Citrus Sinensis ID: 046759
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 386 | ||||||
| 296087799 | 474 | unnamed protein product [Vitis vinifera] | 0.769 | 0.626 | 0.433 | 6e-71 | |
| 224101389 | 686 | glycosyltransferase family-37 [Populus t | 0.471 | 0.265 | 0.630 | 2e-66 | |
| 255562938 | 578 | Galactoside 2-alpha-L-fucosyltransferase | 0.474 | 0.316 | 0.617 | 4e-66 | |
| 356512053 | 552 | PREDICTED: galactoside 2-alpha-L-fucosyl | 0.520 | 0.364 | 0.565 | 1e-65 | |
| 154163107 | 578 | alpha-1,2-fucosyltransferase [Populus tr | 0.474 | 0.316 | 0.622 | 2e-65 | |
| 449434762 | 571 | PREDICTED: galactoside 2-alpha-L-fucosyl | 0.471 | 0.318 | 0.605 | 4e-64 | |
| 20138107 | 565 | RecName: Full=Galactoside 2-alpha-L-fuco | 0.5 | 0.341 | 0.558 | 1e-63 | |
| 147817757 | 661 | hypothetical protein VITISV_031725 [Viti | 0.479 | 0.279 | 0.565 | 7e-62 | |
| 225457363 | 573 | PREDICTED: galactoside 2-alpha-L-fucosyl | 0.481 | 0.324 | 0.562 | 1e-61 | |
| 356508535 | 555 | PREDICTED: galactoside 2-alpha-L-fucosyl | 0.520 | 0.362 | 0.532 | 4e-61 |
| >gi|296087799|emb|CBI35055.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 151/348 (43%), Positives = 202/348 (58%), Gaps = 51/348 (14%)
Query: 83 YLIYKLINYEALHKYCGPKTQSYNKTLKKVKSSHSSSGSAGTDCKYVVWVAFSGLGNKVL 142
YL+ +L YE LHK+CGP T+SY KT+K +KS HS TDC YVVW+++SGLGN++L
Sbjct: 118 YLLSRLRKYEDLHKHCGPHTKSYRKTIKLLKSGHSV---GPTDCNYVVWISYSGLGNRIL 174
Query: 143 SVTAVLLYALLTNRVMLIDRGEDTVDLFYEPFPKTSWIPPLDFLITQKFNGFNMKSPESS 202
++ + LYALLTNRV+L+DRG+D DLF EPFP+ SW+ PLDF + KFN N +SP
Sbjct: 175 TLASAFLYALLTNRVLLVDRGKDMADLFCEPFPEKSWLLPLDFPLLPKFNSINKESPHCF 234
Query: 203 LAKADERIGIQVRVFDTRPGPFKYVM--------DQILDCTLKQKLL------------- 241
I + +P PF Y+ D++ C +Q LL
Sbjct: 235 GKMLKNNI---INSSTEQPPPFLYIYLSHDYGDHDKLFFCDQEQTLLGKVPWLIMKTNNY 291
Query: 242 --------PEVDNDESAI---KSSAKPKLKAVLVTSLNSRYYGILRNMYWEYSTVTGDMV 290
P + + S + K + L L N + I RNMYWE S ++G++V
Sbjct: 292 FVPSLFLMPSFEQELSKLFPEKETTFHHLGRYLFHPSNQVWGLITRNMYWEQSAMSGEVV 351
Query: 291 TVYQPSHEEYQQTEKSSHNGKALAEMYLLGITDVLITSSW-------------FETMLFK 337
+VYQPSHEE QQ+EK HN KA AEMYLL T+ LITS+W +L+K
Sbjct: 352 SVYQPSHEEVQQSEKQGHNRKAWAEMYLLSTTEALITSAWSTFGYVAQGLGGVTPWILYK 411
Query: 338 AENDTTPNPACQKDESMEPCFHTPPFYDCRGKSGIDTGSMVPYVTHCR 385
+N T P+P C + SMEPCFH PPFYDC+ K+G+DTG++VP+V HC
Sbjct: 412 PQNRTAPDPPCGRAMSMEPCFHAPPFYDCKAKTGVDTGALVPHVRHCE 459
