Citrus Sinensis ID: 046680

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340---
Protein Sequence
MKGRRSSSDSSSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNRHPAGHQI
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccEEEEccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccEEEEEEEEcccccccEEEEEEEccccHHHHHHHHcccHHHHcccccccccccccccccccccEEEEcccccccccccEEEEEEccEEccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccHHHHEEEcccccccccEEEEEEEEEEEccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccHcHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccccccEEEccccccccEEEEEEEccccccccEEEEEEcccHHHcccHEEEEccHHHHccccccccccccccccccccccEcccHHHHHHcccccEEEEccccEEEEccccEEcccccccccccccccccHHHcccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHccccccccEEEEEEEEcccEEEEccEEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEcccccccccc
Coil and Loop (DISEMBL)
mkgrrsssdsssssktkkpqyskftqqelsackpiltpgyVIGIFIIVGVIFIPVGIISLFASENVVEIVDrydegcippnysddMLAYIQnsdtnktctrslkatklmkspVYIYYQLDNFYQNHRRYVKsrndkqlwskkhedetkncapeatsnglsivpcGLIAWslfndsygfsikNKMVKVSKKNiawesdkkhkfgsdvypknfqngvligggklnssiplskQEALIVWMRTAALPTFRKLYGRiesdiqanDSVTVIIEnnyntysfggkkKLVLSTTTwiggkndfLGIAYITVGGLCLFLAISFILVYVvmprplgdpaflswnrhpaghqi
Flexible Loop (DISEMBL)
mkgrrsssdsssssktkkpqyskftqqelSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNdkqlwskkhedetkncapeatsnglsIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIawesdkkhkfgsdvypkNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIEsdiqandsVTVIIENNyntysfggkKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNRHPAGHQI
Low Complexity Region (SEG)
MKGRRsssdsssssKTKKPQYSKFTQQELSACKPILTpgyvigifiivgvifipvgiiSLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNRHPAGHQI
Disordered region (IsUnstruct)
****************************LSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVK*************************NGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSW*********
Disordered Region (DISOPRED)
***********************FTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPAFL***********
Disordered Region (DISEMBL)
*************************QQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNRHPAGHQI
Disordered Region (DISPRO)
******************PQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKH**ETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNR*******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKGRRSSSDSSSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNRHPAGHQI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	343	2.2.26 [Sep-21-2011]
Q8L8W0	350	ALA-interacting subunit 5	yes	no	0.950	0.931	0.645	1e-130
Q9SLK2	349	ALA-interacting subunit 3	no	no	0.947	0.931	0.659	1e-130
Q9LTW0	350	ALA-interacting subunit 1	no	no	0.947	0.928	0.650	1e-127
Q9SA35	336	Putative ALA-interacting	no	no	0.927	0.946	0.642	1e-125
Q67YS6	343	Putative ALA-interacting	no	no	0.959	0.959	0.554	1e-106
Q1MTQ5	396	Meiotically up-regulated	yes	no	0.953	0.825	0.371	1e-49
Q5F362	372	Cell cycle control protei	yes	no	0.877	0.809	0.412	1e-46
Q8BHG3	353	Cell cycle control protei	yes	no	0.892	0.866	0.347	1e-45
P53740	393	Uncharacterized protein Y	yes	no	0.962	0.839	0.328	5e-45
Q3MIR4	351	Cell cycle control protei	yes	no	0.895	0.874	0.343	5e-44

>sp|Q8L8W0|ALIS5_ARATH ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1

 Score =  464 bits (1195), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 211/327 (64%), Positives = 268/327 (81%), Gaps = 1/327 (0%)

Query: 16  TKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDE 75
           +K+P+YS+FTQQEL ACKPILTP +VI  F++ GV+FIP+G+I LFAS+ VVEIVDRYD 
Sbjct: 25  SKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDRYDT 84

Query: 76  GCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRND 135
            CIP +  ++M+AYIQ  + +K C R++  TK MK PVY+YYQL+NFYQNHRRYVKSRND
Sbjct: 85  DCIPTSSRNNMVAYIQ-GEGDKICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSRND 143

Query: 136 KQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWE 195
            QL S K E + K CAPE    G  IVPCGL+AWSLFND+Y FS  ++ + V+KK I+W+
Sbjct: 144 AQLRSPKEEHDVKTCAPEDNVGGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISWK 203

Query: 196 SDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIES 255
           SD+++KFG +V+PKNFQ G  IGGG LN S PLS+QE LIVWMRTAALPTFRKLYG+IE+
Sbjct: 204 SDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKIET 263

Query: 256 DIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISF 315
           D+ A D++TV+++NNYNTYSF G+KKLVLSTT+W+GG+NDFLGIAY+TVG +CLFLA++F
Sbjct: 264 DLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVTF 323

Query: 316 ILVYVVMPRPLGDPAFLSWNRHPAGHQ 342
            ++Y+V PR LGDP++LSWNR   G Q
Sbjct: 324 AVLYLVKPRQLGDPSYLSWNRSAGGLQ 350

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SLK2|ALIS3_ARATH ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1

 Score =  463 bits (1191), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 215/326 (65%), Positives = 262/326 (80%), Gaps = 1/326 (0%)

Query: 16  TKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDE 75
           +K+P+YSKFTQQEL ACKPILTPG+VI  F+IV VIFIP+G+ISLFAS++VVEIVDRYD 
Sbjct: 25  SKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDRYDT 84

Query: 76  GCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRND 135
            CIP     + +AYIQ  D +K C R LK TK MK P+Y+YYQL+NFYQNHRRYVKSR+D
Sbjct: 85  ECIPAPARTNKVAYIQ-GDGDKVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSRSD 143

Query: 136 KQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWE 195
            QL S K+E++   C PE    G  IVPCGLIAWSLFND+Y  S  N  + V+KK IAW+
Sbjct: 144 SQLRSTKYENQISACKPEDDVGGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIAWK 203

Query: 196 SDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIES 255
           SDK+HKFG+ V+PKNFQ G + GG  L+  IPLS+QE LIVWMRTAALPTFRKLYG+IES
Sbjct: 204 SDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKIES 263

Query: 256 DIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISF 315
           D++  D++ V + NNYNTYSF GKKKLVLSTT+W+GGKNDFLGIAY+TVGG+C  LA++F
Sbjct: 264 DLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILALAF 323

Query: 316 ILVYVVMPRPLGDPAFLSWNRHPAGH 341
            ++Y+V PR LGDP++LSWNR+P G 
Sbjct: 324 TIMYLVKPRRLGDPSYLSWNRNPGGR 349

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LTW0|ALIS1_ARATH ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1

 Score =  454 bits (1169), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 212/326 (65%), Positives = 262/326 (80%), Gaps = 1/326 (0%)

Query: 16  TKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDE 75
           +K+P+YSKFTQQEL ACKPILTPG+VI  F+I+ VIFIP+G+ISLFAS++VVEIVDRYD 
Sbjct: 26  SKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRYDS 85

Query: 76  GCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRND 135
            CIP +   + +AYIQ +  NK+CTR+L   K MK P+Y+YYQL+NFYQNHRRYVKSR+D
Sbjct: 86  ACIPLSDRANKVAYIQGTG-NKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSRSD 144

Query: 136 KQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWE 195
            QL S K E++   C PE    G  IVPCGLIAWSLFND+Y  S  N+ + V+KK IAW+
Sbjct: 145 SQLRSVKDENQIDACKPEDDFGGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIAWK 204

Query: 196 SDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIES 255
           SDK+HKFG +V+PKNFQ G L GG  L+ + PLS QE LIVWMRTAALPTFRKLYG+IES
Sbjct: 205 SDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKIES 264

Query: 256 DIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISF 315
           D++  +++ V ++NNYNTYSF GKKKLVLSTT+W+GGKNDFLGIAY+TVGG+C  LA++F
Sbjct: 265 DLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLALAF 324

Query: 316 ILVYVVMPRPLGDPAFLSWNRHPAGH 341
            ++Y+V PR LGDP +LSWNR P G 
Sbjct: 325 TVMYLVKPRRLGDPTYLSWNRIPGGR 350

Required for the lipid transport activity of the ALA/ALIS P4-ATPase complex.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SA35|ALIS4_ARATH Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=2

 Score =  449 bits (1156), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 205/319 (64%), Positives = 261/319 (81%), Gaps = 1/319 (0%)

Query: 22  SKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPN 81
           S+FTQQEL ACKPILTP +VI  F++ GV+FIP+G+I LFAS+ V+EIVDRYD  CIP +
Sbjct: 17  SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLS 76

Query: 82  YSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSK 141
             D+ + YIQ  + +K C R++  TK MK+PVY+YYQL+N+YQNHRRYVKSR D QL S 
Sbjct: 77  SRDNKVRYIQGLE-DKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSP 135

Query: 142 KHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKKHK 201
           K E ETK+CAPE T  G  IVPCGL+AWSLFND+Y F+  N+ + V+KK+I+W+SD++ K
Sbjct: 136 KDEHETKSCAPEDTLGGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESK 195

Query: 202 FGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQAND 261
           FG +V+PKNFQ G LIGG  L+  IPLS+QE LIVWMRTAALPTFRKLYG+I++D+QA D
Sbjct: 196 FGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGD 255

Query: 262 SVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVV 321
           ++ V+++NNYNTYSF GKKKLVLSTT+W+GG+NDFLGIAY+TVG +CLFLA+SF ++Y+ 
Sbjct: 256 TIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLA 315

Query: 322 MPRPLGDPAFLSWNRHPAG 340
            PR LGDP++LSWNR   G
Sbjct: 316 KPRQLGDPSYLSWNRSAGG 334

Arabidopsis thaliana (taxid: 3702)

>sp|Q67YS6|ALIS2_ARATH Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1

 Score =  385 bits (989), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 184/332 (55%), Positives = 239/332 (71%), Gaps = 3/332 (0%)

Query: 5   RSSSDSSSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASE 64
           R+   SS     +     +F QQ+L ACKP+LTP  VI +F+++G +FIP+G+I+L AS 
Sbjct: 10  RAPDQSSFLRSRRSKALYQFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASR 69

Query: 65  NVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQ 124
           + +EI+DRYD  CIP  Y  + L YI +S   K CTR LK  K MK+P++IYYQLDN+YQ
Sbjct: 70  DAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQ 129

Query: 125 NHRRYVKSRNDKQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKM 184
           NHRRYVKSR+D+QL        T +C PE +SNGL IVPCGLIAWS+FND++ FS +   
Sbjct: 130 NHRRYVKSRSDQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFNDTFTFSRERTK 189

Query: 185 VKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALP 244
           + VS+ NIAW+SD++HKFG +VYP NFQNG LIGG KL+  IPLS QE  IVWMR AAL 
Sbjct: 190 LNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALL 249

Query: 245 TFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITV 304
           +FRKLYGRIE D++    V V + NNYNTYSF G+KKL+LST+ W+GG+NDFLGI Y+ V
Sbjct: 250 SFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVV 309

Query: 305 GGLCLFLAISFILVYVVMPRPLGDPAFLSWNR 336
           G   + ++I F+L+++  PRP GD    SWN+
Sbjct: 310 GSSSIVISIIFMLLHLKNPRPYGDN---SWNK 338

Arabidopsis thaliana (taxid: 3702)

>sp|Q1MTQ5|MUG89_SCHPO Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=mug89 PE=1 SV=1

