+VTN  VG+ +S     + RL DYS WLQN L + KNW  I+SC
Sbjct: 79  MFLMILGLLCFTILALVVTNKGVGQVISNRGYKEYRLGDYSNWLQNHLVNDKNWGRIKSC 138

Query: 116 LADANVCRNLGNKDLKD 132
           L D ++C  LG K++ D
Sbjct: 139 LMDTDICSRLG-KEIND 154

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242044742|ref|XP_002460242.1| hypothetical protein SORBIDRAFT_02g025180 [Sorghum bicolor] gi|241923619|gb|EER96763.1| hypothetical protein SORBIDRAFT_02g025180 [Sorghum bicolor]

 Score =  125 bits (314), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 61/122 (50%), Positives = 80/122 (65%), Gaps = 5/122 (4%)

Query: 13  QMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFT 72
           Q  DG+ C++ L  P++  G+FLL+VS  GLVGACCR  WLL +YL  M + IL L  FT
Sbjct: 33  QRADGTECERYLSAPVIAVGVFLLVVSLAGLVGACCRVTWLLWVYLLAMFVLILVLFCFT 92

Query: 73  VFVLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGN 127
           VF  +VTN   G+ VS     + RL DYS WLQ R+ + KNW +IRSCL D+ VC+ L +
Sbjct: 93  VFAFVVTNKGAGEAVSGRGYKEYRLGDYSNWLQKRVENTKNWDKIRSCLEDSKVCKKLQD 152

Query: 128 KD 129
           K+
Sbjct: 153 KN 154

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574603|ref|XP_002528212.1| conserved hypothetical protein [Ricinus communis] gi|223532373|gb|EEF34169.1| conserved hypothetical protein [Ricinus communis]

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 60/127 (47%), Positives = 84/127 (66%), Gaps = 5/127 (3%)

Query: 11  YVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIA 70
           +++ H  S C++ L+ P++V G+FL++VS  GLVGACCR  WLL +YL VM I I+ L  
Sbjct: 29  WLRNHGTSECERFLDTPVIVLGVFLMLVSLAGLVGACCRVSWLLWLYLLVMFILIVLLFC 88

Query: 71  FTVFVLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNL 125
           FT+F  +VTN   G+ +S     + RL DYS WLQ R+ + KNW +I+SCLAD+ VC + 
Sbjct: 89  FTIFAFVVTNKGAGQVLSGRGYKEYRLGDYSNWLQKRVNNTKNWNKIKSCLADSKVCSDF 148

Query: 126 GNKDLKD 132
             K L D
Sbjct: 149 NQKYLND 155

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|414885541|tpg|DAA61555.1| TPA: hypothetical protein ZEAMMB73_727484 [Zea mays]

 Score =  119 bits (298), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 76/119 (63%), Gaps = 5/119 (4%)

Query: 16  DGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFV 75
           DG+ C++ L  P++  G FLL VS  GLVGACCR  WLL  YL  M + IL L  FTVF 
Sbjct: 36  DGTECERYLSAPVIALGAFLLAVSLAGLVGACCRVTWLLWAYLLAMFVLILVLFCFTVFA 95

Query: 76  LIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKD 129
            +VTN   G+ VS     + RL DYS WLQ R+ + +NW  IRSCL D+ VC++L +K+
Sbjct: 96  FVVTNRGAGEAVSGRGYKEYRLGDYSNWLQKRVENTRNWDRIRSCLQDSKVCKSLQDKN 154

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|162460977|ref|NP_001105285.1| senescence-associated protein DH [Zea mays] gi|54208706|gb|AAV31120.1| senescence-associated protein DH [Zea mays] gi|194700856|gb|ACF84512.1| unknown [Zea mays] gi|195639304|gb|ACG39120.1| senescence-associated protein DH [Zea mays] gi|414885540|tpg|DAA61554.1| TPA: Senescence-associated protein DH [Zea mays]

 Score =  118 bits (295), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 59/119 (49%), Positives = 76/119 (63%), Gaps = 5/119 (4%)

Query: 16  DGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFV 75
           DG+ C++ L  P++  G FLL VS  GLVGACCR  WLL  YL  M + IL L  FTVF 
Sbjct: 36  DGTECERYLSAPVIALGAFLLAVSLAGLVGACCRVTWLLWAYLLAMFVLILVLFCFTVFA 95

Query: 76  LIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKD 129
            +VTN   G+ VS     + RL DYS WLQ R+ + +NW  IRSCL D+ VC++L +K+
Sbjct: 96  FVVTNRGAGEAVSGRGYKEYRLGDYSNWLQKRVENTRNWDRIRSCLQDSKVCKSLQDKN 154

Source: Zea mays

Species: Zea mays

Genus: Zea

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116784294|gb|ABK23290.1| unknown [Picea sitchensis]

 Score =  116 bits (291), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 56/117 (47%), Positives = 78/117 (66%), Gaps = 5/117 (4%)

Query: 20  CQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVT 79
           C+K LE P++  G+FL++VS  GL+GACCR  WLL +YL  M + I+ L  FTVF  +VT
Sbjct: 38  CEKFLEKPVIAIGVFLMVVSIAGLIGACCRVSWLLWVYLLAMFLLIVLLFCFTVFAFVVT 97

Query: 80  NTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDLK 131
           N  VG+ VS     + RL DYS WLQ R+ +  NW+ IRSC+ DA VC++L ++ + 
Sbjct: 98  NKGVGEVVSNRGYKEYRLGDYSNWLQKRVENTANWKRIRSCIIDAKVCKSLADESVN 154

