Citrus Sinensis ID: 046793

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------
Protein Sequence
SKMISQNARFQATTSSSQLYIIQLPINRIHPRPHNSSNDDANISFTFLLLWVSLLLFIVALILLLIFIIFLFVVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTISAFAKVQDTFIEFLRRHVDSCIILRMMLFMV
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEcccccEEEEEEEccccccccEEEEEEEEEEEEccccEEEEEEccccEEEEEEEccEEEEEcccccccEEccccEEEEEEEEEEcccHHHHHHHHHccccEEEEEEEEEEEEEEEEEEEEEcEEEEEEEEEEEccccccccccEEEEEEEEcEEEEEEEEEEEc
Secondary Structure Prediction (SSPRO)
cccccccccccccccccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccccccEEEEEEEEEccccEEEEEEccccEEEEEEEcccEEEccccccccccccccEEEEEEEEEccccccHHHHHHHHcccEEEEEEEEEEEEEEEEEEEEcEEEEEEEEEEEEccHHccccccccEEEEcccHHHHHHHHHHcc
Coil and Loop (DISEMBL)
skmisqnarfqattsssqLYIIQlpinrihprphnssnddaniSFTFLLLWVSLLLFIVALILLLIFIIFLFvvrpkgpkyyidnlipinqssyyDVIYNFSirsknpnchmgiiyqndgivsLSLKQQVIAIgngkfpkfyhgtkKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTISAFAKVQDTFIEFLRRHVDSCIILRMMLFMV
Flexible Loop (DISEMBL)
skmisqnarfqattsssqlYIIQLPINRIHPRPHNSSNDDANISFTFLLLWVSLLLFIVALILLLIFIIFLFVVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDEKIQlplsllinvpvkFKIWLVKSWRMKIVIRCEMTISAFAKVQDTFIEFLRRHVDSCIILRMMLFMV
Low Complexity Region (SEG)
SKMISQNARFQATTSSSQLYIIQLPINRIHPRPHNSSNDDANISFTflllwvslllfivalilllifiiflfvvRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTISAFAKVQDTFIEFLRRHVDSCIILRMMLFMV
Disordered region (IsUnstruct)
*****************QLYIIQLPINRIH**********ANISFTFLLLWVSLLLFIVALILLLIFIIFLFVVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTISAFAKVQDTFIEFLRRHVDSCIILRMMLF**
Disordered Region (DISOPRED)
********************************************FTFLLLWVSLLLFIVALILLLIFIIFLFVVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKH***********KIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTIS**************RHVDSCIILRMMLFMV
Disordered Region (DISEMBL)
**************SSSQLYIIQLPINRIHPRPHNSSNDDANISFTFLLLWVSLLLFIVALILLLIFIIFLFVVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTISAFAKVQDTFIEFLRRHVDSCIILRMMLFMV
Disordered Region (DISPRO)
************TTSSSQLYIIQLPINRIHPRPHNSSNDDANISFTFLLLWVSLLLFIVALILLLIFIIFLFVVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTISAFAKVQDTFIEFLRRHVDSCIILRMMLFMV
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
SKMISQNARFQATTSSSQLYIIQLPINRIHPRPHNSSNDDANISFTFLLLWVSLLLFIVALILLLIFIIFLFVVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTISAFAKVQDTFIEFLRRHVDSCIILRMMLFMV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
224082144	257	predicted protein [Populus trichocarpa]	0.818	0.754	0.319	4e-16
356518493	259	PREDICTED: uncharacterized protein LOC10	0.801	0.733	0.272	9e-14
356501342	273	PREDICTED: uncharacterized protein LOC10	0.805	0.699	0.258	1e-12
356554299	273	PREDICTED: uncharacterized protein LOC10	0.805	0.699	0.253	2e-12
297822321	260	hypothetical protein ARALYDRAFT_481588 [	0.839	0.765	0.270	3e-12
18401317	260	late embryogenesis abundant hydroxyproli	0.831	0.757	0.251	3e-12
297822349	225	predicted protein [Arabidopsis lyrata su	0.767	0.808	0.252	5e-12
255545676	243	conserved hypothetical protein [Ricinus	0.780	0.761	0.276	5e-12
356510197	255	PREDICTED: uncharacterized protein LOC10	0.797	0.741	0.265	4e-11
388501634	265	unknown [Medicago truncatula]	0.797	0.713	0.253	1e-10

>gi|224082144|ref|XP_002306581.1| predicted protein [Populus trichocarpa] gi|222856030|gb|EEE93577.1| predicted protein [Populus trichocarpa]

 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 114/219 (52%), Gaps = 25/219 (11%)

Query: 20  YIIQLPINRIH--PRPHNSS--------NDDANISFTFLLLWVSLLLFIVALILLLIFII 69
           Y+IQ+P ++I+  P P N+S        +   + S      +    + I + I + + I+
Sbjct: 34  YVIQIPRDQIYRVPPPGNASVAQRQRNPHQKKHKSCCGCSCFWCCFIAIASGIAVAVTIV 93

Query: 70  FL--FVVRPKGPKYYIDNLIPIN-QSSYYDVIY-NFSIR--SKNPNCHMGIIYQNDGIVS 123
            L   +++PK P++ +   +  N Q S +   Y N+ IR    N N    I+YQ  G VS
Sbjct: 94  GLSFILLKPKDPEFQVQRFVVKNPQVSKHKYSYTNYDIRLNVHNSNRRSSILYQQGGAVS 153

Query: 124 LSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKH---PKEIEDILKDEKIQLP--LSL 178
           LS +QQ +A G  KFP F+ G K S    ++L       PK++++ L++ K ++P   SL
Sbjct: 154 LSFRQQNVATG--KFPTFHQGHKNSTDIGIVLKGTGVGLPKDVQNSLRNRKSKVPDSFSL 211

Query: 179 LINVPVKFKIWLVKSWRMKIVIRCEMTISAFAKVQDTFI 217
            +NVPVK K    K+ R +IV+ C+ T+ + A  QDT I
Sbjct: 212 KMNVPVKMKTSGFKTGRAEIVVTCDFTVQSLA--QDTHI 248

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518493|ref|XP_003527913.1| PREDICTED: uncharacterized protein LOC100816505 [Glycine max]

 Score = 83.2 bits (204), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 23/213 (10%)

Query: 20  YIIQLPINRIH--PRPHNSS----------NDDANISFTFLLLWVSLLLFIVALILLLIF 67
           Y++Q+P ++++  P P N+           N +A  S   L   +  ++F+V  ILL   
Sbjct: 37  YVVQVPKDQVYRVPPPENAQIAESHKKSPPNKEAKTSRCCLCCVLFFIIFLVLAILLGAV 96

Query: 68  IIFLF--VVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLS 125
           +  LF  ++ P+ PK+ I +   +    +    Y+ ++   NPN  +GI+Y   G VSLS
Sbjct: 97  LGGLFSMLLTPEDPKFSITSFKVVETKPHPK--YDVTLEVHNPNSDVGILYNGKGHVSLS 154

Query: 126 LKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKH----PKEIEDILKDE--KIQLPLSLL 179
           L++Q   I +G +P F   +  +  F L L        PKE+E+ ++++  K+ +  SL 
Sbjct: 155 LRRQE-NIASGAYPTFRQDSHDTTTFGLTLTSSSKAGLPKEVEESVRNDKKKVSVTFSLA 213

Query: 180 INVPVKFKIWLVKSWRMKIVIRCEMTISAFAKV 212
           I+     K+ L++S  MK  + C++ +   AK 
Sbjct: 214 IHALAHMKMGLLRSGTMKFDVTCKVKLDTLAKT 246

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356501342|ref|XP_003519484.1| PREDICTED: uncharacterized protein LOC100789647 [Glycine max]

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 101/217 (46%), Gaps = 26/217 (11%)

Query: 20  YIIQLPINRIH--PRPHNSSNDD-------ANISFTFLLLWVSLLLFIVALILLLIFIIF 70
           Y+I++P ++++  P P N+   D                 W+  +LFI+ + L +   + 
Sbjct: 47  YVIKIPKDQVYRVPPPENARRYDQYTRRKHRRSRCCCCFCWLIGILFILVVFLAIAAGVL 106

