Citrus Sinensis ID: 046369

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Protein Sequence
MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDESPSLGIQTL
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcHHccccHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEcccEEcccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccHHHHHHHHHHHHHHccccccccccEEcccccccEccccccccccccccccccccccccEEEEc
Coil and Loop (DISEMBL)
MADGGQQSRYVKLtrdqapvdeditpgdlnqpiqvpqLVVHRccecgqplpesyeppsdedwttgicgcfsdlescatgflcpcvlfgrnvetlrddipwanacvchgMCIEGGLALAAATVLfhgidpktsflICEGLFFAWWMCGIYTGLLRQSLQkkyhlknapcdpclvhcclHWCALCQEHREMKNHLsenastamtivnpppvqemnpgenkesapsesasgndespslgiqtl
Flexible Loop (DISEMBL)
madggqqsryvkltrdqapvdeditpGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKesapsesasgndespslgiqtl
Low Complexity Region (SEG)
MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDESPSLGIQTL
Disordered region (IsUnstruct)
******************************QPIQVPQLVVHRCCECGQPL*********EDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQE*******************************************************
Disordered Region (DISOPRED)
*****************************************************************ICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREMKN***********************************************T*
Disordered Region (DISEMBL)
*********YVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPE********DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREMKNHLSENASTAMTIVNPPPVQE*****************************
Disordered Region (DISPRO)
**************RDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREMKNHLSENASTAMTIVNPPPV*******************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDESPSLGIQTL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	240	2.2.26 [Sep-21-2011]
B6SGC5	239	Cell number regulator 6 O	N/A	no	0.954	0.958	0.633	1e-86
B4FF80	184	Cell number regulator 5 O	N/A	no	0.575	0.75	0.375	2e-18
Q8S8T8	190	Protein PLANT CADMIUM RES	no	no	0.583	0.736	0.354	4e-18
D9HP20	159	Cell number regulator 4 O	N/A	no	0.504	0.761	0.356	2e-11
Q9LQU2	151	Protein PLANT CADMIUM RES	no	no	0.454	0.721	0.294	6e-10
Q9LQU4	152	Protein PLANT CADMIUM RES	no	no	0.458	0.723	0.275	7e-10
P0CW97	152	Protein PLANT CADMIUM RES	no	no	0.454	0.717	0.273	1e-09
D9HP27	158	Cell number regulator 11	N/A	no	0.512	0.778	0.287	3e-09
Q9M9A5	224	Protein PLANT CADMIUM RES	no	no	0.625	0.669	0.295	6e-09
D9HP19	167	Cell number regulator 3 O	N/A	no	0.529	0.760	0.317	1e-08

>sp|B6SGC5|CNR6_MAIZE Cell number regulator 6 OS=Zea mays GN=CNR6 PE=2 SV=1

 Score =  318 bits (816), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 145/229 (63%), Positives = 171/229 (74%)

Query: 2   ADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDED 61
           A     SRYVKLT+DQ    EDI PG+LNQP+ VPQL   RC ECGQ LPESYEPP+DE 
Sbjct: 5   ATSSHPSRYVKLTKDQDAPAEDIRPGELNQPVHVPQLEGRRCSECGQVLPESYEPPADEP 64

Query: 62  WTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAAT 121
           WTTGI GC  D E+C TG  CPCVLFGRNVE +R+DIPW   CVCH + +EGG+ LA  T
Sbjct: 65  WTTGIFGCTDDPETCRTGLFCPCVLFGRNVEAVREDIPWTTPCVCHAVFVEGGITLAILT 124

Query: 122 VLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCA 181
            +FHG+DP+TSFLI EGL F+WW+C  YTG+ RQ LQ+KYHLKN+PCDPC+VHCCLHWCA
Sbjct: 125 AIFHGVDPRTSFLIGEGLVFSWWLCATYTGIFRQGLQRKYHLKNSPCDPCMVHCCLHWCA 184

Query: 182 LCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGND 230
            CQEHRE    L+EN +  MT+VNPPPVQEM+  E  E   +E +  +D
Sbjct: 185 NCQEHRERTGRLAENNAVPMTVVNPPPVQEMSMLEEVEEKGAEKSEHDD 233

Zea mays (taxid: 4577)

>sp|B4FF80|CNR5_MAIZE Cell number regulator 5 OS=Zea mays GN=CNR5 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/152 (37%), Positives = 77/152 (50%), Gaps = 14/152 (9%)

Query: 62  WTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAAT 121
           W++GIC CF D +SC  G +CPC LFG+N + L      A +C  H  C+  GL  +   
Sbjct: 45  WSSGICACFDDPQSCCIGAICPCFLFGKNAQFLGSGT-LAGSCTTH--CMLWGLLTSLCC 101

Query: 122 VLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCA 181
           V   G+      L   G   A + CG      R +L+ KY+L  APC     H   H CA
Sbjct: 102 VFTGGL-----VLAVPGSAVACYACG-----YRSALRTKYNLPEAPCGDLTTHLFCHLCA 151

Query: 182 LCQEHREMKNHLSENASTAMTIVNPPPVQEMN 213
           +CQE+RE++      +S A   V PPPVQ M+
Sbjct: 152 ICQEYREIRERTGSGSSPAPN-VTPPPVQTMD 182

Zea mays (taxid: 4577)

>sp|Q8S8T8|PCR10_ARATH Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 77/155 (49%), Gaps = 15/155 (9%)

Query: 60  EDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAA 119
             W++GIC CF D++SC  G  CPC +FG+N E L     +A  C+ H  CI   L    
Sbjct: 45  RQWSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSGT-FAGPCLTH--CISWALVNTI 101

Query: 120 ATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHW 179
                +G     + L   G F + + CG      R+SL+ KY+L+ APC   + H   H 
Sbjct: 102 CCFATNG-----ALLGLPGCFVSCYACG-----YRKSLRAKYNLQEAPCGDFVTHFFCHL 151

Query: 180 CALCQEHREMKNHLSENA--STAMTIVNPPPVQEM 212
           CA+CQE+RE++   S +      M I N P  Q M
Sbjct: 152 CAICQEYREIREQSSGSYPLDMKMAITNAPLAQTM 186

May be involved in cadmium resistance.

