Citrus Sinensis ID: 046724

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------
Protein Sequence
MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMVSRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKLDRYSSSEKSGDSPVSLQESVAVVTFTATIFILTCQRIVPLWGSRDWENNVDGPIFLSIALQLEKEEDPFS
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHcccccccccccccccHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEcHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccEEccccccccccccHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcHHHccccccccccccccccccccccccccccHHHHHHHHHHHccccHcHcccHccccHHHHHHHHHHHcccccccc
Coil and Loop (DISEMBL)
MRRIAGSARYFRSALWHrkfdywssfttrpkdltenyhncaygvtnnAEIESFLRSKFMVSRALSTDAAASASIGevhraaagplvEYERRIIAGElldgdvcqlgtlGELQRLYDELVESadackldryssseksgdspvslQESVAVVTFTATIFILTCQRivplwgsrdwennvdgPIFLSIALQlekeedpfs
Flexible Loop (DISEMBL)
mrriagsaRYFRsalwhrkfdywSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMVSRALSTDaaasasigevhraaagplVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKLDRyssseksgdspvslQESVAVVTFTATIFILTCQRIVPLWGSRDWENNVDGPIFLSIalqlekeedpfs
Low Complexity Region (SEG)
MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMVSRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKLDRYSSSEKSGDSPVSLQESVAVVTFTATIFILTCQRIVPLWGSRDWENNVDGPIFLSIALQLEKEEDPFS
Disordered region (IsUnstruct)
*******ARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMVSRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKL******************SVAVVTFTATIFILTCQRIVPLWGSRDWENNVDGPIFLSIALQ*********
Disordered Region (DISOPRED)
******SARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMVSRALSTD*A**********AAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADA*********************SVAVVTFTATIFILTCQRIVPLWGSRDWENNVDGPIFLSIA***********
Disordered Region (DISEMBL)
MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMVSRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKLD***************QESVAVVTFTATIFILTCQRIVPLWGSRDWENNVDGPIFLSIALQLEKEEDPFS
Disordered Region (DISPRO)
*RRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMVSRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKLDRY**********VSLQESVAVVTFTATIFILTCQRIVPLWGSRDWENNVDGPIFLSIALQLE*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMVSRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKLDRYSSSEKSGDSPVSLQESVAVVTFTATIFILTCQRIVPLWGSRDWENNVDGPIFLSIALQLEKEEDPFS
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	197
224143875	507	predicted protein [Populus trichocarpa]	0.670	0.260	0.568	6e-30
147798963	504	hypothetical protein VITISV_002904 [Viti	0.695	0.271	0.514	1e-26
297743712	504	unnamed protein product [Vitis vinifera]	0.695	0.271	0.514	2e-26
225445752	502	PREDICTED: lactation elevated protein 1	0.690	0.270	0.517	5e-26
4455366	345	putative protein [Arabidopsis thaliana]	0.431	0.246	0.513	7e-22
449457857	497	PREDICTED: lactation elevated protein 1-	0.649	0.257	0.485	5e-21
42567204	464	AFG1-like protein [Arabidopsis thaliana]	0.294	0.125	0.844	3e-20
79325316	473	AFG1-like protein [Arabidopsis thaliana]	0.294	0.122	0.844	4e-20
297803274	474	ATPase [Arabidopsis lyrata subsp. lyrata	0.279	0.116	0.872	4e-20
449518075	502	PREDICTED: lactation elevated protein 1-	0.624	0.245	0.474	3e-19

>gi|224143875|ref|XP_002325105.1| predicted protein [Populus trichocarpa] gi|118487180|gb|ABK95418.1| unknown [Populus trichocarpa] gi|222866539|gb|EEF03670.1| predicted protein [Populus trichocarpa]

 Score =  136 bits (342), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/139 (56%), Positives = 95/139 (68%), Gaps = 7/139 (5%)

Query: 1   MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMV 60
           MRR   S R FR A   ++ +Y  S     K L +      Y VT+NA+I+ F   KF+ 
Sbjct: 1   MRRGVRSFRQFRYAFQRQECNYSFSLGKCQKVLIDT----GYRVTDNADIDKFSCPKFIA 56