Query: 71  LFVVRPKGPKYYIDN-------LIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVS 123
             V RP+ PKY I+N       L   + ++    ++N ++++ NPN  +GI Y  D    
Sbjct: 107 YLVFRPEEPKYSIENIAVRGINLTSPSSTAAMSPVFNVTVKADNPNDKIGIRYLKDSSAE 166

Query: 124 LSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLL---NFKHPKEIEDIL--KDEKIQLPLSL 178
           +  K   +   NG  P FY  +    +F   L     +   E+   L     K ++PL++
Sbjct: 167 VFYKDARLC--NGALPAFYQPSNNVTVFGTALRGDGIELRSEVRRALLEAQTKRRVPLTV 224

Query: 179 LINVPVKFKIWLVKSWRMKIVIRCEMTI---SAFAKV 212
            I  PVK K+  VK+W++ + + C MT+   +A AK+
Sbjct: 225 RIRAPVKIKVGSVKTWKITVKVNCHMTVNELTARAKI 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554299|ref|XP_003545485.1| PREDICTED: uncharacterized protein LOC100800674 isoform 1 [Glycine max] gi|356554301|ref|XP_003545486.1| PREDICTED: uncharacterized protein LOC100800674 isoform 2 [Glycine max]

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 106/217 (48%), Gaps = 26/217 (11%)

Query: 20  YIIQLPINRIH--PRPHNSSNDD-------ANISFTFLLLWVSLLLFIVALILLLIFIIF 70
           Y+I++P ++++  P P N+   D                 W+  +LFI+ ++L +   + 
Sbjct: 47  YVIKIPKDQVYRVPPPENARRYDQYARRKHRRSRCCCCFCWLIGILFILVVLLAIAAGVL 106

Query: 71  LFVVRPKGPKYYIDNLI--PINQSSYYDVI-----YNFSIRSKNPNCHMGIIYQNDGIVS 123
             V RP+ PKY I+N+    IN +S   V      +N ++++ NPN  +GI Y  D    
Sbjct: 107 YLVFRPEAPKYSIENITVRGINLTSPSSVAAISPEFNVTVKADNPNDKIGIRYLKDSSAE 166

Query: 124 LSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFK----HPKEIEDILKDE-KIQLPLSL 178
           +  K   +   NG  P FY  +    +F   L         ++   +L+ + K ++PL++
Sbjct: 167 VFYKDARLC--NGALPAFYQPSNNVTVFGTALRGDGIELRSEDRRALLEAQTKRRVPLTV 224

Query: 179 LINVPVKFKIWLVKSWRMKIVIRCEMTI---SAFAKV 212
            I  PVK K+  +++W++ + + C++T+   +A AK+
Sbjct: 225 RIRAPVKIKVGSIRTWKITVKVNCDVTVNELTAQAKI 261

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297822321|ref|XP_002879043.1| hypothetical protein ARALYDRAFT_481588 [Arabidopsis lyrata subsp. lyrata] gi|297324882|gb|EFH55302.1| hypothetical protein ARALYDRAFT_481588 [Arabidopsis lyrata subsp. lyrata]

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 30/229 (13%)

Query: 6   QNARFQATTSSSQL----------YIIQLPINRIH--PRPHNSS-----NDDANISFTFL 48
           Q+ +F    SS +           Y+IQ+P ++I+  P P N+      +   N   T  
Sbjct: 13  QSGQFSGNFSSGEFPRKPTPPPATYVIQVPKDQIYRIPPPENAHRLQQLSRKKNNRSTCR 72

Query: 49  LLWVSLLLFIVALILL--LIFIIFLFVVRPKGPKYYIDNL----IPINQSSYYDVIYNFS 102
             + S L  I  LI+L  +   I   + RP+ PKY I+      I +N +S     +N +
Sbjct: 73  CCFCSFLAAIFILIVLAGISLAILYLIYRPEAPKYSIEGFTVSGINLNSTSPISPNFNVT 132

Query: 103 IRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKE 162
           +RS+N N  +G+ Y+ +  V +      + + NG  P FY   K   +  L L+    + 
Sbjct: 133 VRSRNGNGKIGVYYEKESSVDVYYND--VDLCNGVMPVFYQPAKNVTVVRLALSGSKIQL 190

Query: 163 IEDILKD-----EKIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTI 206
              + K+      K  LP  L I  PVK K+  VK+W M + + C++T+
Sbjct: 191 TSGMRKEMRNEVSKKTLPFKLKIKAPVKIKVGSVKTWSMIVNVECDVTV 239

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18401317|ref|NP_565634.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|42570933|ref|NP_973540.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|13877665|gb|AAK43910.1|AF370591_1 Unknown protein [Arabidopsis thaliana] gi|3885338|gb|AAC77866.1| expressed protein [Arabidopsis thaliana] gi|15450381|gb|AAK96484.1| At2g27080/T20P8.13 [Arabidopsis thaliana] gi|16974489|gb|AAL31248.1| At2g27080/T20P8.13 [Arabidopsis thaliana] gi|110743895|dbj|BAE99782.1| hypothetical protein [Arabidopsis thaliana] gi|330252839|gb|AEC07933.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana] gi|330252840|gb|AEC07934.1| late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 103/231 (44%), Gaps = 34/231 (14%)

Query: 6   QNARFQATTSSSQL----------YIIQLPINRIH--PRPHNS---------SNDDANIS 44
           Q+ +F    SS +           Y+IQ+P ++I+  P P N+           + +N  
Sbjct: 13  QSGQFSGNFSSGEFPKKPAPPPSTYVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCR 72

Query: 45  FTFLLLWVSLLLFIVALILLLIFIIFLFVVRPKGPKYYIDNL----IPINQSSYYDVIYN 100
             F     ++ + IV  +  + F +   + RP+ PKY I+      I +N +S     +N
Sbjct: 73  CCFCSFLAAVFILIV--LAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFN 130

Query: 101 FSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHP 160
            ++RS+N N  +G+ Y+ +  V +      + I NG  P FY   K   +  L+L+    
Sbjct: 131 VTVRSRNGNGKIGVYYEKESSVDVYYND--VDISNGVMPVFYQPAKNVTVVKLVLSGSKI 188

Query: 161 KEIEDILKD-----EKIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTI 206
           +    + K+      K  +P  L I  PVK K   VK+W M + + C++T+
Sbjct: 189 QLTSGMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTV 239

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297822349|ref|XP_002879057.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297324896|gb|EFH55316.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 101/210 (48%), Gaps = 28/210 (13%)

Query: 19  LYIIQLPINRIH--PRPHN-----------SSNDDANISFTFLLLWVSLLLFIVALILLL 65
           +++IQ+P ++I+  P P N           ++  +    F   L  + +L+ +  + L +
Sbjct: 1   MWVIQVPKDQIYRIPPPENAHRFEQLSRKKTNRSNCRCCFCSFLATIFILIVLAGISLAI 60

Query: 66  IFIIFLFVVRPKGPKYYIDNL----IPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGI 121
           +++I+    RP+ PKY I+      I +N +S     +N ++RS+N N  +G+ Y+ +  
Sbjct: 61  LYLIY----RPEAPKYSIEGFTVSGINLNSTSPISPNFNVTVRSRNGNGKIGVYYEKES- 115

Query: 122 VSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKD-----EKIQLPL 176
            S+ +    + + NG  P FY   K   +  L L+    +    + K+      K  LP 
Sbjct: 116 -SVDVYYNDVDLCNGVMPVFYQPAKNVTVVRLALSGSKIQLTSGMRKEMRNEVSKKTLPF 174

Query: 177 SLLINVPVKFKIWLVKSWRMKIVIRCEMTI 206
            L I  PVK K+  VK+W M + + C++T+
Sbjct: 175 KLKIKAPVKIKVGSVKTWTMIVNVECDVTV 204

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255545676|ref|XP_002513898.1| conserved hypothetical protein [Ricinus communis] gi|223546984|gb|EEF48481.1| conserved hypothetical protein [Ricinus communis]