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224101389|ref|XP_002312258.1| glycosyltransferase family-37 [Populus trichocarpa] gi|222852078|gb|EEE89625.1| glycosyltransferase family-37 [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|255562938|ref|XP_002522474.1| Galactoside 2-alpha-L-fucosyltransferase, putative [Ricinus communis] gi|223538359|gb|EEF39966.1| Galactoside 2-alpha-L-fucosyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
| >gi|356512053|ref|XP_003524735.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|154163107|gb|ABS70459.1| alpha-1,2-fucosyltransferase [Populus tremula x Populus alba] | Back alignment and taxonomy information |
|---|
| >gi|449434762|ref|XP_004135165.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Cucumis sativus] gi|449522873|ref|XP_004168450.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|20138107|sp|Q9M5Q1.1|FUT1_PEA RecName: Full=Galactoside 2-alpha-L-fucosyltransferase; AltName: Full=PsFT1; AltName: Full=Xyloglucan alpha-(1,2)-fucosyltransferase gi|7453579|gb|AAF62896.1|AF223643_1 xyloglucan fucosyltransferase [Pisum sativum] | Back alignment and taxonomy information |
|---|
| >gi|147817757|emb|CAN66665.1| hypothetical protein VITISV_031725 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225457363|ref|XP_002284788.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356508535|ref|XP_003523011.1| PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 386 | ||||||
| TAIR|locus:2056886 | 558 | FT1 "fucosyltransferase 1" [Ar | 0.479 | 0.331 | 0.585 | 1.1e-91 | |
| TAIR|locus:2056901 | 539 | FUT2 "fucosyltransferase 2" [A | 0.479 | 0.343 | 0.5 | 8.5e-77 | |
| TAIR|locus:2047193 | 514 | FUT10 "fucosyltransferase 10" | 0.476 | 0.357 | 0.474 | 1.2e-71 | |
| TAIR|locus:2047173 | 533 | FUT5 "fucosyltransferase 5" [A | 0.471 | 0.341 | 0.479 | 1.8e-70 | |
| TAIR|locus:2035812 | 516 | FUT8 "fucosyltransferase 8" [A | 0.484 | 0.362 | 0.450 | 1.8e-70 | |
| TAIR|locus:2047208 | 535 | FUT4 "fucosyltransferase 4" [A | 0.471 | 0.340 | 0.461 | 2.6e-67 | |
| TAIR|locus:2019120 | 525 | FUT3 "fucosyltransferase 3" [A | 0.450 | 0.331 | 0.365 | 6.8e-54 | |
| TAIR|locus:2035824 | 474 | FUT9 "fucosyltransferase 9" [A | 0.287 | 0.234 | 0.477 | 1.8e-47 |
| TAIR|locus:2056886 FT1 "fucosyltransferase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 591 (213.1 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 116/198 (58%), Positives = 145/198 (73%)
Query: 200 ESSLAKADERIGIQVRVFDTRPGPFKYVMDQILDCTLKQKLLPEVDNDESAIKSSAKPKL 259
E+ L+ ADE+IGIQVRVFD PGPF++VMDQI CT K+KLLPEVD + PK
Sbjct: 351 EAYLSHADEKIGIQVRVFDEDPGPFQHVMDQISSCTQKEKLLPEVDTLVERSRHVNTPKH 410