Source: Picea sitchensis

Species: Picea sitchensis

Genus: Picea

Family: Pinaceae

Order: Coniferales

Class: Coniferopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	144
TAIR|locus:2048982	273	TET8 "AT2G23810" [Arabidopsis	0.861	0.454	0.431	2.9e-25
TAIR|locus:2118696	272	TET9 "AT4G30430" [Arabidopsis	0.736	0.389	0.441	6.1e-23
TAIR|locus:2132992	263	TET7 "AT4G28050" [Arabidopsis	0.715	0.391	0.472	5.5e-22
TAIR|locus:2178327	264	TET12 "AT5G23030" [Arabidopsis	0.902	0.492	0.370	5.5e-22
TAIR|locus:2014054	271	TET11 "AT1G18520" [Arabidopsis	0.875	0.464	0.390	3.9e-21
TAIR|locus:2144050	327	TET4 "tetraspanin4" [Arabidops	0.763	0.336	0.379	7.2e-20
TAIR|locus:2085692	285	TET3 "AT3G45600" [Arabidopsis	0.736	0.371	0.415	8.3e-19
TAIR|locus:2038488	284	TET10 "tetraspanin10" [Arabido	0.881	0.447	0.338	8.3e-19
TAIR|locus:2099272	282	TET6 "AT3G12090" [Arabidopsis	0.812	0.414	0.368	5.8e-18
TAIR|locus:2050354	270	TET2 "AT2G19580" [Arabidopsis	0.756	0.403	0.359	2e-15

TAIR|locus:2048982 TET8 "AT2G23810" [Arabidopsis thaliana (taxid:3702)]

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 57/132 (43%), Positives = 83/132 (62%)

Query:    17 GSA-CQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFV 75
             GS  C++ L+ P++  G+FL++V+  GL+G+CCR  WLL +YLFVM + IL +   TVF 
Sbjct:    34 GSTECERFLDKPVIALGVFLMVVAIAGLIGSCCRVTWLLWVYLFVMFLLILLVFCITVFA 93

Query:    76 LIVTN-----TFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNK-- 128
              +VTN        GK   + +L DYS WLQ R+ +GKNW +IRSCL ++ VC  L  K  
Sbjct:    94 FVVTNKGAGEAIEGKGYKEYKLGDYSTWLQKRVENGKNWNKIRSCLVESKVCSKLEAKFV 153

Query:   129 DLKDWSLVQEHV 140
             ++   S  +EH+
Sbjct:   154 NVPVNSFYKEHL 165

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009611 "response to wounding" evidence=RCA

GO:0009612 "response to mechanical stimulus" evidence=RCA

GO:0009693 "ethylene biosynthetic process" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2118696 TET9 "AT4G30430" [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 6.1e-23, P = 6.1e-23
 Identities = 49/111 (44%), Positives = 71/111 (63%)

Query:    20 CQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVT 79
             C++ L+ P++  G+FL+I++  G+VG+CCR  WLL  YLFVM   IL ++ FT+F  +VT
Sbjct:    38 CERFLDKPMIALGVFLMIIAIAGVVGSCCRVTWLLWSYLFVMFFLILIVLCFTIFAFVVT 97

Query:    80 N-----TFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNL 125
             +     T  GK   + RL  YS WLQ R+ + K+W  IRSCL ++  C NL
Sbjct:    98 SKGSGETIQGKAYKEYRLEAYSDWLQRRVNNAKHWNSIRSCLYESKFCYNL 148

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2132992 TET7 "AT4G28050" [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 51/108 (47%), Positives = 68/108 (62%)

Query:    20 CQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVT 79
             C++ L+ P++V G+FL+ VS  GLVGACCR   LL +YLF M + IL    FT+F   VT
Sbjct:    38 CERFLDKPMVVLGIFLMFVSIAGLVGACCRVSCLLWLYLFAMFLLILLGFCFTIFAFAVT 97

Query:    80 NTFVGKKVSQN---RLH--DYSYWLQNRLADGKNWQEIRSCLADANVC 122
             N   G+ +S       H  DYS WLQ R+ + KNW+ IRSCL  ++VC
Sbjct:    98 NRGAGEVISDRGYKEYHVADYSNWLQKRVNNAKNWERIRSCLMYSDVC 145

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009506 "plasmodesma" evidence=IDA

GO:0007020 "microtubule nucleation" evidence=RCA

TAIR|locus:2178327 TET12 "AT5G23030" [Arabidopsis thaliana (taxid:3702)]

 Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
 Identities = 50/135 (37%), Positives = 79/135 (58%)

Query:     1 MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFV 60
             +G AA+  S YV +   S CQ+ ++ PL+VT   L  +S+LGL+ A   +  ++ +YLF 
Sbjct:    19 IGLAALSFSVYVYVQGPSQCQRFVQNPLIVTAALLFFISSLGLIAALYGSHIIITLYLFF 78

Query:    61 MLISILGLIAFTVFVLIVTNTFVGKKVSQN-----RLHDYSYWLQNRLADGKNWQEIRSC 115
             + +SIL L+  +VF+ +VTN   GK +S       +  DY  W+ N    GKNW+ I  C
Sbjct:    79 LFLSILLLLVLSVFIFLVTNPTAGKALSGRGIGNVKTGDYQNWIGNHFLRGKNWEGITKC 138

Query:   116 LADANVCRNLGNKDL 130
             L+D+ VC+  G +D+
Sbjct:   139 LSDSRVCKRFGPRDI 153

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2014054 TET11 "AT1G18520" [Arabidopsis thaliana (taxid:3702)]

 Score = 248 (92.4 bits), Expect = 3.9e-21, P = 3.9e-21
 Identities = 52/133 (39%), Positives = 81/133 (60%)