Arabidopsis thaliana (taxid: 3702)

>sp|D9HP20|CNR4_MAIZE Cell number regulator 4 OS=Zea mays GN=CNR4 PE=2 SV=1

 Score = 69.3 bits (168), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 69/146 (47%), Gaps = 25/146 (17%)

Query: 52  ESYEPPSDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCI 111
            +Y PP+ E WTTG+CGCFSD +SC   FLCPC+ FG+  E L             GM  
Sbjct: 2   STYPPPTGE-WTTGLCGCFSDCKSCCLSFLCPCIPFGQVAEVLDK-----------GMTS 49

Query: 112 EGGLALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPC 171
            G   L    +L  G+    + + C           IYT   R+ L+  Y L   PC  C
Sbjct: 50  CGLAGLLYCLLLHAGV----AVVPCH---------CIYTCTYRRKLRAAYDLPPEPCADC 96

Query: 172 LVHCCLHWCALCQEHREMKNHLSENA 197
            VH     CA+ Q +RE+KN  ++ A
Sbjct: 97  CVHMWCGPCAISQMYRELKNRGADPA 122

Zea mays (taxid: 4577)

>sp|Q9LQU2|PCR1_ARATH Protein PLANT CADMIUM RESISTANCE 1 OS=Arabidopsis thaliana GN=PCR1 PE=1 SV=1

 Score = 64.7 bits (156), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 30/139 (21%)

Query: 55  EPPSDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGG 114
           +P +  +W+TG C CFSD  +C     CPC+ FG+  E +                  G 
Sbjct: 8   KPHAQGEWSTGFCDCFSDCRNCCITLCCPCITFGQVAEIVD----------------RGS 51

Query: 115 LALAAATVLFHGIDPKTSFLICEGLFFAWWMCG-IYTGLLRQSLQKKYHLKNAPCDPCLV 173
            +  AA  L+  ID  TS             CG +Y       ++ +Y++K   C  CL 
Sbjct: 52  KSCCAAGALYMLIDLITS-------------CGRMYACFYSGKMRAQYNIKGDGCTDCLK 98

Query: 174 HCCLHWCALCQEHREMKNH 192
           H C + CAL Q++RE+K+ 
Sbjct: 99  HFCCNLCALTQQYRELKHR 117

Involved in glutathione-independent cadmium resistance. Reduces cadmium uptake rather than activating efflux, but is not closely coupled to calcium transporter.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LQU4|PCR2_ARATH Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1

 Score = 64.3 bits (155), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 28/138 (20%)

Query: 55  EPPSDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGG 114
           +P ++ +W+TG C CFSD ++C   F CPC+ FG+  E +                  G 
Sbjct: 9   KPHAEGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVD----------------RGS 52

Query: 115 LALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVH 174
            +   A  L+  I   T                IY+   R  ++ +Y++K   C  CL H
Sbjct: 53  TSCGTAGALYALIAVVTGCAC------------IYSCFYRGKMRAQYNIKGDDCTDCLKH 100

Query: 175 CCLHWCALCQEHREMKNH 192
            C   C+L Q++RE+K+ 
Sbjct: 101 FCCELCSLTQQYRELKHR 118

Zinc transporter acting in both zinc extrusion and long-distance zinc transport. Involved in the loading of zinc into the xyleme and in the detoxification of excess zinc at the epidermal cells. Acts independently from the zinc transporters HMA2 and HMA4. May be also involved in cadmium resistance.

Arabidopsis thaliana (taxid: 3702)

>sp|P0CW97|PCR3_ARATH Protein PLANT CADMIUM RESISTANCE 3 OS=Arabidopsis thaliana GN=PCR3 PE=3 SV=1

 Score = 63.9 bits (154), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 30/139 (21%)

Query: 55  EPPSDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGG 114
            P ++ +W+TG C CFSD ++C   +LCPC+ FG+  + +                  G 
Sbjct: 9   NPHAEGEWSTGFCDCFSDCQNCCITWLCPCITFGQVADIVD----------------RGN 52

Query: 115 LALAAATVLFHGIDPKTSFLICEGLFFAWWMCG-IYTGLLRQSLQKKYHLKNAPCDPCLV 173
            +   A  L+  +   T              CG +Y+ + R  ++ +Y+++   C  CL 
Sbjct: 53  TSCGTAGALYVLLAAITG-------------CGCLYSCIYRGKIRAQYNIRGDGCTDCLK 99

Query: 174 HCCLHWCALCQEHREMKNH 192
           H C   CAL QE+RE+K+ 
Sbjct: 100 HFCCELCALTQEYRELKHR 118

May be involved in heavy metals transport.

Arabidopsis thaliana (taxid: 3702)

>sp|D9HP27|CNR11_MAIZE Cell number regulator 11 OS=Zea mays GN=CNR11 PE=2 SV=1

 Score = 62.4 bits (150), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 69/160 (43%), Gaps = 37/160 (23%)

Query: 52  ESYEPPSDE----DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCH 107
           E+  P +D+    +W+ G+C CF DL +C     CPCV FGR  E +       + C   
Sbjct: 27  EALSPLADQSMPGEWSVGLCDCFGDLHTCCLTLWCPCVTFGRTAEIVDR----GSTC--- 79

Query: 108 GMCIEGGLALAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAP 167
             C+ G L    +T+ +                  W    +Y    R S++ +Y L+ +P
Sbjct: 80  --CMSGTLYYLLSTIGWQ-----------------W----LYGCAKRSSMRSQYSLRESP 116

Query: 168 CDPCLVHCCLHWCALCQEHREMKNHLSENASTAMTIVNPP 207
           C  C VH     CALCQE+ E++         A  I +PP
Sbjct: 117 CMDCCVHFWCGPCALCQEYTELQK---RGFHMAKGISSPP 153

Zea mays (taxid: 4577)

>sp|Q9M9A5|PCR6_ARATH Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis thaliana GN=PCR6 PE=2 SV=1

 Score = 61.2 bits (147), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 82/196 (41%), Gaps = 46/196 (23%)

Query: 15  RDQAPVDED-------ITP---GDLNQPIQVPQ-----LVVHRCCECGQPLPESYEPP-- 57
           + + PVDE        I P   G +NQP QVP        +++     QP   S   P  
Sbjct: 23  QSEQPVDEKRVLQAEQIYPNNGGVVNQPNQVPMRPGPPTYINQSATFNQPYGVSMAGPVH 82

Query: 58  -SDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLA 116
               +WT+G+  C +D E+       P V FG+  E +                 EG  +
Sbjct: 83  TQPSNWTSGLFDCMNDGENALITCCFPFVTFGQIAEVID----------------EGATS 126

Query: 117 LAAATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCC 176
              A +L+         LIC    FA  +  +YT   R  L+ KY L +AP    + HC 
Sbjct: 127 CGTAGMLYG--------LIC--CLFA--IPCVYTCTFRTKLRSKYGLPDAPAPDWITHCF 174

Query: 177 LHWCALCQEHREMKNH 192
             +CALCQE+RE+KN 
Sbjct: 175 CEYCALCQEYRELKNR 190

May be involved in heavy metals transport.

