Citrus Sinensis ID: 046251

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70----
Protein Sequence
MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEESMDSELAKLDFACKE
Secondary Structure (PSIPRED)
ccccccccccHHHHHHHHccccccccccccccccccccccccccccccEEEccccccccccHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccccHcHHHHHHccccccccccEccccccccEccccccccccEEEHHHHccccccHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
makiggsllvpcvqewvknpmlvvppryirpdedsplnsddtlisqipiidmqsllseesMDSELAKLDFACKE
Flexible Loop (DISEMBL)
makiggsllvpcvqewvkNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEESMDSELAKLDFACKE
Low Complexity Region (SEG)
MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQsllseesmdselAKLDFACKE
Disordered region (IsUnstruct)
*****GSLLVPCVQEWVKNPMLVVPPRYI**************ISQIPII************************
Disordered Region (DISOPRED)
****GGSLLVPCVQEWVKNPMLVVPPRYIR**************SQIPIIDMQSLLSEESMDSELAKLDFACKE
Disordered Region (DISEMBL)
MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEESMDSELAKLDFACKE
Disordered Region (DISPRO)
******SLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEESMDSELAKLDFACKE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEESMDSELAKLDFACKE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	74	2.2.26 [Sep-21-2011]
Q39224	358	Protein SRG1 OS=Arabidops	no	no	0.918	0.189	0.557	2e-12
D4N500	364	Thebaine 6-O-demethylase	N/A	no	1.0	0.203	0.367	3e-05
D4N502	360	Codeine O-demethylase OS=	N/A	no	0.986	0.202	0.405	3e-05
A2A1A0	352	S-norcoclaurine synthase	N/A	no	0.945	0.198	0.364	0.0003

>sp|Q39224|SRG1_ARATH Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1

 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 2/70 (2%)

Query: 7  SLLVPCVQEWVKNPMLV-VPPRYIRPDEDSPLNSDDTLIS-QIPIIDMQSLLSEESMDSE 64
          S+LVP VQE VK   +  VPPRY+R D+D     DD  +  +IPIIDM+ L S  +MDSE
Sbjct: 11 SILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSE 70

Query: 65 LAKLDFACKE 74
          + KLDFACKE
Sbjct: 71 VEKLDFACKE 80

Arabidopsis thaliana (taxid: 3702)

>sp|D4N500|DIOX1_PAPSO Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 5/79 (6%)

Query: 1  MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLIS---QIPIIDMQSLLS 57
          + K+G  + +P VQE  K  +  +P RY+  +E+  L    ++I+    IP+ID+++LLS
Sbjct: 6  LMKLGNGMEIPSVQELAKLTLAEIPSRYVCANENLLLPMGASVINDHETIPVIDIENLLS 65

Query: 58 EESMDS--ELAKLDFACKE 74
           E +    EL +L FACKE
Sbjct: 66 PEPIIGKLELDRLHFACKE 84

Non-heme dioxygenase catalyzing the conversion of thebaine to neopinione. Catalyzes also, with lower efficiency, the 6-O-demethylation of oripavine to morphinone. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, (S)-scoulerine, pavine, noscapine or codeine.

Papaver somniferum (taxid: 3469)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 1

>sp|D4N502|DIOX3_PAPSO Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1

 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 6/79 (7%)

Query: 1  MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLIS---QIPIIDMQSLLS 57
          + K+G  L +P VQE  K  +  +P RY    E SPLN+    ++    +P+ID+Q+LLS
Sbjct: 6  LIKLGNGLSIPSVQELAKLTLAEIPSRYTCTGE-SPLNNIGASVTDDETVPVIDLQNLLS 64

Query: 58 EESMDS--ELAKLDFACKE 74
           E +    EL KL  ACKE
Sbjct: 65 PEPVVGKLELDKLHSACKE 83

Non-heme dioxygenase catalyzing the conversion of codeine to morphine. Catalyzes also, with lower efficiency, the 3-O-demethylation of thebaine to oripavine and of (S)-scoulerine to 3-O-demethylscoulerine. No activity with (S)-reticuline, salutaridine, papaverine, (S)-corytuberine, oripavine, pavine or noscapine.

Papaver somniferum (taxid: 3469)

EC: 1

EC: .

EC: 1

EC: 4

EC: .

EC: 1

EC: 1

EC: .

EC: 3

EC: 2

>sp|A2A1A0|NCS1_COPJA S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1

 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 4/74 (5%)

Query: 1  MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPD--EDSPLNSDDTLISQIPIIDMQSLLSE 58
          +  +GGSL V  VQ      +  +P RY+RP+   D  +  D++L  +IP+ID+  LL +
Sbjct: 5  LTGVGGSLPVENVQVLAGKELKNLPNRYVRPELEHDDVVPIDNSL--EIPVIDLSRLLDQ 62

Query: 59 ESMDSELAKLDFAC 72
          +    ELAK   AC
Sbjct: 63 QYACDELAKFHSAC 76

Involved in the biosynthesis of the common precursor of all benzylisoquinoline alkaloids such as morphine, sanguinarine, codeine or berberine. Condenses dopamine and phenylacetaldehyde, 3,4-dihydrophenylacetaldehyde or 4-hydroxyphenylacetaldehyde.

Coptis japonica (taxid: 3442)

EC: 4

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 7

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
224061381	359	predicted protein [Populus trichocarpa]	0.972	0.200	0.541	4e-16
224061385	355	predicted protein [Populus trichocarpa]	1.0	0.208	0.52	5e-14
255575133	317	Naringenin,2-oxoglutarate 3-dioxygenase,	0.945	0.220	0.535	7e-14
225463356	354	PREDICTED: protein SRG1 [Vitis vinifera]	1.0	0.209	0.545	1e-13
297740621	181	unnamed protein product [Vitis vinifera]	1.0	0.408	0.545	1e-13
359483589	361	PREDICTED: LOW QUALITY PROTEIN: protein	0.986	0.202	0.526	2e-13
224061027	362	predicted protein [Populus trichocarpa]	0.986	0.201	0.546	7e-13
255575141	364	Leucoanthocyanidin dioxygenase, putative	0.837	0.170	0.582	2e-12
26451337	361	SRG1 like protein [Arabidopsis thaliana]	0.918	0.188	0.577	2e-12
255557471	366	Flavonol synthase/flavanone 3-hydroxylas	0.986	0.199	0.534	2e-12

>gi|224061381|ref|XP_002300451.1| predicted protein [Populus trichocarpa] gi|222847709|gb|EEE85256.1| predicted protein [Populus trichocarpa]

 Score = 88.6 bits (218), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 39/72 (54%), Positives = 55/72 (76%)

Query: 2  AKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEESM 61
          + +G SLLVPCVQE  K+ ++ VPPRYIR D++ P+ +    +S++P+IDMQ LL +E+M
Sbjct: 6  SSLGSSLLVPCVQELAKDLLVAVPPRYIRYDQEHPIIASHDPVSEVPVIDMQRLLDQETM 65

Query: 62 DSELAKLDFACK 73
          DSEL +L FACK
Sbjct: 66 DSELGRLHFACK 77

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061385|ref|XP_002300453.1| predicted protein [Populus trichocarpa] gi|222847711|gb|EEE85258.1| predicted protein [Populus trichocarpa]

 Score = 82.0 bits (201), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/75 (52%), Positives = 53/75 (70%), Gaps = 1/75 (1%)

Query: 1  MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSP-LNSDDTLISQIPIIDMQSLLSEE 59
          + + G SL+VPCVQE  K     +PPRYIRPD+D P +      +++IP++DMQ LL +E
Sbjct: 5  VVQFGSSLIVPCVQELAKVNTAAIPPRYIRPDQDQPTIIPSCASVNEIPVVDMQRLLDQE 64