 Score =  197 bits (500), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/374 (37%), Positives = 197/374 (52%), Gaps = 47/374 (12%)

Query: 8   SDSSSS---SKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASE 64
           SD++S+   +KT+ P  + F QQ + + +P+LTP  V+ +F ++G+IF P+G   L+AS 
Sbjct: 10  SDTASNGPVAKTRAPPNTSFRQQRIKSWQPLLTPKIVLPLFFVLGIIFGPLGGGLLYASS 69

Query: 65  NVVEIV---------DRYDEGCIPPN--YSDDM----------------LAYIQNSDTNK 97
            V E+V           YDE    P+  Y+                   L  I + D + 
Sbjct: 70  IVQELVVDYTDCETLASYDEFSAVPSKKYTASFDQSGTIGFDKESTYWKLEKILDKDLDM 129

Query: 98  T---CTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKK-HEDETK--NCA 151
               C        ++K+P++IYY+L NF+QNHRRY KS ++KQL       DE K  NC 
Sbjct: 130 DVNYCIIRFTVPSVLKAPIFIYYRLTNFFQNHRRYAKSVDEKQLQGVALTADEVKGGNCF 189

Query: 152 P-EATSNGLSIVPCGLIAWSLFNDSYGFSIK----NKMVKVSKKNIAWESDKKHKFGSDV 206
           P E   +     PCGLIA SLFND++  S++    N +   S KNIAW SDK+    ++ 
Sbjct: 190 PLEVNEDDKPYYPCGLIANSLFNDTFS-SLRLLDDNSVYTFSTKNIAWASDKRRFLKTNY 248

Query: 207 YPKNFQ---NGVL-IGGGKLNSSIP-LSKQEALIVWMRTAALPTFRKLYGRIESDIQAND 261
            P +     N VL    G   S++P LS  E L VWMRTA LPTF KL  R ++D     
Sbjct: 249 SPDDVAPPPNWVLRYPDGYTESNMPDLSTMENLQVWMRTAGLPTFSKLAMRNDNDDIFPG 308

Query: 262 SVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVV 321
           +  + I   +   SF G K LVL+T + +GGKN FLGIAYI V  +C+ L   F L + +
Sbjct: 309 TYEIKIGLFFPVKSFDGTKSLVLTTRSVLGGKNPFLGIAYIVVSAVCVVLGTVFTLRHFI 368

Query: 322 MPRPLGDPAFLSWN 335
            PR L D  +L+W+
Sbjct: 369 RPRKLADHRYLNWD 382

Has a role in meiosis.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q5F362|CC50A_CHICK Cell cycle control protein 50A OS=Gallus gallus GN=TMEM30A PE=2 SV=1

 Score =  187 bits (475), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 183/330 (55%), Gaps = 29/330 (8%)

Query: 15  KTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYD 74
           KT+KP  + F QQ L A +PILT G V+  F I+G+IFIP+GI     S N+ E    Y 
Sbjct: 33  KTRKPDNTAFKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIREYEIDY- 91

Query: 75  EGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRN 134
            G  P +  +  L    +S    TCT +       +S V++YY L NFYQNHRRYVKSR+
Sbjct: 92  TGVEPSSPCNKCLNVSWDSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVKSRD 151

Query: 135 DKQLWSKKHE--DETKNCAPEATSNGLSIVPCGLIAWSLFNDSYG-FSIKNKM---VKVS 188
           D QL        + +K C P  T+    I PCG IA S+FND+   + I+N     + + 
Sbjct: 152 DSQLNGDNSSLLNPSKECEPYRTNEDKPIAPCGAIANSMFNDTLELYHIENDTRTAITLI 211

Query: 189 KKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGK---LNSSIPLSK-----------QEAL 234
           KK IAW +DK  KF +   PK   N   +  G    +N   P+              E  
Sbjct: 212 KKGIAWWTDKNVKFRN---PKGDGNLTALFQGTTKPVNWPKPVYMLDSEPDNNGFINEDF 268

Query: 235 IVWMRTAALPTFRKLYGRIE--SDIQAN---DSVTVIIENNYNTYSFGGKKKLVLSTTTW 289
           IVWMRTAALPTFRKLY  IE  S++Q        ++ I  NY  +SF G+K+++LST +W
Sbjct: 269 IVWMRTAALPTFRKLYRLIERKSNLQPTLQAGKYSLNITYNYPVHSFDGRKRMILSTISW 328

Query: 290 IGGKNDFLGIAYITVGGLCLFLAISFILVY 319
           +GGKN FLGIAYITVG +C FL +  ++++
Sbjct: 329 MGGKNPFLGIAYITVGSICFFLGVVLLIIH 358

Gallus gallus (taxid: 9031)

>sp|Q8BHG3|CC50B_MOUSE Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1

 Score =  184 bits (466), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 172/342 (50%), Gaps = 36/342 (10%)

Query: 10  SSSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEI 69
           S+++    +P  + FTQQ L A +P+L+ G  + +F   G+ FI +G+   ++S  + E+
Sbjct: 4   SATARGAHQPDNTAFTQQRLPAWQPLLSAGIALPLFFCAGLAFIGLGLGLFYSSNGIKEL 63

Query: 70  VDRYDEGCIPPNYSDDMLAYIQNSDTNK----TCTRSLKATKLMKSPVYIYYQLDNFYQN 125
              Y      P   D  +   +           C+ S    +L   PVY+YY+L NFYQN
Sbjct: 64  EYDYTGN---PGTGDCSVCAAKGQGRAPPPGCACSWSFTLPELFPGPVYLYYELSNFYQN 120

Query: 126 HRRYVKSRNDKQL--WSKKHEDETKNCAP-EATSNGLSIVPCGLIAWSLFNDSYGFSIKN 182
           +RRY  SR+D QL   +         CAP +  S+GL I PCG IA SLFNDS+    + 
Sbjct: 121 NRRYGVSRDDAQLSGLASALRHPANECAPYQFRSDGLPIAPCGAIANSLFNDSFSLWHQR 180

Query: 183 K------MVKVSKKNIAWESDKKHKF-------GS-------DVYPKNFQNGVLIGGGKL 222
           +       V + +  IAW +D   KF       GS          P N+   V       
Sbjct: 181 QPSDPFVEVPLDRTAIAWWTDYHVKFRNPPLVNGSLALAFRGTAPPPNWHRPVYELSPDP 240

Query: 223 NSSIPLSKQEALIVWMRTAALPTFRKLYGRIE----SDIQANDSVTVIIENNYNTYSFGG 278
           N++  +++    +VWMRTAALPTFRKLY RI     S      +  V I  NY   +FGG
Sbjct: 241 NNTGFINQD--FVVWMRTAALPTFRKLYARIRQGNYSAGLPRGTYRVNITYNYPVRAFGG 298

Query: 279 KKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYV 320
            K ++LS  +W+GGKN FLGIAY+ VG LC+ +    ++VY+
Sbjct: 299 HKLIILSNISWMGGKNPFLGIAYLVVGSLCIVMGFVMLVVYI 340

Mus musculus (taxid: 10090)

>sp|P53740|YN8S_YEAST Uncharacterized protein YNR048W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YNR048W PE=1 SV=1

 Score =  181 bits (460), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 182/368 (49%), Gaps = 38/368 (10%)

Query: 2   KGRRSSSDSSSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLF 61
           K ++  S   ++ K++KP  + F QQ L A +PIL+P  V+ + I++  +F P+GI  + 
Sbjct: 8   KEKKQLSSKQNAQKSRKPANTSFRQQRLKAWQPILSPQSVLPLLILMACVFAPIGIGLVV 67

Query: 62  ASENVVEIVDRYDE----------GCIPPNYSD-----------DMLAYIQNSDTNKTCT 100
           ++ +V  +V  Y E            IP  Y D             +        N+TC 
Sbjct: 68  STISVQRLVVNYTECDALAPAKHFETIPSEYVDYHFSKKVAVQPQWMVLTDPELGNQTCR 127

Query: 101 RSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKK--HEDETKNCAPEATSNG 158
              +    +K   Y+YY+L NF QN+R YV+S +  QL  K     D   NC P  T   
Sbjct: 128 IQFEVPNHIKKSTYVYYRLTNFNQNYREYVQSLDLDQLKGKALIGNDLDPNCDPLRTVEN 187

Query: 159 LSIVPCGLIAWSLFNDSYGFSIK--NKMVK--VSKKNIAWESDKKHKFGSDVY------- 207
            +I PCGLIA S+FND++G ++   N      ++ K IAW++D  H++G   Y       
Sbjct: 188 KTIFPCGLIANSMFNDTFGTTLTGVNDTADYLLTTKGIAWDTDS-HRYGKTEYNASDIVP 246

Query: 208 PKNFQNGVLIGGGKLNSSIP-LSKQEALIVWMRTAALPTFRKLYGRIESDIQANDSVTVI 266
           P N+    L   G  + +IP L   E   +WMRTAALP F KL  + E++          
Sbjct: 247 PPNWAK--LFPNGYTDDNIPDLQNWEQFKIWMRTAALPNFYKLAMKNETNGLGKGIYIAD 304

Query: 267 IENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPL 326
           IE NY   SF G K  VL+T + IG  N+ LGI Y+ V G+    AI F++  +  PRP+
Sbjct: 305 IELNYPVRSFYGTKSFVLTTNSIIGAGNEALGIVYLIVAGIATLFAILFLIKVIFKPRPM 364

Query: 327 GDPAFLSW 334
            D ++L++
Sbjct: 365 HDHSYLNF 372

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q3MIR4|CC50B_HUMAN Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1

 Score =  178 bits (451), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/341 (34%), Positives = 171/341 (50%), Gaps = 34/341 (9%)

Query: 10  SSSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEI 69
           S+++    +P  + FTQQ L A +P+L+    + +F   G+ FI +G+   ++S  + E+
Sbjct: 4   SATARGAHQPDNTAFTQQRLPAWQPLLSASIALPLFFCAGLAFIGLGLGLYYSSNGIKEL 63

Query: 70  VDRYDEGCIPPNYSDDMLAYIQNSDTNK---TCTRSLKATKLMKSPVYIYYQLDNFYQNH 126
              YD    P   +  + A            +C       +L + PVY+YY+L NFYQN+
Sbjct: 64  --EYDYTGDPGTGNCSVCAAAGQGRALPPPCSCAWYFSLPELFQGPVYLYYELTNFYQNN 121

Query: 127 RRYVKSRNDKQL--WSKKHEDETKNCAP-EATSNGLSIVPCGLIAWSLFNDSYGFSIKNK 183
           RRY  SR+D QL             CAP + ++ GL I PCG IA SLFNDS+    + +
Sbjct: 122 RRYGVSRDDAQLSGLPSALRHPVNECAPYQRSAAGLPIAPCGAIANSLFNDSFSLWHQRQ 181

Query: 184 ------MVKVSKKNIAWESDKKHKF-------GS-------DVYPKNFQNGVLIGGGKLN 223
                  V + +  IAW +D   KF       GS          P N++  V       N
Sbjct: 182 PGGPYVEVPLDRSGIAWWTDYHVKFRNPPLVNGSLALAFQGTAPPPNWRRPVYELSPDPN 241

Query: 224 SSIPLSKQEALIVWMRTAALPTFRKLYGRIE----SDIQANDSVTVIIENNYNTYSFGGK 279
           ++  +++    +VWMRTAALPTFRKLY RI     S      +  V I  NY   +FGG 
Sbjct: 242 NTGFINQD--FVVWMRTAALPTFRKLYARIRQGNYSAGLPRGAYRVNITYNYPVRAFGGH 299