Arabidopsis thaliana (taxid: 3702)

>sp|D9HP19|CNR3_MAIZE Cell number regulator 3 OS=Zea mays GN=CNR3 PE=2 SV=1

 Score = 60.5 bits (145), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 66/164 (40%), Gaps = 37/164 (22%)

Query: 60  EDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAA 119
            +W++ +  CF D + C   F CPC+ FGR  E +            HGM   G  A   
Sbjct: 30  REWSSRLLDCFDDFDICCMTFWCPCITFGRTAEIVD-----------HGMTSCGTSAALF 78

Query: 120 ATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVH-CCLH 178
           A + +      T    C                 R  L+ ++ L  APC   LVH CCLH
Sbjct: 79  ALIQWLSGSQCTWAFSCT---------------YRTRLRAQHGLPEAPCADFLVHLCCLH 123

Query: 179 WCALCQEHREMKNHLSE-------NASTAMTIVN--PPPVQEMN 213
            CALCQE+RE+K    E       NA  A   V   PP  Q M 
Sbjct: 124 -CALCQEYRELKARGYEPVLGWEFNAQRAAAGVAMCPPASQGMG 166

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
255541136	239	conserved hypothetical protein [Ricinus	0.987	0.991	0.794	1e-105
297734552	277	unnamed protein product [Vitis vinifera]	0.987	0.855	0.746	1e-104
225453496	238	PREDICTED: cell number regulator 6 [Viti	0.987	0.995	0.746	1e-104
449445702	236	PREDICTED: cell number regulator 6-like	0.958	0.974	0.731	1e-101
449515885	236	PREDICTED: cell number regulator 6-like	0.958	0.974	0.731	1e-101
444247272	255	cell number regulator 12 [Prunus avium]	0.966	0.909	0.737	1e-101
147800082	289	hypothetical protein VITISV_032324 [Viti	0.987	0.820	0.613	9e-97
225466125	239	PREDICTED: cell number regulator 6 isofo	0.995	1.0	0.691	6e-96
255539785	236	conserved hypothetical protein [Ricinus	0.958	0.974	0.702	7e-96
297824537	244	hypothetical protein ARALYDRAFT_483631 [	0.916	0.901	0.705	4e-92

>gi|255541136|ref|XP_002511632.1| conserved hypothetical protein [Ricinus communis] gi|223548812|gb|EEF50301.1| conserved hypothetical protein [Ricinus communis]

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 189/238 (79%), Positives = 209/238 (87%), Gaps = 1/238 (0%)

Query: 1   MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDE 60
           MADG  QSRYVKLT+DQ+PV EDITPG+LNQPIQVPQL++HRC ECGQ LPESYEPP+DE
Sbjct: 1   MADGNAQSRYVKLTKDQSPV-EDITPGELNQPIQVPQLIIHRCVECGQALPESYEPPADE 59

Query: 61  DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAA 120
           DWTTGIC C  D +SC TG  CPCVLFG NVETLR+DIPWANACVCH MC+EGGLALAAA
Sbjct: 60  DWTTGICACLEDFDSCRTGLFCPCVLFGHNVETLREDIPWANACVCHAMCVEGGLALAAA 119

Query: 121 TVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWC 180
           T  FHGIDPKTSFLICEGLFFAWWMCGIYTGL RQSLQKKYHLKN+PCDPCLVHCC+HWC
Sbjct: 120 TAFFHGIDPKTSFLICEGLFFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 179

Query: 181 ALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDESPSLGIQ 238
           ALCQEHREMKNHLS+N+   MT+VNPPPVQ+MN  E++ESAP   +S N E+ +L IQ
Sbjct: 180 ALCQEHREMKNHLSDNSHMQMTVVNPPPVQQMNTDESQESAPDAQSSRNGENTNLEIQ 237

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734552|emb|CBI16603.3| unnamed protein product [Vitis vinifera]

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/241 (74%), Positives = 204/241 (84%), Gaps = 4/241 (1%)

Query: 1   MADG-GQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSD 59
           M++G  Q SRYVKL +DQAPV EDITPG+LNQPI+VPQL+VHRC ECGQPLPESY+PP+D
Sbjct: 40  MSEGIAQSSRYVKLKKDQAPV-EDITPGELNQPIEVPQLIVHRCNECGQPLPESYQPPAD 98

Query: 60  EDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAA 119
           EDWTTGICGC  D ESC TG  CPCVLFG NVE LR+DIPW NACVCH +C+EGG+ LAA
Sbjct: 99  EDWTTGICGCAEDRESCWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMTLAA 158

Query: 120 ATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHW 179
           AT LFHGIDPKTSFLICEGL F WWMCGIYTGL RQSLQK+YHLKN+PCDPCLVHCC+HW
Sbjct: 159 ATALFHGIDPKTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCCMHW 218

Query: 180 CALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDESPSLGIQT 239
           CA+CQEHREMK HLS N++  MTIVNPPPVQEM+ G N+E+AP  S+    E  ++ IQ 
Sbjct: 219 CAICQEHREMKGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAP--SSKNGTEHTTMEIQP 276

Query: 240 L 240
           L
Sbjct: 277 L 277

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225453496|ref|XP_002277735.1| PREDICTED: cell number regulator 6 [Vitis vinifera]

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 180/241 (74%), Positives = 204/241 (84%), Gaps = 4/241 (1%)