Query: 260 KAVLVTSLNSRYYGILRNMYWEYSTVTGDMVTVYQPSHEEYQQTEKSSHNGKALAEMYLL 319
KAVLVTSLN+ Y L++MYWEY T TG+++ V+QPS E YQQTEK HNGKALAEMYLL
Sbjct: 411 KAVLVTSLNAGYAENLKSMYWEYPTSTGEIIGVHQPSQEGYQQTEKKMHNGKALAEMYLL 470
Query: 320 GITDVLITSSW--F-----------ETMLFKAENDTTPNPACQKDESMEPCFHTPPFYDC 366
+TD L+TS+W F +L++ EN TTP+P+C + SMEPCFH+PPFYDC
Sbjct: 471 SLTDNLVTSAWSTFGYVAQGLGGLKPWILYRPENRTTPDPSCGRAMSMEPCFHSPPFYDC 530
Query: 367 RGKSGIDTGSMVPYVTHC 384
+ K+GIDTG++VP+V HC
Sbjct: 531 KAKTGIDTGTLVPHVRHC 548
|
|
| TAIR|locus:2056901 FUT2 "fucosyltransferase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2047193 FUT10 "fucosyltransferase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2047173 FUT5 "fucosyltransferase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2035812 FUT8 "fucosyltransferase 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2047208 FUT4 "fucosyltransferase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2019120 FUT3 "fucosyltransferase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2035824 FUT9 "fucosyltransferase 9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 386 | |||
| pfam03254 | 473 | pfam03254, XG_FTase, Xyloglucan fucosyltransferase | 6e-94 | |
| pfam03254 | 473 | pfam03254, XG_FTase, Xyloglucan fucosyltransferase | 1e-49 |
| >gnl|CDD|217456 pfam03254, XG_FTase, Xyloglucan fucosyltransferase | Back alignment and domain information |
|---|
Score = 288 bits (740), Expect = 6e-94
Identities = 109/182 (59%), Positives = 135/182 (74%), Gaps = 14/182 (7%)
Query: 200 ESSLAKADERIGIQVRVFDTRPGPFKYVMDQILDCTLKQKLLPEVDNDESAIKSSAK-PK 258
++ LAKADERIGIQ+RVFD +PGPF++V+DQIL CT K+KLLPEVD E + ++ K
Sbjct: 291 QAYLAKADERIGIQIRVFDEKPGPFQHVLDQILACTQKEKLLPEVDTQEPSSAPPSRNQK 350
Query: 259 LKAVLVTSLNSRYYGILRNMYWEYSTVTGDMVTVYQPSHEEYQQTEKSSHNGKALAEMYL 318
KAVLVTSL S YY ++NMYWE+ TVTG++V VYQPSHEEYQQT K+ HN KALAEMYL
Sbjct: 351 SKAVLVTSLYSEYYEKIKNMYWEHPTVTGEVVGVYQPSHEEYQQTGKNMHNQKALAEMYL 410
Query: 319 LGITDVLITSSW--F-----------ETMLFKAENDTTPNPACQKDESMEPCFHTPPFYD 365
L +TDVL+TS+W F +L+K EN T P+P C++ SMEPCFH PP YD
Sbjct: 411 LSLTDVLVTSAWSTFGYVAQGLGGLKPWILYKPENGTAPDPPCRRAMSMEPCFHAPPSYD 470
Query: 366 CR 367
C+
Sbjct: 471 CK 472
|
Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. Length = 473 |
| >gnl|CDD|217456 pfam03254, XG_FTase, Xyloglucan fucosyltransferase | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 386 | |||
| PF03254 | 476 | XG_FTase: Xyloglucan fucosyltransferase; InterPro: | 100.0 | |
| PF05830 | 321 | NodZ: Nodulation protein Z (NodZ); InterPro: IPR00 | 99.27 | |