Query:     1 MGFAAVFCSAYVQMHDG-SACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLF 59
             +G +A+  S Y+ +H G + C+  + +PLL TGL L +VS LG++G+C + +  +  YL 
Sbjct:    19 VGASAIGYSIYMFVHQGVTDCESAIRIPLLTTGLILFLVSLLGVIGSCFKENLAMVSYLI 78

Query:    60 VMLISILGLIAFTVFVLIVTNTFVGKKVS-----QNRLHDYSYWLQNRLADGKNWQEIRS 114
             ++   I+ L+ F++F+  VTN   G+ VS     + R  D+S WL N    GK W  IRS
Sbjct:    79 ILFGGIVALMIFSIFLFFVTNKGAGRVVSGRGYKEYRTVDFSTWL-NGFVGGKRWVGIRS 137

Query:   115 CLADANVCRNLGN 127
             CLA+ANVC +L +
Sbjct:   138 CLAEANVCDDLSD 150

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2144050 TET4 "tetraspanin4" [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
 Identities = 44/116 (37%), Positives = 73/116 (62%)

Query:    20 CQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVT 79
             C + L+ PL++ G+ ++++S  G+ GAC +  +L+ +YLF M   I  LI FT+F  +VT
Sbjct:    38 CLRFLQWPLIIIGISIMVISLAGIAGACYQNKFLMWLYLFTMFFVIAALIGFTIFAYVVT 97

Query:    80 NTFVGKKVSQNR-----LHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDL 130
             +   G+ V   R     L+DYS WL++R+ D   W++I SC+ D+ VC+ +G +DL
Sbjct:    98 DKGSGRFVMNRRYLDYYLNDYSGWLKDRVTDNGYWRDIGSCVRDSGVCKKIG-RDL 152

GO:0005576 "extracellular region" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0009062 "fatty acid catabolic process" evidence=RCA

TAIR|locus:2085692 TET3 "AT3G45600" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 47/113 (41%), Positives = 68/113 (60%)

Query:    20 CQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVT 79
             C + L+ PL+V G+ +++VS  G  GAC R  +L+ +YL VML+ I  LI F +F   VT
Sbjct:    38 CLRFLQWPLIVIGISIMVVSLAGFAGACYRNKFLMWLYLVVMLLIIAALIGFIIFAYAVT 97

Query:    80 NTFVGKKVSQNR------LHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLG 126
             +   G+ V  NR      L DYS WL++R++D   W +I SCL D+  CR +G
Sbjct:    98 DKGSGRTVL-NRGYLDYYLEDYSGWLKDRVSDDSYWGKISSCLRDSGACRKIG 149

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2038488 TET10 "tetraspanin10" [Arabidopsis thaliana (taxid:3702)]

 Score = 226 (84.6 bits), Expect = 8.3e-19, P = 8.3e-19
 Identities = 45/133 (33%), Positives = 75/133 (56%)

Query:     1 MGFAAVFCSAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFV 60
             +  A +    ++  H+   C+++L  P++  G F+ ++S +G +GAC R+  LL IYL V
Sbjct:    20 LAVAVIIFGVWMSTHN-DGCRRSLTFPVIALGGFIFLISIIGFLGACKRSVALLWIYLAV 78

Query:    61 MLISILGLIAFTVFVLIVTN-----TFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSC 115
             +LI ++ ++ FTV   IVTN     T  G +  + +L+DYS W   +L +  NW  ++SC
Sbjct:    79 LLIVLIAILVFTVLAFIVTNNGSGHTNPGLRYKEYKLNDYSSWFLKQLNNTSNWIRLKSC 138

Query:   116 LADANVCRNLGNK 128
             L  +  CR L  K
Sbjct:   139 LVKSEQCRKLSKK 151

GO:0005576 "extracellular region" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

TAIR|locus:2099272 TET6 "AT3G12090" [Arabidopsis thaliana (taxid:3702)]

 Score = 218 (81.8 bits), Expect = 5.8e-18, P = 5.8e-18
 Identities = 45/122 (36%), Positives = 66/122 (54%)

Query:     9 SAYVQMHDGSACQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGL 68
             +A  +    + C+  L+ PLLV G  +LIVS  G +GAC    W L +YL VM+  I  L
Sbjct:    26 TALYKARSSTTCENFLQTPLLVIGFIILIVSLAGFIGACFNVAWALWVYLVVMIFLIATL 85

Query:    69 IAFTVFVLIVTNTFVGKKV-----SQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCR 123
             +  T+F L+VT+   G +V      + RL DY  WL+ R+ D + W  IRSC+  +  C 
Sbjct:    86 MGLTLFGLVVTSQGGGVEVPGRIYKEYRLGDYHPWLRERVRDPEYWNSIRSCILSSKTCT 145

Query:   124 NL 125
              +
Sbjct:   146 KI 147

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA

GO:0000041 "transition metal ion transport" evidence=RCA

TAIR|locus:2050354 TET2 "AT2G19580" [Arabidopsis thaliana (taxid:3702)]

 Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
 Identities = 41/114 (35%), Positives = 60/114 (52%)

Query:    20 CQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVT 79
             C   L  P++V G+ +L+VS  G +GA    + LL +YL  M I I  L+   +F  +VT
Sbjct:    37 CVNLLRWPVVVLGVLILVVSATGFIGAYKYKETLLAVYLCCMAILIGLLLVVLIFAFVVT 96

Query:    80 NT-----FVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNK 128
                      G+   + RL  +S WL+  + D KNW  +R+CLAD NVC  L  +
Sbjct:    97 RPDGSYRVPGRGYKEYRLEGFSNWLKENVVDSKNWGRLRACLADTNVCPKLNQE 150

