Citrus Sinensis ID: 046838
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | ||||||
| 198400349 | 417 | unknown protein [Camellia sinensis] | 0.971 | 0.812 | 0.446 | 7e-75 | |
| 255554202 | 422 | conserved hypothetical protein [Ricinus | 0.945 | 0.781 | 0.459 | 8e-71 | |
| 224072717 | 420 | predicted protein [Populus trichocarpa] | 0.931 | 0.773 | 0.450 | 2e-70 | |
| 147799475 | 439 | hypothetical protein VITISV_031449 [Viti | 0.916 | 0.728 | 0.415 | 1e-58 | |
| 224115876 | 434 | predicted protein [Populus trichocarpa] | 0.942 | 0.758 | 0.412 | 4e-58 | |
| 297802834 | 677 | predicted protein [Arabidopsis lyrata su | 0.939 | 0.484 | 0.377 | 2e-55 | |
| 225430232 | 440 | PREDICTED: UPF0481 protein At3g47200 [Vi | 0.968 | 0.768 | 0.363 | 2e-52 | |
| 15236618 | 680 | uncharacterized protein [Arabidopsis tha | 0.939 | 0.482 | 0.357 | 8e-52 | |
| 359482319 | 442 | PREDICTED: UPF0481 protein At3g47200-lik | 0.911 | 0.719 | 0.363 | 2e-51 | |
| 297740074 | 441 | unnamed protein product [Vitis vinifera] | 0.911 | 0.721 | 0.363 | 3e-51 |
| >gi|198400349|gb|ACH87183.1| unknown protein [Camellia sinensis] | Back alignment and taxonomy information |
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Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 157/352 (44%), Positives = 222/352 (63%), Gaps = 13/352 (3%)
Query: 1 MAREPPNKVLDL-VGEKLHRLTPTCSQFSIFRVPDVLRKLNEKAYEPELLAIGPYHHGKD 59
MAR + + + E L + ++F IFR+ + LR+LN+KAY+PE+++IGPYH GK
Sbjct: 1 MARSGGKDFVSMNIYEMLEVFSHPPTEFFIFRLHEELRQLNDKAYDPEIISIGPYHRGKQ 60
Query: 60 NLSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFD 119
NL E HK+ Y +L+++ + D+V A+ +LE A + Y ISL +E ++MM+ D
Sbjct: 61 NLQMMERHKLRYFHSLLQEKNLSPEDFVYAIGSLELHACDFYAEPISLDSDEMIKMMVLD 120
Query: 120 GCFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPN 179
GCFI+E++RKF + LR ++DPIFK+ W+ + RD++L ENQ+PFFVL KLF M E
Sbjct: 121 GCFIIELLRKFDMEFLRDENDPIFKRDWIFNRLQRDLMLFENQIPFFVLCKLFDMIEA-- 178
Query: 180 IPGNESFLVTI-LRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRID 238
PGN L+ + LRF +LPG G R DG E +I HL+ LIH NW PS + ++
Sbjct: 179 -PGNHKRLIYLALRFFSDLLPGTGKREDGKESQ-----GKISHLLGLIHSNWHPSFAGVE 232
Query: 239 AY--GNNGKNNSDWSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGD 296
+N K +W I S E+Q++G+K +K + GSLFDI+FKNGVM+IP L I
Sbjct: 233 PVEDASNKKGKGNWRFIPSTRELQESGVKIEKFEV-TGGSLFDIEFKNGVMQIPPLTIEG 291
Query: 297 ATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDAELLRRRGIIDN 348
TE+ F+NLI YEQ S ++ DY KFL LI+S KD ++L RRGIIDN
Sbjct: 292 RTESFFRNLIAYEQYSPDNQFSYVADYVKFLDFLIDSPKDVKILSRRGIIDN 343
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Source: Camellia sinensis Species: Camellia sinensis Genus: Camellia Family: Theaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255554202|ref|XP_002518141.1| conserved hypothetical protein [Ricinus communis] gi|223542737|gb|EEF44274.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224072717|ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|222841279|gb|EEE78826.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|147799475|emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|224115876|ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|222831965|gb|EEE70442.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297802834|ref|XP_002869301.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297315137|gb|EFH45560.1| predicted protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|225430232|ref|XP_002282564.1| PREDICTED: UPF0481 protein At3g47200 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|15236618|ref|NP_194926.1| uncharacterized protein [Arabidopsis thaliana] gi|2827637|emb|CAA16591.1| putative protein [Arabidopsis thaliana] gi|7270102|emb|CAB79916.1| putative protein [Arabidopsis thaliana] gi|332660585|gb|AEE85985.1| uncharacterized protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|359482319|ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|297740074|emb|CBI30256.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 349 | ||||||