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 25/210 (11%)

Query: 16  SSQLYIIQLPINRIH--PRPHNS------SNDDANIS------FTFLLLWVSLLLFIVAL 61
            S  Y++Q+P ++I+  P P N+       N            F    L V+  +  +AL
Sbjct: 32  ESGTYVVQVPKDQIYRVPPPENALIVERHRNPQQKKRTRYCSFFCCCFLIVATAVIAIAL 91

Query: 62  ILLLIFIIFLFVVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGI 121
            + L F  F    + K P++ +   I  N +S++   Y+ +++ +NPN    I+Y   G+
Sbjct: 92  GIGLSFAFF----KSKNPEFRVQRFIVKNNTSHHYPDYDITLKVRNPNDKSDILYMQGGV 147

Query: 122 VSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLIN 181
            SL  K Q +A   GKFP F+   K S    ++L  +  K  +      K+ +  SL I 
Sbjct: 148 ASLLYKDQKMAA--GKFPTFHQDNKNSTYIGIVLKGQSIKGAK-----PKMHVSFSLKIG 200

Query: 182 VPVKFKIWLVKSWRMKIVIRCEMTISAFAK 211
           +P K K     S  +KIV++CE  +   AK
Sbjct: 201 IPAKMKTSSFISGEVKIVVKCEFMVDTLAK 230

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510197|ref|XP_003523826.1| PREDICTED: uncharacterized protein LOC100790243 [Glycine max]

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 22/211 (10%)

Query: 20  YIIQLPINRIH--PRPHNSSNDD---------ANISFTFLLLWVSLLLFIVALILLLIFI 68
           Y++Q+P ++++  P P N+   +         A  S   L   +  ++F V LILL   +
Sbjct: 36  YVVQVPKDQVYRVPPPENARIAESHKKAPPKAAKTSRCCLFCVLFFIIFFVLLILLGAVL 95

Query: 69  IFLF--VVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSL 126
             LF  ++ PK P++ I     +    +    Y+ ++   N N  +G+ Y+N G VSLSL
Sbjct: 96  GGLFSMLLTPKDPQFSITRFKVVETKPHPK--YDVTLEVHNLNSDVGVSYKNKGHVSLSL 153

Query: 127 KQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKH---PKEIEDILKDE--KIQLPLSLLIN 181
           ++Q +A  +G +P F         F + L       PKE+E+ + ++  K+ +  SL I+
Sbjct: 154 RRQEVA--SGAYPSFNQDAHDRTTFGVTLTSSKVGLPKEVEESVTNDKKKVNVTFSLAIH 211

Query: 182 VPVKFKIWLVKSWRMKIVIRCEMTISAFAKV 212
              + K+ L++S  MK  + C + +   AK 
Sbjct: 212 ALARMKMGLLRSGTMKFDVTCNVKLDTLAKT 242

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388501634|gb|AFK38883.1| unknown [Medicago truncatula]

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 108/221 (48%), Gaps = 32/221 (14%)

Query: 20  YIIQLPINRIH--PRPHNSSNDDANISFTFLLL--------WVSLLLFIVALILLLIFII 69
           Y+IQLP ++ +  P P N+    AN +              W   +LF + +++ +   +
Sbjct: 29  YVIQLPKDQTYRIPPPENAQRY-ANYTRRKSRRCGCCCCLCWFIGILFTLIVLMAIAAGV 87

Query: 70  FLFVVRPKGPKYYIDNL----IPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLS 125
           F  +VRP+ PKY ID +    + +   S     ++ S+++ N N  +GI Y++D  V + 
Sbjct: 88  FYLIVRPEAPKYAIDRVSVKGMNLTSLSTISPEFDVSVKADNGNKKIGIYYESDSSVEMF 147

Query: 126 LKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDE--------KIQLPLS 177
            +   +++  G  P FY  +    +F  +L       IE +  D+        K  +PL+
Sbjct: 148 YRG--VSLCKGVLPAFYQPSNNVTVFQTVLKGNG---IELVRSDQRALVNAVTKGSVPLT 202

Query: 178 LLINVPVKFKIWLV-KSWRMKIVIRCEMTI---SAFAKVQD 214
           L +  PVK ++  V K+W++++ + C++T+   +A AK+ D
Sbjct: 203 LKLRAPVKIRVGSVKKTWKVRVKVDCDLTVDQLTAQAKIVD 243

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	237
TAIR|locus:2059274	260	AT2G27080 "AT2G27080" [Arabido	0.548	0.5	0.290	1e-14
TAIR|locus:2167489	248	NHL25 "AT5G36970" [Arabidopsis	0.565	0.540	0.275	3.1e-12
TAIR|locus:2018531	252	AT1G65690 "AT1G65690" [Arabido	0.616	0.579	0.253	1.5e-11
TAIR|locus:2178993	281	AT5G21130 "AT5G21130" [Arabido	0.540	0.455	0.251	9.8e-07
TAIR|locus:2098363	240	NHL2 "AT3G11650" [Arabidopsis	0.523	0.516	0.269	2.6e-06
TAIR|locus:2085735	222	AT3G20610 "AT3G20610" [Arabido	0.540	0.576	0.270	4.7e-06
TAIR|locus:2020163	239	AT1G54540 "AT1G54540" [Arabido	0.561	0.556	0.230	1.1e-05
TAIR|locus:2164305	231	NHL3 "AT5G06320" [Arabidopsis	0.582	0.597	0.256	0.00023
TAIR|locus:2060400	291	AT2G22180 "AT2G22180" [Arabido	0.578	0.470	0.225	0.00041
TAIR|locus:2085715	255	AT3G20590 "AT3G20590" [Arabido	0.556	0.517	0.256	0.0007

TAIR|locus:2059274 AT2G27080 "AT2G27080" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
 Identities = 41/141 (29%), Positives = 68/141 (48%)

Query:    75 RPKGPKYYIDNL----IPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQV 130
             RP+ PKY I+      I +N +S     +N ++RS+N N  +G+ Y+ +  V +      
Sbjct:   101 RPEAPKYSIEGFSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYYND-- 158

Query:   131 IAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKD-----EKIQLPLSLLINVPVK 185
             + I NG  P FY   K   +  L+L+    +    + K+      K  +P  L I  PVK
Sbjct:   159 VDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTSGMRKEMRNEVSKKTVPFKLKIKAPVK 218

Query:   186 FKIWLVKSWRMKIVIRCEMTI 206
              K   VK+W M + + C++T+
Sbjct:   219 IKFGSVKTWTMIVNVDCDVTV 239

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2167489 NHL25 "AT5G36970" [Arabidopsis thaliana (taxid:3702)]

 Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
 Identities = 40/145 (27%), Positives = 76/145 (52%)

Query:    75 RPKGPKYYIDNL----IPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQV 130
             RPK P Y ID L      +NQ       +N +I +KNPN  +GI Y++   +S+   Q  
Sbjct:    88 RPKFPDYNIDRLQLTRFQLNQDLSLSTAFNVTITAKNPNEKIGIYYEDGSKISVLYMQT- 146

Query:   131 IAIGNGKFPKFYHGTKKSMLFNL-LLNF-KHPKEIEDILKDEKI---QLPLSLLINVPVK 185
               I NG  PKFY G + + +  + +  F ++   +   L++++     +PL + +  PV+
Sbjct:   147 -RISNGSLPKFYQGHENTTIILVEMTGFTQNATSLMTTLQEQQRLTGSIPLRIRVTQPVR 205

Query:   186 FKIWLVKSWRMKIVIRCEMTISAFA 210
              K+  +K  +++ ++RC +++ + A
Sbjct:   206 IKLGKLKLMKVRFLVRCGVSVDSLA 230

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0009814 "defense response, incompatible interaction" evidence=IEP

GO:0009863 "salicylic acid mediated signaling pathway" evidence=IEP

TAIR|locus:2018531 AT1G65690 "AT1G65690" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 41/162 (25%), Positives = 84/162 (51%)