GO:0003674 "molecular_function" evidence=ND

GO:0007568 "aging" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	144
pfam00335	221	pfam00335, Tetraspannin, Tetraspanin family	9e-10

>gnl|CDD|215864 pfam00335, Tetraspannin, Tetraspanin family

 Score = 54.3 bits (131), Expect = 9e-10
 Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 8/118 (6%)

Query: 20  CQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVFVLIVT 79
             + L + ++V G+ +L+V  LG  GA   +  LL  Y  ++LI  +  IA  +   +  
Sbjct: 42  SIRALYILIIVLGVIILLVGFLGCCGAIKESRCLLLTYFILLLILFILEIAAGILAFVYR 101

Query: 80  NTFVGKKVSQNRLHDYSYWLQNRLADGKNWQEIRSCLADANVCRNLGNKDLKDWSLVQ 137
           +             D SY       D  N  E    L  +  C   G     DW   Q
Sbjct: 102 DKLESSLKEGLNYKDKSYN------DDPNLTEAIDELQKSLEC--CGVNSYTDWLDSQ 151

Length = 221

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	144
KOG3882	237	consensus Tetraspanin family integral membrane pro	99.8
PF00335	221	Tetraspannin: Tetraspanin family RDS_ROM1 subfamil	99.26
cd03154	100	TM4SF3_like_LEL Tetraspanin, extracellular domain	95.58
cd03163	105	TM4SF8_like_LEL Tetraspanin, extracellular domain	94.29
cd03164	86	CD53_like_LEL Tetraspanin, extracellular domain or	93.58
cd03162	143	peripherin_like_LEL Tetraspanin, extracellular dom	93.13
cd03159	121	TM4SF9_like_LEL Tetraspanin, extracellular domain	92.14
cd03156	114	uroplakin_I_like_LEL Tetraspanin, extracellular do	92.13
cd03161	104	TM4SF2_6_like_LEL Tetraspanin, extracellular domai	91.87
cd03160	117	CD37_CD82_like_LEL Tetraspanin, extracellular doma	91.18
cd03166	99	CD63_LEL Tetraspanin, extracellular domain or larg	90.95
cd03158	119	penumbra_like_LEL Tetraspanin, extracellular domai	89.5
cd03155	110	CD151_like_LEL Tetraspanin, extracellular domain o	89.4
cd03165	98	NET-5_like_LEL Tetraspanin, extracellular domain o	89.12
KOG4433	526	consensus Tweety transmembrane/cell surface protei	84.64
cd07912	418	Tweety_N N-terminal domain of the protein encoded	83.84
cd03167	120	oculospanin_like_LEL Tetraspanin, extracellular do	81.06

>KOG3882 consensus Tetraspanin family integral membrane protein [General function prediction only]

Probab=99.80  E-value=1.7e-20  Score=148.49  Aligned_cols=112  Identities=15%  Similarity=0.214  Sum_probs=89.1

Q ss_pred             CceEeeeeeeeeeeccCcchhh----h--hhhhHHHHHHHHHHHHHhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 046219            1 MGFAAVFCSAYVQMHDGSACQK----T--LEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVF   74 (144)
Q Consensus         1 ~G~~ll~~Giw~~~~~~~~~~~----~--~~~~lI~iG~~i~iis~lGc~GA~~es~clL~~y~~~l~ii~l~el~~~i~   74 (144)
                      +|++++++|+|+..++......    +  ....+|++|.+++++||+||+||+|||+|+|.+|++++++++++|++++++
T Consensus        23 ~G~~ll~~giw~~~~~~~~~~~~~~~~~~~~~ili~~G~v~~~v~flGc~Ga~~es~~lL~~y~~~l~l~~i~e~~~~i~  102 (237)
T KOG3882|consen   23 LGLLLLAVGIWLLADKGFLSSLLESDFLVPAYILIAVGGVVFLVGFLGCCGALRESRCLLLSYFILLLLLFIAELAAGIL  102 (237)
T ss_pred             HHHHHHHhhhheeEeccchhhccccchhcchhhhhhhhHHHHHHHHhhhhhhHhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3778999999999886422111    1  233489999999999999999999999999999999999999999999999


Q ss_pred             hheEEeccc--------ccccccccccc----hhHHHhhhc-----CCCCCCccC
Q 046219           75 VLIVTNTFV--------GKKVSQNRLHD----YSYWLQNRL-----ADGKNWQEI  112 (144)
Q Consensus        75 ~~v~~~~~~--------~~~i~~Y~~~~----~~~~lQ~~~-----~~~~dW~~~  112 (144)
                      +++++++.+        .+.+++|+.++    ..|.+|+++     +||+||.+.
T Consensus       103 ~~~~~~~l~~~~~~~~~~~~~~~y~~~~~~~~~~d~~Q~~~~CCG~~~~~~~~~~  157 (237)
T KOG3882|consen  103 AFVFRDSLRDELEEQLLKSIWNNYSSDPDLGEAWDKLQRELKCCGVNGYSDYFNC  157 (237)
T ss_pred             hheeHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHhccCCcCCCchHHhcC
Confidence            999987655        22334566543    237899997     888999754

>PF00335 Tetraspannin: Tetraspanin family RDS_ROM1 subfamily; InterPro: IPR018499 A number of eukaryotic CD antigens have been shown to be related []

Probab=99.26  E-value=3.4e-13  Score=101.74  Aligned_cols=112  Identities=17%  Similarity=0.348  Sum_probs=17.9