Query: 61  SRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVE 120
           SR L+TDAA   S G+V+    GPLVEYERRI AGEL+DGD CQ+GTL ELQRLYDELVE
Sbjct: 57  SRTLTTDAA-RVSNGDVN--GGGPLVEYERRIAAGELVDGDSCQVGTLRELQRLYDELVE 113

Query: 121 SADACKLDRYSSSEKSGDS 139
           SADACKLDRY++S+KSG S
Sbjct: 114 SADACKLDRYTASDKSGRS 132

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147798963|emb|CAN65875.1| hypothetical protein VITISV_002904 [Vitis vinifera]

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/140 (51%), Positives = 90/140 (64%), Gaps = 3/140 (2%)

Query: 1   MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMV 60
           MR      R FRSA  HR++ + S  + R K       + A    +NA I  +L    MV
Sbjct: 1   MRTFVLYVRQFRSAFQHRRYSFLSDLSRRQKVSVNWXTSGASKPLHNAGIARYLLPVSMV 60

Query: 61  SRALSTDAAASAS-IGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELV 119
           +R L TD+A  A+ + EV RA  GPLVEY+RRI  GEL+DGD CQ+GTL ELQRLYD+LV
Sbjct: 61  TRNLVTDSAKVANEVKEVSRA--GPLVEYDRRIAEGELVDGDNCQVGTLRELQRLYDDLV 118

Query: 120 ESADACKLDRYSSSEKSGDS 139
            SADAC LDRY++SEK+G S
Sbjct: 119 MSADACSLDRYTASEKAGRS 138

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297743712|emb|CBI36595.3| unnamed protein product [Vitis vinifera]

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 72/140 (51%), Positives = 90/140 (64%), Gaps = 3/140 (2%)

Query: 1   MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMV 60
           MR      R FRSA  HR++ + S  + R K       + A    +NA I  +L    MV
Sbjct: 1   MRTFVLYVRQFRSAFQHRRYSFLSDLSRRQKVSVNWQTSGASKPLHNAGIARYLLPVSMV 60

Query: 61  SRALSTDAAASAS-IGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELV 119
           +R L TD+A  A+ + EV RA  GPLVEY+RRI  GEL+DGD CQ+GTL ELQRLYD+LV
Sbjct: 61  TRNLVTDSAKVANEVKEVSRA--GPLVEYDRRIAEGELVDGDNCQVGTLRELQRLYDDLV 118

Query: 120 ESADACKLDRYSSSEKSGDS 139
            SADAC LDRY++SEK+G S
Sbjct: 119 MSADACSLDRYTASEKAGRS 138

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225445752|ref|XP_002271848.1| PREDICTED: lactation elevated protein 1 [Vitis vinifera]

 Score =  123 bits (308), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/139 (51%), Positives = 89/139 (64%), Gaps = 3/139 (2%)

Query: 1   MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMV 60
           MR      R FRSA  HR++ + S  + R K       + A    +NA I  +L    MV
Sbjct: 1   MRTFVLYVRQFRSAFQHRRYSFLSDLSRRQKVSVNWQTSGASKPLHNAGIARYLLPVSMV 60

Query: 61  SRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVE 120
           +R L TD+A  A+  EV RA  GPLVEY+RRI  GEL+DGD CQ+GTL ELQRLYD+LV 
Sbjct: 61  TRNLVTDSAKVAN-EEVSRA--GPLVEYDRRIAEGELVDGDNCQVGTLRELQRLYDDLVM 117

Query: 121 SADACKLDRYSSSEKSGDS 139
           SADAC LDRY++SEK+G S
Sbjct: 118 SADACSLDRYTASEKAGRS 136

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|4455366|emb|CAB36776.1| putative protein [Arabidopsis thaliana] gi|7269661|emb|CAB79609.1| putative protein [Arabidopsis thaliana]

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 59/115 (51%), Positives = 73/115 (63%), Gaps = 30/115 (26%)

Query: 82  AGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKLDRYSSSEKSGDSPV 141
           AGPLVEYERRI+AGELLDGD+CQLGTL ELQRLYDELV+SADAC+LDRYS+S K      
Sbjct: 60  AGPLVEYERRIVAGELLDGDLCQLGTLRELQRLYDELVQSADACRLDRYSASAK------ 113