Query: 280 KKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYV 320
           K L+ S+ +W+GGKN FLGIAY+ VG LC+      ++VY+
Sbjct: 300 KLLIFSSISWMGGKNPFLGIAYLVVGSLCILTGFVMLVVYI 340

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
224134637	353	predicted protein [Populus trichocarpa]	0.988	0.960	0.711	1e-144
449445935	356	PREDICTED: ALA-interacting subunit 5-lik	0.935	0.901	0.745	1e-143
359497656	304	PREDICTED: ALA-interacting subunit 1, pa	0.883	0.996	0.753	1e-135
326490013	350	predicted protein [Hordeum vulgare subsp	0.965	0.945	0.665	1e-135
449501689	337	PREDICTED: ALA-interacting subunit 5-lik	0.886	0.902	0.747	1e-135
225462291	349	PREDICTED: ALA-interacting subunit 3 [Vi	0.947	0.931	0.674	1e-134
255550745	350	conserved hypothetical protein [Ricinus	0.950	0.931	0.662	1e-134
357123314	353	PREDICTED: ALA-interacting subunit 1-lik	0.967	0.940	0.657	1e-133
242093852	352	hypothetical protein SORBIDRAFT_10g02656	0.950	0.926	0.663	1e-132
242091191	342	hypothetical protein SORBIDRAFT_09g02642	0.970	0.973	0.647	1e-131

>gi|224134637|ref|XP_002327453.1| predicted protein [Populus trichocarpa] gi|222836007|gb|EEE74428.1| predicted protein [Populus trichocarpa]

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 242/340 (71%), Positives = 289/340 (85%), Gaps = 1/340 (0%)

Query: 3   GRRSSSDSSSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFA 62
           G+  S  + S+ K KKP YS+FTQQEL ACKPILTPG+VI  FI+VGV+FIP+G+ SL+A
Sbjct: 12  GKDDSPAAVSAKKNKKPNYSRFTQQELPACKPILTPGWVITSFIVVGVVFIPIGLASLYA 71

Query: 63  SENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNF 122
           SE+VVEIV+RYD+ CIPP+Y ++ L YIQ S+ NKTCT ++   K MKSPV+IYY+LDNF
Sbjct: 72  SEHVVEIVERYDKDCIPPDYRNNSLHYIQTSEINKTCTMTINVPKHMKSPVFIYYELDNF 131

Query: 123 YQNHRRYVKSRNDKQLWSKKHEDETKNCAPEA-TSNGLSIVPCGLIAWSLFNDSYGFSIK 181
           YQNHRRYVKSR+DKQL SK  E  T+ C PEA TSNG  IVPCGL+AWSLFND+Y FS+K
Sbjct: 132 YQNHRRYVKSRSDKQLRSKASEGVTETCKPEAVTSNGQPIVPCGLVAWSLFNDTYRFSVK 191

Query: 182 NKMVKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTA 241
            +++ VSKKNIAW+SD++HKFGSDVYPKNFQ+G LIGGGKL+SSIPLS+Q  LIVWMRTA
Sbjct: 192 KEVLDVSKKNIAWKSDQEHKFGSDVYPKNFQSGSLIGGGKLDSSIPLSEQVDLIVWMRTA 251

Query: 242 ALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAY 301
           ALP FRKLYG+IE D+QAN ++TV IENNYNTYSFGGKKKLVLSTT+WIGGKN FLG AY
Sbjct: 252 ALPNFRKLYGKIEKDLQANTTITVTIENNYNTYSFGGKKKLVLSTTSWIGGKNSFLGRAY 311

Query: 302 ITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNRHPAGH 341
           I +GGLCLFLA+ F+ VYV  PRPLGDP++LSWNR+P+G 
Sbjct: 312 IAIGGLCLFLAVCFVFVYVFKPRPLGDPSYLSWNRNPSGQ 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445935|ref|XP_004140727.1| PREDICTED: ALA-interacting subunit 5-like [Cucumis sativus]

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 240/322 (74%), Positives = 280/322 (86%), Gaps = 1/322 (0%)

Query: 21  YSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPP 80
           YS+FTQQEL ACKPILTPG+VI  F+ VG+IFIP+GI SLFASE VVEIVD+YD  C+P 
Sbjct: 33  YSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFASEQVVEIVDQYDHDCLPS 92

Query: 81  NYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWS 140
            +  + L +I++S TNKTC+R L   K MK PVY+YYQLDNFYQNHRRYVKSR+DKQL S
Sbjct: 93  QFRGNPLTFIKDSKTNKTCSRKLTVPKPMKGPVYVYYQLDNFYQNHRRYVKSRSDKQLRS 152

Query: 141 KKHEDETKNCAPEAT-SNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKK 199
           K  E  TK CAPEAT   G  IVPCGLIAWSLFND+YGFS+KNK ++VSKK+IAW+SD++
Sbjct: 153 KADEAHTKTCAPEATIGKGAPIVPCGLIAWSLFNDTYGFSMKNKALQVSKKDIAWKSDQE 212

Query: 200 HKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQA 259
            KFGSDVYPKNFQ+G LIGG KLN+SIPLS+QE LIVWMRTAALPTFRKLYG+IE+D +A
Sbjct: 213 RKFGSDVYPKNFQSGGLIGGAKLNASIPLSQQEDLIVWMRTAALPTFRKLYGKIEADFEA 272

Query: 260 NDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVY 319
           ND +TV+IENNYNTYSFGGKKKLVLSTT+WIGGKNDFLGIAY++VGGLCLFLAI+FIL+Y
Sbjct: 273 NDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLSVGGLCLFLAITFILLY 332

Query: 320 VVMPRPLGDPAFLSWNRHPAGH 341
           V+ PRPLGDP++LSWNR+ AG 
Sbjct: 333 VIKPRPLGDPSYLSWNRNAAGQ 354

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359497656|ref|XP_002263924.2| PREDICTED: ALA-interacting subunit 1, partial [Vitis vinifera]

 Score =  486 bits (1252), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 229/304 (75%), Positives = 267/304 (87%), Gaps = 1/304 (0%)

Query: 22  SKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPN 81
           S+FTQQEL ACKPILTPG+VI  FI VG+IFIP+G+ SLFASE VVEIV RYD  C+P +
Sbjct: 1   SRFTQQELPACKPILTPGWVISSFIFVGIIFIPIGLASLFASERVVEIVHRYDTDCVPAS 60

Query: 82  YSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSK 141
           Y +DMLAYIQ+++TNKTCTR+    K MKSPVYIYYQLDNFYQNHRRYVKSR+DKQL S+
Sbjct: 61  YRNDMLAYIQSNETNKTCTRTFLVPKQMKSPVYIYYQLDNFYQNHRRYVKSRSDKQLRSR 120

Query: 142 KHEDETKNCAPE-ATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKKH 200
             E++T +C PE  TSN  +IVPCGLIAWSLFND+YGFS+ N ++ VSKKNIAW+SD++H
Sbjct: 121 ASENDTSSCDPEDVTSNKSAIVPCGLIAWSLFNDTYGFSVNNTLLGVSKKNIAWKSDQQH 180

Query: 201 KFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQAN 260
           KFGSDVYPKNFQ+G LIGG KLNSSIPLS+Q  LIVWMRTAALPTFRKLYG+IE D++AN
Sbjct: 181 KFGSDVYPKNFQSGGLIGGAKLNSSIPLSQQVDLIVWMRTAALPTFRKLYGKIEVDLEAN 240

Query: 261 DSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYV 320
             +TV+IENNYNTYSFGGKKKLVLSTT+WIGGKNDFLGIAYIT+GGL LFLAISF+L+Y+
Sbjct: 241 TELTVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYITLGGLSLFLAISFLLIYI 300

Query: 321 VMPR 324
           + PR
Sbjct: 301 IKPR 304

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326490013|dbj|BAJ94080.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  486 bits (1251), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 221/332 (66%), Positives = 271/332 (81%), Gaps = 1/332 (0%)

Query: 11  SSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIV 70
           ++   T+ P+YSKFTQQEL ACKPILTP +V+ +F +VGVIF+PVG++SL A+++VVEI+
Sbjct: 19  AARRNTRMPKYSKFTQQELPACKPILTPKWVVSVFFLVGVIFVPVGVVSLLAAQDVVEII 78

Query: 71  DRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYV 130
           DRYD  C+PPN +D+ LAYIQN   +K CTR+L  TK MK P+Y+YYQLDNFYQNHRRYV
Sbjct: 79  DRYDHACVPPNMTDNKLAYIQNETISKECTRTLTVTKEMKQPIYVYYQLDNFYQNHRRYV 138

Query: 131 KSRNDKQLWSKKHEDETKNCAPEA-TSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSK 189
           KSRND QL   K  + T +C PE  T++G  IVPCGLIAWSLFND+Y FS     + V+K
Sbjct: 139 KSRNDAQLRDSKKSNTTTSCEPERFTADGKPIVPCGLIAWSLFNDTYSFSRGKDNLTVNK 198

Query: 190 KNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKL 249
           K+I+W+SD++HKF  +VYP NFQNG LIGG KLNSSIPLS+QE LIVWMRTAALPTFRKL
Sbjct: 199 KDISWKSDREHKFAKNVYPSNFQNGALIGGKKLNSSIPLSEQEDLIVWMRTAALPTFRKL 258

Query: 250 YGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCL 309
           YGRI  D++AND++TV + NNYNTYSFGGKKKLVLST TW+GGKNDFLG AY+ VGGLC+
Sbjct: 259 YGRIYVDLKANDTITVKLSNNYNTYSFGGKKKLVLSTATWLGGKNDFLGFAYLIVGGLCI 318

Query: 310 FLAISFILVYVVMPRPLGDPAFLSWNRHPAGH 341
           FLA +F L+Y++ PR LGD  +LSWNR+PAG 
Sbjct: 319 FLAFAFTLLYLIKPRKLGDHNYLSWNRNPAGR 350

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449501689|ref|XP_004161438.1| PREDICTED: ALA-interacting subunit 5-like isoform 1 [Cucumis sativus] gi|449501692|ref|XP_004161439.1| PREDICTED: ALA-interacting subunit 5-like isoform 2 [Cucumis sativus]

 Score =  486 bits (1250), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 228/305 (74%), Positives = 265/305 (86%), Gaps = 1/305 (0%)

Query: 21  YSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPP 80
           YS+FTQQEL ACKPILTPG+VI  F+ VG+IFIP+GI SLFASE VVEIVD+YD  C+P 
Sbjct: 33  YSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFASEQVVEIVDQYDHDCLPS 92

Query: 81  NYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWS 140
            +  + L +I++S TNKTC+R L   K MK PVY+YYQLDNFYQNHRRYVKSR+DKQL S
Sbjct: 93  QFRGNPLTFIKDSKTNKTCSRKLTVPKPMKGPVYVYYQLDNFYQNHRRYVKSRSDKQLRS 152

Query: 141 KKHEDETKNCAPEAT-SNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKK 199
           K  E  TK CAPEAT   G  IVPCGLIAWSLFND+YGFS+KNK ++VSKK+IAW+SD++
Sbjct: 153 KADEAHTKTCAPEATIGKGAPIVPCGLIAWSLFNDTYGFSMKNKALQVSKKDIAWKSDQE 212