Q ss_pred             CceEeeeeeeeee-eccCcc-----hhhhhhhhHHHHHHHHHHHHHhhhhhhhccchhHHHHHHHHHHHHHHHHHHHHhh
Q 046219            1 MGFAAVFCSAYVQ-MHDGSA-----CQKTLEMPLLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISILGLIAFTVF   74 (144)
Q Consensus         1 ~G~~ll~~Giw~~-~~~~~~-----~~~~~~~~lI~iG~~i~iis~lGc~GA~~es~clL~~y~~~l~ii~l~el~~~i~   74 (144)
                      +|++++++|+|+. .+...+     ........++.+|+++++++++|++|++++|+|++.+|.+++++++++|++++++
T Consensus        16 ~g~~li~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~G~~~~~~~~~G~~~~~~~~~~~l~~y~~~~~~~~v~~~~~~i~   95 (221)
T PF00335_consen   16 LGLALIGVGIWLLVNNQYLSEFSSSFISYVIIILIFIGIFILIISFLGCIGACRKNRCLLIIYIILLILLFVLELVVGIV   95 (221)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHHHHHHhhhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccchhhHHHHHHHHHHh
Confidence            4788899999993 222111     1112233467799999999999999999999999999999999999999999999


Q ss_pred             hheEEeccc---ccc-----cccccccch----hHHHhhhc-----CCCCCCccC
Q 046219           75 VLIVTNTFV---GKK-----VSQNRLHDY----SYWLQNRL-----ADGKNWQEI  112 (144)
Q Consensus        75 ~~v~~~~~~---~~~-----i~~Y~~~~~----~~~lQ~~~-----~~~~dW~~~  112 (144)
                      ++.++++..   .+.     .+.|..++.    .+.+|+++     ++++||...
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iq~~~~CCG~~~~~d~~~~  150 (221)
T PF00335_consen   96 AFSYRDQLNSSLKDGLSLRCMKSYNSNESFSEAWDNIQEKFECCGVNSPDDWFTS  150 (221)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHSSTT-CHHHHHHHHHHHHHT--SSTTCHHHHHH
T ss_pred             hhhccccccccccccccchhhhccccccchhhheecccccccccCCCCCcccccc
Confidence            999877554   111     112222221    15689886     689999754

CD9 (also called DRAP-27, MRP-1 or p24) upregulates HB-EGF activity as a receptor for diphtheria toxin as well as its juxtacrine activity. CD9 mAbs modulate cell adhesion and migration and trigger platelet activation that is blocked by mAbs directed to the platelet Fc receptor CD32. In mice, CD9 mAb KMC8.8 has been shown to inhibit the production of myeloid cells in vitro and has a costimulatory activity for T cells. CD9 is a type III membrane protein, with four putative transmembrane domains. CD37 (or gp52-40) is involved in signal transduction and serves as a stable marker for malignancies derived from mature B cells, like B-CLL, HCL, and all types of B-NHL. CD63 transfection reduced melanoma cell motility on fibronectin, collagen and laminin, and reduced the growth and metastasis of melanoma cells in nude mice []. CD63 has been used as a marker for late endosomes and for primary melanomas. These proteins are all type II membrane proteins: they contain an N-terminal transmembrane (TM) domain, which acts both as a signal sequence and a membrane anchor, and 3 additional TM regions (hence the name 'TM4'). The sequences contain a number of conserved cysteine residues. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0016021 integral to membrane; PDB: 1IV5_A 1G8Q_A.

>cd03154 TM4SF3_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF3_like subfamily

Probab=95.58  E-value=0.0033  Score=42.94  Aligned_cols=51  Identities=16%  Similarity=0.097  Sum_probs=31.6

Q ss_pred             HhhhheEEeccc-------cccccccccc--chh---HHHhhhc-----CCCCCCcc--C-Ccc-cCCcccc
Q 046219           72 TVFVLIVTNTFV-------GKKVSQNRLH--DYS---YWLQNRL-----ADGKNWQE--I-RSC-LADANVC  122 (144)
Q Consensus        72 ~i~~~v~~~~~~-------~~~i~~Y~~~--~~~---~~lQ~~~-----~~~~dW~~--~-~sC-~~~~~~C  122 (144)
                      ||++|+++++..       .+.+++|..+  +.+   |.+|+++     +++.||..  . .|| +.+...|
T Consensus         1 gi~~~v~r~~i~~~i~~~~~~~i~~y~~~~~~~~~~~d~lQ~~l~CCG~~~~~d~~~~~vP~SCcc~~~~~c   72 (100)
T cd03154           1 GIVGAVYKPKIENELKEKNTKLLSLLGQNAKSVKKSLEKFQKELKCCGLVNGADDWGNDIPASCNCTTTQSD   72 (100)
T ss_pred             CEEEEEeHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHcCCCCCCCCchhhccCCCCCCCcCCCCCCC
Confidence            578899987665       3455566533  222   6799998     67777753  2 477 4444344

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 3 (TM4SF3) or D6.1a and related proteins. D6.1a associates with alpha6beta4 integrin and supports cell motility, it has been ascribed a role in tumor progression and metastasis.

>cd03163 TM4SF8_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF8_like subfamily

Probab=94.29  E-value=0.012  Score=40.50  Aligned_cols=26  Identities=19%  Similarity=0.342  Sum_probs=17.6

Q ss_pred             cccccccccch----hHHHhhhc-----CCCCCCc
Q 046219           85 KKVSQNRLHDY----SYWLQNRL-----ADGKNWQ  110 (144)
Q Consensus        85 ~~i~~Y~~~~~----~~~lQ~~~-----~~~~dW~  110 (144)
                      +.+++|+.++.    .|.+|+++     ++++||.
T Consensus        18 ~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~Dw~   52 (105)
T cd03163          18 KVFNKYNGTNAESRAVDYLQRQLQCCGIHNYTDWE   52 (105)
T ss_pred             HHHHHhcCCcHHHHHHHHHHHhCcccCCCCHHHHh
Confidence            34455654322    26799997     8999995

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 8 (TM4SF8) or Tspan-3 and related proteins. Tspan-3 has been reported to form a complex with integrin beta1 and OSP/claudin-11, which may be involved in oligodendrocyte proliferation and migration.

