Citrus Sinensis ID: 046401

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------
Protein Sequence
MTLKHVFFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQADTRNCWPAMLTSLGFTAEEGNILRGYCDASSAPSPSGIAVIYQPQVSKVLA
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHccccHHHHHHHHcccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHccccccHHHHHHHHHHHHccccEEEEEEcccccccccHHHHHHHHcccHHHHHHHccccccccccccccHHHHHcHHHHHHcc
Coil and Loop (DISEMBL)
MTLKHVFFILAFTCLIIANIAnatsrndrlnnnmkpcnDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNsqadtrncwpamltslgftaeegnilrgycdassapspsgiaviyqpqvskvla
Flexible Loop (DISEMBL)
MTLKHVFFILAFTCLIIANIANatsrndrlnnnMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLnsqadtrnCWPAMLTSLGFTAEEGNILRGYCDASSAPspsgiaviyqpqvskvla
Low Complexity Region (SEG)
MTLKHVFFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQADTRNCWPAMLTSLGFTAEEGNILRGYCDASSAPSPSGIAVIYQPQVSKVLA
Disordered region (IsUnstruct)
***KHVFFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQADTRNCWPAMLTSLGFTAEEGNILRGYCDA********IAVIY*********
Disordered Region (DISOPRED)
*****VF*ILAFTCLIIANIANA****************************ECWNTLMELKSCSNEIVIFFLNSQADTRNCWPAMLTSLGFTAEEGNILRGYCDA*********AVIYQPQVSKVL*
Disordered Region (DISEMBL)
MTLKHVFFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQADTRNCWPAMLTSLGFTAEEGNILRGYCDASSAPSPSGIAVIYQPQVSKVLA
Disordered Region (DISPRO)
MTLKHVFFILAFTCLIIANIANATS*************D*VTR*EVSEGLTECWNTLMELKSCSNEIVIFFLNSQADTRNCWPAMLTSLGFTAEEGNILRGYCDASSAPSPSGIAVIYQPQVSKVLA
Transmembrane Helix (TMHMM)
ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MTLKHVFFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQADTRNCWPAMLTSLGFTAEEGNILRGYCDASSAPSPSGIAVIYQPQVSKVLA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	127	2.2.26 [Sep-21-2011]
Q9T039	127	Egg cell-secreted protein	yes	no	0.566	0.566	0.549	8e-20
Q9SJ24	125	Egg cell-secreted protein	no	no	0.448	0.456	0.565	2e-16
Q9SJ23	125	Egg cell-secreted protein	no	no	0.779	0.792	0.4	2e-16
Q9SRD8	158	Egg cell-secreted protein	no	no	0.551	0.443	0.426	1e-15
Q9FGG1	155	Egg cell-secreted protein	no	no	0.527	0.432	0.361	2e-09

>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1

 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 19/91 (20%)

Query: 39  DLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWPAML 86
           ++  RL+ S GL ECWN L ELKSC+NEIV+FFLN +              T NCWPAML
Sbjct: 35  NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query: 87  TSLGFTAEEGNILRGYC------DASSAPSP 111
           TSLGFT EE N+LRG+C      D+S APSP
Sbjct: 94  TSLGFTPEEANVLRGFCQNPNSGDSSPAPSP 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1

 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 12/69 (17%)

Query: 49  GLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEG 96
           GL ECWN L ELKSC+NEIV+FFLN +              T +CWPAMLTSLGFT++E 
Sbjct: 42  GLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDET 101

Query: 97  NILRGYCDA 105
           N+LRG+C +
Sbjct: 102 NVLRGFCQS 110

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1

 Score = 84.0 bits (206), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 67/120 (55%), Gaps = 21/120 (17%)

Query: 7   FFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNE 66
           F  +  T L++ N+++      R    +    ++  RL    GL +CW+ L ELKSC+NE
Sbjct: 7   FLFVTVTLLLVLNVSS------RALPPVADSTNIAARL-TGGGLMQCWDALYELKSCTNE 59

Query: 67  IVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEGNILRGYCDA--SSAPSPS 112
           IV+FFLN +              T +CWPAMLTSLGFT EE N+LRG+C +  S   SP+
Sbjct: 60  IVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQSPNSGGSSPA 119

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1

 Score = 81.6 bits (200), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 12/82 (14%)