| TAIR|locus:2116667 | 680 | AT4G31980 "AT4G31980" [Arabido | 0.836 | 0.429 | 0.353 | 4e-47 | |
| TAIR|locus:2044918 | 448 | AT2G36430 "AT2G36430" [Arabido | 0.942 | 0.734 | 0.330 | 1.4e-46 | |
| TAIR|locus:2171127 | 440 | AT5G22540 "AT5G22540" [Arabido | 0.922 | 0.731 | 0.351 | 1e-45 | |
| TAIR|locus:2083123 | 509 | AT3G50150 [Arabidopsis thalian | 0.922 | 0.632 | 0.347 | 4.4e-45 | |
| TAIR|locus:2074755 | 541 | AT3G50170 "AT3G50170" [Arabido | 0.919 | 0.593 | 0.337 | 8.1e-44 | |
| TAIR|locus:2083138 | 503 | AT3G50160 "AT3G50160" [Arabido | 0.888 | 0.616 | 0.337 | 9.3e-43 | |
| TAIR|locus:2074760 | 588 | AT3G50180 [Arabidopsis thalian | 0.885 | 0.525 | 0.349 | 8.4e-42 | |
| TAIR|locus:2083093 | 564 | AT3G50130 [Arabidopsis thalian | 0.919 | 0.569 | 0.346 | 1.4e-41 | |
| TAIR|locus:2083108 | 539 | AT3G50140 [Arabidopsis thalian | 0.432 | 0.280 | 0.402 | 1.8e-41 | |
| TAIR|locus:2171132 | 492 | AT5G22550 "AT5G22550" [Arabido | 0.613 | 0.434 | 0.334 | 5.8e-41 |
| TAIR|locus:2116667 AT4G31980 "AT4G31980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 474 (171.9 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
Identities = 111/314 (35%), Positives = 178/314 (56%)
Query: 1 MAREPPNKVLDLVGEKLHRLTPTCSQFSIFRVPDVLRKLNEKAYEPELLAIGPYHHGKDN 60
M + + ++D + KL L+ ++ I++VP+ LR+LN AY P L++ GP H GK+
Sbjct: 267 MNQNEGDALVDSIKAKLAFLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEE 326
Query: 61 LSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFDG 120
L A E+ K YL + I +T D VR E+ AR+CY + L +EFV+M++ DG
Sbjct: 327 LQAMEDQKYRYLLSFIPRTNSSLEDLVRLARTWEQNARSCYAEDVKLHSDEFVEMLVVDG 386
Query: 121 CFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNI 180
F+VE++ + P LRG++D IF M+ + RDMIL+ENQLPFFV+ ++F++
Sbjct: 387 SFLVELLLRSHYPRLRGENDRIFGNSMMITDVCRDMILIENQLPFFVVKEIFLLLLNYYQ 446
Query: 181 PGNESFLVTILR-FIYGILPGKGFRRDGVERVNDYP-INEIKHLVNLIHDNWLPS-PSRI 237
G S + R F Y F + R++D I E +H V+L+ +LP P ++
Sbjct: 447 QGTPSIIQLAQRHFSY-------F----LSRIDDEKFITEPEHFVDLLRSCYLPQFPIKL 495
Query: 238 DAYGNNGKNNSDWSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDA 297
+ Y +N+ ATE+ AG++F+ + L DI F +GV+KIPT+ + D
Sbjct: 496 E-YTTVKVDNAP-----EATELHTAGVRFKPAET--SSCLLDISFADGVLKIPTIVVDDL 547
Query: 298 TETIFQNLIVYEQC 311
TE++++N+I +EQC
Sbjct: 548 TESLYKNIIGFEQC 561
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| TAIR|locus:2044918 AT2G36430 "AT2G36430" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2171127 AT5G22540 "AT5G22540" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2083123 AT3G50150 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2074755 AT3G50170 "AT3G50170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2083138 AT3G50160 "AT3G50160" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2074760 AT3G50180 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2083093 AT3G50130 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2083108 AT3G50140 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2171132 AT5G22550 "AT5G22550" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 349 | |||
| pfam03140 | 387 | pfam03140, DUF247, Plant protein of unknown functi | 1e-101 |
| >gnl|CDD|217385 pfam03140, DUF247, Plant protein of unknown function | Back alignment and domain information |
|---|