Query: 60 SMDSELAKLDFACKE 74
          SMDSELAKL  AC++
Sbjct: 65 SMDSELAKLHLACRD 79

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575133|ref|XP_002528471.1| Naringenin,2-oxoglutarate 3-dioxygenase, putative [Ricinus communis] gi|223532080|gb|EEF33888.1| Naringenin,2-oxoglutarate 3-dioxygenase, putative [Ricinus communis]

 Score = 81.3 bits (199), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 38/71 (53%), Positives = 53/71 (74%), Gaps = 1/71 (1%)

Query: 4  IGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEESMDS 63
          +G SLLVPCVQE  K  +  +PPRY+R D+D P+N  +  + ++P+IDM+ LLS+ESM S
Sbjct: 8  LGSSLLVPCVQELAKLSLESIPPRYVRQDQDQPINVQNQNV-EVPVIDMERLLSQESMHS 66

Query: 64 ELAKLDFACKE 74
          ELAKL  AC++
Sbjct: 67 ELAKLHCACRD 77

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225463356|ref|XP_002271080.1| PREDICTED: protein SRG1 [Vitis vinifera]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 3/77 (3%)

Query: 1  MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSD-DTLISQI--PIIDMQSLLS 57
          +  +GGSL VPCVQE  K  +  VPPRY+RP++D P  SD  T  S I  P+ID   L+S
Sbjct: 6  LTSLGGSLPVPCVQELAKKTLTTVPPRYLRPEQDPPFLSDSSTTCSSIHAPVIDFNRLVS 65

Query: 58 EESMDSELAKLDFACKE 74
           +SMDSEL KL +ACKE
Sbjct: 66 GDSMDSELDKLHYACKE 82

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740621|emb|CBI30803.3| unnamed protein product [Vitis vinifera]

 Score = 80.5 bits (197), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 3/77 (3%)

Query: 1  MAKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSD-DTLISQI--PIIDMQSLLS 57
          +  +GGSL VPCVQE  K  +  VPPRY+RP++D P  SD  T  S I  P+ID   L+S
Sbjct: 6  LTSLGGSLPVPCVQELAKKTLTTVPPRYLRPEQDPPFLSDSSTTCSSIHAPVIDFNRLVS 65

Query: 58 EESMDSELAKLDFACKE 74
           +SMDSEL KL +ACKE
Sbjct: 66 GDSMDSELDKLHYACKE 82

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359483589|ref|XP_003632983.1| PREDICTED: LOW QUALITY PROTEIN: protein SRG1-like [Vitis vinifera]

 Score = 79.3 bits (194), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 3/76 (3%)

Query: 2  AKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTL---ISQIPIIDMQSLLSE 58
          A +G SLLVP VQE  K+ +  VPPRY+RP++D P +S  T    +  IPIID  +LLS 
Sbjct: 8  ASLGSSLLVPSVQELAKDSLTTVPPRYLRPEQDPPFSSQSTSQTPLPHIPIIDFTALLSG 67

Query: 59 ESMDSELAKLDFACKE 74
          + M+SEL KL  ACKE
Sbjct: 68 DGMESELEKLHHACKE 83

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224061027|ref|XP_002300322.1| predicted protein [Populus trichocarpa] gi|222847580|gb|EEE85127.1| predicted protein [Populus trichocarpa]

 Score = 77.8 bits (190), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/75 (54%), Positives = 53/75 (70%), Gaps = 2/75 (2%)

Query: 2  AKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLIS--QIPIIDMQSLLSEE 59
          A +G SLLVPCVQE  K     VP RY+R D+D P+ +++ + S  QIP+IDM+ L+SEE
Sbjct: 4  ATLGKSLLVPCVQELAKESPATVPTRYLRLDQDPPIINNNEVASLPQIPVIDMRRLVSEE 63

Query: 60 SMDSELAKLDFACKE 74
           MD EL K+D ACKE
Sbjct: 64 QMDLELDKMDRACKE 78

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255575141|ref|XP_002528475.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis] gi|223532084|gb|EEF33892.1| Leucoanthocyanidin dioxygenase, putative [Ricinus communis]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 5/67 (7%)

Query: 10 VPCVQEWVKNPMLVVPPRYIRPDEDSPLNS--DDTLISQIPIIDMQSLLSEESMDSELAK 67
          VPCVQE VK PM  VPPRYIRPD+D  + +  DD    ++P+IDMQ L   +S+DSELAK
Sbjct: 19 VPCVQELVKEPMATVPPRYIRPDQDYSIAAPGDD---GEVPVIDMQRLYDPDSIDSELAK 75

Query: 68 LDFACKE 74
          L  ACK+
Sbjct: 76 LHLACKD 82

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|26451337|dbj|BAC42769.1| SRG1 like protein [Arabidopsis thaliana]

 Score = 76.6 bits (187), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/71 (57%), Positives = 51/71 (71%), Gaps = 3/71 (4%)

Query: 7  SLLVPCVQEWVKNPMLV-VPPRYIRPDEDSP--LNSDDTLISQIPIIDMQSLLSEESMDS 63
          S+LVP VQE VK+ M+  VPPRY+R D+D    +  D  LIS+IPIIDM  L S  ++DS
Sbjct: 11 SILVPSVQEMVKDKMITTVPPRYVRYDQDKTEVVAHDSGLISEIPIIDMNRLCSSTAVDS 70

Query: 64 ELAKLDFACKE 74
          E+ KLDFACKE
Sbjct: 71 EVEKLDFACKE 81

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255557471|ref|XP_002519766.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis] gi|223541183|gb|EEF42739.1| Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]

 Score = 76.3 bits (186), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/73 (53%), Positives = 51/73 (69%)

Query: 2  AKIGGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEESM 61
           K+G SL VP VQE  K  +  VP +Y+RPD + PL S+   + Q+P++DMQ LLSE+S+
Sbjct: 7  TKLGSSLPVPSVQELAKELLTQVPLKYVRPDLEPPLLSNTAALLQVPVVDMQKLLSEDSV 66

Query: 62 DSELAKLDFACKE 74
          D EL KLD ACKE
Sbjct: 67 DLELNKLDRACKE 79

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	74
TAIR|locus:2020422	361	AT1G17010 [Arabidopsis thalian	0.918	0.188	0.507	7.6e-11
TAIR|locus:2020407	358	SRG1 "senescence-related gene	0.918	0.189	0.471	1.5e-09
TAIR|locus:2122669	356	AT4G25300 [Arabidopsis thalian	0.918	0.191	0.471	1.9e-09
TAIR|locus:2122679	353	AT4G25310 [Arabidopsis thalian	0.918	0.192	0.442	4.1e-09
TAIR|locus:2202980	356	AT1G78550 [Arabidopsis thalian	0.918	0.191	0.4	1.4e-07

TAIR|locus:2020422 AT1G17010 [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 7.6e-11, P = 7.6e-11
 Identities = 36/71 (50%), Positives = 43/71 (60%)

Query:     7 SLLVPCVQEWVKNPMLV-VPPRYIRPDEDSP--LNSDDTLISQIPIIDMQXXXXXXXXXX 63
             S+LVP VQE VK+ M+  VPPRY+R D+D    +  D  LIS+IPIIDM           
Sbjct:    11 SILVPSVQEMVKDKMITTVPPRYVRYDQDKTEVVVHDSGLISEIPIIDMNRLCSSTAVDS 70

Query:    64 XXAKLDFACKE 74
                KLDFACKE
Sbjct:    71 EVEKLDFACKE 81

GO:0005506 "iron ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0009813 "flavonoid biosynthetic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009686 "gibberellin biosynthetic process" evidence=RCA

GO:0009740 "gibberellic acid mediated signaling pathway" evidence=RCA

TAIR|locus:2020407 SRG1 "senescence-related gene 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 145 (56.1 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 33/70 (47%), Positives = 40/70 (57%)