>cd03164 CD53_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD53_Like family

Probab=93.58  E-value=0.017  Score=38.41  Aligned_cols=33  Identities=18%  Similarity=0.302  Sum_probs=21.0

Q ss_pred             ccccccccc-ch---hHHHhhhc-----CCCCCCccC--CcccC
Q 046219           85 KKVSQNRLH-DY---SYWLQNRL-----ADGKNWQEI--RSCLA  117 (144)
Q Consensus        85 ~~i~~Y~~~-~~---~~~lQ~~~-----~~~~dW~~~--~sC~~  117 (144)
                      +.+++|..+ +.   .|.+|+++     ++++||...  .||+.
T Consensus        17 ~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~Dw~~~vP~SCC~   60 (86)
T cd03164          17 DSLEQYHKDNNTSEAWDMIQSNLQCCGINGTTDWGSGVPSSCCS   60 (86)
T ss_pred             HHHHHhcCCccHHHHHHHHHHHhcCCCCCChhhhCCCCChhhcC
Confidence            445566533 22   26799997     899999652  36653

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD53 is a tetraspanin of the lymphoid-myeloid lineage and has been implicated in apoptosis protection. It associates with integrin alpha4beta1. Some of the cellular responses modulated by CD53 may be mediated by JNK activation and/or via the AKT pathway.

>cd03162 peripherin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), peripherin_like family

Probab=93.13  E-value=0.031  Score=41.81  Aligned_cols=27  Identities=15%  Similarity=0.164  Sum_probs=18.7

Q ss_pred             ccccccccccc------h---hHHHhhhc-----CCCCCCc
Q 046219           84 GKKVSQNRLHD------Y---SYWLQNRL-----ADGKNWQ  110 (144)
Q Consensus        84 ~~~i~~Y~~~~------~---~~~lQ~~~-----~~~~dW~  110 (144)
                      .+.+++|+.++      .   .|.+|+++     ++++||.
T Consensus        16 ~~~i~~Y~~~~~~~~~~~~~~~D~lQ~~fkCCG~~~y~DW~   56 (143)
T cd03162          16 KNAMKFYKDTDTPGRCFLKKTIDMLQIEFQCCGNNGYRDWF   56 (143)
T ss_pred             HHHHHHhcCCcccchhhHHHHHHHHHHhccCCCCCChhhhh
Confidence            34566676432      2   27799998     8999996

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Peripherin, or RDS (retinal degradation slow) is a glycoprotein expressed in vertebrate photoreceptors, located at the rim of the disc membranes of the photoreceptor outer segments. RDS is thought to play a major role in folding and stacking of the discs. Mutations in RDS have been linked to her

>cd03159 TM4SF9_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF9_like subfamily

Probab=92.14  E-value=0.034  Score=39.40  Aligned_cols=26  Identities=19%  Similarity=0.364  Sum_probs=17.7

Q ss_pred             ccccccccc-ch---hHHHhhhc-----CCCCCCc
Q 046219           85 KKVSQNRLH-DY---SYWLQNRL-----ADGKNWQ  110 (144)
Q Consensus        85 ~~i~~Y~~~-~~---~~~lQ~~~-----~~~~dW~  110 (144)
                      +.|++|+.+ +.   .|.+|+++     ++|+||.
T Consensus        17 ~~i~~y~~~~~~~~~~D~iQ~~l~CCG~~~~~DW~   51 (121)
T cd03159          17 NNIRAYRDDIDLQNLIDFLQEYWQCCGARGPDDWN   51 (121)
T ss_pred             HHHHHhccCHHHHHHHHHHHHhccCCCCCChHHhc
Confidence            455566532 22   26799997     8999996

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 9 (TM4SF9) or Tetraspanin-5 and related proteins. TM4SF9 is strongly expressed witin the central nervous system, and expression levels appear to correlate with differentiation status of particular neurons, hinting at a role in neuronal maturation.

>cd03156 uroplakin_I_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family

Probab=92.13  E-value=0.017  Score=39.82  Aligned_cols=15  Identities=7%  Similarity=0.107  Sum_probs=12.7

Q ss_pred             HHHhhhc-----CCCCCCcc
Q 046219           97 YWLQNRL-----ADGKNWQE  111 (144)
Q Consensus        97 ~~lQ~~~-----~~~~dW~~  111 (144)
                      |.+|+++     ++|+||..
T Consensus        36 d~iQ~~l~CCG~~~~~Dw~~   55 (114)
T cd03156          36 NRVMIELKCCGVNGPTDFVD   55 (114)
T ss_pred             HHHHhcccCcCCCCcHHHHh
Confidence            6799997     89999954

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Uroplakin Ia and Ib are components of the 16nm protein particles, which are packed hexagonally to form 2D crystals of asymmetric unit membranes, and cover the apical surface of mammalian urothelium, contributing to the urinay bladder's permeability barrier function. Uroplakins Ia and Ib are ma

>cd03161 TM4SF2_6_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), TM4SF2_6_like subfamily

Probab=91.87  E-value=0.044  Score=37.36  Aligned_cols=39  Identities=21%  Similarity=0.317  Sum_probs=23.9