Query: 1   MADG-GQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSD 59
           M++G  Q SRYVKL +DQAPV EDITPG+LNQPI+VPQL+VHRC ECGQPLPESY+PP+D
Sbjct: 1   MSEGIAQSSRYVKLKKDQAPV-EDITPGELNQPIEVPQLIVHRCNECGQPLPESYQPPAD 59

Query: 60  EDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAA 119
           EDWTTGICGC  D ESC TG  CPCVLFG NVE LR+DIPW NACVCH +C+EGG+ LAA
Sbjct: 60  EDWTTGICGCAEDRESCWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMTLAA 119

Query: 120 ATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHW 179
           AT LFHGIDPKTSFLICEGL F WWMCGIYTGL RQSLQK+YHLKN+PCDPCLVHCC+HW
Sbjct: 120 ATALFHGIDPKTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCCMHW 179

Query: 180 CALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDESPSLGIQT 239
           CA+CQEHREMK HLS N++  MTIVNPPPVQEM+ G N+E+AP  S+    E  ++ IQ 
Sbjct: 180 CAICQEHREMKGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAP--SSKNGTEHTTMEIQP 237

Query: 240 L 240
           L
Sbjct: 238 L 238

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445702|ref|XP_004140611.1| PREDICTED: cell number regulator 6-like [Cucumis sativus]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/231 (73%), Positives = 198/231 (85%), Gaps = 1/231 (0%)

Query: 1   MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDE 60
           MA+G  QSRYV+LT+DQ P+ EDITPG+LNQPIQVPQL+VHRC ECGQPLPESY+PP+DE
Sbjct: 1   MAEGSAQSRYVRLTKDQGPL-EDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADE 59

Query: 61  DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAA 120
           DWTTGICGCF D+ +C  G LCPCVLFG NVETLR++IPW NACVCH MC+EGG+A+AAA
Sbjct: 60  DWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAA 119

Query: 121 TVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWC 180
           T LFHGIDP+TSFLI E L FAWWMCGIYTGL RQSLQKKYHLKN+PCDPCLVHCC+HWC
Sbjct: 120 TALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 179

Query: 181 ALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDE 231
           ALCQE+REM+NHLS+N +  MT+++PP +Q MN  ++ E  PS S   + E
Sbjct: 180 ALCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNEFPPSSSVVPSQE 230

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449515885|ref|XP_004164978.1| PREDICTED: cell number regulator 6-like [Cucumis sativus]

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 169/231 (73%), Positives = 198/231 (85%), Gaps = 1/231 (0%)

Query: 1   MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDE 60
           MA+G  QSRYV+LT+DQ P+ EDITPG+LNQPIQVPQL+VHRC ECGQPLPESY+PP+DE
Sbjct: 1   MAEGSAQSRYVRLTKDQGPL-EDITPGELNQPIQVPQLIVHRCEECGQPLPESYQPPADE 59

Query: 61  DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAA 120
           DWTTGICGCF D+ +C  G LCPCVLFG NVETLR++IPW NACVCH MC+EGG+A+AAA
Sbjct: 60  DWTTGICGCFQDISTCWRGMLCPCVLFGENVETLREEIPWQNACVCHAMCVEGGMAVAAA 119

Query: 121 TVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWC 180
           T LFHGIDP+TSFLI E L FAWWMCGIYTGL RQSLQKKYHLKN+PCDPCLVHCC+HWC
Sbjct: 120 TALFHGIDPQTSFLISETLLFAWWMCGIYTGLFRQSLQKKYHLKNSPCDPCLVHCCMHWC 179

Query: 181 ALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDE 231
           ALCQE+REM+NHLS+N +  MT+++PP +Q MN  ++ E  PS S   + E
Sbjct: 180 ALCQENREMRNHLSDNITMQMTVIDPPALQAMNTNDDNELPPSSSVVPSQE 230

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|444247272|gb|AGD94948.1| cell number regulator 12 [Prunus avium] gi|444247274|gb|AGD94949.1| cell number regulator 12 [Prunus avium] gi|444247276|gb|AGD94950.1| cell number regulator 12 [Prunus avium]

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 171/232 (73%), Positives = 197/232 (84%)

Query: 1   MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDE 60
           MADG  QSRYVKLTR+Q    EDITPG+LNQPIQ+PQL+V +C ECGQPLPE Y+PP+DE
Sbjct: 1   MADGNPQSRYVKLTREQEAPTEDITPGELNQPIQIPQLIVDKCAECGQPLPERYQPPADE 60

Query: 61  DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAA 120
           +WTTGI GC  D  SC TG  CPCVLFGRNVET+R+DIPW NACVCH MC+EGG+A+AAA
Sbjct: 61  EWTTGIFGCAEDPGSCWTGLFCPCVLFGRNVETIREDIPWNNACVCHAMCVEGGIAVAAA 120

Query: 121 TVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWC 180
           T  FHG+DPKTS LICE L FAWWMC IYTGL RQSLQKKYHLK++PCDPCLVHCC+HWC
Sbjct: 121 TGFFHGLDPKTSVLICETLLFAWWMCAIYTGLFRQSLQKKYHLKDSPCDPCLVHCCMHWC 180

Query: 181 ALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDES 232
           ALCQEHREM+NHLS+N S  MT+V PPPVQEMN GENK++A S  +SG++ +
Sbjct: 181 ALCQEHREMRNHLSDNTSNTMTLVAPPPVQEMNSGENKDAASSSESSGHEHN 232

Source: Prunus avium

Species: Prunus avium

Genus: Prunus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147800082|emb|CAN77653.1| hypothetical protein VITISV_032324 [Vitis vinifera]

 Score =  358 bits (920), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 179/292 (61%), Positives = 204/292 (69%), Gaps = 55/292 (18%)

Query: 1   MADG-GQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSD 59
           M++G  Q SRYVKL +DQAPV EDITPG+LNQPI+VPQL+VHRC ECGQPLPESY+PP+D
Sbjct: 1   MSEGIAQSSRYVKLKKDQAPV-EDITPGELNQPIEVPQLIVHRCNECGQPLPESYQPPAD 59

Query: 60  EDWTTGICGCFSDLESCA------------------------------------------ 77
           EDWTTGICGC  D ES +                                          
Sbjct: 60  EDWTTGICGCAEDRESYSYVSDCLDGNGDDDENYWYIKMILLSNNLSLIVIKSFIYGINL 119