Query:     7 SLLVPCVQEWVKNPMLV-VPPRYIRPDEDSPLNSDDTLIS-QIPIIDMQXXXXXXXXXXX 64
             S+LVP VQE VK   +  VPPRY+R D+D     DD  +  +IPIIDM+           
Sbjct:    11 SILVPSVQEMVKEKTITTVPPRYVRSDQDKTEVDDDFDVKIEIPIIDMKRLCSSTTMDSE 70

Query:    65 XAKLDFACKE 74
               KLDFACKE
Sbjct:    71 VEKLDFACKE 80

GO:0005737 "cytoplasm" evidence=ISM

GO:0009813 "flavonoid biosynthetic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009737 "response to abscisic acid stimulus" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009830 "cell wall modification involved in abscission" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010260 "organ senescence" evidence=IEP;RCA

GO:0016682 "oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor" evidence=ISS

TAIR|locus:2122669 AT4G25300 [Arabidopsis thaliana (taxid:3702)]

 Score = 144 (55.7 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 33/70 (47%), Positives = 41/70 (58%)

Query:     7 SLLVPCVQEWVKNPMLV-VPPRYIRPDED-SPLNSDDTLISQIPIIDMQXXXXXXXXXXX 64
             S++VP VQE VK  M+  VPPRY+R D+D + +  D  L +QIPIIDM            
Sbjct:    10 SIIVPSVQEMVKEKMITTVPPRYVRSDQDVAEIAVDSGLRNQIPIIDMSLLCSSTSMDSE 69

Query:    65 XAKLDFACKE 74
               KLD ACKE
Sbjct:    70 IDKLDSACKE 79

GO:0005737 "cytoplasm" evidence=ISM

GO:0009813 "flavonoid biosynthetic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2122679 AT4G25310 [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 4.1e-09, P = 4.1e-09
 Identities = 31/70 (44%), Positives = 42/70 (60%)

Query:     7 SLLVPCVQEWVKNPML--VVPPRYIRPDEDSPLNSDDTLISQIPIIDMQXXXXXXXXXXX 64
             S++VP VQE VK  ++  V+PPRY+R D++    + D+  +QIPIIDM            
Sbjct:    10 SVIVPSVQEMVKEKVITTVLPPRYVRSDQEKGEAAIDSGENQIPIIDMSLLSSSTSMDSE 69

Query:    65 XAKLDFACKE 74
               KLDFACKE
Sbjct:    70 IDKLDFACKE 79

GO:0005737 "cytoplasm" evidence=ISM

GO:0009813 "flavonoid biosynthetic process" evidence=ISS

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA;ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

TAIR|locus:2202980 AT1G78550 [Arabidopsis thaliana (taxid:3702)]

 Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 28/70 (40%), Positives = 41/70 (58%)

Query:     7 SLLVPCVQEWVKNP-MLVVPPRYIRPDED-SPLNSDDTLISQIPIIDMQXXXXXXXXXXX 64
             SL+VP V E VK      +PPRY+R D++ + + +D +L S+IP+IDM            
Sbjct:    11 SLIVPFVLEIVKEKNFTTIPPRYVRVDQEKTEILNDSSLSSEIPVIDMTRLCSVSAMDSE 70

Query:    65 XAKLDFACKE 74
               KLDFAC++
Sbjct:    71 LKKLDFACQD 80


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.139   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       74        62   0.00091  102 3  11 22  0.41    28
                                                     29  0.41    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  521 (55 KB)
  Total size of DFA:  98 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  7.22u 0.13s 7.35t   Elapsed:  00:00:00
  Total cpu time:  7.22u 0.13s 7.35t   Elapsed:  00:00:00
  Start:  Sat May 11 03:18:31 2013   End:  Sat May 11 03:18:31 2013

GO:0005506 "iron ion binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016706 "oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	74
PLN02216	357	PLN02216, PLN02216, protein SRG1	2e-21
PLN02758	361	PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxy	1e-06
PLN02393	362	PLN02393, PLN02393, leucoanthocyanidin dioxygenase	5e-06
PLN02947	374	PLN02947, PLN02947, oxidoreductase	0.002

>gnl|CDD|215129 PLN02216, PLN02216, protein SRG1

 Score = 84.5 bits (209), Expect = 2e-21
 Identities = 40/70 (57%), Positives = 51/70 (72%), Gaps = 2/70 (2%)

Query: 7  SLLVPCVQEWVKNPMLV-VPPRYIRPDED-SPLNSDDTLISQIPIIDMQSLLSEESMDSE 64
          S++VP VQE VK  M+  VPPRY+R D+D + +  D  L S+IPIIDM+ L S  +MDSE
Sbjct: 11 SIIVPSVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSE 70

Query: 65 LAKLDFACKE 74
          + KLDFACKE
Sbjct: 71 VEKLDFACKE 80

Length = 357

>gnl|CDD|215404 PLN02758, PLN02758, oxidoreductase, 2OG-Fe(II) oxygenase family protein

 Score = 43.7 bits (103), Expect = 1e-06
 Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 4/66 (6%)

Query: 13 VQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLIS--QIPIIDMQSLL--SEESMDSELAKL 68
          VQE  K+    VP R+IR  ++ P  + DTL +   IP+ID   L+    + + SE+ KL
Sbjct: 17 VQELRKSKPTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKL 76

Query: 69 DFACKE 74
            AC+E
Sbjct: 77 RLACEE 82

Length = 361

>gnl|CDD|215220 PLN02393, PLN02393, leucoanthocyanidin dioxygenase like protein

 Score = 41.6 bits (98), Expect = 5e-06
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%)

Query: 23 VVPPRYIRPDEDSPLNSDDTLISQ---IPIIDMQSLLSEE--SMDSELAKLDFACKE 74
           +P RY++P    P +S+ T       IP+ID+ SL S++    D+ L  +  AC+E
Sbjct: 25 TIPDRYVKPPSQRPNSSNTTSAPAEINIPVIDLSSLFSDDARLRDATLRAISEACRE 81

Length = 362

>gnl|CDD|215510 PLN02947, PLN02947, oxidoreductase

 Score = 34.7 bits (80), Expect = 0.002
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 6/56 (10%)

Query: 24 VPPRYIRPDEDSPLNSDDTLIS-----QIPIIDMQSLLSEESMDSELAKLDFACKE 74
          VP +YI P  D P  + D  I+     ++P+ID+  L         LA L  AC+E
Sbjct: 39 VPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGSNR-PHVLATLAAACRE 93

Length = 374

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	74
PLN02947	374	oxidoreductase	99.2
PLN02904	357	oxidoreductase	99.18
PLN02393	362	leucoanthocyanidin dioxygenase like protein	99.15
PLN02758	361	oxidoreductase, 2OG-Fe(II) oxygenase family protei	99.15
PLN02216	357	protein SRG1	99.1
PLN03178	360	leucoanthocyanidin dioxygenase; Provisional	99.08
PLN03176	120	flavanone-3-hydroxylase; Provisional	99.01
PLN02912	348	oxidoreductase, 2OG-Fe(II) oxygenase family protei	98.86
PLN02639	337	oxidoreductase, 2OG-Fe(II) oxygenase family protei	98.8
PLN02515	358	naringenin,2-oxoglutarate 3-dioxygenase	98.79
PLN02704	335	flavonol synthase	98.78
PLN00417	348	oxidoreductase, 2OG-Fe(II) oxygenase family protei	98.77
PLN02276	361	gibberellin 20-oxidase	98.65
PLN02750	345	oxidoreductase, 2OG-Fe(II) oxygenase family protei	98.57
PLN02254	358	gibberellin 3-beta-dioxygenase	98.43
PF14226	116	DIOX_N: non-haem dioxygenase in morphine synthesis	97.69
KOG0143	322	consensus Iron/ascorbate family oxidoreductases [S	97.61
PTZ00273	320	oxidase reductase; Provisional	97.45
PLN02403	303	aminocyclopropanecarboxylate oxidase	97.32
PLN02299	321	1-aminocyclopropane-1-carboxylate oxidase	97.26
PLN02485	329	oxidoreductase	97.14
PLN02997	325	flavonol synthase	96.86
COG3491	322	PcbC Isopenicillin N synthase and related dioxygen	96.69
PLN02365	300	2-oxoglutarate-dependent dioxygenase	96.12
PLN03002	332	oxidoreductase, 2OG-Fe(II) oxygenase family protei	95.69
PLN02984	341	oxidoreductase, 2OG-Fe(II) oxygenase family protei	95.4
PLN02156	335	gibberellin 2-beta-dioxygenase	95.35