Query:    75 RPKGPKYYIDNL----IPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQV 130
             +PK P Y ID L      +NQ S     +N +I +KNPN  +GI Y++   +++   +  
Sbjct:    92 KPKLPDYSIDRLQLTRFALNQDSSLTTAFNVTITAKNPNEKIGIYYEDGSKITVWYMEHQ 151

Query:   131 IAIGNGKFPKFYHGTKKSMLFNLLLN--FKHPKEIEDILKDEKIQ---LPLSLLINVPVK 185
             ++  NG  PKFY G + + +  + +    ++   +   L++++ +   +PL + +N PV+
Sbjct:   152 LS--NGSLPKFYQGHENTTVIYVEMTGQTQNASGLRTTLEEQQQRTGNIPLRIRVNQPVR 209

Query:   186 FKIWLVKSWRMKIVIRCEMTISAFA-----KVQDTFIEFLRR 222
              K   +K + ++ ++RC + + + A     K+Q +  +F  R
Sbjct:   210 VKFGKLKLFEVRFLVRCGVFVDSLATNNVIKIQSSSCKFRLR 251

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006865 "amino acid transport" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

TAIR|locus:2178993 AT5G21130 "AT5G21130" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
 Identities = 36/143 (25%), Positives = 65/143 (45%)

Query:    75 RPKGPKYYIDNL----IPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQV 130
             +P  P++ +  +    I +  SS +  +    +RS+N    +G+IY+      +      
Sbjct:   122 QPHKPQFSVSGVSVTGINLTSSSPFSPVIRIKLRSQNVKGKLGLIYEKGNEADVFFNGT- 180

Query:   131 IAIGNGKFPKFYHGTKK-SMLFNLL------LNFKHPKEIEDILKDEKIQLPLSLLINVP 183
               +GNG+F  F       +++  +L      L     KE+ +  K  K+  P  L I  P
Sbjct:   181 -KLGNGEFTAFKQPAGNVTVIVTVLKGSSVKLKSSSRKELTESQKKGKV--PFGLRIKAP 237

Query:   184 VKFKIWLVKSWRMKIVIRCEMTI 206
             VKFK+  V +W M I + C++T+
Sbjct:   238 VKFKVGSVTTWTMTITVDCKITV 260

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2098363 NHL2 "AT3G11650" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 2.6e-06, P = 2.6e-06
 Identities = 38/141 (26%), Positives = 67/141 (47%)

Query:    75 RPKGPKYYI-D-NL----IPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQ 128
             RP   K+Y+ D NL       N + +Y +  NF+IR  NPN  +G+ Y    +      Q
Sbjct:    78 RPNAVKFYVADANLNRFSFDPNNNLHYSLDLNFTIR--NPNQRVGVYYDEFSVSGYYGDQ 135

Query:   129 QVIAIGNGKFPKFYHGTKKSMLFNLLLNFKHPKEI-----EDILKDEKIQL-PLSLLINV 182
             +    G+     FY G K + +    +  ++   +      D+  DEK  +  ++  + +
Sbjct:   136 R---FGSANVSSFYQGHKNTTVILTKIEGQNLVVLGDGARTDLKDDEKSGIYRINAKLRL 192

Query:   183 PVKFKIWLVKSWRMKIVIRCE 203
              V+FK W +KSW++K  I+C+
Sbjct:   193 SVRFKFWFIKSWKLKPKIKCD 213

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=IDA

GO:0051607 "defense response to virus" evidence=IEP

GO:0009506 "plasmodesma" evidence=IDA

TAIR|locus:2085735 AT3G20610 "AT3G20610" [Arabidopsis thaliana (taxid:3702)]

 Score = 123 (48.4 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 36/133 (27%), Positives = 61/133 (45%)

Query:    87 IP-INQS--SYYDVIYNFSIRSKNPNCHMGIIYQNDGI-VSLSLKQQVIAIGNGKFPKFY 142
             IP +N+S  S  +   NF +R KN N   GI Y++  +  S  +    + + N   P+FY
Sbjct:    50 IPALNKSLISSDNTTLNFMVRLKNINAKQGIYYEDLHLSFSTRINNSSLLVANYTVPRFY 109

Query:   143 HG-TKKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLINVPVKFKIWLVKSWRMKIVIR 201
              G  KK+  +   L F +   I+ +L +      + L + V  K   W  K +++K  + 
Sbjct:   110 QGHEKKAKKWGQALPFNNQTVIQAVLPNGSAIFRVDLKMQVKYKVMSWKTKRYKLKASVN 169

Query:   202 CEMTISAFAKVQD 214
              E+      KV+D
Sbjct:   170 LEVNEDGATKVKD 182

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2020163 AT1G54540 "AT1G54540" [Arabidopsis thaliana (taxid:3702)]

 Score = 121 (47.7 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 33/143 (23%), Positives = 69/143 (48%)

Query:    76 PKGPKYYIDNL----IPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVI 131
             PK P Y +++L    + IN        +   I ++NPN  +GI Y+  G + +   +  +
Sbjct:    81 PKLPSYEVNSLRVTNLGINLDLSLSAEFKVEITARNPNEKIGIYYEKGGHIGVWYDKTKL 140

Query:   132 AIGNGKFPKFYHGTKKSMLFNLLLNFK--HPKEIEDILKDEKI--QLPLSLLINVPVKFK 187
                 G  P+FY G +     N+ L  +  +   +   L+ ++   ++PL L +N PV  K
Sbjct:   141 C--EGPIPRFYQGHRNVTKLNVALTGRAQYGNTVLAALQQQQQTGRVPLDLKVNAPVAIK 198

Query:   188 IWLVKSWRMKIVIRCEMTISAFA 210
             +  +K  +++I+  C++ + + +
Sbjct:   199 LGNLKMKKIRILGSCKLVVDSLS 221

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2164305 NHL3 "AT5G06320" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 0.00023, P = 0.00023
 Identities = 40/156 (25%), Positives = 69/156 (44%)

Query:    75 RPKGPKYYIDN-------LIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLK 127
             RP   K+++ +       L P N   Y ++  NF+IR  NPN  +G+ Y    +      
Sbjct:    71 RPNAIKFHVTDAKLTEFTLDPTNNLRY-NLDLNFTIR--NPNRRIGVYYDEIEVRGYYGD 127

Query:   128 QQVIAIGNGKFPKFYHGTKKSM-----LFNLLLNFKHPKEIEDILKDEKIQL-PLSLLIN 181
             Q+   + N    KFY G K +      L    L      E +D+ +D   Q+  +   + 
Sbjct:   128 QR-FGMSNN-ISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDVNSQIYRIDAKLR 185

Query:   182 VPVKFKIWLVKSWRMKIVIRCEMTISAFAKVQDTFI 217
             + ++FK  L+KSWR K  I+C++ +   +     F+
Sbjct:   186 LKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFV 221

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0009617 "response to bacterium" evidence=IEP

GO:0005886 "plasma membrane" evidence=IDA

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0051607 "defense response to virus" evidence=IEP

GO:0005774 "vacuolar membrane" evidence=IDA

GO:0009506 "plasmodesma" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

TAIR|locus:2060400 AT2G22180 "AT2G22180" [Arabidopsis thaliana (taxid:3702)]

 Score = 110 (43.8 bits), Expect = 0.00041, P = 0.00041
 Identities = 35/155 (22%), Positives = 78/155 (50%)

Query:    76 PKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIY--QNDGIVSLSLKQQVIAI 133
             P  P + ++ L  +N S++       ++R++NP  +MG+ Y  + +G+VSL+ K +  ++
Sbjct:   147 PTLPVFAVERLT-VNPSNF-----EVTLRAENPTSNMGVRYMMEKNGVVSLTYKNK--SL 198

Query:   134 GNGKFPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLINVPVK--FKIWLV 191
             G+GKFP        S   N+ LN      +   ++    + P+ L++N+ +K  ++   V
Sbjct:   199 GSGKFPGLSQAASGSDKVNVKLNGSTKNAV---VQPRGSKQPVVLMLNMELKAEYEAGPV 255

Query:   192 KSWRMKIVIRCEMTISAFAKVQDTFIEFLRRHVDS 226
             K    ++V+ C++ +      +   +E +  + +S
Sbjct:   256 KR-NKEVVVTCDVKVKGLLDAKK--VEIVSENCES 287