Query: 142 SLQESVAVVTFTATIFILTCQRIVPLWGSRDWENNVDGPIFLSIALQLEKEEDPF 196
                                 ++ +W SR+W++N  G +F SI  + +  EDP 
Sbjct: 114 ----------------------LILIWRSRNWKDNAHGLVFSSI--KHKGLEDPL 144

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457857|ref|XP_004146664.1| PREDICTED: lactation elevated protein 1-like [Cucumis sativus]

 Score =  106 bits (265), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/142 (48%), Positives = 86/142 (60%), Gaps = 14/142 (9%)

Query: 1   MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAE---IESFLRSK 57
           MR +   AR+ RSA        +S  T    D+          +  N+E   I    R++
Sbjct: 1   MRGVNRYARHLRSA--------FSQKTCNRTDVLRRVQRQRQLIHTNSESLFIVKPDRNR 52

Query: 58  FMVSRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDE 117
           F+  R LS DAA   S G+ +   AGPLVEYERRI AG+L+DGD CQ+GTL ELQRLYDE
Sbjct: 53  FINLRTLSLDAA-KLSNGDYN--VAGPLVEYERRIAAGDLVDGDSCQVGTLRELQRLYDE 109

Query: 118 LVESADACKLDRYSSSEKSGDS 139
           LV SA+AC+LDRY+ SEKSG S
Sbjct: 110 LVNSAEACRLDRYAVSEKSGRS 131

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42567204|ref|NP_194536.2| AFG1-like protein [Arabidopsis thaliana] gi|332660034|gb|AEE85434.1| AFG1-like protein [Arabidopsis thaliana]

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/58 (84%), Positives = 54/58 (93%)

Query: 82  AGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKLDRYSSSEKSGDS 139
           AGPLVEYERRI+AGELLDGD+CQLGTL ELQRLYDELV+SADAC+LDRYS+S KS  S
Sbjct: 60  AGPLVEYERRIVAGELLDGDLCQLGTLRELQRLYDELVQSADACRLDRYSASAKSTRS 117

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79325316|ref|NP_001031737.1| AFG1-like protein [Arabidopsis thaliana] gi|53850477|gb|AAU95415.1| At4g28070 [Arabidopsis thaliana] gi|56790192|gb|AAW30013.1| At4g28070 [Arabidopsis thaliana] gi|332660035|gb|AEE85435.1| AFG1-like protein [Arabidopsis thaliana]

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 49/58 (84%), Positives = 54/58 (93%)

Query: 82  AGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKLDRYSSSEKSGDS 139
           AGPLVEYERRI+AGELLDGD+CQLGTL ELQRLYDELV+SADAC+LDRYS+S KS  S
Sbjct: 60  AGPLVEYERRIVAGELLDGDLCQLGTLRELQRLYDELVQSADACRLDRYSASAKSTRS 117

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297803274|ref|XP_002869521.1| ATPase [Arabidopsis lyrata subsp. lyrata] gi|297315357|gb|EFH45780.1| ATPase [Arabidopsis lyrata subsp. lyrata]

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 48/55 (87%), Positives = 53/55 (96%)

Query: 82  AGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADACKLDRYSSSEKS 136
           AGPLVEYERRI+AGELLDGD+CQLGTL ELQRLYDELV+SADAC+LDRYS+S KS
Sbjct: 61  AGPLVEYERRIVAGELLDGDLCQLGTLRELQRLYDELVQSADACRLDRYSASAKS 115

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449518075|ref|XP_004166069.1| PREDICTED: lactation elevated protein 1-like [Cucumis sativus]

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/137 (47%), Positives = 82/137 (59%), Gaps = 14/137 (10%)

Query: 1   MRRIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAE---IESFLRSK 57
           MR +   AR+ RSA        +S  T    D+          +  N+E   I    R++
Sbjct: 1   MRGVNRYARHLRSA--------FSQKTCNRTDVLRRVQRQRQLIHTNSESLFIVKPDRNR 52