Query: 78  ---------TGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAATVLFHGID 128
                    TG  CPCVLFG NVE LR+DIPW NACVCH +C+EGG+ LAAAT LFHGID
Sbjct: 120 IMKNNLAGWTGLFCPCVLFGHNVEQLREDIPWTNACVCHALCVEGGMTLAAATALFHGID 179

Query: 129 PKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHRE 188
           PKTSFLICEGL F WWMCGIYTGL RQSLQK+YHLKN+PCDPCLVHCC+HWCA+CQEHRE
Sbjct: 180 PKTSFLICEGLLFTWWMCGIYTGLFRQSLQKQYHLKNSPCDPCLVHCCMHWCAICQEHRE 239

Query: 189 MKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDESPSLGIQTL 240
           MK HLS N++  MTIVNPPPVQEM+ G N+E+AP  S+    E  ++ IQ L
Sbjct: 240 MKGHLSSNSAMPMTIVNPPPVQEMDAGGNQEAAP--SSKNGTEHTTMEIQPL 289

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225466125|ref|XP_002267975.1| PREDICTED: cell number regulator 6 isoform 1 [Vitis vinifera] gi|296084213|emb|CBI24601.3| unnamed protein product [Vitis vinifera]

 Score =  356 bits (913), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 166/240 (69%), Positives = 192/240 (80%), Gaps = 1/240 (0%)

Query: 1   MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDE 60
           MA+G   SRYVKLT+DQ PV+E I PG+LNQPI VPQL V +C ECGQPLPESYEPP++E
Sbjct: 1   MAEGAVHSRYVKLTKDQGPVEE-IKPGELNQPIDVPQLNVRKCNECGQPLPESYEPPANE 59

Query: 61  DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAA 120
            WTTGI GC  D ESC TG  CPCVLFGRN+E+LR+D PW   C+CH +CIEGG+ALA  
Sbjct: 60  PWTTGIFGCAEDTESCWTGLFCPCVLFGRNIESLREDTPWTTPCICHAICIEGGIALAIG 119

Query: 121 TVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWC 180
           T +FHGIDP+TSFLICEGL FAWWMCGIYTGL+RQSLQKKYHL+N+PCDPC+VHCC+HWC
Sbjct: 120 TGVFHGIDPRTSFLICEGLLFAWWMCGIYTGLVRQSLQKKYHLQNSPCDPCMVHCCMHWC 179

Query: 181 ALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDESPSLGIQTL 240
           ALCQEHREMK  LSE+    MTIVNPPPVQEMN  EN +   + S++   E   L +Q L
Sbjct: 180 ALCQEHREMKGRLSEDLVMPMTIVNPPPVQEMNSEENNQQDAAPSSAKGTEHTHLEMQAL 239

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255539785|ref|XP_002510957.1| conserved hypothetical protein [Ricinus communis] gi|223550072|gb|EEF51559.1| conserved hypothetical protein [Ricinus communis]

 Score =  355 bits (912), Expect = 7e-96,   Method: Compositional matrix adjust.
 Identities = 163/232 (70%), Positives = 191/232 (82%), Gaps = 2/232 (0%)

Query: 1   MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDE 60
           MA+    SRYVKLT++QA + EDI PG+LNQPI+VPQL V +C ECGQPLPE++EPP+DE
Sbjct: 2   MAEASAHSRYVKLTKEQAAI-EDIKPGELNQPIEVPQLNVRKCNECGQPLPENFEPPADE 60

Query: 61  DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAA 120
            WTTGI GC  D ESC TG  CPCVLFGRNVE+LRDD PW   C+CH +CIEGG+ALAAA
Sbjct: 61  PWTTGIFGCTEDTESCWTGLFCPCVLFGRNVESLRDDTPWTTPCICHAVCIEGGMALAAA 120

Query: 121 TVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWC 180
           T +FHG+DP+TSFL+CEGL FAWWMCGIYTGL+RQSLQ+KYHL+N+PCDPC+VHCC+HWC
Sbjct: 121 TAIFHGVDPRTSFLVCEGLLFAWWMCGIYTGLVRQSLQRKYHLRNSPCDPCMVHCCMHWC 180

Query: 181 ALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPG-ENKESAPSESASGNDE 231
           ALCQEHREMK  LS+N    MTIVNPPPVQEMN   +N++S PS     N E
Sbjct: 181 ALCQEHREMKGRLSDNFVMPMTIVNPPPVQEMNSASDNRDSEPSSEKGTNLE 232

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297824537|ref|XP_002880151.1| hypothetical protein ARALYDRAFT_483631 [Arabidopsis lyrata subsp. lyrata] gi|297325990|gb|EFH56410.1| hypothetical protein ARALYDRAFT_483631 [Arabidopsis lyrata subsp. lyrata]

 Score =  343 bits (880), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 156/221 (70%), Positives = 184/221 (83%), Gaps = 1/221 (0%)

Query: 1   MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDE 60
           MADG   SRYVKL ++QAPV+EDITPG+LNQPI VPQL V +C EC Q LPE+YEPPSDE
Sbjct: 1   MADGNAASRYVKLRKEQAPVEEDITPGELNQPIDVPQLNVRKCHECMQVLPETYEPPSDE 60

Query: 61  DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAA 120
           +WTTGI GC  D ESC TG  CPCVLFGRN+E +R++IPW   CVCH +C+EGG+ALAA 
Sbjct: 61  NWTTGIFGCAEDPESCRTGLFCPCVLFGRNIEAVREEIPWTQPCVCHAICVEGGMALAAV 120

Query: 121 TVLFHG-IDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHW 179
           T LF G IDP+T+ +ICEGLFFAWWMCGIY+GL RQ LQKKYHLKNAPCD C+VHCCLHW
Sbjct: 121 TALFSGYIDPQTTVVICEGLFFAWWMCGIYSGLFRQELQKKYHLKNAPCDHCMVHCCLHW 180

Query: 180 CALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKES 220
           CALCQEHREMKNHLS+  +++ T ++PPPVQEMN  E +++
Sbjct: 181 CALCQEHREMKNHLSDTEASSSTTMDPPPVQEMNTEEKRDA 221