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0009827 "plant-type cell wall modification" evidence=RCA

GO:0009860 "pollen tube growth" evidence=RCA

TAIR|locus:2085715 AT3G20590 "AT3G20590" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 0.00070, P = 0.00070
 Identities = 37/144 (25%), Positives = 60/144 (41%)

Query:    75 RPKGPKYYIDNL-IPI---NQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLK--- 127
             R K PK  I N  IP    N SS  +   NF +R  NPN   GI Y +  +   ++    
Sbjct:    37 RAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDNPNKDKGIYYDDVHLTFSTINTTT 96

Query:   128 ---QQVIAIGNGKFPKFYHG-TKKSMLFNLLLNFKHPKEIEDILKDEKIQLPLSLLINVP 183
                  ++ + N   PKFY G  KK+  +  +    +   +  +L +      L L  +V 
Sbjct:    97 TNSSDLVLVANYTVPKFYQGHKKKAKKWGQVWPLNNQTVLRAVLPNGSAVFRLDLKTHVR 156

Query:   184 VKFKIWLVKSWRMKIVIRCEMTIS 207
              K   W  K W  +I +  ++ ++
Sbjct:   157 FKIVFWKTK-WYRRIKVGADVEVN 179


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.139   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      237       209   0.00079  112 3  11 22  0.43    32
                                                     31  0.48    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  595 (63 KB)
  Total size of DFA:  173 KB (2101 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.37u 0.13s 17.50t   Elapsed:  00:00:01
  Total cpu time:  17.37u 0.13s 17.50t   Elapsed:  00:00:01
  Start:  Fri May 10 00:09:48 2013   End:  Fri May 10 00:09:49 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005886 "plasma membrane" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	237
PLN03160	219	uncharacterized protein; Provisional	100.0
PF03168	101	LEA_2: Late embryogenesis abundant protein; InterP	99.31
smart00769	100	WHy Water Stress and Hypersensitive response.	98.23
COG5608	161	LEA14-like dessication related protein [Defense me	97.38
PF12751	387	Vac7: Vacuolar segregation subunit 7; InterPro: IP	97.14
PF07092	238	DUF1356: Protein of unknown function (DUF1356); In	97.09
PLN03160	219	uncharacterized protein; Provisional	96.68

>PLN03160 uncharacterized protein; Provisional

Probab=100.00  E-value=5.3e-34  Score=245.55  Aligned_cols=172  Identities=14%  Similarity=0.178  Sum_probs=140.2

Q ss_pred             CCcchhHHHHHHHHHHHHHHHHHHHHHHhhheeeecCCcEEEEeeEEE--EecCC------ceeEEEEEEEEEeCCCcee
Q 046793           41 ANISFTFLLLWVSLLLFIVALILLLIFIIFLFVVRPKGPKYYIDNLIP--INQSS------YYDVIYNFSIRSKNPNCHM  112 (237)
Q Consensus        41 ~~~cc~~c~~~~~~~ll~lill~gi~~~i~~lv~rP~~P~f~V~s~~v--~nlss------~ls~~~~ltl~a~NPN~k~  112 (237)
                      |++||+ ||+|++++++   ++++++++++|++||||+|+|+|+++++  |++++      .++.+++++++++|||. +
T Consensus        33 r~~~~~-c~~~~~a~~l---~l~~v~~~l~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN~-~  107 (219)
T PLN03160         33 RRNCIK-CCGCITATLL---ILATTILVLVFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPNV-A  107 (219)
T ss_pred             cccceE-EHHHHHHHHH---HHHHHHHheeeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCCc-e
Confidence            344444 5555544333   3355677788999999999999999999  87642      46777888889999998 8


Q ss_pred             eEEEeCcEEEEEEeCCeEEeeccCCCCceeecCCCeEEEEEEEEEe---cChhhHHHHhcC--CceEEEEEEEEEEEEEE
Q 046793          113 GIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSMLFNLLLNFK---HPKEIEDILKDE--KIQLPLSLLINVPVKFK  187 (237)
Q Consensus       113 ~i~Y~~~~v~v~~Y~g~~Lg~~~~~vP~F~q~~kntt~v~~~l~g~---l~~~~~~~L~~~--~g~V~l~v~~~~~vr~k  187 (237)
                      +|+|++++++++ |+|+.+|  ++.+|+|+|++++++.+++++...   +..  ..+|.+|  +|.++|++.++.++|++
T Consensus       108 ~~~Y~~~~~~v~-Y~g~~vG--~a~~p~g~~~ar~T~~l~~tv~~~~~~~~~--~~~L~~D~~~G~v~l~~~~~v~gkVk  182 (219)
T PLN03160        108 SFKYSNTTTTIY-YGGTVVG--EARTPPGKAKARRTMRMNVTVDIIPDKILS--VPGLLTDISSGLLNMNSYTRIGGKVK  182 (219)
T ss_pred             eEEEcCeEEEEE-ECCEEEE--EEEcCCcccCCCCeEEEEEEEEEEeceecc--chhHHHHhhCCeEEEEEEEEEEEEEE
Confidence            999999999999 9999999  999999999999999999887654   222  2457777  79999999999999999


Q ss_pred             EEEEEEeeEEEEEEEEEEEeccccccccccccceeeech
Q 046793          188 IWLVKSWRMKIVIRCEMTISAFAKVQDTFIEFLRRHVDS  226 (237)
Q Consensus       188 vg~~~s~~~~v~V~C~l~V~~~~~~~~~~~~~~~C~v~~  226 (237)
                      +|.++++++.++++|++.|+..+   ..++. ++|+.+.
T Consensus       183 v~~i~k~~v~~~v~C~v~V~~~~---~~i~~-~~C~~~~  217 (219)
T PLN03160        183 ILKIIKKHVVVKMNCTMTVNITS---QAIQG-QKCKRHV  217 (219)
T ss_pred             EEEEEEEEEEEEEEeEEEEECCC---CEEec-cEecccc
Confidence            99999999999999999997732   35666 7999874

>PF03168 LEA_2: Late embryogenesis abundant protein; InterPro: IPR004864 Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress [, ]

Probab=99.31  E-value=7.9e-12  Score=93.51  Aligned_cols=97  Identities=20%  Similarity=0.343  Sum_probs=67.8

Q ss_pred             EEEEeCCCceeeEEEeCcEEEEEEeCCeEEeeccCC-CCceeecCCCeEEEEEEEEEecChhhHHHHhcC-CceEEEEEE
Q 046793          102 SIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGK-FPKFYHGTKKSMLFNLLLNFKHPKEIEDILKDE-KIQLPLSLL  179 (237)
Q Consensus       102 tl~a~NPN~k~~i~Y~~~~v~v~~Y~g~~Lg~~~~~-vP~F~q~~kntt~v~~~l~g~l~~~~~~~L~~~-~g~V~l~v~  179 (237)
                      +|+++|||. ++++|++.+++++ |+|..+|  .+. .++|+|++++++.+.+.+..+ ..+..+.+.++ ++..++++.
T Consensus         1 ~l~v~NPN~-~~i~~~~~~~~v~-~~g~~v~--~~~~~~~~~i~~~~~~~v~~~v~~~-~~~l~~~l~~~~~~~~~~~v~   75 (101)
T PF03168_consen    1 TLSVRNPNS-FGIRYDSIEYDVY-YNGQRVG--TGGSLPPFTIPARSSTTVPVPVSVD-YSDLPRLLKDLLAGRVPFDVT   75 (101)
T ss_dssp             EEEEEESSS-S-EEEEEEEEEEE-ESSSEEE--EEEECE-EEESSSCEEEEEEEEEEE-HHHHHHHHHHHHHTTSCEEEE
T ss_pred             CEEEECCCc-eeEEEeCEEEEEE-ECCEEEE--CccccCCeEECCCCcEEEEEEEEEc-HHHHHHHHHhhhccccceEEE
Confidence            689999998 9999999999999 9999999  664 899999999999998887766 11113333333 355677777


Q ss_pred             EEEEEEEEE-EEEEEeeEEEEEEEE
Q 046793          180 INVPVKFKI-WLVKSWRMKIVIRCE  203 (237)
Q Consensus       180 ~~~~vr~kv-g~~~s~~~~v~V~C~  203 (237)
                      +++++++++ +.....+..+.++|+
T Consensus        76 ~~~~g~~~v~~~~~~~~~~v~~~~~  100 (101)
T PF03168_consen   76 YRIRGTFKVLGTPIFGSVRVPVSCE  100 (101)
T ss_dssp             EEEEEEEE-EE-TTTSCEEEEEEEE
T ss_pred             EEEEEEEEEcccceeeeEEEeEEeE
Confidence            777788884 433323344444443

The function of these proteins is unknown. ; PDB: 3BUT_A 1XO8_A 1YYC_A.