>PLN02947 oxidoreductase

Probab=99.20  E-value=2.8e-11  Score=84.79  Aligned_cols=65  Identities=28%  Similarity=0.404  Sum_probs=51.7

Q ss_pred             ccccHHHHHhCCCCCCCCCcCCCCCCCCCCCC---C--CCCCCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251            9 LVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSD---D--TLISQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus         9 ~~~~v~~l~~~~~~~vP~~yi~~~~~~~~~~~---~--~~~~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      .+.+|+.|+.++..+||++||||++++|....   .  .....||||||+.|.+. .+..++++|++||++
T Consensus        24 ~~~~v~~l~~~~~~~vp~~yv~p~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~-~~~~~~~~l~~Ac~~   93 (374)
T PLN02947         24 YQKGVKHLCDSGITKVPAKYILPASDRPGLTRDEAIAASGNLKLPVIDLAELRGS-NRPHVLATLAAACRE   93 (374)
T ss_pred             eecCHHHHHhcCCCcCCHHhcCCchhccccccccccccCCCCCCCeEECcccCCc-cHHHHHHHHHHHHHH
Confidence            46689999999899999999999999885311   0  13346999999998653 467799999999985

>PLN02904 oxidoreductase

Probab=99.18  E-value=4.2e-11  Score=83.42  Aligned_cols=66  Identities=21%  Similarity=0.384  Sum_probs=52.5

Q ss_pred             ccccHHHHHhCCCCCCCCCcCCCCCCCCCCC-C-CCCCCCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251            9 LVPCVQEWVKNPMLVVPPRYIRPDEDSPLNS-D-DTLISQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus         9 ~~~~v~~l~~~~~~~vP~~yi~~~~~~~~~~-~-~~~~~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      .+.+|+.|+.++..+||++|+++++++|... . ......||||||+.+.+.+.|..++++|++||++
T Consensus        12 ~~~~~~~l~~~~~~~vp~~~~~~~~~~p~~~~~~~~~~~~iPvIDls~~~~~~~r~~~~~~l~~Ac~~   79 (357)
T PLN02904         12 SFTSAMTLTNSGVPHVPDRYVLPPSQRPMLGSSIGTSTITLPVIDLSLLHDPLLRSCVIHEIEMACKG   79 (357)
T ss_pred             cccchHHHHhcCCCCCCHHhCCCchhcccccccccccCCCCCEEECcccCCchhHHHHHHHHHHHHHH
Confidence            4568999999989999999999999998531 1 1123579999999886544567789999999985

>PLN02393 leucoanthocyanidin dioxygenase like protein

Probab=99.15  E-value=7.3e-11  Score=82.29  Aligned_cols=70  Identities=29%  Similarity=0.486  Sum_probs=55.3

Q ss_pred             CCCcccccHHHHHhCCCCCCCCCcCCCCCCCCCCC---CCCCCCCCCeeecCCCCCcc--hHHHHHHHHHHhhcC
Q 046251            5 GGSLLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNS---DDTLISQIPIIDMQSLLSEE--SMDSELAKLDFACKE   74 (74)
Q Consensus         5 ~~~~~~~~v~~l~~~~~~~vP~~yi~~~~~~~~~~---~~~~~~~iPvIDLs~l~~~~--~~~~~v~~i~~Ac~e   74 (74)
                      +|...+..++.|+..+..++|++||+|+++++...   .......||||||+.|.+++  .|.+++++|++||++
T Consensus         7 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~r~~~~~~l~~Ac~~   81 (362)
T PLN02393          7 DWPEPIVRVQSLSESGLPTIPDRYVKPPSQRPNSSNTTSAPAEINIPVIDLSSLFSDDARLRDATLRAISEACRE   81 (362)
T ss_pred             CCCCccchHHHHHhcCCCcCCHHHcCCchhccccccccccCcCCCCCeEECccccCCChHHHHHHHHHHHHHHHH
Confidence            45666778999988888999999999999988531   11234579999999987654  467899999999985

>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=99.15  E-value=6.5e-11  Score=82.55  Aligned_cols=65  Identities=34%  Similarity=0.502  Sum_probs=50.6

Q ss_pred             cccHHHHHhCCCCCCCCCcCCCCCCCCCCC--CCCCCCCCCeeecCCCCCcc--hHHHHHHHHHHhhcC
Q 046251           10 VPCVQEWVKNPMLVVPPRYIRPDEDSPLNS--DDTLISQIPIIDMQSLLSEE--SMDSELAKLDFACKE   74 (74)
Q Consensus        10 ~~~v~~l~~~~~~~vP~~yi~~~~~~~~~~--~~~~~~~iPvIDLs~l~~~~--~~~~~v~~i~~Ac~e   74 (74)
                      ...++.|++++..+||++|+++.+++|...  .......||||||+.|.+++  .+.+++++|++||++
T Consensus        14 ~~~~~~l~~~~~~~vp~~~v~~~~~~p~~~~~~~~~~~~IPvIDl~~l~~~~~~~~~~~~~~l~~Ac~~   82 (361)
T PLN02758         14 IDDVQELRKSKPTTVPERFIRDMDERPDLASDTLHAPDDIPVIDFSRLVKGDNDELFSEILKLRLACEE   82 (361)
T ss_pred             cccHHHHHhcCCCCCCHHHcCCchhccccccccccCCCCCCeEEchhhcCCChHHHHHHHHHHHHHHHh
Confidence            446899998888999999999999988532  11234579999999987654  345689999999985

>PLN02216 protein SRG1

Probab=99.10  E-value=1.8e-10  Score=80.23  Aligned_cols=65  Identities=58%  Similarity=0.894  Sum_probs=50.0

Q ss_pred             cccHHHHHhC-CCCCCCCCcCCCCCCCCCCC-CCCCCCCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           10 VPCVQEWVKN-PMLVVPPRYIRPDEDSPLNS-DDTLISQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        10 ~~~v~~l~~~-~~~~vP~~yi~~~~~~~~~~-~~~~~~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ++.|+.++.+ ++.+||++||+|++++|... .......||||||+.+.+++.+++++++|++||++
T Consensus        14 ~~~~~~~~~~~~~~~~p~~~v~p~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~l~~Ac~~   80 (357)
T PLN02216         14 VPSVQEMVKEKMITTVPPRYVRSDQDKTEIAVDSGLSSEIPIIDMKRLCSSTAMDSEVEKLDFACKE   80 (357)
T ss_pred             chhHHHHHhcCCCCCCCHhhCcCcccCCccccccCcCCCCCeEEChhccCCccHHHHHHHHHHHHHH
Confidence            4669999876 78899999999999987421 11112469999999987655456799999999985

>PLN03178 leucoanthocyanidin dioxygenase; Provisional

Probab=99.08  E-value=1.7e-10  Score=80.38  Aligned_cols=66  Identities=26%  Similarity=0.460  Sum_probs=51.6