Query: 58  FMVSRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDE 117
           F+  R LS DAA   S G+ +   AGPLVEYERRI AG+L+DGD CQ+GTL ELQRLYDE
Sbjct: 53  FINLRTLSLDAA-KLSNGDYN--VAGPLVEYERRIAAGDLVDGDSCQVGTLRELQRLYDE 109

Query: 118 LVESADACKLDRYSSSE 134
           LV SA+AC+LDRY+ SE
Sbjct: 110 LVNSAEACRLDRYAVSE 126

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	197
TAIR|locus:2133007	473	AT4G28070 [Arabidopsis thalian	0.446	0.186	0.58	3.4e-21
TAIR|locus:2118786	497	AT4G30490 [Arabidopsis thalian	0.675	0.267	0.409	2.3e-19

TAIR|locus:2133007 AT4G28070 [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 3.4e-21, P = 3.4e-21
 Identities = 58/100 (58%), Positives = 68/100 (68%)

Query:    38 HNCAYGVTNNAEIES-FLRSKFMVSRALSTDAAASASIGEVHRAAAGPLVEYERRIIAGE 96
             HNC   +  +    S F  S F  S   + D       G++    AGPLVEYERRI+AGE
Sbjct:    26 HNCLISINPSTSSSSLFSASSFCSSPHSNGD-------GKI----AGPLVEYERRIVAGE 74

Query:    97 LLDGDVCQLGTLGELQRLYDELVESADACKLDRYSSSEKS 136
             LLDGD+CQLGTL ELQRLYDELV+SADAC+LDRYS+S KS
Sbjct:    75 LLDGDLCQLGTLRELQRLYDELVQSADACRLDRYSASAKS 114

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016887 "ATPase activity" evidence=ISS

TAIR|locus:2118786 AT4G30490 [Arabidopsis thaliana (taxid:3702)]

 Score = 238 (88.8 bits), Expect = 2.3e-19, P = 2.3e-19
 Identities = 59/144 (40%), Positives = 87/144 (60%)

Query:     3 RIAGSARYFRSALWHRKFDYWSSFTTRPKDLTENYHNCAYGVTNNAEIESFLRSKFMVSR 62
             R++  +R  R AL + +  Y S+F ++ + L    +     +  N +  S L S+  + R
Sbjct:     6 RLSSLSR-IRWALRNNQERYSSTFYSKSRKLLIGVNQNQALLNTNTD-NSSLYSRSSIFR 63

Query:    63 ALSTDAAASA-------SIGEVHRAAAGPLVEYERRIIAGELLDGDVCQLGTLGELQRLY 115
              LS +A  +A       ++ +V+R   GPLVEYERRI  GEL+ GD+CQ+  L ELQRLY
Sbjct:    64 GLSAEAVEAADPATTRVTVSDVNRT--GPLVEYERRISNGELMTGDICQISALRELQRLY 121

Query:   116 DELVESADACKLDRYSSSEKSGDS 139
             DELV+S D C+LDRY++S+KS  S
Sbjct:   122 DELVDSVDTCRLDRYNTSDKSSRS 145


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.394    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      197       197   0.00082  111 3  11 22  0.46    32
                                                     31  0.44    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  175 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  18.14u 0.17s 18.31t   Elapsed:  00:00:01
  Total cpu time:  18.15u 0.17s 18.32t   Elapsed:  00:00:01
  Start:  Thu May  9 21:18:06 2013   End:  Thu May  9 21:18:07 2013

GO:0005524 "ATP binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0016887 "ATPase activity" evidence=ISS

GO:0005516 "calmodulin binding" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0016036 "cellular response to phosphate starvation" evidence=RCA

GO:0019243 "methylglyoxal catabolic process to D-lactate" evidence=RCA

GO:0019375 "galactolipid biosynthetic process" evidence=RCA

GO:0042631 "cellular response to water deprivation" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00017116001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (502 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00020593001	SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (276 aa)	•		•						0.600
	GSVIVG00024946001	SubName- Full=Chromosome chr4 scaffold_32, whole genome shotgun sequence; (528 aa)	•		•						0.594
	GSVIVG00018534001	SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (973 aa)	•								0.544
	GSVIVG00004046001	SubName- Full=Chromosome undetermined scaffold_588, whole genome shotgun sequence; (302 aa)	•		•						0.531