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	240
TAIR|locus:2055617	244	AT2G45010 "AT2G45010" [Arabido	0.945	0.930	0.697	7.8e-94
TAIR|locus:2163700	241	AT5G51400 "AT5G51400" [Arabido	0.995	0.991	0.593	1.2e-79
TAIR|locus:505006313	190	AT2G40935 "AT2G40935" [Arabido	0.575	0.726	0.366	1.9e-21
TAIR|locus:504954894	152	AT5G35525 "AT5G35525" [Arabido	0.141	0.223	0.470	4.4e-16
TAIR|locus:2006772	152	PCR2 "AT1G14870" [Arabidopsis	0.158	0.25	0.447	2.3e-15
TAIR|locus:2026910	160	PCR11 "AT1G68610" [Arabidopsis	0.187	0.281	0.422	1.5e-14
TAIR|locus:2016625	148	AT1G58320 "AT1G58320" [Arabido	0.245	0.398	0.409	3.5e-12
ASPGD|ASPL0000061958	131	AN0759 [Emericella nidulans (t	0.15	0.274	0.416	4e-12
ZFIN|ZDB-GENE-070727-1	125	ponzr1 "plac8 onzin related pr	0.137	0.264	0.5	2.3e-11
TAIR|locus:2026905	161	AT1G68630 "AT1G68630" [Arabido	0.191	0.285	0.446	2.9e-11

TAIR|locus:2055617 AT2G45010 "AT2G45010" [Arabidopsis thaliana (taxid:3702)]

 Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
 Identities = 159/228 (69%), Positives = 189/228 (82%)

Query:     1 MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDE 60
             MADG   SRYVKL ++QAPV+EDITPG+LNQPI VPQL V +C EC Q LPE+YEPPSDE
Sbjct:     1 MADGNASSRYVKLRKEQAPVEEDITPGELNQPIDVPQLNVRKCHECMQVLPETYEPPSDE 60

Query:    61 DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAA 120
             +WTTGI GC  D ESC TG  CPCVLFGRN+E +R++IPW   CVCH +C+EGG+ALAA 
Sbjct:    61 NWTTGIFGCAEDPESCRTGLFCPCVLFGRNIEAVREEIPWTQPCVCHAVCVEGGMALAAV 120

Query:   121 TVLFHG-IDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHW 179
             T LF G IDP+T+ +ICEGLFFAWWMCGIY+GL RQ LQKKYHLKNAPCD C+VHCCLHW
Sbjct:   121 TALFSGYIDPQTTVVICEGLFFAWWMCGIYSGLFRQELQKKYHLKNAPCDHCMVHCCLHW 180

Query:   180 CALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESAS 227
             CALCQEHREMKNHLS+  +++ T ++PPPVQEMN  E ++++ S S+S
Sbjct:   181 CALCQEHREMKNHLSDTEASSSTTMDPPPVQEMNTEERRDASSSSSSS 228

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2163700 AT5G51400 "AT5G51400" [Arabidopsis thaliana (taxid:3702)]

 Score = 800 (286.7 bits), Expect = 1.2e-79, P = 1.2e-79
 Identities = 143/241 (59%), Positives = 175/241 (72%)

Query:     1 MADGGQQSRYVKLTRDQAPVDEDITPGDLNQPIQVPQLVVHRCCECGQPLPESYEPPSDE 60
             M+DGG  SRYVKLT++QAPVDE I PG+LNQPI+V  L VH+C ECGQPLPE++E P+DE
Sbjct:     2 MSDGGAPSRYVKLTKEQAPVDE-IHPGELNQPIEVSHLAVHKCNECGQPLPENFEAPADE 60

Query:    61 DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDD-IPWANACVCHGMCIEGGLALAA 119
              WTTGI GC  D+ S   G  CP VLFGR  ETL D+   W  AC+CH + +EGGL  A+
Sbjct:    61 PWTTGIFGCTEDMNSFWLGLFCPSVLFGRVYETLSDEETSWKKACICHSIVVEGGLTAAS 120

Query:   120 ATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHW 179
                   GIDP TS LI EGL F WWMCGIYTG +RQ+LQ+KYHL+NAPCDPC+VHCCLH+
Sbjct:   121 MLACVPGIDPHTSLLIWEGLLFVWWMCGIYTGNVRQTLQRKYHLQNAPCDPCMVHCCLHF 180

Query:   180 CALCQEHREMKNHLSENASTAMTIVNPPPVQEMNPGENKESAPSESASGNDESPSLGIQT 239
             CA+CQEHREMKN LS+N    MT++NPPPVQEM+   +++     S   +  S  L ++ 
Sbjct:   181 CAVCQEHREMKNRLSDNFVMPMTVINPPPVQEMSASGDRDQHHHNSVPVSHHSSDLEMRP 240

Query:   240 L 240
             L
Sbjct:   241 L 241

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:505006313 AT2G40935 "AT2G40935" [Arabidopsis thaliana (taxid:3702)]

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 56/153 (36%), Positives = 78/153 (50%)

Query:    62 WTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAAT 121
             W++GIC CF D++SC  G  CPC +FG+N E L     +A  C+ H  CI   L      
Sbjct:    47 WSSGICACFDDMQSCCVGLFCPCYIFGKNAELLGSGT-FAGPCLTH--CISWALVNTICC 103

Query:   122 VLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCA 181
                +G     + L   G F + + CG Y    R+SL+ KY+L+ APC   + H   H CA
Sbjct:   104 FATNG-----ALLGLPGCFVSCYACG-Y----RKSLRAKYNLQEAPCGDFVTHFFCHLCA 153

Query:   182 LCQEHREMKNHLSEN--ASTAMTIVNPPPVQEM 212
             +CQE+RE++   S +      M I N P  Q M
Sbjct:   154 ICQEYREIREQSSGSYPLDMKMAITNAPLAQTM 186

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006661 "phosphatidylinositol biosynthetic process" evidence=RCA

TAIR|locus:504954894 AT5G35525 "AT5G35525" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 4.4e-16, Sum P(2) = 4.4e-16
 Identities = 16/34 (47%), Positives = 25/34 (73%)