>smart00769 WHy Water Stress and Hypersensitive response

Probab=98.23  E-value=1.6e-05  Score=60.08  Aligned_cols=83  Identities=11%  Similarity=0.111  Sum_probs=63.6

Q ss_pred             ceeEEEEEEEEEeCCCceeeEEEeCcEEEEEEeCCeEEeeccCCCC-ceeecCCCeEEEEEEEEEe--cChhhHHHHhcC
Q 046793           94 YYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFP-KFYHGTKKSMLFNLLLNFK--HPKEIEDILKDE  170 (237)
Q Consensus        94 ~ls~~~~ltl~a~NPN~k~~i~Y~~~~v~v~~Y~g~~Lg~~~~~vP-~F~q~~kntt~v~~~l~g~--l~~~~~~~L~~~  170 (237)
                      ..+.++.++++++|||. ..+.|++.+..++ |+|..+|  +|..+ +...++++++.+.+.++-+  ........|.+ 
T Consensus        12 ~~~~~~~l~l~v~NPN~-~~l~~~~~~y~l~-~~g~~v~--~g~~~~~~~ipa~~~~~v~v~~~~~~~~~~~~~~~l~~-   86 (100)
T smart00769       12 GLEIEIVLKVKVQNPNP-FPIPVNGLSYDLY-LNGVELG--SGEIPDSGTLPGNGRTVLDVPVTVNLFLAEALIWHIAN-   86 (100)
T ss_pred             ceEEEEEEEEEEECCCC-CccccccEEEEEE-ECCEEEE--EEEcCCCcEECCCCcEEEEEEEEeehhHhHHHHHhhcc-
Confidence            46789999999999996 7999999999999 9999999  99986 7899999999988877665  23333344432 


Q ss_pred             CceEEEEEEEE
Q 046793          171 KIQLPLSLLIN  181 (237)
Q Consensus       171 ~g~V~l~v~~~  181 (237)
                      +..++++++.+
T Consensus        87 ~~~~~y~l~g~   97 (100)
T smart00769       87 GEEIPYRLDGK   97 (100)
T ss_pred             CCCccEEEEEE
Confidence            22455554443

>COG5608 LEA14-like dessication related protein [Defense mechanisms]

Probab=97.38  E-value=0.011  Score=48.08  Aligned_cols=100  Identities=9%  Similarity=-0.029  Sum_probs=71.1

Q ss_pred             CCcEEEEeeEEEEecCCceeEEEEEEEEEeCCCceeeEEEeCcEEEEEEeCCeEEeeccCCC-CceeecCCCeEEEEEEE
Q 046793           77 KGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKF-PKFYHGTKKSMLFNLLL  155 (237)
Q Consensus        77 ~~P~f~V~s~~v~nlss~ls~~~~ltl~a~NPN~k~~i~Y~~~~v~v~~Y~g~~Lg~~~~~v-P~F~q~~kntt~v~~~l  155 (237)
                      ++|...--.+..-.+ +....++-.++.++|||. ..+--.+.+.+++ -+|..+|  +|.. .++..++++..++++.+
T Consensus        31 ~~p~ve~~ka~wGkv-t~s~~EiV~t~KiyNPN~-fPipVtgl~y~vy-mN~Iki~--eG~~~k~~~v~p~S~~tvdv~l  105 (161)
T COG5608          31 KKPGVESMKAKWGKV-TNSETEIVGTLKIYNPNP-FPIPVTGLQYAVY-MNDIKIG--EGEILKGTTVPPNSRETVDVPL  105 (161)
T ss_pred             CCCCceEEEEEEEEE-eccceEEEEEEEecCCCC-cceeeeceEEEEE-EcceEee--ccccccceEECCCCeEEEEEEE
Confidence            456555444443111 124568888999999997 7999999999999 9999999  9985 56899999999999888


Q ss_pred             EEe---cChhhHHHHhcC-CceEEEEEEEE
Q 046793          156 NFK---HPKEIEDILKDE-KIQLPLSLLIN  181 (237)
Q Consensus       156 ~g~---l~~~~~~~L~~~-~g~V~l~v~~~  181 (237)
                      .-+   +.+.-.+.+++. +..+..++++.
T Consensus       106 ~~d~~~~ke~w~~hi~ngErs~Ir~~i~~~  135 (161)
T COG5608         106 RLDNSKIKEWWVTHIENGERSTIRVRIKGV  135 (161)
T ss_pred             EEehHHHHHHHHHHhhccCcccEEEEEEEE
Confidence            765   445444566654 44455554444

>PF12751 Vac7: Vacuolar segregation subunit 7; InterPro: IPR024260 Vac7 is localised at the vacuole membrane, a location which is consistent with its involvement in vacuole morphology and inheritance []

Probab=97.14  E-value=0.0033  Score=58.23  Aligned_cols=87  Identities=11%  Similarity=0.181  Sum_probs=49.8

Q ss_pred             CCCcchhHHHHHHHHHHHHHHHHHHHHHHhhheeeecCCcEEEEeeEEEEecCCceeEEEEEEEEEeCCCceeeEEEeCc
Q 046793           40 DANISFTFLLLWVSLLLFIVALILLLIFIIFLFVVRPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQND  119 (237)
Q Consensus        40 ~~~~cc~~c~~~~~~~ll~lill~gi~~~i~~lv~rP~~P~f~V~s~~v~nlss~ls~~~~ltl~a~NPN~k~~i~Y~~~  119 (237)
                      +|++|.++++|.++. +++|+++.+++.+++ -.-+| .-.+.|.++. --+.+.--.-|+++|.|.|||- +.|.-++.
T Consensus       295 ~r~~~~r~~~c~~~~-i~~lL~ig~~~gFv~-AttKp-L~~v~v~~I~-NVlaS~qELmfdl~V~A~NPn~-~~V~I~d~  369 (387)
T PF12751_consen  295 QRSWFSRFASCIYLS-ILLLLVIGFAIGFVF-ATTKP-LTDVQVVSIQ-NVLASEQELMFDLTVEAFNPNW-FTVTIDDM  369 (387)
T ss_pred             cccHHhhhhHHHHHH-HHHHHHHHHHHHhhh-hcCcc-cccceEEEee-eeeeccceEEEeeEEEEECCCe-EEEEeccc
Confidence            466776654444332 333333333443333 34454 1122222221 1123455678999999999995 89999999


Q ss_pred             EEEEEEeCCeEEe
Q 046793          120 GIVSLSLKQQVIA  132 (237)
Q Consensus       120 ~v~v~~Y~g~~Lg  132 (237)
                      +++++ -+..-+|
T Consensus       370 dldIF-AKS~yvg  381 (387)
T PF12751_consen  370 DLDIF-AKSRYVG  381 (387)
T ss_pred             eeeeE-ecCCccC
Confidence            99999 5554444

Vac7 has been shown to function as an upstream regulator of the Fab1 lipid kinase pathway []. The Fab1 lipid pathway is important for correct regulation of membrane trafficking events.