Q ss_pred             ccccHHHHHhCCCCCCCCCcCCCCCCCCCCCCC------CCCCCCCeeecCCCCCcc--hHHHHHHHHHHhhcC
Q 046251            9 LVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDD------TLISQIPIIDMQSLLSEE--SMDSELAKLDFACKE   74 (74)
Q Consensus         9 ~~~~v~~l~~~~~~~vP~~yi~~~~~~~~~~~~------~~~~~iPvIDLs~l~~~~--~~~~~v~~i~~Ac~e   74 (74)
                      .+..++.|++.+..+||+.|++|.++++.....      .....||||||+.+.+++  .|..++++|++||++
T Consensus         4 ~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~   77 (360)
T PLN03178          4 AVPRVEALASSGVSSIPKEYIRPPEERPSIGDVFEEEKKAAGPQVPVVDLSNIESDDEVVREACVEAVRAAAAE   77 (360)
T ss_pred             hhhhHHHHHhcCCCCCCHHHcCCchhcccccccccccccccCCCCCEEEchhhcCCChhhHHHHHHHHHHHHHH
Confidence            345689999888899999999999988753211      123469999999987655  367899999999985

>PLN03176 flavanone-3-hydroxylase; Provisional

Probab=99.01  E-value=7.1e-10  Score=67.15  Aligned_cols=61  Identities=15%  Similarity=0.332  Sum_probs=44.7

Q ss_pred             cHHHHHhCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCeeecCCCCCcc-hHHHHHHHHHHhhcC
Q 046251           12 CVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEE-SMDSELAKLDFACKE   74 (74)
Q Consensus        12 ~v~~l~~~~~~~vP~~yi~~~~~~~~~~~~~~~~~iPvIDLs~l~~~~-~~~~~v~~i~~Ac~e   74 (74)
                      .++.|...  ..+|..|+|+..++|..........||||||+.+.+++ .+.+++++|++||++
T Consensus         5 ~~~~l~~~--~~~p~~~~~~~~~~p~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~L~~A~~~   66 (120)
T PLN03176          5 TLTALAEE--KTLQASFVRDEDERPKVAYNQFSNEIPVISIAGIDDGGEKRAEICNKIVEACEE   66 (120)
T ss_pred             HHHHHhcc--CCCCHhhcCChhhCcCccccccCCCCCeEECccccCCchHHHHHHHHHHHHHHH
Confidence            34555543  78999999999998843211223469999999987654 456789999999974

>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=98.86  E-value=4.2e-09  Score=73.24  Aligned_cols=61  Identities=28%  Similarity=0.479  Sum_probs=46.4

Q ss_pred             cHHHHHhCCCCCCCCCcCCCCCCCCCCCC-CCCCCCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           12 CVQEWVKNPMLVVPPRYIRPDEDSPLNSD-DTLISQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        12 ~v~~l~~~~~~~vP~~yi~~~~~~~~~~~-~~~~~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      -||++. +++..||+.|+++.+++|.... ......||||||+.+.+.+ +.+++++|++||++
T Consensus         7 ~~~~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~-~~~~~~~l~~A~~~   68 (348)
T PLN02912          7 LVSDIA-SVVDHVPSNYVRPVSDRPNMSEVETSGDSIPLIDLRDLHGPN-RADIINQFAHACSS   68 (348)
T ss_pred             HHHHHh-cCCCCCCHHhcCCchhccccccccccCCCCCeEECcccCCcC-HHHHHHHHHHHHHH
Confidence            477777 4588999999999988874221 1123469999999986544 66789999999985

>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=98.80  E-value=7.6e-09  Score=71.55  Aligned_cols=57  Identities=21%  Similarity=0.490  Sum_probs=43.3

Q ss_pred             HHHHhCCC--CCCCCCcCCCCCCCCCCCCCCCCCCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           14 QEWVKNPM--LVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        14 ~~l~~~~~--~~vP~~yi~~~~~~~~~~~~~~~~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      +.|+++++  .++|++||++++++|..........||||||+..    .+.+++++|++||++
T Consensus         3 ~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~iPvIDls~~----~~~~~~~~l~~Ac~~   61 (337)
T PLN02639          3 TKLLSTGIRHTTLPESYVRPESERPRLSEVSTCENVPVIDLGSP----DRAQVVQQIGDACRR   61 (337)
T ss_pred             hhhhhhcCCcCcCCHHhcCCchhcccccccccCCCCCeEECCCc----cHHHHHHHHHHHHHh
Confidence            34777765  8999999999988884222223456999999863    366799999999985

>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase

Probab=98.79  E-value=7.3e-09  Score=72.32  Aligned_cols=55  Identities=15%  Similarity=0.314  Sum_probs=41.9

Q ss_pred             CCCCCCCCcCCCCCCCCCCCCCCCCCCCCeeecCCCCCcc-hHHHHHHHHHHhhcC
Q 046251           20 PMLVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEE-SMDSELAKLDFACKE   74 (74)
Q Consensus        20 ~~~~vP~~yi~~~~~~~~~~~~~~~~~iPvIDLs~l~~~~-~~~~~v~~i~~Ac~e   74 (74)
                      +..+||++|+++.+++|..........||||||+.+.+++ .+.+++++|++||++
T Consensus        11 ~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~~~~~~~~~~~l~~Ac~~   66 (358)
T PLN02515         11 GESTLQSSFVRDEDERPKVAYNQFSDEIPVISLAGIDEVGGRRGEICRKIVEACED   66 (358)
T ss_pred             CCCcCCHHhcCCchhccCccccccCCCCCEEEChhccCCchHHHHHHHHHHHHHHH
Confidence            4579999999999998853221223469999999986544 467799999999985

>PLN02704 flavonol synthase

Probab=98.78  E-value=1.2e-08  Score=70.51  Aligned_cols=60  Identities=22%  Similarity=0.326  Sum_probs=45.8

Q ss_pred             ccHHHHHhCC--CCCCCCCcCCCCCCCCCCCC-CCCCCCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           11 PCVQEWVKNP--MLVVPPRYIRPDEDSPLNSD-DTLISQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        11 ~~v~~l~~~~--~~~vP~~yi~~~~~~~~~~~-~~~~~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ..++.+++.+  ..+||++|+++++++|.... ......||||||+..    .+.+++++|++||++
T Consensus         4 ~~~~~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~iPvIDls~~----~~~~~~~~l~~Ac~~   66 (335)
T PLN02704          4 ERVQAIASSSLLKETIPEEFIRSEKEQPAITTFHGVDPQVPTIDLSDP----DEEKLTRLIAEASKE   66 (335)
T ss_pred             hhHHHHHhCCCCcCCCCHHHcCCcccccccccccccCCCCCeEECCCc----cHHHHHHHHHHHHHH
Confidence            4578887754  68999999999999886422 123457999999864    245789999999985

>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=98.77  E-value=1.8e-08  Score=70.03  Aligned_cols=64  Identities=30%  Similarity=0.308  Sum_probs=46.2

Q ss_pred             cccHHHHHhCCCCCCCCCcCCCCCCCCCC-C--CCCCCCCCCeeecCCCCCcc-hHHHHHHHHHHhhcC
Q 046251           10 VPCVQEWVKNPMLVVPPRYIRPDEDSPLN-S--DDTLISQIPIIDMQSLLSEE-SMDSELAKLDFACKE   74 (74)
Q Consensus        10 ~~~v~~l~~~~~~~vP~~yi~~~~~~~~~-~--~~~~~~~iPvIDLs~l~~~~-~~~~~v~~i~~Ac~e   74 (74)
                      .+.|++++.++ ..||++|++|..+.+.. .  .......||||||+.+.+++ .++.++++|++||++
T Consensus         6 ~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~~~~~~~~~~~~~~~l~~A~~~   73 (348)
T PLN00417          6 FKTVQEVVAAG-EGLPERYLHTPTGDGEGQPLNGAVPEMDIPAIDLSLLLSSSDDGREELSKLHSALST   73 (348)
T ss_pred             chhHHHHHhCC-CCCCccccCCcccccccccccccccCCCCCeEEChhhcCCCchHHHHHHHHHHHHHH
Confidence            35688988764 68999999999886421 1  11133479999999887654 344567999999985