Query: 200 HKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQA 259
            KFGSDVYPKNFQ+G LIGG KLN+SIPLS+QE LIVWMRTAALPTFRKLYG+IE+D +A
Sbjct: 213 RKFGSDVYPKNFQSGGLIGGAKLNASIPLSQQEDLIVWMRTAALPTFRKLYGKIEADFEA 272

Query: 260 NDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVY 319
           ND +TV+IENNYNTYSFGGKKKLVLSTT+WIGGKNDFLGIAY++VGGLCLFLAI+FIL+Y
Sbjct: 273 NDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLSVGGLCLFLAITFILLY 332

Query: 320 VVMPR 324
           V+ PR
Sbjct: 333 VIKPR 337

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225462291|ref|XP_002265244.1| PREDICTED: ALA-interacting subunit 3 [Vitis vinifera] gi|297736110|emb|CBI24148.3| unnamed protein product [Vitis vinifera]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 220/326 (67%), Positives = 270/326 (82%), Gaps = 1/326 (0%)

Query: 16  TKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDE 75
           +K+P+YS+FTQQEL ACKPILTP +VI  F++VG+IFIP+G+ +LFAS +VVEIVDRY+ 
Sbjct: 25  SKRPKYSRFTQQELPACKPILTPRWVISAFMLVGIIFIPIGVAALFASRDVVEIVDRYET 84

Query: 76  GCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRND 135
            CIP  + +D + YIQ    NK C R+L   K MK P+Y+YYQLDNFYQNHRRYVKSRND
Sbjct: 85  DCIPEEFRNDKVNYIQKPG-NKPCNRTLTVPKKMKQPIYVYYQLDNFYQNHRRYVKSRND 143

Query: 136 KQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWE 195
           +QL S    +ET +C PE  +NG  IVPCGLIAWSLFND+Y FS  N+ + ++KK I+W+
Sbjct: 144 EQLRSGNSANETSDCKPEDYANGAVIVPCGLIAWSLFNDTYNFSRNNEQLSLNKKGISWK 203

Query: 196 SDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIES 255
           SD++HKFG DVYPKNFQNG LIGG  LN SIPLS+QE LIVWMRTAALPTFRKLYG+IE 
Sbjct: 204 SDREHKFGKDVYPKNFQNGTLIGGATLNESIPLSEQEDLIVWMRTAALPTFRKLYGKIEV 263

Query: 256 DIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISF 315
           D+Q ND++ V +ENNYNTYSF GKKKLVLSTT+W+GGKNDFLGIAY+TVGG+C+FLA++F
Sbjct: 264 DLQINDTIQVSLENNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICIFLAMAF 323

Query: 316 ILVYVVMPRPLGDPAFLSWNRHPAGH 341
            +VY+V PR LGDP++LSWNR+P GH
Sbjct: 324 TVVYLVKPRRLGDPSYLSWNRNPGGH 349

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255550745|ref|XP_002516421.1| conserved hypothetical protein [Ricinus communis] gi|223544456|gb|EEF45976.1| conserved hypothetical protein [Ricinus communis]

 Score =  482 bits (1241), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 216/326 (66%), Positives = 270/326 (82%)

Query: 16  TKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDE 75
           +K+P+YS+FTQQEL ACKPILTP +VI  FI+V ++FIP+GI SL AS++VVEI+DRY+ 
Sbjct: 25  SKRPKYSRFTQQELPACKPILTPRWVISAFILVSIVFIPIGIASLTASQDVVEIIDRYET 84

Query: 76  GCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRND 135
            CIP     D + YIQ+ DT+K C R+++ TK MK P+Y+YYQLDNFYQNHRRYVKSR+D
Sbjct: 85  ECIPAQNRTDKVGYIQSPDTDKRCNRTIRVTKRMKQPIYVYYQLDNFYQNHRRYVKSRSD 144

Query: 136 KQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWE 195
           +QL S   E+ET NC PE T NG++IVPCGLIAWSLFND+Y FS+ +  ++V+KK+I+W+
Sbjct: 145 EQLRSLSSENETSNCKPEDTVNGIAIVPCGLIAWSLFNDTYSFSLNSMELQVNKKDISWK 204

Query: 196 SDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIES 255
           SD+ HKFG DV+PKNFQ G L GG  LN+S PLS+QE LIVWMRTAALPTFRKLYG+IE 
Sbjct: 205 SDRDHKFGKDVFPKNFQMGDLRGGATLNTSKPLSEQEDLIVWMRTAALPTFRKLYGKIEQ 264

Query: 256 DIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISF 315
           D+Q ND + + ++NNYNTYSF GKKKLVLSTTTW+GGKNDFLGIAY+TVGG+C FLA+SF
Sbjct: 265 DLQPNDELHITLQNNYNTYSFDGKKKLVLSTTTWLGGKNDFLGIAYLTVGGICFFLAMSF 324

Query: 316 ILVYVVMPRPLGDPAFLSWNRHPAGH 341
            +VY++ PR LGDP++LSWNR P G 
Sbjct: 325 TVVYLIKPRRLGDPSYLSWNRTPGGR 350

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357123314|ref|XP_003563356.1| PREDICTED: ALA-interacting subunit 1-like [Brachypodium distachyon]

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 219/333 (65%), Positives = 271/333 (81%), Gaps = 1/333 (0%)

Query: 10  SSSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEI 69
           +++   TK P+YSKFTQQEL ACKPILTP +V+ +F +VGVIF+PVG++SL A+ +VVEI
Sbjct: 21  AAARRNTKMPKYSKFTQQELPACKPILTPKWVVSVFFLVGVIFVPVGVVSLLAARDVVEI 80

Query: 70  VDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRY 129
           +DRYD+ C+P N +D+ L YIQN   +K CTR+L  TK MK P+++YYQLDNFYQNHRRY
Sbjct: 81  IDRYDDACVPVNMTDNKLGYIQNETISKECTRTLTVTKDMKQPIFVYYQLDNFYQNHRRY 140

Query: 130 VKSRNDKQLWSKKHEDETKNCAPE-ATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVS 188
           VKSRND QL   K  ++T +C PE  T++G  IVPCGLIAWSLFND+Y F+  N+ + V 
Sbjct: 141 VKSRNDAQLRDYKKANQTTSCEPERTTADGKPIVPCGLIAWSLFNDTYIFNRGNENLTVD 200

Query: 189 KKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRK 248
           KK+I+W+SD++HKF  +VYP NFQNG LIGG KL+SSIPLS QE LIVWMRTAALPTFRK
Sbjct: 201 KKDISWKSDREHKFAKNVYPSNFQNGGLIGGAKLDSSIPLSDQEDLIVWMRTAALPTFRK 260

Query: 249 LYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLC 308
           LYGRI  D++ ND++TV ++NNYNTYSFGGKKKLVLST TW+GGKNDFLG AY+ VGGLC
Sbjct: 261 LYGRIYVDLKENDTITVKLDNNYNTYSFGGKKKLVLSTATWLGGKNDFLGFAYLIVGGLC 320

Query: 309 LFLAISFILVYVVMPRPLGDPAFLSWNRHPAGH 341
           +FLA +F L+YV+ PR LGD  +LSWNRHPAG 
Sbjct: 321 IFLAFAFTLLYVIKPRKLGDHNYLSWNRHPAGR 353

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242093852|ref|XP_002437416.1| hypothetical protein SORBIDRAFT_10g026560 [Sorghum bicolor] gi|241915639|gb|EER88783.1| hypothetical protein SORBIDRAFT_10g026560 [Sorghum bicolor]

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 217/327 (66%), Positives = 261/327 (79%), Gaps = 1/327 (0%)

Query: 16  TKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDE 75
           T+ P+YSKFTQQEL ACKPILTP +V+ +F IVGVIF+P+G++SL A+ +VVEI+DRYDE
Sbjct: 26  TRMPKYSKFTQQELPACKPILTPKWVVSVFFIVGVIFVPIGVVSLIAARDVVEIIDRYDE 85

Query: 76  GCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRND 135
            C+P N +DD LAYIQN   +K C R+L  TK MK P+++YY+LDNFYQNHRRYVKSRND
Sbjct: 86  ACVPGNMTDDKLAYIQNETISKECIRNLTVTKDMKQPIFVYYELDNFYQNHRRYVKSRND 145

Query: 136 KQLWSKKHEDETKNCAPE-ATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAW 194
            QL      ++T  C PE  T+NG  IVPCGLIAWSLFND+Y F+   + + V KK+I+W
Sbjct: 146 AQLRDASKANQTSACEPEKTTANGQPIVPCGLIAWSLFNDTYNFTRGTENLTVDKKDISW 205

Query: 195 ESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIE 254
           +SD++HKFG DVYP NFQNG L GG  LN  IPLS+QE LIVWMRTAALPTFRKLYGRI 
Sbjct: 206 KSDREHKFGKDVYPSNFQNGALKGGATLNPKIPLSEQEDLIVWMRTAALPTFRKLYGRIH 265

Query: 255 SDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAIS 314
            D++ ND++TV + NNYNTYSFGGKKKLVLST TW+GGKNDFLG AY+ VGGLC+FLA +
Sbjct: 266 FDLKENDTITVRLNNNYNTYSFGGKKKLVLSTATWLGGKNDFLGFAYLIVGGLCIFLAFA 325

Query: 315 FILVYVVMPRPLGDPAFLSWNRHPAGH 341
           F L+Y V PR LGD  +LSWNRHPAG 
Sbjct: 326 FTLLYFVKPRKLGDHNYLSWNRHPAGR 352

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242091191|ref|XP_002441428.1| hypothetical protein SORBIDRAFT_09g026420 [Sorghum bicolor] gi|241946713|gb|EES19858.1| hypothetical protein SORBIDRAFT_09g026420 [Sorghum bicolor]

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 219/338 (64%), Positives = 270/338 (79%), Gaps = 5/338 (1%)

Query: 6   SSSDSSSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASEN 65
           S SDS +S ++KKP+YSKFTQQEL ACKP+LTPG VIG F ++GVIF+P+G+ SL AS+N
Sbjct: 6   SDSDSLASRRSKKPKYSKFTQQELPACKPLLTPGIVIGAFSLIGVIFVPIGLASLAASQN 65

Query: 66  VVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQN 125
           +VE++DRYD  C+  N   D + +IQ++ T+K CTR +   K MK P++IYYQL+NFYQN
Sbjct: 66  IVELIDRYDAECVSAN---DKVGFIQDTKTDKACTRKITVPKPMKGPIHIYYQLENFYQN 122

Query: 126 HRRYVKSRNDKQLWSKKHEDETKNCAPEATSN--GLSIVPCGLIAWSLFNDSYGFSIKNK 183
           HRRYVKSRNDKQL  K       NC PEA S   G  IVPCGLIAWSLFND+Y FS+  K
Sbjct: 123 HRRYVKSRNDKQLLYKDAASTITNCEPEAISEDGGKPIVPCGLIAWSLFNDTYSFSLNKK 182

Query: 184 MVKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAAL 243
            V+V+KKNIAW+SDK  KFGSDV+P NFQ G LIGG KLN  IPLS+QE LIVWMRTAAL
Sbjct: 183 AVEVNKKNIAWDSDKNKKFGSDVFPSNFQKGGLIGGAKLNEKIPLSEQEDLIVWMRTAAL 242