Query:    56 PPSDEDWTTGICGCFSDLESCATGFLCPCVLFGR 89
             P ++ +W+TG C CFSD ++C   +LCPC+ FG+
Sbjct:    10 PHAEGEWSTGFCDCFSDCQNCCITWLCPCITFGQ 43

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2006772 PCR2 "AT1G14870" [Arabidopsis thaliana (taxid:3702)]

 Score = 118 (46.6 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
 Identities = 17/38 (44%), Positives = 26/38 (68%)

Query:    55 EPPSDEDWTTGICGCFSDLESCATGFLCPCVLFGRNVE 92
             +P ++ +W+TG C CFSD ++C   F CPC+ FG+  E
Sbjct:     9 KPHAEGEWSTGFCDCFSDCKNCCITFWCPCITFGQVAE 46

GO:0003674 "molecular_function" evidence=ND

GO:0005737 "cytoplasm" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0006979 "response to oxidative stress" evidence=IMP

TAIR|locus:2026910 PCR11 "AT1G68610" [Arabidopsis thaliana (taxid:3702)]

 Score = 115 (45.5 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
 Identities = 19/45 (42%), Positives = 30/45 (66%)

Query:   148 IYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREMKNH 192
             +Y+   R  L+ +Y+LK  PC  C VH C   CALCQE+R+++++
Sbjct:    79 LYSCFYRTKLRAQYNLKERPCCDCCVHFCCEPCALCQEYRQLQHN 123

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0048235 "pollen sperm cell differentiation" evidence=IEP

TAIR|locus:2016625 AT1G58320 "AT1G58320" [Arabidopsis thaliana (taxid:3702)]

 Score = 104 (41.7 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
 Identities = 25/61 (40%), Positives = 30/61 (49%)

Query:   146 CG-IYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREMKNHLSENASTAMTIV 204
             CG  Y    R  L+ +Y L  APC    +HC    CAL QEHRE+K H   + S    I 
Sbjct:    72 CGWYYASKYRAKLRHQYALPEAPCADGAIHCFCCPCALTQEHRELK-HRGLDPSLGWNIE 130

Query:   205 N 205
             N
Sbjct:   131 N 131

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

ASPGD|ASPL0000061958 AN0759 [Emericella nidulans (taxid:162425)]

 Score = 108 (43.1 bits), Expect = 4.0e-12, Sum P(2) = 4.0e-12
 Identities = 15/36 (41%), Positives = 25/36 (69%)

Query:    61 DWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRD 96
             +WT  + GCFS +E+C   + CPC+++G+  E L+D
Sbjct:     4 EWTNSVWGCFSPIETCFMSWCCPCMVYGKQSERLQD 39

GO:0008150 "biological_process" evidence=ND

GO:0005576 "extracellular region" evidence=IDA

GO:0003674 "molecular_function" evidence=ND

ZFIN|ZDB-GENE-070727-1 ponzr1 "plac8 onzin related protein 1" [Danio rerio (taxid:7955)]

 Score = 96 (38.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query:    53 SYEPPSDEDWTTGICGCFSDLESCATGFLC-PCV 85
             S +  S   WTTGIC C SD+ +C  GF C PC+
Sbjct:    10 STQRTSSGTWTTGICDCCSDMSTCCCGFWCFPCM 43

GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IMP

GO:0035775 "pronephric glomerulus morphogenesis" evidence=IMP

GO:0072078 "nephron tubule morphogenesis" evidence=IMP

TAIR|locus:2026905 AT1G68630 "AT1G68630" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
 Identities = 21/47 (44%), Positives = 26/47 (55%)

Query:    62 WTTGICGCFSDLESCATGFLCPCVLFGRNVETL-RDDIPWANACVCH 107
             WTTG+C C  D   C    + PCV F +NVE + R  IP  NA + H
Sbjct:    29 WTTGLCDCHEDAHICVQTAIMPCVSFAQNVEIVNRGTIPCMNAGLIH 75

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B6SGC5	CNR6_MAIZE	No assigned EC number	0.6331	0.9541	0.9581	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00019174001 SubName- Full=Chromosome chr15 scaffold_19, whole genome shotgun sequence; (238 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	240
TIGR01571	104	TIGR01571, A_thal_Cys_rich, uncharacterized Cys-ri	4e-27
pfam04749	99	pfam04749, PLAC8, PLAC8 family	2e-21

>gnl|CDD|233473 TIGR01571, A_thal_Cys_rich, uncharacterized Cys-rich domain

 Score = 99.8 bits (249), Expect = 4e-27
 Identities = 48/132 (36%), Positives = 62/132 (46%), Gaps = 28/132 (21%)

Query: 60  EDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAA 119
            +W+TG+  C  D+  C  G  CPC LFG+  ETL             G C+ GGL   A
Sbjct: 1   SNWSTGLFDCCEDIRLCLCGLFCPCCLFGQIAETLG---------TFAGECLCGGLTAIA 51

Query: 120 ATVLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHW 179
                          +C         CG YT  +R  L++KY ++ APCD CL H    +
Sbjct: 52  M------------SALC-------GFCGCYTCFIRIKLREKYGIQGAPCDDCLTHLFCCF 92

Query: 180 CALCQEHREMKN 191
           CALCQEHRE+K 
Sbjct: 93  CALCQEHRELKM 104

This model describes an uncharacterized domain of about 100 residues. It is common in plants but found also in Homo sapiens, Dictyostelium, and Leishmania; at least 12 distinct members are found in Arabidopsis. Most members of this family contain more than 10 per cent Cys, but no Cys residue is invariant across the family. Length = 104

>gnl|CDD|218240 pfam04749, PLAC8, PLAC8 family

 Score = 85.1 bits (211), Expect = 2e-21
 Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 29/128 (22%)

Query: 62  WTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAAT 121
           W+TG+  CF D+ +C  G  CPC+LFGR  E L D     +   C    + G L      
Sbjct: 1   WSTGLFDCFDDIGTCCLGLFCPCILFGRTAERLDDGSRSEDGSCCLYGLLYGLLG----- 55

Query: 122 VLFHGIDPKTSFLICEGLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCA 181
                                     +Y+   R  +++KY+++ +PCD CLVHC    CA
Sbjct: 56  ------------------------FWLYSCFTRTKIREKYNIEGSPCDDCLVHCFCPPCA 91