Q ss_pred             ccccccccc-ch---hHHHhhhc-----CCCCCCccC---------CcccCCccccc
Q 046219           85 KKVSQNRLH-DY---SYWLQNRL-----ADGKNWQEI---------RSCLADANVCR  123 (144)
Q Consensus        85 ~~i~~Y~~~-~~---~~~lQ~~~-----~~~~dW~~~---------~sC~~~~~~C~  123 (144)
                      +.+++|..+ +.   .|.+|+++     ++++||...         .||+.....|.
T Consensus        17 ~~i~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~Dw~~~~~~~~~~vP~SCC~~~~~C~   73 (104)
T cd03161          17 EAVSNYNGDDERSDAVDTVQRTLHCCGVENYTDWLNSPYFLEKGIPLSCCKNRSDCS   73 (104)
T ss_pred             HHHHHhcCChhHHHHHHHHHhcCcCcCCCChhhhhccccccCCCcCcccccCCCCCC
Confidence            445566532 22   27799997     899999631         36765444564

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contaions transmembrane 4 superfamily 2 (TM4SF2) or Tspan-7, transmembrane 4 superfamily 6 (TM4SF6) or Tspan-6, and related proteins. TM4SF2 has been identified as involved in some forms of X-linked mental retardation.

>cd03160 CD37_CD82_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family

Probab=91.18  E-value=0.067  Score=37.48  Aligned_cols=14  Identities=21%  Similarity=0.601  Sum_probs=12.3

Q ss_pred             HHHhhhc-----CCCCCCc
Q 046219           97 YWLQNRL-----ADGKNWQ  110 (144)
Q Consensus        97 ~~lQ~~~-----~~~~dW~  110 (144)
                      |.+|+++     ++|+||.
T Consensus        37 d~iQ~~l~CCG~~~~~Dw~   55 (117)
T cd03160          37 DYVQFQLQCCGWTGPQDWT   55 (117)
T ss_pred             HHHHhhCcccCCCCchhHH
Confidence            6799997     7999996

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD37 is a leukocyte-specific protein, and its restricted expression pattern suggests a role in the immune system. A regulatory role in T-cell proliferation has been suggested. CD82 is a metastasis suppressor implicated in biological processes ranging from fusion, adhesion, and migration to apoptos

>cd03166 CD63_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD63 family

Probab=90.95  E-value=0.079  Score=35.94  Aligned_cols=27  Identities=15%  Similarity=0.377  Sum_probs=17.6

Q ss_pred             cccccccccc-h---hHHHhhhc-----CCCCCCcc
Q 046219           85 KKVSQNRLHD-Y---SYWLQNRL-----ADGKNWQE  111 (144)
Q Consensus        85 ~~i~~Y~~~~-~---~~~lQ~~~-----~~~~dW~~  111 (144)
                      +.+++|+.++ .   .|.+|+++     ++|+||.+
T Consensus        17 ~~~~~y~~~~~~~~~~d~iQ~~l~CCG~~~~~Dw~~   52 (99)
T cd03166          17 QMISNYNKTNDFRKILDRMQKDLKCCGANNYTDWEN   52 (99)
T ss_pred             HHHHHcCCCHHHHHHHHHHHHHhcccCCCChhhhhc
Confidence            3455565332 2   26799997     89999964

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD63 is present in platelets, neutrophils, and endothelial cells, amongst others. In platelets it associates with the integrin alphaIIBbeta3 and may modulate alphaIIbbeta3-dependent cytoskeletal reorganization.

>cd03158 penumbra_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), penumbra_like family

Probab=89.50  E-value=0.11  Score=36.56  Aligned_cols=14  Identities=21%  Similarity=0.672  Sum_probs=12.3

Q ss_pred             HHHhhhc-----CCCCCCc
Q 046219           97 YWLQNRL-----ADGKNWQ  110 (144)
Q Consensus        97 ~~lQ~~~-----~~~~dW~  110 (144)
                      |.+|+++     ++++||.
T Consensus        33 d~lQ~~l~CCG~~~~~Dw~   51 (119)
T cd03158          33 DFVQKEFKCCGGDDYRDWS   51 (119)
T ss_pred             HHHHHHccCCCCCChhhcc
Confidence            6799997     8999996

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". Human Penumbra exhibits growth-suppressive activity in vitro and has been associated with myeloid malignancies.

>cd03155 CD151_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), CD151_Like family

Probab=89.40  E-value=0.11  Score=35.83  Aligned_cols=15  Identities=27%  Similarity=0.501  Sum_probs=12.9

Q ss_pred             HHHhhhc-----CCCCCCcc
Q 046219           97 YWLQNRL-----ADGKNWQE  111 (144)
Q Consensus        97 ~~lQ~~~-----~~~~dW~~  111 (144)
                      |.+|+++     ++|+||..
T Consensus        36 d~iQ~~l~CCG~~~~~Dw~~   55 (110)
T cd03155          36 DELQQEFKCCGSNNYTDWQD   55 (110)
T ss_pred             HHHHHhCcCcCCCChhhhhh
Confidence            7799997     89999964

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". CD151strongly associates with integrins, especially alpha3beta1, alpha6beta1, alpha7beta1, and alpha6beta4; it may play roles in cell-cell adhesion, cell migration, platelet aggregation, and angiogenesis. For example, CD151 is is involved in regulation of migration of neutrophils, endothelial cells, and

>cd03165 NET-5_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), NET-5_like family

Probab=89.12  E-value=0.092  Score=35.41  Aligned_cols=15  Identities=20%  Similarity=0.377  Sum_probs=12.8

Q ss_pred             HHHhhhc-----CCCCCCcc
Q 046219           97 YWLQNRL-----ADGKNWQE  111 (144)
Q Consensus        97 ~~lQ~~~-----~~~~dW~~  111 (144)
                      |.+|+++     ++++||..
T Consensus        35 d~~Q~~l~CCG~~~~~Dw~~   54 (98)
T cd03165          35 DITQTEFRCCGVTNYTDWYE   54 (98)
T ss_pred             HHHHHhCcCcCCCChhHHHH
Confidence            6799997     89999964

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This sub-family contains proteins similar to human tetraspan NET-5.