| PF01531 | 298 | Glyco_transf_11: Glycosyl transferase family 11; I | 92.46 | |
| PF10250 | 351 | O-FucT: GDP-fucose protein O-fucosyltransferase; I | 84.23 |
| >PF03254 XG_FTase: Xyloglucan fucosyltransferase; InterPro: IPR004938 Plant cell walls are crucial for development, signal transduction, and disease resistance in plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-127 Score=972.88 Aligned_cols=294 Identities=60% Similarity=1.054 Sum_probs=279.3
Q ss_pred cccccCC---------------chhh-----------HHHHHHHhHHhhhhccCCCChhHHHHHHHhhccCCCCCCCCCC
Q 046759 72 DARILEA---------------RSFL-----------YLIYKLINYEALHKYCGPKTQSYNKTLKKVKSSHSSSGSAGTD 125 (386)
Q Consensus 72 ~d~Llgg---------------~s~~-----------yLvskLR~YEalHrrCgPgT~~Y~~a~~~L~s~~~~~~~~~~~ 125 (386)
+|||||| ||++ ||++|||+||+|||||||||++|+||+++|++|++ ++ +++
T Consensus 34 ~d~llgglL~~~fde~sC~SRy~~~~yrk~s~~~pSpyL~skLR~YE~lHrrCgp~t~~y~~a~~~L~s~~~-~~--~~~ 110 (476)
T PF03254_consen 34 NDKLLGGLLSPGFDERSCLSRYQSSLYRKPSPHKPSPYLVSKLRRYEALHRRCGPGTESYNKAVEQLRSGHS-DG--TSE 110 (476)
T ss_pred cccccccccCCCCCcccccchhhhhhhcCCCCCCCCHHHHHHHHHHHHHHhhhCCCchhhHHHHHHHhccCC-CC--CCC
Confidence 7999999 5554 99999999999999999999999999999999976 44 789
Q ss_pred ccEEEeeccCCcchhHHHHHHHHHHHHHhCcEeeeecCCCCCCCccccCCCCCCCCCCCCcccccccCCCCCCCcc----
Q 046759 126 CKYVVWVAFSGLGNKVLSVTAVLLYALLTNRVMLIDRGEDTVDLFYEPFPKTSWIPPLDFLITQKFNGFNMKSPES---- 201 (386)
Q Consensus 126 CkYlVw~~~~GLGNRmLslaSAFLYALLT~RVLLVd~~~d~~~LFCEPFPgsSWlLP~dFPl~~~~~~~~~~s~~s---- 201 (386)
||||||++++|||||||+||||||||||||||||||+++||++|||||||||||+||+|||+.+.+++|+.++++|
T Consensus 111 CkYvVw~~~~GLGNRmLslaSaFLYAlLT~RVLLV~~~~d~~~LFCEPFpgsSWlLP~dFP~~~~~~~~~~~~~~sygnm 190 (476)
T PF03254_consen 111 CKYVVWIPYSGLGNRMLSLASAFLYALLTNRVLLVDPGKDMADLFCEPFPGSSWLLPPDFPLKNQLNGFSQESAESYGNM 190 (476)
T ss_pred CcEEEEecCCchHHHHHHHHHHHHHHHHhCcEEEEecCCchhhhhcCCCCCCceeCcCCCCchhhccCCCCCchHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998778888777665
Q ss_pred --------------------------------------------------------------------------------
Q 046759 202 -------------------------------------------------------------------------------- 201 (386)
Q Consensus 202 -------------------------------------------------------------------------------- 201 (386)
T Consensus 191 l~~~~~~~~~~~~p~~vyl~L~~~~~~~d~~FfCd~~Q~~L~~vpWLil~sd~YFvP~LFl~P~f~~eL~~lFP~k~tvF 270 (476)
T PF03254_consen 191 LKNKSINNSDNSLPPYVYLHLEHDYDDHDKLFFCDEDQALLRKVPWLILRSDQYFVPSLFLVPSFRPELDRLFPEKDTVF 270 (476)