Query: 182 LCQEHREM 189
           LCQE RE+
Sbjct: 92  LCQEDREL 99

This family includes the Placenta-specific gene 8 protein. Length = 99

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	240
TIGR01571	104	A_thal_Cys_rich uncharacterized Cys-rich domain. T	99.97
PF04749	106	PLAC8: PLAC8 family; InterPro: IPR006461 This grou	99.94

>TIGR01571 A_thal_Cys_rich uncharacterized Cys-rich domain

Probab=99.97  E-value=7.3e-31  Score=206.38  Aligned_cols=104  Identities=46%  Similarity=0.991  Sum_probs=83.5

Q ss_pred             CCCCcCcccccCCccccccccchhhhhhhHHHhHhcCCCCCCccccccccccchhhHHHHHHhHhhccCCCcchhhhhhh
Q 046369           60 EDWTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWANACVCHGMCIEGGLALAAATVLFHGIDPKTSFLICEGL  139 (240)
Q Consensus        60 ~~WstGLfdC~~D~~~C~~~~fCPCv~~G~n~erl~~~~~~~~~C~C~~~~v~Gg~~~~~~ta~f~g~~P~~~~L~~~gl  139 (240)
                      ++|++||||||+|+++|++++||||+++|||++|++.+.   ++|.      ..++.+.+++++             .| 
T Consensus         1 ~~W~~gL~dC~~d~~~C~~~~~CPc~~~g~~~~~~~~~~---~~C~------~~~~~~~~~~~~-------------~~-   57 (104)
T TIGR01571         1 SNWSTGLFDCCEDIRLCLCGLFCPCCLFGQIAETLGTFA---GECL------CGGLTAIAMSAL-------------CG-   57 (104)
T ss_pred             CCCCCCCccccCChhHHHHHHHHHHHHHHHHHHHhCCCC---Cchh------hHHHHHHHHHHH-------------Hh-
Confidence            589999999999999999999999999999999999532   2443      122222211110             01 


Q ss_pred             hhhhhhhchhhhHHHHHHHHHhCCCCCCCCchhhhccchhhHHHHhHHHHHh
Q 046369          140 FFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREMKN  191 (240)
Q Consensus       140 ~f~w~~~~i~~~~~R~~IR~kY~I~Gs~~~Dc~~~~cC~~CaLcQe~REl~~  191 (240)
                           +.++|.+.+|++||+||||+|+.++||++++||++|+||||+||||+
T Consensus        58 -----~~~~~~~~~R~~~R~ry~i~gs~~~D~~~~~~C~~C~lcQ~~RElk~  104 (104)
T TIGR01571        58 -----FCGCYTCFIRIKLREKYGIQGAPCDDCLTHLFCCFCALCQEHRELKM  104 (104)
T ss_pred             -----HHHHHHHHHHHHHHHHhCCCCCCcccchHHHHhhhHHHHHHHHHHhC
Confidence                 22367889999999999999999999999999999999999999984

This model describes an uncharacterized domain of about 100 residues. It is common in plants but found also in Homo sapiens, Dictyostelium, and Leishmania; at least 12 distinct members are found in Arabidopsis. Most members of this family contain more than 10 per cent Cys, but no Cys residue is invariant across the family.

>PF04749 PLAC8: PLAC8 family; InterPro: IPR006461 This group of sequences are described by a region of about 170 amino acids

Probab=99.94  E-value=1.7e-27  Score=184.32  Aligned_cols=102  Identities=39%  Similarity=0.871  Sum_probs=79.2

Q ss_pred             CCcCcccccCCccccccccchhhhhhhHHHhHhcCCCCCCc----cccccccccchhhHHHHHHhHhhccCCCcchhhhh
Q 046369           62 WTTGICGCFSDLESCATGFLCPCVLFGRNVETLRDDIPWAN----ACVCHGMCIEGGLALAAATVLFHGIDPKTSFLICE  137 (240)
Q Consensus        62 WstGLfdC~~D~~~C~~~~fCPCv~~G~n~erl~~~~~~~~----~C~C~~~~v~Gg~~~~~~ta~f~g~~P~~~~L~~~  137 (240)
                      |++||||||+|+++|++++||||++++++++|++.+..+..    .|.           +.  ...+.          + 
T Consensus         1 W~~gl~~C~~d~~~c~~~~~cPc~~~~~~~~~l~~~~~~~~~~~~~C~-----------~~--~~~~~----------~-   56 (106)
T PF04749_consen    1 WSTGLCDCFSDPGSCCLACFCPCCSFGQNAERLGDGPRSRGPAFGSCC-----------LC--FCCFG----------C-   56 (106)
T ss_pred             CCCCCCCcCCChHHHHHHHHHHHHHHHHHHHHhccCCccCCCCCccHH-----------HH--HHHHH----------H-
Confidence            99999999999999999999999999999999998643321    221           00  00000          0 


Q ss_pred             hhhhhhhhhchhhhHHHHHHHHHhCCCCCCCCchhhhccchhhHHHHhHHHH
Q 046369          138 GLFFAWWMCGIYTGLLRQSLQKKYHLKNAPCDPCLVHCCLHWCALCQEHREM  189 (240)
Q Consensus       138 gl~f~w~~~~i~~~~~R~~IR~kY~I~Gs~~~Dc~~~~cC~~CaLcQe~REl  189 (240)
                      ..++  ++.++|.+.+|++||+||||+|+.++||++++||++|||+||+|||
T Consensus        57 ~~~~--~l~~~~~~~~R~~iR~ry~I~g~~~~D~~~~~~C~~Cal~Q~~rEl  106 (106)
T PF04749_consen   57 AACL--GLGWCYGCSLRQQIRERYGIQGSCCEDCCCSCCCPPCALCQEAREL  106 (106)
T ss_pred             HHHH--HHhHhhhhhHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHhhC
Confidence            0000  0123477899999999999999999999999999999999999996

These proteins have highly divergent N-terminal regions rich in low complexity sequence. PSI-BLAST reveals no clear similarity to any characterised protein. It is common in plants but found also in Homo sapiens (Human), Dictyostelium, and Leishmania; at least 12 distinct members are found in Arabidopsis. Most members of this family contain more than 10 per cent Cys, but no Cys residue is invariant across the family.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00