Query: 36  PCNDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWP 83
           P   LV RL++ E    CW++LM+L+ CS E+++FFLN +               R CWP
Sbjct: 40  PTTSLVYRLKLDEDTGYCWDSLMQLQHCSGELILFFLNGETYIGPGCCSAIRTIGRKCWP 99

Query: 84  AMLTSLGFTAEEGNILRGYCDA 105
            M+  LGFTA+EG++L+GYCD 
Sbjct: 100 TMIGVLGFTAQEGDMLQGYCDG 121

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1

 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 27/94 (28%)

Query: 50  LTECWNTLMELKSCSNEIVIFFLNSQADT--------------------RNCWPAMLTSL 89
           L +CWN  +ELKSC++EIV FFL+    +                    ++CW  M TSL
Sbjct: 50  LMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVKDCWSVMFTSL 109

Query: 90  GFTAEEGNILRGYC-------DASSAPSPSGIAV 116
           G T  EGN LR YC       + S +P+P  +A+
Sbjct: 110 GLTTMEGNNLREYCEFQAEKSELSPSPAPETLAL 143

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
359482498	128	PREDICTED: uncharacterized protein LOC10	0.881	0.875	0.526	9e-28
296082551	135	unnamed protein product [Vitis vinifera]	0.771	0.725	0.586	4e-27
224060465	146	predicted protein [Populus trichocarpa]	0.669	0.582	0.536	3e-22
255578404	136	conserved hypothetical protein [Ricinus	0.826	0.772	0.476	4e-20
116830619	128	unknown [Arabidopsis thaliana]	0.566	0.562	0.549	6e-18
15235039	127	uncharacterized protein [Arabidopsis tha	0.566	0.566	0.549	6e-18
297802032	127	hypothetical protein ARALYDRAFT_490711 [	0.763	0.763	0.442	2e-16
255578398	135	conserved hypothetical protein [Ricinus	0.433	0.407	0.594	7e-16
297825031	125	hypothetical protein ARALYDRAFT_900605 [	0.519	0.528	0.511	2e-15
116830473	126	unknown [Arabidopsis thaliana]	0.448	0.452	0.565	1e-14

>gi|359482498|ref|XP_002274398.2| PREDICTED: uncharacterized protein LOC100260034 [Vitis vinifera] gi|147772490|emb|CAN65099.1| hypothetical protein VITISV_039724 [Vitis vinifera] gi|297743029|emb|CBI35896.3| unnamed protein product [Vitis vinifera]

 Score =  128 bits (321), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 69/131 (52%), Positives = 82/131 (62%), Gaps = 19/131 (14%)

Query: 1   MTLKHVFFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMEL 60
           M LK +F ++A T L+    ANA +  D   N   P  DL TRLE S GL ECWN LME+
Sbjct: 1   MALKTLFLLVALTWLM----ANAAATRDLPTN---PGLDLTTRLETSGGLVECWNALMEI 53

Query: 61  KSCSNEIVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEGNILRGYCDASSA 108
           + C+NEI++FFLN Q              TRNCWPAMLTSLGFTAEEGNIL+GYC+ASS 
Sbjct: 54  RQCTNEIILFFLNGQTVLGPECCQAISIITRNCWPAMLTSLGFTAEEGNILQGYCNASSG 113

Query: 109 PSPSGIAVIYQ 119
           P       +YQ
Sbjct: 114 PPTPASPPLYQ 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082551|emb|CBI21556.3| unnamed protein product [Vitis vinifera]

 Score =  125 bits (315), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 68/116 (58%), Positives = 81/116 (69%), Gaps = 18/116 (15%)

Query: 3   LKHVFFILAFTCLIIANIANATSRNDRLNNNMKPCN-DLVTRLEVSEGLTECWNTLMELK 61
           +K+VF ++A + LI     NA++  + L  +MKP   DLV RLE S GL ECWN L+ELK
Sbjct: 4   IKNVFLLVALSWLI----TNASASRE-LPMSMKPAELDLVARLETSGGLVECWNALVELK 58

Query: 62  SCSNEIVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEGNILRGYCDA 105
           SC+NEI++FFLN QAD            TRNCWP MLTSLGFTAEEGNILRGYCDA
Sbjct: 59  SCTNEIILFFLNGQADIGPDCCGAIDIITRNCWPTMLTSLGFTAEEGNILRGYCDA 114