>PLN02276 gibberellin 20-oxidase

Probab=98.65  E-value=2.8e-08  Score=69.36  Aligned_cols=51  Identities=25%  Similarity=0.491  Sum_probs=40.3

Q ss_pred             CCCCCCcCCCCCCCCCCCCCCCCCCCCeeecCCCCCcc--hHHHHHHHHHHhhcC
Q 046251           22 LVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEE--SMDSELAKLDFACKE   74 (74)
Q Consensus        22 ~~vP~~yi~~~~~~~~~~~~~~~~~iPvIDLs~l~~~~--~~~~~v~~i~~Ac~e   74 (74)
                      .+||+.|+++.+++|...  .....||||||+.+.+++  .+.+++++|++||++
T Consensus        18 ~~vp~~~~~~~~~~p~~~--~~~~~iPvIDls~~~~~~~~~~~~~~~~l~~Ac~~   70 (361)
T PLN02276         18 SNIPAQFIWPDEEKPSAA--VPELAVPLIDLGGFLSGDEAATAEAARLVREACLK   70 (361)
T ss_pred             CCCCHHhcCCccccCCCC--CcCCCCCeEEChhhcCCChHHHHHHHHHHHHHHHH
Confidence            579999999999987521  123579999999987654  466799999999985

>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=98.57  E-value=8.7e-08  Score=66.48  Aligned_cols=52  Identities=25%  Similarity=0.349  Sum_probs=39.0

Q ss_pred             CCCCCCcCCCCCCCCCCCCCCCCCCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           22 LVVPPRYIRPDEDSPLNSDDTLISQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        22 ~~vP~~yi~~~~~~~~~~~~~~~~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      .++|..|+++.+++|..........||||||+.+.+. .+.+++++|++||++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~iPvIDls~~~~~-~~~~~~~~l~~Ac~~   53 (345)
T PLN02750          2 GEIDPAFIQAPEHRPKFHLTNSDEEIPVIDLSVSTSH-DKTEVASKIGEACKK   53 (345)
T ss_pred             CCCCHHHcCCchhccCccccccCCCCCeEECCCCCcc-cHHHHHHHHHHHHHh
Confidence            4799999999999885321112347999999986333 467789999999985

>PLN02254 gibberellin 3-beta-dioxygenase

Probab=98.43  E-value=2e-07  Score=65.20  Aligned_cols=48  Identities=21%  Similarity=0.381  Sum_probs=34.8

Q ss_pred             CCCCCCCCcCCCCCCC--CCCC--CCCCCCCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           20 PMLVVPPRYIRPDEDS--PLNS--DDTLISQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        20 ~~~~vP~~yi~~~~~~--~~~~--~~~~~~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ...+||++||||++++  |...  .......||||||+..       .++++|++||++
T Consensus        26 ~~~~vp~~~v~p~~~~~~~~~~~~~~~~~~~iPvIDl~~~-------~~~~~l~~Ac~~   77 (358)
T PLN02254         26 SLQTLPDSHVWTPKDDLLFSSAPSPSTTDESIPVIDLSDP-------NALTLIGHACET   77 (358)
T ss_pred             hhccCChhhcCChhhccCccccccccCcCCCCCeEeCCCH-------HHHHHHHHHHHH
Confidence            3458999999999998  3211  1122357999999742       478999999985

>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A

Probab=97.69  E-value=1.8e-05  Score=46.47  Aligned_cols=26  Identities=31%  Similarity=0.575  Sum_probs=19.8

Q ss_pred             CCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           47 IPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        47 iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ||||||+.  ....+..++++|++||++
T Consensus         1 iPvIDls~--~~~~~~~~~~~l~~A~~~   26 (116)
T PF14226_consen    1 IPVIDLSP--DPADREEVAEQLRDACEE   26 (116)
T ss_dssp             --EEEHGG--CHHHHHHHHHHHHHHHHH
T ss_pred             CCeEECCC--CCccHHHHHHHHHHHHHh
Confidence            79999997  233578899999999974

...

>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=97.61  E-value=6.4e-05  Score=52.10  Aligned_cols=32  Identities=34%  Similarity=0.535  Sum_probs=25.6

Q ss_pred             CCCCCCeeecCCCCCcc-hHHHHHHHHHHhhcC
Q 046251           43 LISQIPIIDMQSLLSEE-SMDSELAKLDFACKE   74 (74)
Q Consensus        43 ~~~~iPvIDLs~l~~~~-~~~~~v~~i~~Ac~e   74 (74)
                      ....||||||+.+.+.+ .+..++++|++||++
T Consensus        14 ~~~~iPvIDls~~~~~~~~~~~~~~~i~~Ace~   46 (322)
T KOG0143|consen   14 SELDIPVIDLSCLDSDDPGREEVVEKLREACEE   46 (322)
T ss_pred             cCCCcCeEECCCCCCcchhHHHHHHHHHHHHHH
Confidence            34679999999875544 377889999999985

>PTZ00273 oxidase reductase; Provisional

Probab=97.45  E-value=0.00011  Score=50.50  Aligned_cols=30  Identities=27%  Similarity=0.541  Sum_probs=24.6

Q ss_pred             CCCCeeecCCCCCcc--hHHHHHHHHHHhhcC
Q 046251           45 SQIPIIDMQSLLSEE--SMDSELAKLDFACKE   74 (74)
Q Consensus        45 ~~iPvIDLs~l~~~~--~~~~~v~~i~~Ac~e   74 (74)
                      ..||||||+.+.+++  .+.+++++|++||++
T Consensus         4 ~~iPvIDl~~~~~~~~~~~~~~~~~l~~A~~~   35 (320)
T PTZ00273          4 ASLPVIDVSPLFGGESAEKMRVAKQIDEACRT   35 (320)
T ss_pred             CCCCEEecHHhcCCChHHHHHHHHHHHHHHHh
Confidence            369999999987655  456789999999985

>PLN02403 aminocyclopropanecarboxylate oxidase

Probab=97.32  E-value=0.00023  Score=48.96  Aligned_cols=28  Identities=32%  Similarity=0.603  Sum_probs=23.2

Q ss_pred             CCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           46 QIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        46 ~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      .||||||+.+.+ ..+++++++|++||++
T Consensus         2 ~iPvIDls~~~~-~~~~~~~~~l~~Ac~~   29 (303)
T PLN02403          2 EIPVIDFDQLDG-EKRSKTMSLLHQACEK   29 (303)
T ss_pred             CCCeEeCccCCc-ccHHHHHHHHHHHHHh
Confidence            599999998854 3467799999999985

>PLN02299 1-aminocyclopropane-1-carboxylate oxidase

Probab=97.26  E-value=0.00028  Score=48.81  Aligned_cols=29  Identities=28%  Similarity=0.536  Sum_probs=23.6

Q ss_pred             CCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           45 SQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        45 ~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ..||||||+.+.+. .+.+++++|++||++
T Consensus         5 ~~iPvIDls~~~~~-~~~~~~~~l~~A~~~   33 (321)
T PLN02299          5 ESFPVIDMEKLNGE-ERAATMELIKDACEN   33 (321)
T ss_pred             CCCCEEECcCCCcc-cHHHHHHHHHHHHHh
Confidence            35999999988543 466789999999985

>PLN02485 oxidoreductase

Probab=97.14  E-value=0.00033  Score=48.33  Aligned_cols=30  Identities=30%  Similarity=0.723  Sum_probs=23.4

Q ss_pred             CCCCeeecCCCCCc--------c-hHHHHHHHHHHhhcC
Q 046251           45 SQIPIIDMQSLLSE--------E-SMDSELAKLDFACKE   74 (74)
Q Consensus        45 ~~iPvIDLs~l~~~--------~-~~~~~v~~i~~Ac~e   74 (74)
                      ..||||||+.|.++        + .+.+++++|++||++
T Consensus         6 ~~iPvIDl~~l~~~~~~~~~~~~~~~~~~~~~l~~Ac~~   44 (329)
T PLN02485          6 KSIPVIDISPLVAKCDDPDMAEDPDVAEVVRQLDKACRD   44 (329)
T ss_pred             CCCCeEechhhhccCcccccccchHHHHHHHHHHHHHHH
Confidence            46999999998632        1 355789999999985