>PF07092 DUF1356: Protein of unknown function (DUF1356); InterPro: IPR009790 This family consists of several hypothetical mammalian proteins of around 250 residues in length

Probab=97.09  E-value=0.024  Score=49.48  Aligned_cols=79  Identities=18%  Similarity=0.194  Sum_probs=57.3

Q ss_pred             cCCcEEEEeeEE---E-EecCC-ceeEEEEEEEEEeCCCceeeEEEeCcEEEEEEeCCeEEeeccCCCCce-eecCCCeE
Q 046793           76 PKGPKYYIDNLI---P-INQSS-YYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKF-YHGTKKSM  149 (237)
Q Consensus        76 P~~P~f~V~s~~---v-~nlss-~ls~~~~ltl~a~NPN~k~~i~Y~~~~v~v~~Y~g~~Lg~~~~~vP~F-~q~~kntt  149 (237)
                      |+.-.++-.++.   + ||-++ +...++.-++.++|||. ..+.-.+.++.+. |...-+|  .+..... ..++++..
T Consensus        98 PRsV~v~~~gv~s~~V~f~~~~~~v~l~itn~lNIsN~NF-y~V~Vt~~s~qv~-~~~~VVG--~~~~~~~~~I~Prs~~  173 (238)
T PF07092_consen   98 PRSVTVSPVGVKSVTVSFNPDKSTVQLNITNTLNISNPNF-YPVTVTNLSIQVL-YMKTVVG--KGKNSNITVIGPRSSK  173 (238)
T ss_pred             CcEEEEecCcEEEEEEEEeCCCCEEEEEEEEEEEccCCCE-EEEEEEeEEEEEE-EEEeEEe--eeEecceEEecccCCc
Confidence            776665544443   3 55543 67888888999999995 8999999999999 9999999  8876543 45666666


Q ss_pred             EEEEEEEEe
Q 046793          150 LFNLLLNFK  158 (237)
Q Consensus       150 ~v~~~l~g~  158 (237)
                      .+...+...
T Consensus       174 q~~~tV~t~  182 (238)
T PF07092_consen  174 QVNYTVKTT  182 (238)
T ss_pred             eEEEEeeEE
Confidence            665555444

The function of this family is unknown.

>PLN03160 uncharacterized protein; Provisional

Probab=96.68  E-value=0.023  Score=49.13  Aligned_cols=102  Identities=15%  Similarity=0.050  Sum_probs=58.0

Q ss_pred             CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHhhheeeec--CCcEEEEeeEEE---------EecCC-----ceeEE
Q 046793           35 NSSNDDANISFTFLLLWVSLLLFIVALILLLIFIIFLFVVRP--KGPKYYIDNLIP---------INQSS-----YYDVI   98 (237)
Q Consensus        35 ~~r~~~~~~cc~~c~~~~~~~ll~lill~gi~~~i~~lv~rP--~~P~f~V~s~~v---------~nlss-----~ls~~   98 (237)
                      ++|++++.+||+ |++-+++++.++++++   ++.++---.|  +.-.++++++.+         +|++-     .-|+|
T Consensus        30 ~~~r~~~~~c~~-~~~a~~l~l~~v~~~l---~~~vfrPk~P~~~v~~v~l~~~~~~~~~~~~~~~n~tl~~~v~v~NPN  105 (219)
T PLN03160         30 KTRRRNCIKCCG-CITATLLILATTILVL---VFTVFRVKDPVIKMNGVTVTKLELINNTTLRPGTNITLIADVSVKNPN  105 (219)
T ss_pred             ccccccceEEHH-HHHHHHHHHHHHHHhe---eeEEEEccCCeEEEEEEEEeeeeeccCCCCceeEEEEEEEEEEEECCC
Confidence            445678888888 7766666666665533   3333333444  233444443332         34321     23566


Q ss_pred             EEEEEEEeCCCceeeEEEeCcEEEEEEeCCeEEeeccCCCCceeecCCCeEE
Q 046793           99 YNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYHGTKKSML  150 (237)
Q Consensus        99 ~~ltl~a~NPN~k~~i~Y~~~~v~v~~Y~g~~Lg~~~~~vP~F~q~~kntt~  150 (237)
                      . +.+.-+|  ....++|++..+.-     ..+.  .|..|++.+...+.+.
T Consensus       106 ~-~~~~Y~~--~~~~v~Y~g~~vG~-----a~~p--~g~~~ar~T~~l~~tv  147 (219)
T PLN03160        106 V-ASFKYSN--TTTTIYYGGTVVGE-----ARTP--PGKAKARRTMRMNVTV  147 (219)
T ss_pred             c-eeEEEcC--eEEEEEECCEEEEE-----EEcC--CcccCCCCeEEEEEEE
Confidence            6 5666653  45889998754433     3455  6777777777777664

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	237
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 3e-06
 Identities = 40/270 (14%), Positives = 85/270 (31%), Gaps = 69/270 (25%)

Query: 1   SKMISQNARFQATTSSSQLYIIQLPINRIHP---RPHNSS----NDDANISFTFL-LLWV 52
              ++    ++         II+  +N + P   R            A+I    L L+W 
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397

Query: 53  SLLLFIVALILLLIFIIFLFVVRPKGPKYYI-----------DNLIPINQS--SYYDVIY 99
            ++   V +++  +    L   +PK     I           +N   +++S   +Y++  
Sbjct: 398 DVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457

Query: 100 NFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPKFYH-----GTKKSMLF-NL 153
            F      P       Y +              IG       +H       ++  LF  +
Sbjct: 458 TFDSDDLIPPYLDQYFYSH--------------IG-------HHLKNIEHPERMTLFRMV 496

Query: 154 LLNFK--HPKEIEDILKDEKIQLPLSLLINVPVKFKIWLVKSWRMKIVIRCEMTISAFAK 211
            L+F+    K   D          L+ L  +         K ++  I          + +
Sbjct: 497 FLDFRFLEQKIRHDSTAWNASGSILNTLQQL---------KFYKPYICDNDP----KYER 543

Query: 212 VQDTFIEFLRRHVDSCI------ILRMMLF 235
           + +  ++FL +  ++ I      +LR+ L 
Sbjct: 544 LVNAILDFLPKIEENLICSKYTDLLRIALM 573

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	237
1yyc_A	174	LEA protein, putative late embryogenesis abundant	97.96
3but_A	136	Uncharacterized protein AF_0446; lipid binding pro	97.94
1xo8_A	151	AT1G01470; structural genomics, protein structure	97.74

>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}

Probab=97.96  E-value=7e-05  Score=61.38  Aligned_cols=99  Identities=16%  Similarity=0.148  Sum_probs=74.9

Q ss_pred             CCcEEEEeeEEEEecCCceeEEEEEEEEEeCCCceeeEEEeCcEEEEEEeCCeEEeeccCCCCc-eeecCCCeEEEEEEE
Q 046793           77 KGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPK-FYHGTKKSMLFNLLL  155 (237)
Q Consensus        77 ~~P~f~V~s~~v~nlss~ls~~~~ltl~a~NPN~k~~i~Y~~~~v~v~~Y~g~~Lg~~~~~vP~-F~q~~kntt~v~~~l  155 (237)
                      +.|+++++++++-+++ ....+|.+.++++|||. ..+.+.+++.++. -+|..|+  +|..+. +..++++++.+.+.+
T Consensus        43 ~~PeV~v~~v~~~~~~-l~~~~~~l~LrV~NPN~-~pLpi~gi~Y~L~-vnG~~la--sG~s~~~~tIpa~g~~~v~Vpv  117 (174)
T 1yyc_A           43 PTPEATVDDVDFKGVT-RDGVDYHAKVSVKNPYS-QSIPICQISYILK-SATRTIA--SGTIPDPGSLVGSGTTVLDVPV  117 (174)
T ss_dssp             CCCEEEEEEEEEEEEC-SSSEEEEEEEEEEECSS-SCCBCCSEEEEEE-ESSSCEE--EEEESCCCBCCSSEEEEEEEEE
T ss_pred             CCCEEEEEEeEEeccc-cceEEEEEEEEEECCCC-CCccccceEEEEE-ECCEEEE--EEecCCCceECCCCcEEEEEEE
Confidence            6899999999983222 23588999999999997 7999999999999 8999999  999875 778889999998887