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060465|ref|XP_002300213.1| predicted protein [Populus trichocarpa] gi|222847471|gb|EEE85018.1| predicted protein [Populus trichocarpa]

 Score =  109 bits (273), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/110 (53%), Positives = 66/110 (60%), Gaps = 25/110 (22%)

Query: 38  NDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWPAM 85
           N L  RLE    L ECWN L+E+KSC+NEIV+FF+  QAD            T NCWPAM
Sbjct: 36  NSLSARLEDEGSLVECWNALVEIKSCTNEIVLFFMTGQADIGPDCCRAIHTITHNCWPAM 95

Query: 86  LTSLGFTAEEGNILRGYCDAS-----------SAPSP--SGIAVIYQPQV 122
            TSLGFT EEGNILRGYCDAS           SAPSP  +G    YQP +
Sbjct: 96  FTSLGFTDEEGNILRGYCDASPNSPSIYFSPASAPSPLAAGAPAQYQPML 145

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578404|ref|XP_002530067.1| conserved hypothetical protein [Ricinus communis] gi|223530420|gb|EEF32307.1| conserved hypothetical protein [Ricinus communis]

 Score =  102 bits (255), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/126 (47%), Positives = 74/126 (58%), Gaps = 21/126 (16%)

Query: 1   MTLKHVFFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLE--VSEGLTECWNTLM 58
           M  K +  +L  T +I    A+AT+  D         N L  R+E   S  L +CWN L+
Sbjct: 1   MAFKIMTLLLGLTLVI----ASATAARDV---PFISGNSLEARIEGSSSSSLVDCWNALI 53

Query: 59  ELKSCSNEIVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEGNILRGYCDAS 106
           E+KSCSNEI++FFLN   D            T NCWPAMLTS+GFTAEEGNILRGYCD +
Sbjct: 54  EIKSCSNEIILFFLNGHTDIGADCCRSIAIFTHNCWPAMLTSIGFTAEEGNILRGYCDNA 113

Query: 107 SAPSPS 112
           S+ S S
Sbjct: 114 SSSSTS 119

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830619|gb|ABK28267.1| unknown [Arabidopsis thaliana]

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 19/91 (20%)

Query: 39  DLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWPAML 86
           ++  RL+ S GL ECWN L ELKSC+NEIV+FFLN +              T NCWPAML
Sbjct: 35  NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query: 87  TSLGFTAEEGNILRGYC------DASSAPSP 111
           TSLGFT EE N+LRG+C      D+S APSP
Sbjct: 94  TSLGFTPEEANVLRGFCQNPNSGDSSPAPSP 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235039|ref|NP_195644.1| uncharacterized protein [Arabidopsis thaliana] gi|75213705|sp|Q9T039.1|EC14_ARATH RecName: Full=Egg cell-secreted protein 1.4; Flags: Precursor gi|4914446|emb|CAB43649.1| hypothetical protein [Arabidopsis thaliana] gi|7270918|emb|CAB80597.1| hypothetical protein [Arabidopsis thaliana] gi|91805627|gb|ABE65542.1| hypothetical protein At4g39340 [Arabidopsis thaliana] gi|332661658|gb|AEE87058.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 95.5 bits (236), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 19/91 (20%)

Query: 39  DLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWPAML 86
           ++  RL+ S GL ECWN L ELKSC+NEIV+FFLN +              T NCWPAML
Sbjct: 35  NIAARLQ-SGGLMECWNALYELKSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAML 93

Query: 87  TSLGFTAEEGNILRGYC------DASSAPSP 111
           TSLGFT EE N+LRG+C      D+S APSP
Sbjct: 94  TSLGFTPEEANVLRGFCQNPNSGDSSPAPSP 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802032|ref|XP_002868900.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata] gi|297314736|gb|EFH45159.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata]

 Score = 90.5 bits (223), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 63/113 (55%), Gaps = 16/113 (14%)

Query: 4   KHVFFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSC 63
            H  F+ +   L+I  +    S  D      +   ++  RL+ S GL ECWN L ELKSC
Sbjct: 3   SHTTFLFSTVTLLILFLNTTVSGRDL---PAESSTNIAARLQ-SGGLMECWNVLYELKSC 58