>PLN02997 flavonol synthase

Probab=96.86  E-value=0.0011  Score=45.99  Aligned_cols=27  Identities=19%  Similarity=0.292  Sum_probs=22.0

Q ss_pred             CCCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           44 ISQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        44 ~~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ...||||||+.+    .++.++++|++||++
T Consensus        30 ~~~IPvIDls~~----~~~~~~~~l~~Ac~~   56 (325)
T PLN02997         30 AVDVPVVDLSVS----DEDFLVREVVKASEE   56 (325)
T ss_pred             CCCCCeEECCCC----CHHHHHHHHHHHHHH
Confidence            457999999875    245789999999985

>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]

Probab=96.69  E-value=0.0012  Score=45.92  Aligned_cols=30  Identities=30%  Similarity=0.573  Sum_probs=25.7

Q ss_pred             CCCCeeecCCCCCcc--hHHHHHHHHHHhhcC
Q 046251           45 SQIPIIDMQSLLSEE--SMDSELAKLDFACKE   74 (74)
Q Consensus        45 ~~iPvIDLs~l~~~~--~~~~~v~~i~~Ac~e   74 (74)
                      ..||+|||+.+.+++  .|.+++++|++||++
T Consensus         4 ~~lp~idls~~~~~~~~~~~~~~~~l~~A~r~   35 (322)
T COG3491           4 RDLPIIDLSELAGSDPGARRRVAQELRAACRE   35 (322)
T ss_pred             CcCceeccHHhcCCCcHHHHHHHHHHHHHHHh
Confidence            469999999997755  678899999999985

>PLN02365 2-oxoglutarate-dependent dioxygenase

Probab=96.12  E-value=0.0046  Score=42.32  Aligned_cols=24  Identities=33%  Similarity=0.656  Sum_probs=19.1

Q ss_pred             CCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           45 SQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        45 ~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ..||||||+.+.      ..+++|++||++
T Consensus         4 ~~iPvIDls~~~------~~~~~l~~Ac~~   27 (300)
T PLN02365          4 VNIPTIDLEEFP------GQIEKLREACER   27 (300)
T ss_pred             CCCCEEEChhhH------HHHHHHHHHHHH
Confidence            459999999861      246999999985

>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=95.69  E-value=0.0099  Score=41.24  Aligned_cols=26  Identities=27%  Similarity=0.483  Sum_probs=20.6

Q ss_pred             CCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           45 SQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        45 ~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ..||+|||+..    .+..++++|++||++
T Consensus        13 ~~iP~IDl~~~----~~~~~~~~l~~Ac~~   38 (332)
T PLN03002         13 SSLNCIDLAND----DLNHSVASLKQACLD   38 (332)
T ss_pred             CCCCEEeCCch----hHHHHHHHHHHHHHh
Confidence            36999999842    345689999999985

>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein

Probab=95.40  E-value=0.015  Score=40.69  Aligned_cols=23  Identities=48%  Similarity=0.827  Sum_probs=18.4

Q ss_pred             CCCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           44 ISQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        44 ~~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ...||||||+.+        .+++|++||++
T Consensus        36 ~~~IPvIDls~~--------~~~~l~~A~~~   58 (341)
T PLN02984         36 DIDIPVIDMECL--------DMEKLREACKD   58 (341)
T ss_pred             cCCCCeEeCcHH--------HHHHHHHHHHh
Confidence            456999999864        35899999985

>PLN02156 gibberellin 2-beta-dioxygenase

Probab=95.35  E-value=0.021  Score=39.86  Aligned_cols=22  Identities=32%  Similarity=0.588  Sum_probs=17.2

Q ss_pred             CCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           46 QIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        46 ~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      .||||||+..       .+.++|++||++
T Consensus        26 ~iPvIDls~~-------~~~~~l~~Ac~~   47 (335)
T PLN02156         26 LIPVIDLTDS-------DAKTQIVKACEE   47 (335)
T ss_pred             CCCcccCCCh-------HHHHHHHHHHHH
Confidence            5999999741       246799999985

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	74
1gp6_A	356	Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep	1e-13
1w9y_A	319	1-aminocyclopropane-1-carboxylate oxidase 1; oxyge	1e-04

>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A* Length = 356

 Score = 62.3 bits (152), Expect = 1e-13
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 8/75 (10%)

Query: 8  LLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLIS------QIPIIDMQSLLSEESM 61
          + V  V+   K+ ++ +P  YIRP E+    +D  L        Q+P ID++++ S++  
Sbjct: 2  VAVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEK 61

Query: 62 DSE--LAKLDFACKE 74
            E  + +L  A  +
Sbjct: 62 IRENCIEELKKASLD 76

>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X Length = 319

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 6/29 (20%), Positives = 12/29 (41%), Gaps = 1/29 (3%)

Query: 46 QIPIIDMQSLLSEESMDSELAKLDFACKE 74
            PII +  +   E   + +  +  AC+ 
Sbjct: 3  NFPIISLDKVNGVER-AATMEMIKDACEN 30

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	74
1gp6_A	356	Leucoanthocyanidin dioxygenase; 2-oxoglutarate dep	99.19
1odm_A	331	Isopenicillin N synthase; antibiotic biosynthesis,	97.66
1w9y_A	319	1-aminocyclopropane-1-carboxylate oxidase 1; oxyge	97.31
3oox_A	312	Putative 2OG-Fe(II) oxygenase family protein; stru	97.0
1dcs_A	311	Deacetoxycephalosporin C synthase; ferrous oxygena	96.1
3on7_A	280	Oxidoreductase, iron/ascorbate family; structural	80.3

>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*

Probab=99.19  E-value=6.7e-12  Score=86.05  Aligned_cols=66  Identities=26%  Similarity=0.429  Sum_probs=51.3

Q ss_pred             ccccHHHHHhCCCCCCCCCcCCCCCCCCCCCC---CC---CCCCCCeeecCCCCCcc--hHHHHHHHHHHhhcC
Q 046251            9 LVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSD---DT---LISQIPIIDMQSLLSEE--SMDSELAKLDFACKE   74 (74)
Q Consensus         9 ~~~~v~~l~~~~~~~vP~~yi~~~~~~~~~~~---~~---~~~~iPvIDLs~l~~~~--~~~~~v~~i~~Ac~e   74 (74)
                      ++.+||+|+++++.+||++|+||.++++....   ..   ....||||||+.|.+++  .|.+++++|++||++
T Consensus         3 ~~~~v~~l~~~~~~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~   76 (356)
T 1gp6_A            3 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLD   76 (356)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred             CcccHHHHHhcCCCCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHh
Confidence            35679999998889999999999888775321   00   12369999999987644  467799999999974

>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...