Q ss_pred             EEecChhhHHHHhcC---CceEEEEEEEEE
Q 046793          156 NFKHPKEIEDILKDE---KIQLPLSLLINV  182 (237)
Q Consensus       156 ~g~l~~~~~~~L~~~---~g~V~l~v~~~~  182 (237)
                      +..  .....++..+   .+.++.++++..
T Consensus       118 ~v~--~~~l~~~~~~l~~~~~i~Y~L~g~L  145 (174)
T 1yyc_A          118 KVA--YSIAVSLMKDMCTDWDIDYQLDIGL  145 (174)
T ss_dssp             EES--HHHHHHTCCCCCSSEEECEEEEEEE
T ss_pred             EEE--HHHHHHHHHhcCCCCccceEEEEEE
Confidence            654  2222222233   346776666653

>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}

Probab=97.94  E-value=0.00015  Score=57.17  Aligned_cols=80  Identities=8%  Similarity=0.049  Sum_probs=64.3

Q ss_pred             eeEEEEEEEEEeCCCceeeEEEeCcEEEEEEeCCeEEeeccCC-CCceeecCCCeEEEEEEEEEe---cChhhHHHHhcC
Q 046793           95 YDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGK-FPKFYHGTKKSMLFNLLLNFK---HPKEIEDILKDE  170 (237)
Q Consensus        95 ls~~~~ltl~a~NPN~k~~i~Y~~~~v~v~~Y~g~~Lg~~~~~-vP~F~q~~kntt~v~~~l~g~---l~~~~~~~L~~~  170 (237)
                      -...|.+.+++.|||. ..+.++..+.+++ .+|..+|  +|. ...+..++.+.+.+.+.+.-+   +.+...+.++++
T Consensus        16 ~~t~~~~~l~V~NPN~-~~l~i~gl~y~v~-lng~~la--~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~~~~~hi~ng   91 (136)
T 3but_A           16 SQTEIVALAKVRNEDV-VPIVVSGYHYTIE-MNGVKVA--DGYENSPVTVKPASATTLKFSLRLNNSFLREWWVTHIANG   91 (136)
T ss_dssp             SEEEEEEEEEEECCSS-SCEEEEEEEEEEE-ETTEEEE--EEEECCCEEECTTCEEEEEEEEEEEHHHHTTHHHHHHHTT
T ss_pred             cEEEEEEEEEEeCCCC-cceeeeceEEEEE-ECCEEEE--eeeecCceEECCCCcEEEEEEEEEchHHhHHHHHHHhhcC
Confidence            4678999999999996 7999999999999 9999999  997 677889999988888887766   666666666654


Q ss_pred             -CceEEEEE
Q 046793          171 -KIQLPLSL  178 (237)
Q Consensus       171 -~g~V~l~v  178 (237)
                       ++.+.+++
T Consensus        92 e~s~l~i~~  100 (136)
T 3but_A           92 EKTKIRVAI  100 (136)
T ss_dssp             SEEEEEEEE
T ss_pred             CceEEEEEE
Confidence             44444333

>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1

Probab=97.74  E-value=2.8e-05  Score=62.31  Aligned_cols=101  Identities=13%  Similarity=0.067  Sum_probs=73.9

Q ss_pred             CCcEEEEeeEEEEecCCceeEEEEEEEEEeCCCceeeEEEeCcEEEEEEeCCeEEeeccCCCCc-eeecCCCeEEEEEEE
Q 046793           77 KGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPK-FYHGTKKSMLFNLLL  155 (237)
Q Consensus        77 ~~P~f~V~s~~v~nlss~ls~~~~ltl~a~NPN~k~~i~Y~~~~v~v~~Y~g~~Lg~~~~~vP~-F~q~~kntt~v~~~l  155 (237)
                      +.|+++++++++-+++ ....+|.+.++++|||. ..+.+++.+.++. -+|..++  +|..+. +..++++++.+.+.+
T Consensus        20 ~~P~v~v~~v~~~~~~-~~~~~~~~~l~V~NPN~-~~lpi~gi~y~l~-vng~~la--sG~~~~~~~ipa~g~~~v~vpv   94 (151)
T 1xo8_A           20 PKPEGSVTDVDLKDVN-RDSVEYLAKVSVTNPYS-HSIPICEISFTFH-SAGREIG--KGKIPDPGSLKAKDMTALDIPV   94 (151)
T ss_dssp             CSCCCBCSEEEECCCT-TTEECEEEEEEEECSSS-SCCCCEEEEEEEE-SSSSCEE--EEEEEECCCCSSSSEEEEEECC
T ss_pred             CCCEEEEEEeEEeccC-cceeEEEEEEEEECCCC-CCcccccEEEEEE-ECCEEEE--EEecCCCcEECCCCcEEEEEEE
Confidence            6799999999982222 23568999999999997 7999999999999 8999999  998864 778889999888776


Q ss_pred             EEec--ChhhHHHHhcCCceEEEEEEEEEE
Q 046793          156 NFKH--PKEIEDILKDEKIQLPLSLLINVP  183 (237)
Q Consensus       156 ~g~l--~~~~~~~L~~~~g~V~l~v~~~~~  183 (237)
                      +...  -......+.. .+.++.+++++..
T Consensus        95 ~v~~~~l~~~~~~l~~-~~~i~Y~l~g~l~  123 (151)
T 1xo8_A           95 VVPYSILFNLARDVGV-DWDIDYELQIGLT  123 (151)
T ss_dssp             CEEHHHHHHHHHHHHH-HSEEEEEEEEEEE
T ss_pred             EEEHHHHHHHHHhccc-CCcccEEEEEEEE
Confidence            6541  1112223322 3567777666543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	237
d1xo8a_	151	Putative dessication related protein LEA14 {Thale	97.72

>d1xo8a_ b.1.25.1 (A:) Putative dessication related protein LEA14 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: LEA14-like
family: LEA14-like
domain: Putative dessication related protein LEA14
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.72  E-value=1.6e-05  Score=61.78  Aligned_cols=79  Identities=14%  Similarity=0.070  Sum_probs=64.6

Q ss_pred             ecCCcEEEEeeEEEEecCCceeEEEEEEEEEeCCCceeeEEEeCcEEEEEEeCCeEEeeccCCCCc-eeecCCCeEEEEE
Q 046793           75 RPKGPKYYIDNLIPINQSSYYDVIYNFSIRSKNPNCHMGIIYQNDGIVSLSLKQQVIAIGNGKFPK-FYHGTKKSMLFNL  153 (237)
Q Consensus        75 rP~~P~f~V~s~~v~nlss~ls~~~~ltl~a~NPN~k~~i~Y~~~~v~v~~Y~g~~Lg~~~~~vP~-F~q~~kntt~v~~  153 (237)
                      +=+.|+++++++++-+++ ....++.++++++|||. .++..+..+.+++ .+|..+|  +|..+. +..++++++.+.+
T Consensus        18 ~~~kPev~l~~v~i~~v~-~~~~~l~~~l~V~NPN~-~~l~i~~l~y~l~-~~g~~ia--~G~~~~~~~ipa~~~~~v~v   92 (151)
T d1xo8a_          18 AIPKPEGSVTDVDLKDVN-RDSVEYLAKVSVTNPYS-HSIPICEISFTFH-SAGREIG--KGKIPDPGSLKAKDMTALDI   92 (151)
T ss_dssp             CCCSCCCBCSEEEECCCT-TTEECEEEEEEEECSSS-SCCCCEEEEEEEE-SSSSCEE--EEEEEECCCCSSSSEEEEEE
T ss_pred             CCCCCeEEEEEEEeeecc-cceEEEEEEEEEECCCC-CceeeeeEEEEEE-ECCEEEE--eEecCCCcEEcCCCcEEEEE
Confidence            446899999999982222 23577999999999997 7999999999999 9999999  998764 6778899999888


Q ss_pred             EEEEe
Q 046793          154 LLNFK  158 (237)
Q Consensus       154 ~l~g~  158 (237)
                      .++..
T Consensus        93 pv~v~   97 (151)
T d1xo8a_          93 PVVVP   97 (151)
T ss_dssp             CCCEE
T ss_pred             EEEEE
Confidence            77654