T ss_pred HhcCCccccccCCCceeEEEecccCCcCCCceecCccHHHHhcCCeEEEecCcceeehhhhchHHHHHHHHhcCChhHHH
Confidence
Q ss_pred ------------------------ccccccceeeeEEEEcCCCCCChHHHHHHHHhhhhccCCCCCC-ccccc-ccccCC
Q 046759 202 ------------------------SLAKADERIGIQVRVFDTRPGPFKYVMDQILDCTLKQKLLPEV-DNDES-AIKSSA 255 (386)
Q Consensus 202 ------------------------yLa~AderiGIQvRvF~~~~~p~~~v~dQIl~Ct~~e~LLPev-~~~~~-~~~~~~ 255 (386)
|||+||||||||||||+++++||++++|||++|+++|||||+| +++++ ++++.+
T Consensus 271 hhL~RYLfhPsN~VW~~Itryy~ayLa~Ad~riGIQIRvf~~~~~~~~~~~dqIl~C~~~e~LLP~v~~~~~~~~~~~~~ 350 (476)
T PF03254_consen 271 HHLGRYLFHPSNQVWGLITRYYDAYLAKADERIGIQIRVFDPKPGPFQHVLDQILSCTQQEKLLPEVVDTQEPAASSSSK 350 (476)
T ss_pred HHHHHHHcCCCchhHHHHHHHHHHHccCcCceeEEEEEecCCCCCcchhHHHHHHHHHhhcccCCCccccccccccccCC
Confidence 9999999999999999999999999999999999999999999 44444 455677
Q ss_pred CCceeEEEEeccchHHHHHHHHhhccccccccceEEEEcCCchhhhhccccchhHHHHHHHHHHhhccceeccCccc---
Q 046759 256 KPKLKAVLVTSLNSRYYGILRNMYWEYSTVTGDMVTVYQPSHEEYQQTEKSSHNGKALAEMYLLGITDVLITSSWFE--- 332 (386)
Q Consensus 256 ~~k~kAVLVtSL~~~Y~e~Lr~mY~~~~T~tGe~V~V~QPShEe~Q~~~~~~Hn~KAlaEmyLLSlsDvLVTS~~ST--- 332 (386)
+.++||||||||++||||+||+|||++||++||+|+||||||||+|++++++||+|||||||||||||+||||+|||
T Consensus 351 ~~~~kaVlVtSL~~~yye~lr~~Y~~~~t~tGe~V~V~QpShe~~Q~~~~~~h~~kAlaEmyLLS~sD~LVTS~~STFGY 430 (476)
T PF03254_consen 351 SQKSKAVLVTSLYSEYYEKLRNMYWEHPTVTGEVVGVHQPSHEEYQQFGDNMHNQKALAEMYLLSLSDVLVTSGWSTFGY 430 (476)
T ss_pred CCceEEEEEEeCCHHHHHHHHHHHhcCCCcCCcEEEEECCCCcccccccccchHHHHHHHHHHHHhccceEecCCCCchh
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----------eeeeecCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 046759 333 ----------TMLFKAENDTTPNPACQKDESMEPCFHTPPFYDCRG 368 (386)
Q Consensus 333 ----------WiL~~p~~~~~p~ppC~r~~SmEPCfH~PP~ydC~~ 368 (386)
|||++|+|.++|||||+|++|||||||+||+|||+|
T Consensus 431 VAqgLgGl~PwiL~~~~~~~~~~ppC~r~~S~EPCfh~pp~~dC~a 476 (476)
T PF03254_consen 431 VAQGLGGLRPWILYKPENQTVPDPPCVRAMSMEPCFHAPPFYDCKA 476 (476)
T ss_pred HHHhhcCCCceEEecCcccCCCCCCCcCCCCCCCCCCCCCcCCCCC
Confidence 999999999999999999999999999999999986
|
Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue []. ; GO: 0008107 galactoside 2-alpha-L-fucosyltransferase activity, 0042546 cell wall biogenesis, 0016020 membrane |
| >PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation | Back alignment and domain information |
|---|
| >PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 386 | |||
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 3e-09 | |