Query: 244 PTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYIT 303
           PTFRKLYGRIESD+ A+D +TV+I+NNYNTYSFGG K LVLSTT+WIGG+N+F+G+AY+ 
Sbjct: 243 PTFRKLYGRIESDMMASDEITVVIQNNYNTYSFGGTKALVLSTTSWIGGRNNFIGVAYVA 302

Query: 304 VGGLCLFLAISFILVYVVMPRPLGDPAFLSWNRHPAGH 341
           +GG+CLFLA+ F+++YV+ PR LGDP +LSWN+    H
Sbjct: 303 IGGICLFLAMGFVILYVIKPRALGDPNYLSWNKENPDH 340

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	343
TAIR|locus:2206400	350	ALIS5 "ALA-interacting subunit	0.950	0.931	0.611	6.1e-110
TAIR|locus:2020018	349	AT1G54320 [Arabidopsis thalian	0.944	0.928	0.618	5.5e-109
TAIR|locus:2087695	350	ALIS1 "ALA-interacting subunit	0.944	0.925	0.612	7.2e-107
TAIR|locus:2032780	336	AT1G16360 [Arabidopsis thalian	0.927	0.946	0.608	1.2e-106
TAIR|locus:2161453	343	AT5G46150 "AT5G46150" [Arabido	0.927	0.927	0.537	5.7e-91
DICTYBASE|DDB_G0276567	312	DDB_G0276567 "CDC50/LEM3 famil	0.860	0.945	0.413	1.3e-52
UNIPROTKB|F1NX30	372	TMEM30A "Cell cycle control pr	0.545	0.502	0.360	9.8e-48
UNIPROTKB|Q5F362	372	TMEM30A "Cell cycle control pr	0.545	0.502	0.360	9.8e-48
UNIPROTKB|G4MVD8	437	MGG_12405 "Cell division contr	0.437	0.343	0.409	8.1e-47
ZFIN|ZDB-GENE-030131-5884	369	tmem30ab "transmembrane protei	0.545	0.506	0.352	1.1e-44

TAIR|locus:2206400 ALIS5 "ALA-interacting subunit 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 1086 (387.4 bits), Expect = 6.1e-110, P = 6.1e-110
 Identities = 200/327 (61%), Positives = 251/327 (76%)

Query:    16 TKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDE 75
             +K+P+YS+FTQQEL ACKPILT                      LFAS+ VVEIVDRYD 
Sbjct:    25 SKRPKYSRFTQQELPACKPILTPRWVILTFLVAGVVFIPLGVICLFASQGVVEIVDRYDT 84

Query:    76 GCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRND 135
              CIP +  ++M+AYIQ  + +K C R++  TK MK PVY+YYQL+NFYQNHRRYVKSRND
Sbjct:    85 DCIPTSSRNNMVAYIQG-EGDKICKRTITVTKAMKHPVYVYYQLENFYQNHRRYVKSRND 143

Query:   136 KQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWE 195
              QL S K E + K CAPE    G  IVPCGL+AWSLFND+Y FS  ++ + V+KK I+W+
Sbjct:   144 AQLRSPKEEHDVKTCAPEDNVGGEPIVPCGLVAWSLFNDTYSFSRNSQQLLVNKKGISWK 203

Query:   196 SDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIES 255
             SD+++KFG +V+PKNFQ G  IGGG LN S PLS+QE LIVWMRTAALPTFRKLYG+IE+
Sbjct:   204 SDRENKFGKNVFPKNFQKGAPIGGGTLNISKPLSEQEDLIVWMRTAALPTFRKLYGKIET 263

Query:   256 DIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISF 315
             D+ A D++TV+++NNYNTYSF G+KKLVLSTT+W+GG+NDFLGIAY+TVG +CLFLA++F
Sbjct:   264 DLHAGDTITVLLQNNYNTYSFNGQKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVTF 323

Query:   316 ILVYVVMPRPLGDPAFLSWNRHPAGHQ 342
              ++Y+V PR LGDP++LSWNR   G Q
Sbjct:   324 AVLYLVKPRQLGDPSYLSWNRSAGGLQ 350

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009543 "chloroplast thylakoid lumen" evidence=ISS

GO:0005886 "plasma membrane" evidence=IDA

GO:0006865 "amino acid transport" evidence=RCA

TAIR|locus:2020018 AT1G54320 [Arabidopsis thaliana (taxid:3702)]

 Score = 1077 (384.2 bits), Expect = 5.5e-109, P = 5.5e-109
 Identities = 201/325 (61%), Positives = 244/325 (75%)

Query:    16 TKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDE 75
             +K+P+YSKFTQQEL ACKPILT                     SLFAS++VVEIVDRYD 
Sbjct:    25 SKRPKYSKFTQQELPACKPILTPGWVISTFLIVSVIFIPLGVISLFASQDVVEIVDRYDT 84

Query:    76 GCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRND 135
              CIP     + +AYIQ  D +K C R LK TK MK P+Y+YYQL+NFYQNHRRYVKSR+D
Sbjct:    85 ECIPAPARTNKVAYIQG-DGDKVCNRDLKVTKRMKQPIYVYYQLENFYQNHRRYVKSRSD 143

Query:   136 KQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWE 195
              QL S K+E++   C PE    G  IVPCGLIAWSLFND+Y  S  N  + V+KK IAW+
Sbjct:   144 SQLRSTKYENQISACKPEDDVGGQPIVPCGLIAWSLFNDTYALSRNNVSLAVNKKGIAWK 203

Query:   196 SDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIES 255
             SDK+HKFG+ V+PKNFQ G + GG  L+  IPLS+QE LIVWMRTAALPTFRKLYG+IES
Sbjct:   204 SDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLSEQEDLIVWMRTAALPTFRKLYGKIES 263

Query:   256 DIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISF 315
             D++  D++ V + NNYNTYSF GKKKLVLSTT+W+GGKNDFLGIAY+TVGG+C  LA++F
Sbjct:   264 DLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFILALAF 323

Query:   316 ILVYVVMPRPLGDPAFLSWNRHPAG 340
              ++Y+V PR LGDP++LSWNR+P G
Sbjct:   324 TIMYLVKPRRLGDPSYLSWNRNPGG 348

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

TAIR|locus:2087695 ALIS1 "ALA-interacting subunit 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
 Identities = 199/325 (61%), Positives = 244/325 (75%)

Query:    16 TKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDE 75
             +K+P+YSKFTQQEL ACKPILT                     SLFAS++VVEIVDRYD 
Sbjct:    26 SKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPLGVISLFASQDVVEIVDRYDS 85

Query:    76 GCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRND 135
              CIP +   + +AYIQ +  NK+CTR+L   K MK P+Y+YYQL+NFYQNHRRYVKSR+D
Sbjct:    86 ACIPLSDRANKVAYIQGTG-NKSCTRTLIVPKRMKQPIYVYYQLENFYQNHRRYVKSRSD 144

Query:   136 KQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWE 195
              QL S K E++   C PE    G  IVPCGLIAWSLFND+Y  S  N+ + V+KK IAW+
Sbjct:   145 SQLRSVKDENQIDACKPEDDFGGQPIVPCGLIAWSLFNDTYVLSRNNQGLTVNKKGIAWK 204

Query:   196 SDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIES 255
             SDK+HKFG +V+PKNFQ G L GG  L+ + PLS QE LIVWMRTAALPTFRKLYG+IES
Sbjct:   205 SDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDLIVWMRTAALPTFRKLYGKIES 264

Query:   256 DIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISF 315
             D++  +++ V ++NNYNTYSF GKKKLVLSTT+W+GGKNDFLGIAY+TVGG+C  LA++F
Sbjct:   265 DLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKNDFLGIAYLTVGGICFVLALAF 324

Query:   316 ILVYVVMPRPLGDPAFLSWNRHPAG 340
              ++Y+V PR LGDP +LSWNR P G
Sbjct:   325 TVMYLVKPRRLGDPTYLSWNRIPGG 349

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016020 "membrane" evidence=ISS

GO:0015914 "phospholipid transport" evidence=IDA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0035556 "intracellular signal transduction" evidence=RCA

TAIR|locus:2032780 AT1G16360 [Arabidopsis thaliana (taxid:3702)]

 Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
 Identities = 194/319 (60%), Positives = 244/319 (76%)

Query:    22 SKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDEGCIPPN 81
             S+FTQQEL ACKPILT                      LFAS+ V+EIVDRYD  CIP +
Sbjct:    17 SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLS 76

Query:    82 YSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSK 141
               D+ + YIQ  + +K C R++  TK MK+PVY+YYQL+N+YQNHRRYVKSR D QL S 
Sbjct:    77 SRDNKVRYIQGLE-DKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSP 135

Query:   142 KHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAWESDKKHK 201
             K E ETK+CAPE T  G  IVPCGL+AWSLFND+Y F+  N+ + V+KK+I+W+SD++ K
Sbjct:   136 KDEHETKSCAPEDTLGGQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRESK 195

Query:   202 FGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIESDIQAND 261
             FG +V+PKNFQ G LIGG  L+  IPLS+QE LIVWMRTAALPTFRKLYG+I++D+QA D
Sbjct:   196 FGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAGD 255

Query:   262 SVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVV 321
             ++ V+++NNYNTYSF GKKKLVLSTT+W+GG+NDFLGIAY+TVG +CLFLA+SF ++Y+ 
Sbjct:   256 TIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYLA 315

Query:   322 MPRPLGDPAFLSWNRHPAG 340
              PR LGDP++LSWNR   G
Sbjct:   316 KPRQLGDPSYLSWNRSAGG 334

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2161453 AT5G46150 "AT5G46150" [Arabidopsis thaliana (taxid:3702)]

 Score = 907 (324.3 bits), Expect = 5.7e-91, P = 5.7e-91
 Identities = 173/322 (53%), Positives = 220/322 (68%)

Query:    15 KTKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYD 74
             +  K  Y +F QQ+L ACKP+LT                     +L AS + +EI+DRYD
Sbjct:    21 RRSKALY-QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLITLRASRDAIEIIDRYD 79

Query:    75 EGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRN 134
               CIP  Y  + L YI +S   K CTR LK  K MK+P++IYYQLDN+YQNHRRYVKSR+
Sbjct:    80 VECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQLDNYYQNHRRYVKSRS 139

Query:   135 DKQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKMVKVSKKNIAW 194
             D+QL        T +C PE +SNGL IVPCGLIAWS+FND++ FS +   + VS+ NIAW
Sbjct:   140 DQQLLHGLEYSHTSSCEPEESSNGLPIVPCGLIAWSMFNDTFTFSRERTKLNVSRNNIAW 199

Query:   195 ESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFRKLYGRIE 254
             +SD++HKFG +VYP NFQNG LIGG KL+  IPLS QE  IVWMR AAL +FRKLYGRIE
Sbjct:   200 KSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWMRAAALLSFRKLYGRIE 259

Query:   255 SDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAIS 314
              D++    V V + NNYNTYSF G+KKL+LST+ W+GG+NDFLGI Y+ VG   + ++I 
Sbjct:   260 EDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLGITYLVVGSSSIVISII 319

Query:   315 FILVYVVMPRPLGDPAFLSWNR 336
             F+L+++  PRP GD    SWN+
Sbjct:   320 FMLLHLKNPRPYGDN---SWNK 338

GO:0003674 "molecular_function" evidence=ND

GO:0005794 "Golgi apparatus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA;ISS

DICTYBASE|DDB_G0276567 DDB_G0276567 "CDC50/LEM3 family protein" [Dictyostelium discoideum (taxid:44689)]

 Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
 Identities = 137/331 (41%), Positives = 182/331 (54%)

Query:    16 TKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYDE 75
             +K+P  + F QQ L A +PILT                      + +S  V+E V RYD+
Sbjct:     8 SKRPANTAFKQQRLKAWEPILTPGPVIIAFIVIGIVFIPIGAAIINSSNKVLEHVIRYDD 67

Query:    76 GCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRND 135
                 PN               + CT +      M+SPVY+YY+LDNFYQNHRRYVKSRND
Sbjct:    68 N---PN-----------CQLGQKCTINYTLPTEMESPVYLYYKLDNFYQNHRRYVKSRND 113

Query:   136 KQLWSKKHED--ETKNCAPEATSNGLS-----IVPCGLIAWSLFNDSYGFS-IKNKMVKV 187
              QL   +  D  + K+C P  T++G       +VPCGLIA S+FNDS   +     ++ +
Sbjct:   114 DQLRGIEVTDFSKLKDCEPLITTDGSEDVNKILVPCGLIANSVFNDSISLADASGNLINL 173

Query:   188 SKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEALIVWMRTAALPTFR 247
             +KK IAW+SD   KF +  YP   +NGV    G +N S    + E  IVWMRTAALP F+
Sbjct:   174 TKKGIAWQSDIDKKFKN--YP---ENGV----GVINFSN--FEDEDFIVWMRTAALPDFK 222

Query:   248 KLYGRIESDIQA--NDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVG 305
             KLY RI        + ++ + I+N Y   SF GKK +VLSTT+WIGGKN FLG AYI VG
Sbjct:   223 KLY-RIYHGQNGPLSGTIQIRIDNKYPVASFDGKKYVVLSTTSWIGGKNPFLGYAYIIVG 281

Query:   306 GLCLFLAISFILVYVVMPRPLGDPAFLSWNR 336
              +C    + F + + + PR LG P +L WN+
Sbjct:   282 IICFVQGVVFAIKHKISPRVLGSPKYLEWNK 312

GO:0016020 "membrane" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

UNIPROTKB|F1NX30 TMEM30A "Cell cycle control protein 50A" [Gallus gallus (taxid:9031)]

 Score = 260 (96.6 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
 Identities = 70/194 (36%), Positives = 92/194 (47%)

Query:    15 KTKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYD 74
             KT+KP  + F QQ L A +PILT                         S N+ E    Y 
Sbjct:    33 KTRKPDNTAFKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIREYEIDYT 92

Query:    75 EGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRN 134
              G  P +  +  L    +S    TCT +       +S V++YY L NFYQNHRRYVKSR+
Sbjct:    93 -GVEPSSPCNKCLNVSWDSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVKSRD 151

Query:   135 DKQLWSKKHE--DETKNCAPEATSNGLSIVPCGLIAWSLFNDSYG-FSIKNKM---VKVS 188
             D QL        + +K C P  T+    I PCG IA S+FND+   + I+N     + + 
Sbjct:   152 DSQLNGDNSSLLNPSKECEPYRTNEDKPIAPCGAIANSMFNDTLELYHIENDTRTAITLI 211

Query:   189 KKNIAWESDKKHKF 202
             KK IAW +DK  KF
Sbjct:   212 KKGIAWWTDKNVKF 225

GO:0016020 "membrane" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0036010 "protein localization to endosome" evidence=IEA

GO:0070863 "positive regulation of protein exit from endoplasmic reticulum" evidence=IEA

UNIPROTKB|Q5F362 TMEM30A "Cell cycle control protein 50A" [Gallus gallus (taxid:9031)]

 Score = 260 (96.6 bits), Expect = 9.8e-48, Sum P(2) = 9.8e-48
 Identities = 70/194 (36%), Positives = 92/194 (47%)

Query:    15 KTKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEIVDRYD 74
             KT+KP  + F QQ L A +PILT                         S N+ E    Y 
Sbjct:    33 KTRKPDNTAFKQQRLPAWQPILTAGTVLPAFFIIGLIFIPIGIGIFVTSNNIREYEIDYT 92

Query:    75 EGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRN 134
              G  P +  +  L    +S    TCT +       +S V++YY L NFYQNHRRYVKSR+
Sbjct:    93 -GVEPSSPCNKCLNVSWDSTPPCTCTINFTLEHSFESNVFMYYGLSNFYQNHRRYVKSRD 151

Query:   135 DKQLWSKKHE--DETKNCAPEATSNGLSIVPCGLIAWSLFNDSYG-FSIKNKM---VKVS 188
             D QL        + +K C P  T+    I PCG IA S+FND+   + I+N     + + 
Sbjct:   152 DSQLNGDNSSLLNPSKECEPYRTNEDKPIAPCGAIANSMFNDTLELYHIENDTRTAITLI 211

Query:   189 KKNIAWESDKKHKF 202
             KK IAW +DK  KF
Sbjct:   212 KKGIAWWTDKNVKF 225

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G4MVD8 MGG_12405 "Cell division control protein 50" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 286 (105.7 bits), Expect = 8.1e-47, Sum P(3) = 8.1e-47
 Identities = 66/161 (40%), Positives = 91/161 (56%)

Query:   188 SKKNIAWESDKK--HKFGSD------VYPKNFQNGVLIGGGKLNSSIP-LSKQEALIVWM 238
             +  NIAW SD     KF SD      V P N++     G      ++P L   +A  VWM
Sbjct:   253 NNSNIAWPSDADLYGKFPSDMNIDDVVPPPNWRKQY--GDKYTKETVPDLKTWQAFQVWM 310

Query:   239 RTAALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLG 298
             RTA LP F KLY R ++      +  V IE+++   ++ G K L+++T T IGG+N FLG
Sbjct:   311 RTAGLPNFSKLYRRNDTAPMREGTYQVEIESHWPADAYRGTKSLLITTRTIIGGRNPFLG 370

Query:   299 IAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNRHPA 339
             IAYI VGG+C+ L + F   +++ PR LGD  +LSWN  PA
Sbjct:   371 IAYIVVGGICIILGVIFTATHLIKPRKLGDHTYLSWNNAPA 411

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-030131-5884 tmem30ab "transmembrane protein 30Ab" [Danio rerio (taxid:7955)]

 Score = 256 (95.2 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
 Identities = 69/196 (35%), Positives = 93/196 (47%)

Query:    15 KTKKPQYSKFTQQELSACKPILTXXXXXXXXXXXXXXXXXXXXXSLFASENVVEI-VDRY 73
             +T+KP  + F QQ L A +PILT                         S N+ E  +D  
Sbjct:    27 RTRKPDNTAFKQQRLPAWQPILTAGTVLPAFFVIGLIFIPIGIGLYVTSNNIKEFEIDYT 86

Query:    74 DEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSR 133
                   P ++    ++  NS T   CT S    +  +S V++YY L NFYQNHRRYVKSR
Sbjct:    87 GTDMSSPCFNCSQ-SFSWNSTTPCKCTLSFSLDQPFESNVFMYYGLSNFYQNHRRYVKSR 145

Query:   134 NDKQLWSKKH--EDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYG-FSIKNKMVKVS-- 188
             +D QL   +   ++ +K C P   ++   I PCG IA S+FND+   F I     K    
Sbjct:   146 DDSQLNGDERSLKEPSKECEPYRINDNKRIAPCGAIANSMFNDTLDLFYIDPNGTKTQIP 205

Query:   189 --KKNIAWESDKKHKF 202
               KK IAW +DK  KF
Sbjct:   206 MIKKGIAWWTDKHVKF 221

GO:0016020 "membrane" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P53740	YN8S_YEAST	No assigned EC number	0.3288	0.9620	0.8396	yes	no
Q8L8W0	ALIS5_ARATH	No assigned EC number	0.6452	0.9504	0.9314	yes	no
Q8BHG3	CC50B_MOUSE	No assigned EC number	0.3479	0.8921	0.8668	yes	no
Q1MTQ5	MUG89_SCHPO	No assigned EC number	0.3716	0.9533	0.8257	yes	no
Q3MIR4	CC50B_HUMAN	No assigned EC number	0.3431	0.8950	0.8746	yes	no
Q5F362	CC50A_CHICK	No assigned EC number	0.4121	0.8775	0.8091	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00023466001 SubName- Full=Chromosome undetermined scaffold_30, whole genome shotgun sequence; (342 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	343
pfam03381	275	pfam03381, CDC50, LEM3 (ligand-effect modulator 3)	1e-110
COG5035	372	COG5035, CDC50, Cell cycle control protein [Cell d	7e-78

>gnl|CDD|217523 pfam03381, CDC50, LEM3 (ligand-effect modulator 3) family / CDC50 family

 Score =  321 bits (824), Expect = e-110
 Identities = 133/284 (46%), Positives = 165/284 (58%), Gaps = 25/284 (8%)

Query: 60  LFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQL 119
           L AS NV EI  RYD+ C       +       ++   TCT +    + MK PVY YYQL
Sbjct: 2   LVASNNVQEIEIRYDDCCTAAPEIGES-----FAEIPSTCTITFTIPEDMKGPVYFYYQL 56

Query: 120 DNFYQNHRRYVKSRNDKQLWSKKHEDETKNCAPEAT--SNGLSIVPCGLIAWSLFNDSYG 177
            NFYQNHRRYVKSR+D QL  K    +  NC P  +   NG  I PCGLIA S+FND++ 
Sbjct: 57  TNFYQNHRRYVKSRSDDQLRGKAVSGDDNNCEPLRSNDYNGKPIAPCGLIANSMFNDTFS 116

Query: 178 FSIKN---KMVKVSKKNIAWESDKKHKFG-------SDVYPKNFQNGVLIGGGKLNSSIP 227
             + N     V + KK IAW SDK+ KF          V P N++        + + +IP
Sbjct: 117 LPLANNGTTNVTLDKKGIAWSSDKEKKFKNTKYNPSGTVPPPNWK-----PNYEDDHTIP 171

Query: 228 -LSKQEALIVWMRTAALPTFRKLYGRIES-DIQANDSVTVIIENNYNTYSFGGKKKLVLS 285
                E  IVWMRTAALPTFRKLY RI++ D+ A    T+ IENNY   SF GKK +VLS
Sbjct: 172 DNQTNEDFIVWMRTAALPTFRKLYRRIDATDLPAGT-YTIQIENNYPVSSFNGKKSIVLS 230

Query: 286 TTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDP 329
           TT+W GGKN FLGIAY+ VGG+C  L I F++ ++  PR LGD 
Sbjct: 231 TTSWFGGKNPFLGIAYLVVGGICFLLGILFLIRHLFKPRKLGDH 274

Members of this family have been predicted to contain transmembrane helices. The family member LEM3 is a ligand-effect modulator, mutation of which increases glucocorticoid receptor activity in response to dexamethasone and also confers increased activity on other intracellular receptors including the progesterone, oestrogen and mineralocorticoid receptors. LEM3 is thought to affect a downstream step in the glucocorticoid receptor pathway. Factors that modulate ligand responsiveness are likely to contribute to the context-specific actions of the glucocorticoid receptor in mammalian cells. The products of genes YNR048w, YNL323w and YCR094w (CDC50) show redundancy of function and are involved in regulation of transcription via CDC39. CDC39 (also known as NOT1) is normally a negative regulator of transcription either by affecting the general RNA polymerase II machinery or by altering chromatin structure. One function of CDC39 is to block activation of the mating response pathway in the absence of pheromone, and mutation causes arrest in G1 by activation of the pathway. It may be that the cold-sensitive arrest in G1 noticed in CDC50 mutants may be due to inactivation of CDC39. The effects of LEM3 on glucocorticoid receptor activity may also be due to effects on transcription via CDC39. Length = 275