Query: 64  SNEIVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEGNILRGYCD 104
           +NEIV+FFLN +              T NCWPAMLTSLGFT EE N+LRG+C 
Sbjct: 59  TNEIVLFFLNGETKLGVSCCEAVDIITTNCWPAMLTSLGFTPEEANVLRGFCQ 111

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578398|ref|XP_002530064.1| conserved hypothetical protein [Ricinus communis] gi|223530417|gb|EEF32304.1| conserved hypothetical protein [Ricinus communis]

 Score = 88.6 bits (218), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/69 (59%), Positives = 46/69 (66%), Gaps = 14/69 (20%)

Query: 49  GLTECWNTLMELKSCSNEIVIFFLNSQAD--------------TRNCWPAMLTSLGFTAE 94
           GL +CWN LME+KSCSNEI++FFLN Q D                NCWP+MLTSLGFT E
Sbjct: 50  GLVDCWNALMEIKSCSNEIILFFLNGQTDITIGADCCSAISIIAHNCWPSMLTSLGFTVE 109

Query: 95  EGNILRGYC 103
           E NIL GYC
Sbjct: 110 EVNILNGYC 118

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825031|ref|XP_002880398.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata] gi|297326237|gb|EFH56657.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata]

 Score = 87.4 bits (215), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 55/84 (65%), Gaps = 18/84 (21%)

Query: 49  GLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEG 96
           GL +CW+ L ELKSC+NEIV+FFLN +              T +CWPAMLTSLGFT+EE 
Sbjct: 42  GLMQCWDALYELKSCTNEIVLFFLNGETKLGSGCCNAVDVITTDCWPAMLTSLGFTSEET 101

Query: 97  NILRGYCD------ASSAPSPSGI 114
           N+LRG+C       +S APSP+ +
Sbjct: 102 NVLRGFCQSPTSGGSSPAPSPAEV 125

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830473|gb|ABK28194.1| unknown [Arabidopsis thaliana]

 Score = 84.7 bits (208), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 12/69 (17%)

Query: 49  GLTECWNTLMELKSCSNEIVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEG 96
           GL ECWN L ELKSC+NEIV+FFLN +              T +CWPAMLTSLGFT++E 
Sbjct: 42  GLMECWNALYELKSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDET 101

Query: 97  NILRGYCDA 105
           N+LRG+C +
Sbjct: 102 NVLRGFCQS 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
TAIR|locus:2136293	127	EC1.4 "AT4G39340" [Arabidopsis	0.834	0.834	0.457	1.9e-19
TAIR|locus:2052536	125	EC1.2 "AT2G21740" [Arabidopsis	0.795	0.808	0.411	3.6e-18
TAIR|locus:2052556	125	EC1.3 "AT2G21750" [Arabidopsis	0.779	0.792	0.4	1.4e-16
TAIR|locus:2030136	158	EC1.1 "AT1G76750" [Arabidopsis	0.803	0.645	0.333	2.3e-14
TAIR|locus:2176080	155	EC1.5 "AT5G64720" [Arabidopsis	0.330	0.270	0.404	1.3e-11

TAIR|locus:2136293 EC1.4 "AT4G39340" [Arabidopsis thaliana (taxid:3702)]

 Score = 232 (86.7 bits), Expect = 1.9e-19, P = 1.9e-19
 Identities = 59/129 (45%), Positives = 70/129 (54%)

Query:     1 MTLKHVFFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMEL 60
             M     F     T LII  + N T     L    +   ++  RL+ S GL ECWN L EL
Sbjct:     1 MASNTTFLFSTVTLLII--LLNTTVSGRDLP--AESSTNIAARLQ-SGGLMECWNALYEL 55

Query:    61 KSCSNEIVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEGNILRGYC----- 103
             KSC+NEIV+FFLN +              T NCWPAMLTSLGFT EE N+LRG+C     
Sbjct:    56 KSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLRGFCQNPNS 115

Query:   104 -DASSAPSP 111
              D+S APSP
Sbjct:   116 GDSSPAPSP 124

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052536 EC1.2 "AT2G21740" [Arabidopsis thaliana (taxid:3702)]

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 51/124 (41%), Positives = 68/124 (54%)