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 9e-08 |
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Length = 330 | Back alignment and structure |
|---|
Score = 57.2 bits (137), Expect = 3e-09
Identities = 22/132 (16%), Positives = 43/132 (32%), Gaps = 9/132 (6%)
Query: 201 SSLAKADERIGIQVRVFDTRPGPFKYVMDQILDCTLKQKLLPEVDNDESAIKSSAKPKLK 260
IG+ VR + + +M+ + L +V K+ + PK
Sbjct: 163 EEHFSGHSIIGVHVRHGN-----GEDIMEHAPYWADSELALHQVCMAIRKAKALSYPKPV 217
Query: 261 AVLVTSLNSRYYGILRNMYWEYSTVTGDMV-TVYQPSHEEYQQTEKSSHNGKALAEMYLL 319
V + + +++ + ++ + V P H E + AL +MYLL
Sbjct: 218 KVFLCTDSAQVLDQVSGLFPDVFAVPKRFQADRAGPLHSAEMGIEGGA---SALIDMYLL 274
Query: 320 GITDVLITSSWF 331
+I
Sbjct: 275 ARCATVIRFPPT 286
|
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* Length = 330 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 386 | |||
| 2hhc_A | 330 | NODZ, nodulation fucosyltransferase NODZ; glycosyl | 99.96 | |
| 2de0_X | 526 | Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran | 98.83 | |
| 3zy2_A | 362 | Putative GDP-fucose protein O-fucosyltransferase; | 88.29 |
| >2hhc_A NODZ, nodulation fucosyltransferase NODZ; glycosyltransferase; 1.54A {Bradyrhizobium SP} PDB: 2hlh_A 2ocx_A* 3siw_A* 3six_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=240.10 Aligned_cols=187 Identities=20% Similarity=0.223 Sum_probs=131.3
Q ss_pred CCccEEEeeccCCcchhHHHHHHHHHHHHHhCcEeeeecCCCCCCCccccCCCCCCCCCCCCc-cc---------c----
Q 046759 124 TDCKYVVWVAFSGLGNKVLSVTAVLLYALLTNRVMLIDRGEDTVDLFYEPFPKTSWIPPLDFL-IT---------Q---- 189 (386)
Q Consensus 124 ~~CkYlVw~~~~GLGNRmLslaSAFLYALLT~RVLLVd~~~d~~~LFCEPFPgsSWlLP~dFP-l~---------~---- 189 (386)
..||||||....||||||+.+|+||+||++|+|+|+||+.+ ++||+ .|+++|+ |.+|| +. +
T Consensus 2 ~~~r~iv~~~~gGLGNqm~~~a~a~~~A~~t~r~l~vd~~~---~~y~~-~~~~~~f-p~~F~~v~~~~~~~~~~~~~~~ 76 (330)
T 2hhc_A 2 TKERFVISRRRTGFGDCLWSLASAWSYAQRTGRTLVIDWRG---SCYVE-QPFSNAF-PAFFEPVEDIAGVPVICDDRVN 76 (330)
T ss_dssp CCCCEEEEECCSCHHHHHHHHHHHHHHHHHHTCEEEEECBT---CTTCS-STTSBSH-HHHBCCCSEETTEEEECSGGGG
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHHHHHHhCCEEEEECCC---cccCC-CCccccC-cccccchhhhcccceecccccc
Confidence 36999999999999999999999999999999999999987 57996 5778887 77775 10 0
Q ss_pred -----------cccC-----CC--------------------CCCC--------------c---c---------------
Q 046759 190 -----------KFNG-----FN--------------------MKSP--------------E---S--------------- 201 (386)
Q Consensus 190 -----------~~~~-----~~--------------------~~s~--------------~---s--------------- 201 (386)
.+.. +. .+.. . .