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	197
KOG2383	467	consensus Predicted ATPase [General function predi	98.09
PF03969	362	AFG1_ATPase: AFG1-like ATPase; InterPro: IPR005654	97.61
COG1485	367	Predicted ATPase [General function prediction only	96.47

>KOG2383 consensus Predicted ATPase [General function prediction only]

Probab=98.09  E-value=2.8e-06  Score=80.12  Aligned_cols=42  Identities=36%  Similarity=0.536  Sum_probs=36.7

Q ss_pred             CCChHHHHHHhhcCCccCCChhHHHHHHHHHHHHHHHhh-cccc
Q 046724           82 AGPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVE-SADA  124 (197)
Q Consensus        82 ~GPL~EYerRV~sGeLrdGD~hQr~iIq~LQ~LYdeLk~-Y~p~  124 (197)
                      .+|+.+|+++|+.|.|+. |++|++++..+.+||+++.. |.|+
T Consensus        34 ~tpl~~y~k~V~~g~l~~-d~yq~~~~~~~~~L~~~~~e~y~p~   76 (467)
T KOG2383|consen   34 LTPLKEYSKLVNTGTLKS-DPYQRKTVSAFERLYHELIEYYDPR   76 (467)
T ss_pred             cCcchHHHhHhccCcccC-CchhhhhHHHHHHHHhhhhhhcCcc
Confidence            379999999999999999 99999999999999995544 4444

>PF03969 AFG1_ATPase: AFG1-like ATPase; InterPro: IPR005654 ATPase family gene 1 (AFG1) ATPase is a 377 amino acid putative protein with an ATPase motif typical of the protein family including SEC18p PAS1, CDC48-VCP and TBP

Probab=97.61  E-value=4.6e-05  Score=68.58  Aligned_cols=41  Identities=39%  Similarity=0.611  Sum_probs=39.6

Q ss_pred             CChHHHHHHhhcCCccCCChhHHHHHHHHHHHHHHHhhcccc
Q 046724           83 GPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADA  124 (197)
Q Consensus        83 GPL~EYerRV~sGeLrdGD~hQr~iIq~LQ~LYdeLk~Y~p~  124 (197)
                      .|+++|+.+|++|.+++ |+.|++.+++||.||++|..+.++
T Consensus         2 tp~~~y~~~~~~~~~~~-D~~q~~~~~~l~~l~~~l~~~~~~   42 (362)
T PF03969_consen    2 TPLERYQARVAQGELFP-DPAQRQAIEHLDRLYQELQKYKPA   42 (362)
T ss_pred             ChHHHHHHHhcCCCCCC-CHHHHHHHHhHHHHHHHHHhcccc
Confidence            59999999999999999 999999999999999999999886

AFG1 also has substantial homology to these proteins outside the ATPase domain []. This family of proteins contains a P-loop motif.; GO: 0005524 ATP binding

>COG1485 Predicted ATPase [General function prediction only]

Probab=96.47  E-value=0.0034  Score=58.29  Aligned_cols=41  Identities=37%  Similarity=0.558  Sum_probs=36.6

Q ss_pred             CChHHHHHHhhcCCccCCChhHHHHHHHHHHHHHHHhhcccc
Q 046724           83 GPLVEYERRIIAGELLDGDVCQLGTLGELQRLYDELVESADA  124 (197)
Q Consensus        83 GPL~EYerRV~sGeLrdGD~hQr~iIq~LQ~LYdeLk~Y~p~  124 (197)
                      .|.+.|++.++.|.+.+ |+.|..++++|++||+++....+.
T Consensus        10 sp~~~y~~~~~~~~~~~-D~aQ~~a~~~Ldrl~~~~~~~~~~   50 (367)
T COG1485          10 SPVERYAQLVPAGTFQP-DPAQPAAAAALDRLYDELVAPRSA   50 (367)
T ss_pred             CHHHHHHHhcccCCCCC-ChHHHHHHHHHHHHHHHhhccccc
Confidence            69999999999999999 999999999999999966554443

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00