>gnl|CDD|227368 COG5035, CDC50, Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]

 Score =  242 bits (620), Expect = 7e-78
 Identities = 126/360 (35%), Positives = 185/360 (51%), Gaps = 45/360 (12%)

Query: 15  KTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRY- 73
           K+++P  + F QQ L A +PIL+P  V+ +  ++G++F P+G   L AS +V E+   Y 
Sbjct: 19  KSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLLVASSSVQELTIDYT 78

Query: 74  -DEGCIPPNYSDDMLAYIQ------------------NSDTNKTCTRSLKATKLMKSPVY 114
                    +SD    YIQ                    D  + C         MK PV+
Sbjct: 79  DCMTLASDEFSDIPSEYIQFHFKKKVNVLPQWRFSTDEEDDFQKCQIRFTVPSDMKKPVF 138

Query: 115 IYYQLDNFYQNHRRYVKSRNDKQLWSK--KHEDETKNCAPEATSNGLSIVPCGLIAWSLF 172
           IYY+L NFYQNHRRYVKS ++ QL  +  K +D   NC P + +    I PCGLIA S+F
Sbjct: 139 IYYRLTNFYQNHRRYVKSFDEDQLRGEALKSDDLKSNCKPLSYNEDKIIYPCGLIANSMF 198

Query: 173 NDSYGFSI----KNKMVKVSKKNIAWESDKKHKFG------SDV-----YPKNFQNGVLI 217
           ND++   +          ++ K IAWESD+ H++       SD+     + K + +G   
Sbjct: 199 NDTFSSLLTGIEDTSNYNLTTKGIAWESDR-HRYKKTKYNASDIVPPPNWAKMYPDGYT- 256

Query: 218 GGGKLNSSIP-LSKQEALIVWMRTAALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSF 276
                + +IP LS  E    WMRTAA P F KL  R  +D+    +  + I  N+    F
Sbjct: 257 -----DDNIPDLSTWEEFQNWMRTAAFPKFSKLAMRNVNDVLPPGTYQLNITLNFPVLEF 311

Query: 277 GGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNR 336
            G K +VL+T + IGGKN FLGI Y+ VGG+C  L + F++ ++  PR + D ++L+WN 
Sbjct: 312 NGTKSIVLTTNSVIGGKNYFLGIVYLIVGGICALLGLIFLIKWLFKPRKMADHSYLNWNM 371

Length = 372

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	343
KOG2952	351	consensus Cell cycle control protein [Cell cycle c	100.0
COG5035	372	CDC50 Cell cycle control protein [Cell division an	100.0
PF03381	278	CDC50: LEM3 (ligand-effect modulator 3) family / C	100.0

>KOG2952 consensus Cell cycle control protein [Cell cycle control, cell division, chromosome partitioning; Transcription; Signal transduction mechanisms]

Probab=100.00  E-value=5.7e-110  Score=791.15  Aligned_cols=324  Identities=52%  Similarity=0.958  Sum_probs=297.5

Q ss_pred             CCCCcCCCCCCCCccccccccCcccccchhHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEEcCCCCCCCCCCCCcccee
Q 046680           10 SSSSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPNYSDDMLAY   89 (343)
Q Consensus        10 ~~~~~~s~~p~~~~f~QQ~L~aw~p~~tp~~vi~~f~~igiifi~iGi~l~~~s~~~~E~~i~Y~~~c~~~~~~~~~~~~   89 (343)
                      ++..+++|||++++|+|||||||||++||.+|+++|+++|++|++||+++++++++|.|++++|++ |.+.+....+.++
T Consensus        14 ~~~~~~s~rP~~t~f~QQrLpA~qPilt~~~vlp~f~i~g~vFipiGv~l~~as~~v~Ei~i~YTd-c~~~~~~~~~~~~   92 (351)
T KOG2952|consen   14 KGNRKKSRRPKNTAFKQQRLPAWQPILTPRTVLPLFFIIGVVFLPIGVGLLFASSKVIEITIRYTD-CIPTGFRTNPSEY   92 (351)
T ss_pred             cchhhhccCCccccchhccccccccccCcchHHHHHHHHHHHHHhhhhheeEeecceEEEEEeccc-Cccccccccchhh
Confidence            346778999999999999999999999999999999999999999999999999999999999976 8775545555565


Q ss_pred             eecC-CCCceeEEEEEecCCCCCceEEEEEecchhhhhhhhhcCCCccccCCCCCCC-CCCCCCcccccCC-ceeeechh
Q 046680           90 IQNS-DTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHED-ETKNCAPEATSNG-LSIVPCGL  166 (343)
Q Consensus        90 ~~~~-~~~~~C~i~f~i~~~m~~pVyvYY~L~nFyQNHR~y~~Srs~~QL~G~~~~~-~~~~C~P~~~~~g-~~i~PCGl  166 (343)
                      ++.. .+.+.|+++|+|+++|++|||+||+|+|||||||||++|||++||+|+.... ..+.|.|+++.++ ++|+||||
T Consensus        93 ~~~~~~~~~~C~~~f~vp~~~k~pVy~YY~L~nfyQNhRRYvkSr~d~QL~G~~~~~~~~~~C~Pl~~~~~~kpi~PCGl  172 (351)
T KOG2952|consen   93 IQGHFDQTKSCTITFTVPKDMKGPVYLYYELTNFYQNHRRYVKSRDDKQLRGEPSKELNVKSCAPLEYNEGGKPIYPCGL  172 (351)
T ss_pred             hhcccCcccceEEEEEccccCCCCEEEEEehhHHHHHHHHHHhcccHHHhcCCCccccCccCCCcceecCCCceeeecch
Confidence            5432 2346799999999999999999999999999999999999999999997753 2366999999766 99999999


Q ss_pred             hhhccccceeeccccCe---eeeeeccccCCccccccccCCCCC-------CCCCCCCcccCCcccCCCCCCcchhhHHH
Q 046680          167 IAWSLFNDSYGFSIKNK---MVKVSKKNIAWESDKKHKFGSDVY-------PKNFQNGVLIGGGKLNSSIPLSKQEALIV  236 (343)
Q Consensus       167 iA~S~FNDtF~l~~~~~---~i~~~~~gIaw~sD~~~kF~~~~~-------p~~~~~~~~~~~~~~~~~~~~~~ne~Fiv  236 (343)
                      ||||||||||++...+.   .++++++||||++|+ +||+++.+       |+||+++.+.+| .+|+++|+.+||+|||
T Consensus       173 IAnSlFNDTf~~~~~~~~~~~~~l~~kgIaW~sDk-~kf~~p~~n~~~~~pPpnW~k~~~~gg-~~d~n~pl~~nedfiv  250 (351)
T KOG2952|consen  173 IANSLFNDTFELSLTNDGDSDYPLTTKGIAWESDK-HKFRKPIYNASGIVPPPNWQKGYPEGG-YTDDNIPLSENEDFIV  250 (351)
T ss_pred             hcchhcccccchhcccCCCccceeccCCccchhhh-hhhcCCCCccccccCCccccccCCcCC-cCCCCCCchhhHHHHH
Confidence            99999999999976533   789999999999999 89999766       999999999888 8889999899999999


Q ss_pred             HHhcCCCCchhhhhhccccc-CCCCceEEEEEEeeecccccCceEEEEEEeccccCccCcchhHHHHHHHHHHHHHHHHH
Q 046680          237 WMRTAALPTFRKLYGRIESD-IQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISF  315 (343)
Q Consensus       237 WMr~Aalp~FrKLYg~i~~~-l~~g~~y~v~I~n~ypv~~F~G~K~ivlst~s~~GgkN~~Lgi~ylvvG~i~~i~~i~f  315 (343)
                      |||+||||+||||||+|+++ |++| +|+++|++||||++|+|+|.+||+|+||+||||+||||+|||||++|+++|++|
T Consensus       251 WMRtAAlPtFrKLy~~i~~~gL~~G-~y~l~i~~Nypv~sf~G~K~~vlst~SwlGgkN~FLgI~YLvVG~ic~~l~~~f  329 (351)
T KOG2952|consen  251 WMRTAALPTFRKLYRIIESNGLPKG-TYQLNITNNYPVRSFNGKKKFVLSTTSWLGGKNPFLGIAYLVVGSICILLGLIF  329 (351)
T ss_pred             HHHhcccchHHHHHhhhccCCCCCc-eEEEEEecccceeecCCceEEEEeeccccccCCccceehHHHHHHHHHHHHHHH
Confidence            99999999999999999987 9999 699999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCCCccccccCCC
Q 046680          316 ILVYVVMPRPLGDPAFLSWNRH  337 (343)
Q Consensus       316 ~~~~~~~~r~~gd~~~L~w~~~  337 (343)
                      +++|+++||++||+++|+|+++
T Consensus       330 ~~~~l~~~r~~~d~~~l~~~~~  351 (351)
T KOG2952|consen  330 LVIYLFKPRRLGDPSYLSWNRS  351 (351)
T ss_pred             HHHHhhcccccCCccccccccC
Confidence            9999999999999999999974

>COG5035 CDC50 Cell cycle control protein [Cell division and chromosome partitioning / Transcription / Signal transduction mechanisms]

Probab=100.00  E-value=6.8e-97  Score=688.24  Aligned_cols=321  Identities=37%  Similarity=0.679  Sum_probs=284.3

Q ss_pred             CCcCCCCCCCCccccccccCcccccchhHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEEcCCCCCCCCCC-------C-
Q 046680           12 SSSKTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIISLFASENVVEIVDRYDEGCIPPNY-------S-   83 (343)
Q Consensus        12 ~~~~s~~p~~~~f~QQ~L~aw~p~~tp~~vi~~f~~igiifi~iGi~l~~~s~~~~E~~i~Y~~~c~~~~~-------~-   83 (343)
                      +..++|||.+++|+|||||||||++||+.|+++||++|++|.++|+.+++++.+|+|++|+|++ |...++       + 
T Consensus        16 ~~~k~r~p~nt~F~QQrL~awqpilsp~~vLpL~flig~vf~plG~gl~~~~s~VqeltI~Ytd-c~t~as~~f~~iPs~   94 (372)
T COG5035          16 SLLKSRRPPNTAFRQQRLKAWQPILSPRTVLPLLFLIGIVFAPLGGGLLVASSSVQELTIDYTD-CMTLASDEFSDIPSE   94 (372)
T ss_pred             ccccccCCchhhHHHhhccccccccCchHHHHHHHHHHHHHhhccceEEEEeeeeeeeeecccc-cccccchhhhhCchh
Confidence            6678999999999999999999999999999999999999999999999999999999999998 765441       0 