T Consensus 77 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~w~~~~~~~~~i~~yl~p~~~i~~ 156 (330)
T 2hhc_A 77 QLSFPGPFFPRWWNRPSIDCINRPDEQIFRERDELTELFQAREDSEANTIVCDACLMWRCSEEAERLIFRNIKLRSEIRA 156 (330)
T ss_dssp TCCCCSSEESGGGGSCGGGGSCCCHHHHHHHHHHHHHHHHSSSCCSCSEEEECSCCTTSSCHHHHHHHHHHSCBCHHHHH
T ss_pred cccCCCCcCchhhhccccccccChHHhhhhhhhhhhhhhhhhhccCCCeEEcccccccchhhhhHHHHHhcCCccHHHHH
Confidence 0000 00 0000 0 0
Q ss_pred --------ccccccceeeeEEEEcCCCCCCh--------HHHHHHHHhhhhccCCCCCCcccccccccCCCCceeEEEEe
Q 046759 202 --------SLAKADERIGIQVRVFDTRPGPF--------KYVMDQILDCTLKQKLLPEVDNDESAIKSSAKPKLKAVLVT 265 (386)
Q Consensus 202 --------yLa~AderiGIQvRvF~~~~~p~--------~~v~dQIl~Ct~~e~LLPev~~~~~~~~~~~~~k~kAVLVt 265 (386)
+++ .+..||||||..+...... ...++++.+|+.+.+.+++. +.++|||+
T Consensus 157 ~i~~~~~~~~~-~~~~VGVHIRrgD~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~-------------~~~~vfva 222 (330)
T 2hhc_A 157 RIDALYEEHFS-GHSIIGVHVRHGNGEDIMEHAPYWADSELALHQVCMAIRKAKALSYP-------------KPVKVFLC 222 (330)
T ss_dssp HHHHHHHHHTT-TSEEEEEEECC------------CHHHHHHHHHHHHHHHHHHTSCCS-------------SCEEEEEE
T ss_pred HHHHHHHHhcc-CCceEEEEEecCCCCcccccCcchHHHhHHHHHHHHHHHHHHhccCc-------------CceEEEEE
Confidence 333 3689999999998543221 22389999999988877642 45799999
Q ss_pred ccchHHHHHHHHhhccccccccceEEEE-cCCchhhhhccccchhHHHHHHHHHHhhcccee-ccCccc
Q 046759 266 SLNSRYYGILRNMYWEYSTVTGDMVTVY-QPSHEEYQQTEKSSHNGKALAEMYLLGITDVLI-TSSWFE 332 (386)
Q Consensus 266 SL~~~Y~e~Lr~mY~~~~T~tGe~V~V~-QPShEe~Q~~~~~~Hn~KAlaEmyLLSlsDvLV-TS~~ST 332 (386)
|..++|.+++|++|++..+.+++.+... ++.|... .+..|+++|++||||||.||.+| |+++||
T Consensus 223 SDd~~~~~~lk~~~~~~~~~~~~~~~~~~~~~h~~~---~~~~~~~~~~~Dm~LLS~cd~~I~~~~~ST 288 (330)
T 2hhc_A 223 TDSAQVLDQVSGLFPDVFAVPKRFQADRAGPLHSAE---MGIEGGASALIDMYLLARCATVIRFPPTSA 288 (330)
T ss_dssp ESCHHHHHHHHHHSTTEECCCC-----------CHH---HHHHHHHHHHHHHHHHTTCSEEEEESTTCG
T ss_pred eCCHHHHHHHHHHcCCcccccceeecccccccccCc---hhhccchHHHHHHHHHHcCCeeEECCCCCC
Confidence 9999999999999998766666533211 2233221 23457899999999999999999 888999
|
| >2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens} | Back alignment and structure |
|---|
| >3zy2_A Putative GDP-fucose protein O-fucosyltransferase; glycosyltransferase, GT-B, catalytic mechanism,; HET: GDP; 1.54A {Caenorhabditis elegans} PDB: 3zy3_A* 3zy4_A* 3zy5_A* 3zy6_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00