Query:     7 FFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNE 66
             F       L++ NI+  T      + N      +  RL    GL ECWN L ELKSC+NE
Sbjct:     7 FLFATIAILLVLNISGRTLPETEDSTN------IAARLN-GGGLMECWNALYELKSCTNE 59

Query:    67 IVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEGNILRGYCDA----SSAPS 110
             IV+FFLN +              T +CWPAMLTSLGFT++E N+LRG+C +     S+P+
Sbjct:    60 IVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQSPNSGGSSPA 119

Query:   111 PSGI 114
             PS +
Sbjct:   120 PSSV 123

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052556 EC1.3 "AT2G21750" [Arabidopsis thaliana (taxid:3702)]

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 48/120 (40%), Positives = 67/120 (55%)

Query:     7 FFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNE 66
             F  +  T L++ N+++      R    +    ++  RL    GL +CW+ L ELKSC+NE
Sbjct:     7 FLFVTVTLLLVLNVSS------RALPPVADSTNIAARL-TGGGLMQCWDALYELKSCTNE 59

Query:    67 IVIFFLNSQAD------------TRNCWPAMLTSLGFTAEEGNILRGYCDA--SSAPSPS 112
             IV+FFLN +              T +CWPAMLTSLGFT EE N+LRG+C +  S   SP+
Sbjct:    60 IVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQSPNSGGSSPA 119

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2030136 EC1.1 "AT1G76750" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 38/114 (33%), Positives = 60/114 (52%)

Query:     7 FFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNE 66
             F I+    ++ ++   A            P   LV RL++ E    CW++LM+L+ CS E
Sbjct:    11 FNIVTLMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSGE 70

Query:    67 IVIFFLNSQADT------------RNCWPAMLTSLGFTAEEGNILRGYCDASSA 108
             +++FFLN +               R CWP M+  LGFTA+EG++L+GYCD + +
Sbjct:    71 LILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCDGNDS 124

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0048240 "sperm capacitation" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2176080 EC1.5 "AT5G64720" [Arabidopsis thaliana (taxid:3702)]

 Score = 91 (37.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
 Identities = 19/47 (40%), Positives = 26/47 (55%)

Query:    79 RNCWPAMLTSLGFTAEEGNILRGYCDASS-----APSPSGIAVIYQP 120
             ++CW  M TSLG T  EGN LR YC+  +     +PSP+   +   P
Sbjct:    99 KDCWSVMFTSLGLTTMEGNNLREYCEFQAEKSELSPSPAPETLALSP 145

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005576 "extracellular region" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00034113001 SubName- Full=Putative uncharacterized protein (Chromosome chr9 scaffold_7, whole genome shotgun sequence); (128 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	127
pfam05617	67	pfam05617, Prolamin_like, Prolamin-like	1e-04

>gnl|CDD|218659 pfam05617, Prolamin_like, Prolamin-like

 Score = 37.1 bits (86), Expect = 1e-04
 Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 14/67 (20%)

Query: 52  ECWNTLME-LKSCSNEIVIFFLNSQAD------------TRNCWPAMLTSLGFTAE-EGN 97
           +CW+     +  C +EI      ++ +              +CWPA+             
Sbjct: 1   KCWSACAVKIPGCVDEIFASIFGNKGNLGPDCCQAILKIGDDCWPALFKMFPSLPFFPPK 60

Query: 98  ILRGYCD 104
           +L+ YC 
Sbjct: 61  LLKNYCS 67

Both DUF784 and DUF1278 members are found to be expressed in the plant embryo sac and are regulated by the Myb98 transcription factor. Computational analysis has revealed that they are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to the typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, both DUF784 and DUF1278 domains only contain six conserved Cys residues that may form three pairs of disulfide bonds. These two domains may have potential functions in lipid transfer or protection during plant embryo sac development and reproduction. This family has been merged with the DUF1278 family. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	127
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.36
PLN00213	118	predicted protein; Provisional	99.35
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	95.47

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.36  E-value=4.2e-13  Score=87.67  Aligned_cols=53  Identities=25%  Similarity=0.547  Sum_probs=48.9