>KOG4433 consensus Tweety transmembrane/cell surface protein [General function prediction only]

Probab=84.64  E-value=1.3  Score=39.36  Aligned_cols=38  Identities=21%  Similarity=0.370  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHHHHhhhhhhhccchhHHHHHHHHHHHHH
Q 046219           28 LLVTGLFLLIVSTLGLVGACCRTDWLLCIYLFVMLISI   65 (144)
Q Consensus        28 lI~iG~~i~iis~lGc~GA~~es~clL~~y~~~l~ii~   65 (144)
                      .++.=.+.+++.++++.|-.|+|||++..|..+=++++
T Consensus       213 ~v~lL~l~LvvC~v~vlglak~Skc~li~fsv~Gll~l  250 (526)
T KOG4433|consen  213 YVLLLTLLLVVCLVLVLGLAKRSKCLLIVFSVCGLLAL  250 (526)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHH
Confidence            45566778899999999999999999999987655444

>cd07912 Tweety_N N-terminal domain of the protein encoded by the Drosophila tweety gene and related proteins, a family of chloride ion channels

Probab=83.84  E-value=1.7  Score=37.95  Aligned_cols=32  Identities=25%  Similarity=0.317  Sum_probs=26.0

Q ss_pred             HHHHHHHHHHHHhhhhhhhccchhHHHHHHHH
Q 046219           29 LVTGLFLLIVSTLGLVGACCRTDWLLCIYLFV   60 (144)
Q Consensus        29 I~iG~~i~iis~lGc~GA~~es~clL~~y~~~   60 (144)
                      +++=++.+++.+++|+|..|.|||.+.++.++
T Consensus       213 l~lL~~~lviC~~~l~gl~r~Sr~~li~~s~~  244 (418)
T cd07912         213 LGLLSLLLVICLVLLVGLARHSRCLLIVFSVC  244 (418)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence            34445678899999999999999999998543

The protein product of the Drosophila tweety (tty) gene is thought to form a trans-membrane protein with five membrane-spanning regions and a cytoplasmic C-terminus. This N-terminal domain contains the putative transmembrane spanning regions. Tweety has been suggested as a candidate for a large conductance chloride channel, both in vertebrate and insect cells. Three human homologs have been identified and designated TTYH1-3. TTYH2 has been associated with the progression of cancer, and Drosophila melanogaster tweety has been assumed to play a role in development. TTYH2, and TTYH3 bind to and are ubiquinated by Nedd4-2, a HECT type E3 ubiquitin ligase, which most likely plays a role in controlling the cellular levels of tweety family proteins.

>cd03167 oculospanin_like_LEL Tetraspanin, extracellular domain or large extracellular loop (LEL), oculospanin_like family

Probab=81.06  E-value=0.47  Score=33.65  Aligned_cols=14  Identities=29%  Similarity=0.411  Sum_probs=12.4

Q ss_pred             HHHhhhc-----CCCCCCc
Q 046219           97 YWLQNRL-----ADGKNWQ  110 (144)
Q Consensus        97 ~~lQ~~~-----~~~~dW~  110 (144)
                      |++|+++     ++++||.
T Consensus        33 d~iQ~~l~CCG~~~~~Dw~   51 (120)
T cd03167          33 DQVQLGLQCCGASSYQDWQ   51 (120)
T ss_pred             HHHHHhccCCCCCChHHhc
Confidence            7799997     7999996

Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model spans the extracellular domain between the 3rd and 4th trans-membrane segment. Tetraspanins are involved in diverse processes and their various functions may relate to their ability to act as molecular facilitators. Tetraspanins associate laterally with one another and cluster dynamically with numerous parnter domains in membrane microdomains, forming a network of multimolecular complexes, the "tetraspanin web". This subfamily contains sequences similar to oculospanin, which is found to be expressed in retinal pigment epithelium, iris, ciliary body, and retinal ganglion cells.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	144
1g8q_A	90	CD81 antigen, extracellular domain; alpha helical,	80.67

>1g8q_A CD81 antigen, extracellular domain; alpha helical, immune system; 1.60A {Homo sapiens} SCOP: a.135.1.1 PDB: 1iv5_A

Probab=80.67  E-value=0.12  Score=33.37  Aligned_cols=21  Identities=5%  Similarity=-0.081  Sum_probs=15.4

Q ss_pred             HHHhhhc-----CCCCCCccC---CcccC
Q 046219           97 YWLQNRL-----ADGKNWQEI---RSCLA  117 (144)
Q Consensus        97 ~~lQ~~~-----~~~~dW~~~---~sC~~  117 (144)
                      |.+|+++     ++++||...   .||+.
T Consensus        36 d~iQ~~l~CCG~~~~~Dw~~~~vP~ScC~   64 (90)
T 1g8q_A           36 KTFHETLDCCGSSTLTALTTSVLKNNLCP   64 (90)
T ss_dssp             HHHHHHHTCCSCTTCGGGHHHHHHTTCSC
T ss_pred             HHHHHhhcCCCCCChhhhccCCCCCCCCC
Confidence            6799997     899999631   35654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00