Q ss_pred             ------------CccceeeecC-CCCceeEEEEEecCCCCCceEEEEEecchhhhhhhhhcCCCccccCCCCCCCCC--C
Q 046680           84 ------------DDMLAYIQNS-DTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQLWSKKHEDET--K  148 (343)
Q Consensus        84 ------------~~~~~~~~~~-~~~~~C~i~f~i~~~m~~pVyvYY~L~nFyQNHR~y~~Srs~~QL~G~~~~~~~--~  148 (343)
                                  ...|....+. .+..+|++.|++|++||.|||+||+|+|||||||||++|.|.+||+|+....+.  +
T Consensus        95 ~~~~~f~~~~~~~pqW~~~~~~~~d~~~C~irf~vp~~~k~~vfiyyrl~nFyQNhrRY~~S~d~dQl~Ge~~~~~~l~~  174 (372)
T COG5035          95 YIQFHFKKKVNVLPQWRFSTDEEDDFQKCQIRFTVPSDMKKPVFIYYRLTNFYQNHRRYVKSFDEDQLRGEALKSDDLKS  174 (372)
T ss_pred             heeeeeecccccccceeecccccCCcceeEEEEEchhhcccceeeeehhHHHHHhhHHHHhccCHHHhcCcccccccccc
Confidence                        0112222111 234579999999999999999999999999999999999999999999776433  7


Q ss_pred             CCCcccccCCceeeechhhhhccccceeeccc----cCeeeeeeccccCCccccccccCCC-------CCCCCCCCCccc
Q 046680          149 NCAPEATSNGLSIVPCGLIAWSLFNDSYGFSI----KNKMVKVSKKNIAWESDKKHKFGSD-------VYPKNFQNGVLI  217 (343)
Q Consensus       149 ~C~P~~~~~g~~i~PCGliA~S~FNDtF~l~~----~~~~i~~~~~gIaw~sD~~~kF~~~-------~~p~~~~~~~~~  217 (343)
                      .|.|+.+..+|+||||||||||||||||+...    +++.+.++.+||||++|++ ||+.+       ++||||.+.+++
T Consensus       175 nC~PL~~nedK~~YPcGLIaNSmfNDtf~~~l~~i~Dts~Y~lttkgIaW~sDr~-rykktkYn~sdIvpPPnW~k~ypd  253 (372)
T COG5035         175 NCKPLSYNEDKIIYPCGLIANSMFNDTFSSLLTGIEDTSNYNLTTKGIAWESDRH-RYKKTKYNASDIVPPPNWAKMYPD  253 (372)
T ss_pred             cCCcccccCCCeeecccccccccccccchhhccccccccccccccCCccchhhcc-cccCCCCChhhcCCCCchHhhCCC
Confidence            89999998889999999999999999998753    3456889999999999996 89875       468999776665


Q ss_pred             CCcccCCCCC-CcchhhHHHHHhcCCCCchhhhhhcccc-cCCCCceEEEEEEeeecccccCceEEEEEEeccccCccCc
Q 046680          218 GGGKLNSSIP-LSKQEALIVWMRTAALPTFRKLYGRIES-DIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKND  295 (343)
Q Consensus       218 ~~~~~~~~~~-~~~ne~FivWMr~Aalp~FrKLYg~i~~-~l~~g~~y~v~I~n~ypv~~F~G~K~ivlst~s~~GgkN~  295 (343)
                      |  .-|+++| +.++|.|+||||+||||+|+||++|.+. .|.+| +|+++|+.||||.+|+|+|+|||+|.|.+||||+
T Consensus       254 G--Ytd~NiPDls~wE~Fq~WMrtAafP~F~KLa~~N~~d~l~~G-~Y~lnI~l~fPv~~f~GtKsi~Ltt~SviGgkN~  330 (372)
T COG5035         254 G--YTDDNIPDLSTWEEFQNWMRTAAFPKFSKLAMRNVNDVLPPG-TYQLNITLNFPVLEFNGTKSIVLTTNSVIGGKNY  330 (372)
T ss_pred             C--CCccCCCcchhHHHHHHHhhcccCchHHHHhcccccccCCCc-eEEEEEEeecceeecCCceEEEEEecccccCCCc
Confidence            4  3466676 5799999999999999999999999776 47777 5999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccccCCC
Q 046680          296 FLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNRH  337 (343)
Q Consensus       296 ~Lgi~ylvvG~i~~i~~i~f~~~~~~~~r~~gd~~~L~w~~~  337 (343)
                      ||||+||||||+|.++|++|++.++++||++||++||+|+++
T Consensus       331 fLGI~ylivg~ical~~~if~~~~~f~pR~~~Dh~yLnw~~~  372 (372)
T COG5035         331 FLGIVYLIVGGICALLGLIFLIKWLFKPRKMADHSYLNWNME  372 (372)
T ss_pred             chhhHHHHHHHHHHHHHHHHHHHHhhCCcccCCcccccccCC
Confidence            999999999999999999999999999999999999999974

>PF03381 CDC50: LEM3 (ligand-effect modulator 3) family / CDC50 family; InterPro: IPR005045 Members of this family have no known function

Probab=100.00  E-value=7.1e-84  Score=613.51  Aligned_cols=261  Identities=50%  Similarity=0.832  Sum_probs=226.8

Q ss_pred             hhhhcCCeEEEEEcCCCCCCCCCCCCccceeeecCCCCceeEEEEEecCCCCCceEEEEEecchhhhhhhhhcCCCcccc
Q 046680           59 SLFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQLDNFYQNHRRYVKSRNDKQL  138 (343)
Q Consensus        59 l~~~s~~~~E~~i~Y~~~c~~~~~~~~~~~~~~~~~~~~~C~i~f~i~~~m~~pVyvYY~L~nFyQNHR~y~~Srs~~QL  138 (343)
                      |++++++++|++++||+.|......     ........++|.++|+||++|++||||||||+|||||||||++|||++||
T Consensus         1 ll~~s~~v~E~~~~Yd~~~~~~~~~-----~~~~~~~~~~c~v~f~i~~~~~~pVyvYY~L~nFYQNhr~y~~S~~~~QL   75 (278)
T PF03381_consen    1 LLVASNSVVEIEIRYDDCCDCQNCY-----INEFSPIPCTCSVTFNIPEDMKGPVYVYYELTNFYQNHRRYVKSRSDSQL   75 (278)
T ss_pred             CEEEeCCEEEEEEECCCCCCCCCcc-----ccccCCCCceEEEEEEcCccCCCCEEEEEEEehhhHHhHHHHhcCCHHHh
Confidence            5678999999999999987653310     00111224589999999999999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCCCCccccc---CCceeeechhhhhccccceeeccc----cCeeeeeeccccCCccccccccCCCC----
Q 046680          139 WSKKHEDE-TKNCAPEATS---NGLSIVPCGLIAWSLFNDSYGFSI----KNKMVKVSKKNIAWESDKKHKFGSDV----  206 (343)
Q Consensus       139 ~G~~~~~~-~~~C~P~~~~---~g~~i~PCGliA~S~FNDtF~l~~----~~~~i~~~~~gIaw~sD~~~kF~~~~----  206 (343)
                      +|+..+.+ .++|+|+++.   ++++++||||+|||||||||+|..    .++.++++++||||++|++.+|+++.    
T Consensus        76 ~G~~~~~~~~~~C~p~~~~~~~~~~~~~PCGliA~S~FNDtF~l~~~~~~~~~~~~~~~~gIaw~~d~~~~fk~~~~~~~  155 (278)
T PF03381_consen   76 KGKIVSKSDLSDCDPLRTNNENNGKIIYPCGLIANSMFNDTFSLYRRNSGNNENIPLDETGIAWSSDRESKFKNPHYNNS  155 (278)
T ss_pred             CCCccccCCCCCCCCceeccCCCCCEeecccHhHhhhccceEEeeecccCCCceeeeecccccCchHHHHhcCCCCCccc
Confidence            99985433 3799999986   889999999999999999999973    35679999999999999988999843    


Q ss_pred             ---CCCCCCCCcccCCcccCCCCCCc-chhhHHHHHhcCCCCchhhhhhcc-cccCCCCceEEEEEEeeecccccCceEE
Q 046680          207 ---YPKNFQNGVLIGGGKLNSSIPLS-KQEALIVWMRTAALPTFRKLYGRI-ESDIQANDSVTVIIENNYNTYSFGGKKK  281 (343)
Q Consensus       207 ---~p~~~~~~~~~~~~~~~~~~~~~-~ne~FivWMr~Aalp~FrKLYg~i-~~~l~~g~~y~v~I~n~ypv~~F~G~K~  281 (343)
                         +|++|...     .+.+...|.. +|||||||||+||||+||||||+| +++|++|+ |+|+|+|||||+.|+|+|+
T Consensus       156 ~~~~~~~W~~~-----~~~~~~~p~~~~ne~fivWMr~a~lp~FrKLYg~i~~~~L~~G~-y~i~I~nnypv~~f~G~K~  229 (278)
T PF03381_consen  156 NTVPPPNWRPG-----YENDTPWPDNSENEHFIVWMRPAALPTFRKLYGRIDNDDLPAGN-YTIDITNNYPVSSFGGKKS  229 (278)
T ss_pred             cccCCCceeee-----ccCCCCCCcccccHHHHHHhccccCCCeeEeEeeeccCCCCCce-EEEEEEEeecccccCcEEE
Confidence               36667321     1233334443 699999999999999999999999 88999996 9999999999999999999


Q ss_pred             EEEEeccccCccCcchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcc
Q 046680          282 LVLSTTTWIGGKNDFLGIAYITVGGLCLFLAISFILVYVVMPRPLGDPA  330 (343)
Q Consensus       282 ivlst~s~~GgkN~~Lgi~ylvvG~i~~i~~i~f~~~~~~~~r~~gd~~  330 (343)
                      |||+|+||+||||+|||++||++|++|+++|++|++.|+++||++||++
T Consensus       230 ivlst~s~~Ggkn~~Lgi~ylvvg~i~~v~~i~~~~~~~~~~r~~gD~~  278 (278)
T PF03381_consen  230 IVLSTTSWFGGKNYFLGIAYLVVGGICLVLAIIFLIIHYFKPRKLGDTS  278 (278)
T ss_pred             EEEEeccccCccccHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999999999999999999999999999999999999999999999985

They have predicted transmembrane helices.; GO: 0016020 membrane

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	343
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 2e-04
 Identities = 47/300 (15%), Positives = 87/300 (29%), Gaps = 92/300 (30%)

Query: 17  KKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIF-----IPVGIISLFASENVVEIVD 71
           K     K T   + +   +L P     +F  +  +F     IP  ++SL   + +   V 
Sbjct: 348 KHVNCDKLTTI-IESSLNVLEPAEYRKMFDRL-SVFPPSAHIPTILLSLIWFDVIKSDVM 405

Query: 72  RYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIY--Y-----QLDNFYQ 124
                         ++        NK    SL   +  +S + I   Y     +L+N Y 
Sbjct: 406 -------------VVV--------NKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA 444

Query: 125 NHRRYVKSRNDKQLWSKKHEDETKNCAPEATSNGLSIVPCGLIAWSLFNDSYGFSIKNKM 184
            HR  V   N  + +    +D                            D Y +S     
Sbjct: 445 LHRSIVDHYNIPKTF--DSDDLIPPY----------------------LDQYFYS----- 475

Query: 185 VKVSKKNIAW---ESDKKHKFGSDVYPKNFQNGVLIGGGKL-NSSIPLSKQEALIVWMRT 240
                 +I       +   +    ++   F +   +   K+ + S   +   ++      
Sbjct: 476 ------HIGHHLKNIEHPERM--TLFRMVFLDFRFL-EQKIRHDSTAWNASGSI-----L 521

Query: 241 AALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLGIA 300
             L   +  Y   +  I  ND     + N    +    ++ L+ S  T      D L IA
Sbjct: 522 NTLQQLKF-Y---KPYICDNDPKYERLVNAILDFLPKIEENLICSKYT------DLLRIA 571

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00