Q ss_pred             hHHhhhhhcchhHHHHHHHHhcCc-CC------------CCCchhhHhhhcCCCcchhh----hhhhccc
Q 046401           52 ECWNTLMELKSCSNEIVIFFLNSQ-AD------------TRNCWPAMLTSLGFTAEEGN----ILRGYCD  104 (127)
Q Consensus        52 ~CW~sL~elksCt~EIvlFFLnGe-t~------------~~~CWP~Ml~slGFT~eE~d----iLrGyCd  104 (127)
                      +||+++.++++|.+||+.+|+||+ ..            +++|||+|+..+++++++..    .|++||+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C~~~l~~~~~~~p~~~~~~r~~l~~~C~   70 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAINKMGKDCHPALFKMFPFTPFFKPLLRDLLWNHCS   70 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHHHHhHhHHHHHHHHccCCCCccchhHHHHHhhcC
Confidence            599999999999999999999988 33            99999999999999999888    9999996

>PLN00213 predicted protein; Provisional

Probab=99.35  E-value=2.1e-12  Score=97.27  Aligned_cols=105  Identities=22%  Similarity=0.438  Sum_probs=74.4

Q ss_pred             CcchhHHHHHHHHHHHHHhhhhhcccccccCCCCCCCCchhhhhccCCchhhHHhhhhhcchhHHHHHHHHhcCcCC---
Q 046401            1 MTLKHVFFILAFTCLIIANIANATSRNDRLNNNMKPCNDLVTRLEVSEGLTECWNTLMELKSCSNEIVIFFLNSQAD---   77 (127)
Q Consensus         1 Ma~~~~fl~~~l~ll~~a~~~~~~~~r~l~~~~m~~~~~L~~RL~~~~~~~~CW~sL~elksCt~EIvlFFLnGet~---   77 (127)
                      |..|+++.+++++.+++.-|+. ...+.-+.+.+-+.    .++.+-.+...||++|+.++.|..||...-.+||.+   
T Consensus         1 m~iknV~~ll~v~cIvvsVna~-lpqf~~~fp~~~p~----~~~pg~pd~~kCwSSl~~vpGCv~EI~~si~~gkf~~Ig   75 (118)
T PLN00213          1 MSIKNVFLLLAVLCIIVSVNAQ-LPQFPAQLPFLFPF----QLIPGLPDITKCFSSVMDIPGCIAEISQSIFTGKFGNLG   75 (118)
T ss_pred             CchHHHHHHHHHHHHHheeccC-CCCCCCCCCCCCCc----cCCCCCccHHHHHHHHcCCcchHHHHHHHHHhchhcccc
Confidence            8899999888888775532211 01111111110011    334455577889999999999999999999999996   


Q ss_pred             ---------CCCchhhHhhhcCCCcchhhhhhhcccCCCCCCCCcc
Q 046401           78 ---------TRNCWPAMLTSLGFTAEEGNILRGYCDASSAPSPSGI  114 (127)
Q Consensus        78 ---------~~~CWP~Ml~slGFT~eE~diLrGyCd~~~~~s~~~~  114 (127)
                               +++|||+| ....|.   ...||+.|...+.+++|++
T Consensus        76 ~aCCKAf~~~dnCwP~~-P~~P~f---Pp~LK~~Cs~i~~~~~~~~  117 (118)
T PLN00213         76 PACCKAFLDADNCIPKI-PFIPFF---PPMLKEQCSRVAGATPPIP  117 (118)
T ss_pred             hHHHHHHHhhhccccCC-cCCCcc---chHHHHHHhcccCCCCCCC
Confidence                     66999996 755555   7889999999987777654

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=95.47  E-value=0.01  Score=42.70  Aligned_cols=28  Identities=18%  Similarity=0.294  Sum_probs=16.8

Q ss_pred             CcchhHHHHHHHHHHHHHhhhhhcccccc
Q 046401            1 MTLKHVFFILAFTCLIIANIANATSRNDR   29 (127)
Q Consensus         1 Ma~~~~fl~~~l~ll~~a~~~~~~~~r~l   29 (127)
                      ||||. ||+++|.|.++..+++.+++|++
T Consensus         1 MaSK~-~llL~l~LA~lLlisSevaa~~~   28 (95)
T PF07172_consen    1 MASKA-FLLLGLLLAALLLISSEVAAREL   28 (95)
T ss_pred             CchhH-HHHHHHHHHHHHHHHhhhhhHHh
Confidence            99776 44444443333334468888888

Some of them may be involved in resistance to environmental stress [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00