Probab=97.66  E-value=3.4e-05  Score=52.17  Aligned_cols=30  Identities=20%  Similarity=0.455  Sum_probs=24.9

Q ss_pred             CCCCeeecCCCCCcc--hHHHHHHHHHHhhcC
Q 046251           45 SQIPIIDMQSLLSEE--SMDSELAKLDFACKE   74 (74)
Q Consensus        45 ~~iPvIDLs~l~~~~--~~~~~v~~i~~Ac~e   74 (74)
                      ..||||||+.|.+++  .+..++++|++||++
T Consensus         7 ~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~   38 (331)
T 1odm_A            7 ANVPKIDVSPLFGDDQAAKMRVAQQIDAASRD   38 (331)
T ss_dssp             CCCCEEECGGGGSSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEchHhcCCChHHHHHHHHHHHHHHHh
Confidence            469999999986654  466799999999985

>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X

Probab=97.31  E-value=8.7e-05  Score=50.06  Aligned_cols=28  Identities=18%  Similarity=0.409  Sum_probs=23.2

Q ss_pred             CCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           46 QIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        46 ~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      .||||||+.|.+ ..+..++++|++||++
T Consensus         3 ~iPvIDls~l~~-~~~~~~~~~l~~A~~~   30 (319)
T 1w9y_A            3 NFPIISLDKVNG-VERAATMEMIKDACEN   30 (319)
T ss_dssp             CCCEEEGGGGGS-TTHHHHHHHHHHHHHH
T ss_pred             CCCEEECcccCc-ccHHHHHHHHHHHHHh
Confidence            599999999853 3477899999999974

>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}

Probab=97.00  E-value=9.5e-05  Score=49.55  Aligned_cols=28  Identities=11%  Similarity=0.078  Sum_probs=22.8

Q ss_pred             CCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           45 SQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        45 ~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ..||||||+.|.+  .+.+++++|++||++
T Consensus         5 ~~iPvIDls~~~~--~~~~~~~~l~~A~~~   32 (312)
T 3oox_A            5 SAIDPVSFSLYAK--DFTRFAQELGASFER   32 (312)
T ss_dssp             CSSCCEETHHHHH--CHHHHHHHHHHHHHH
T ss_pred             CCCCeEEChHhcc--cHHHHHHHHHHHHHh
Confidence            3599999998743  467899999999974

>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*

Probab=96.10  E-value=0.00086  Score=44.95  Aligned_cols=26  Identities=8%  Similarity=0.226  Sum_probs=19.1

Q ss_pred             CCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           45 SQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        45 ~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ..||||||+.|.+++..    ++|++||++
T Consensus         3 ~~iPvIDls~l~~~~~~----~~l~~A~~~   28 (311)
T 1dcs_A            3 TTVPTFSLAELQQGLHQ----DEFRRCLRD   28 (311)
T ss_dssp             CCCCEEEHHHHHTTCSH----HHHHHHHHH
T ss_pred             CCCcEEEchhhcCCCHH----HHHHHHHHh
Confidence            35999999987554422    289999974

>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}

Probab=80.30  E-value=1.4  Score=28.78  Aligned_cols=11  Identities=18%  Similarity=0.356  Sum_probs=7.9

Q ss_pred             CCCCeeecCCC
Q 046251           45 SQIPIIDMQSL   55 (74)
Q Consensus        45 ~~iPvIDLs~l   55 (74)
                      +.||||||+..
T Consensus         2 ~~IPvIDls~~   12 (280)
T 3on7_A            2 MKLETIDYRAA   12 (280)
T ss_dssp             --CCEEETTST
T ss_pred             CCCCEEECCCh
Confidence            36999999863

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	74
d1gp6a_	349	b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cr	1e-09

>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 349

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 50.3 bits (119), Expect = 1e-09
 Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 8/75 (10%)

Query: 8  LLVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSDDTLIS------QIPIIDMQSLLSEESM 61
          + V  V+   K+ ++ +P  YIRP E+    +D  L        Q+P ID++++ S++  
Sbjct: 1  VAVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEK 60

Query: 62 DSE--LAKLDFACKE 74
            E  + +L  A  +
Sbjct: 61 IRENCIEELKKASLD 75

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	74
d1gp6a_	349	Anthocyanidin synthase {Mouse-ear cress (Arabidops	99.49
d1odma_	329	Isopenicillin N synthase {Emericella nidulans [Tax	97.96
d1w9ya1	307	1-aminocyclopropane-1-carboxylate oxidase 1 {Petun	97.75
d1dcsa_	311	Deacetoxycephalosporin C synthase {Streptomyces cl	96.38

>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Anthocyanidin synthase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.49  E-value=8.4e-15  Score=97.17  Aligned_cols=66  Identities=26%  Similarity=0.418  Sum_probs=55.1

Q ss_pred             ccccHHHHHhCCCCCCCCCcCCCCCCCCCCCC------CCCCCCCCeeecCCCCCcc--hHHHHHHHHHHhhcC
Q 046251            9 LVPCVQEWVKNPMLVVPPRYIRPDEDSPLNSD------DTLISQIPIIDMQSLLSEE--SMDSELAKLDFACKE   74 (74)
Q Consensus         9 ~~~~v~~l~~~~~~~vP~~yi~~~~~~~~~~~------~~~~~~iPvIDLs~l~~~~--~~~~~v~~i~~Ac~e   74 (74)
                      .+.+|++|+++|+.+||++||||++++|....      .....+||||||+.|.+++  .|++++++|++||++
T Consensus         2 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~   75 (349)
T d1gp6a_           2 AVERVESLAKSGIISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLD   75 (349)
T ss_dssp             CCCCHHHHHHTTCSSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred             CCcchHHHHhCCCccCCHhhcCChhhcCCCCccccccccCCCCCcCeEEChhcCCCCHHHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999987531      2345579999999997766  467899999999974

>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Isopenicillin N synthase
species: Emericella nidulans [TaxId: 162425]

Probab=97.96  E-value=2.7e-06  Score=55.11  Aligned_cols=31  Identities=19%  Similarity=0.418  Sum_probs=26.1

Q ss_pred             CCCCCeeecCCCCCcc--hHHHHHHHHHHhhcC
Q 046251           44 ISQIPIIDMQSLLSEE--SMDSELAKLDFACKE   74 (74)
Q Consensus        44 ~~~iPvIDLs~l~~~~--~~~~~v~~i~~Ac~e   74 (74)
                      ...||||||+.|.+++  .|.+++++|++||++
T Consensus         4 ~~~IPvIDls~l~~~d~~~r~~~~~~l~~A~~~   36 (329)
T d1odma_           4 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRD   36 (329)
T ss_dssp             BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCcEEchhhcCCCHHHHHHHHHHHHHHHHc
Confidence            4579999999997766  567889999999985

>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: 1-aminocyclopropane-1-carboxylate oxidase 1
species: Petunia hybrida [TaxId: 4102]

Probab=97.75  E-value=5.3e-06  Score=53.52  Aligned_cols=28  Identities=18%  Similarity=0.409  Sum_probs=23.8

Q ss_pred             CCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           46 QIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        46 ~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      .||||||+.+.+. +|.+++++|++||++
T Consensus         2 ~lPvIDl~~~~~~-~r~~~~~~l~~A~~~   29 (307)
T d1w9ya1           2 NFPIISLDKVNGV-ERAATMEMIKDACEN   29 (307)
T ss_dssp             CCCEEEGGGGGST-THHHHHHHHHHHHHH
T ss_pred             CCCeEECcccCCc-CHHHHHHHHHHHHHc
Confidence            5999999998654 488899999999974

>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]}

class: All beta proteins
fold: Double-stranded beta-helix
superfamily: Clavaminate synthase-like
family: Penicillin synthase-like
domain: Deacetoxycephalosporin C synthase
species: Streptomyces clavuligerus [TaxId: 1901]

Probab=96.38  E-value=0.00019  Score=46.28  Aligned_cols=26  Identities=8%  Similarity=0.226  Sum_probs=19.5

Q ss_pred             CCCCeeecCCCCCcchHHHHHHHHHHhhcC
Q 046251           45 SQIPIIDMQSLLSEESMDSELAKLDFACKE   74 (74)
Q Consensus        45 ~~iPvIDLs~l~~~~~~~~~v~~i~~Ac~e   74 (74)
                      ..||||||+.|.+++    ..++|++||++
T Consensus         3 ~siPvIDl~~l~~~~----~~e~l~~A~~~   28 (311)
T d1dcsa_           3 TTVPTFSLAELQQGL----HQDEFRRCLRD   28 (311)
T ss_dssp             CCCCEEEHHHHHTTC----SHHHHHHHHHH
T ss_pred             CCCCEEEchhhcCcc----HHHHHHHHHHC
Confidence            359999999885544    24689999974