Score = 303 bits (777), Expect = e-101
Identities = 128/327 (39%), Positives = 189/327 (57%), Gaps = 21/327 (6%)
Query: 29 IFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTGIPYP--DY 86
I+RVP LR +N +AYEP +++IGPYHHGK +L A EEHK YL +++TG D
Sbjct: 1 IYRVPARLRDVNPEAYEPRVVSIGPYHHGKPHLRAMEEHKWRYLNRFLDRTGRGLSLEDL 60
Query: 87 VRAMWALEERARNCYGGFIS-LGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQ 145
+ A+ LEE AR CY + + EFV+M+L DGCFI+E+ + + G++DP+F +
Sbjct: 61 LAAVRELEEEARACYAEDVDWMSSEEFVEMLLLDGCFILELFLRLS-EGIYGENDPLFAR 119
Query: 146 GWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTILRFIYGILPGKGFRR 205
W+L I RD++LLENQ+PFFVL KLF + S LRF Y
Sbjct: 120 RWLLSLIRRDLLLLENQIPFFVLEKLFELL-TGRQDVKTSLNDLALRFFYDCESL----- 173
Query: 206 DGVERVNDYPINE--IKHLVNLIHDNWLPSPS--RIDAYGNNGKNNSDWSIICSATEIQK 261
D I E + HL++L+ + LPS S A + +I SATE+++
Sbjct: 174 ----LPPDDLIEESNVHHLLDLLRRSLLPSTSPDPTPAAPPRDNGAATPRLIPSATELRE 229
Query: 262 AGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHIL 321
AG++F++ + D+ FK GV++IP L + D TE++ +NLI +EQC HG + H+
Sbjct: 230 AGVRFKRRKTAS--CILDVSFKRGVLEIPRLAVDDGTESLLRNLIAFEQC-HGGSGNHVT 286
Query: 322 DYCKFLHCLINSSKDAELLRRRGIIDN 348
Y F+ LIN+++D LLRR+GI++N
Sbjct: 287 SYVAFMDNLINTAEDVALLRRKGILEN 313
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The function of the plant proteins constituting this family is unknown. Length = 387 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 349 | |||
| PF03140 | 391 | DUF247: Plant protein of unknown function; InterPr | 100.0 |
| >PF03140 DUF247: Plant protein of unknown function; InterPro: IPR004158 The function of the plant proteins constituting this family is unknown | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-89 Score=673.47 Aligned_cols=307 Identities=42% Similarity=0.742 Sum_probs=267.1
Q ss_pred eeecCchhhhcCcCCccceeeeecccCCCCCccchHHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHhccccCCc
Q 046838 29 IFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTG---IPYPDYVRAMWALEERARNCYGGFI 105 (349)
Q Consensus 29 I~rVP~~lr~~~~~aY~P~~VsIGPyHhg~~~L~~mE~~K~~~~~~~l~r~~---~~~~~~~~~i~~~e~~aR~cY~~~~ 105 (349)
|||||+++|++|++||+|++|||||||||+++|+.||++||+|++.|++|++ .++++++++|+++|++||+||++++
T Consensus 1 I~rVP~~lr~~~~~~Y~P~~VsIGPyH~g~~~L~~mE~~K~~~l~~~l~~~~~~~~~l~~~~~~i~~~e~~~R~~Y~~~~ 80 (391)
T PF03140_consen 1 IYRVPESLRDVNPKAYTPQVVSIGPYHHGKPDLQEMEEHKLRYLHRFLKRSGAPAESLEDYVEAIRSLEEEARACYAEDI 80 (391)
T ss_pred CcCCCHHHccCCchhcCCceEEeCCCCCCchhhhhhHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHhcccc
Confidence 8999999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred C-CChHHHHHHHHhhHHHHHHHHHHhcCCCCCCCCCc-ccccCCcchhHhhHHHHhhccchHHHHHHHHHhhcCCCCCCC
Q 046838 106 S-LGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDP-IFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGN 183 (349)
Q Consensus 106 ~-~~~~ef~~MmllDgcFlLe~l~~~~~~~~~~~~d~-~~~~~~~~~~i~~DllLLENQIPffVL~~L~~~~~~~~~~~~ 183 (349)
+ +++++|++||++|||||||+|+.+.. ..+.+|| ++..+|....|.+||+|||||||||||++||++.........
T Consensus 81 ~~~~~~~f~~MmllDgCFlLe~~~~~~~--~~~~~d~~~~~~~~~~~~i~~Dl~LLENQIPffVL~~L~~l~~~~~~~~~ 158 (391)
T PF03140_consen 81 DDMSSDEFVEMMLLDGCFLLEFFLRYSR--SDGENDPGIFSRPWLLSAIRRDLLLLENQIPFFVLEKLFELLFGSKSDVD 158 (391)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhhhh--ccccccccccccccccccchhheeeecccchHHHHHHHHHHhcccccCcc
Confidence 8 99999999999999999999999875 2345778 888899999999999999999999999999999984444566
Q ss_pred chHHHHHHHhhcccCCCCCccCCCCcccCCCCCCcccchhHHHHhhcCCCCCccCccCC-CCCC----CCCcccccCHHH
Q 046838 184 ESFLVTILRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRIDAYGN-NGKN----NSDWSIICSATE 258 (349)
Q Consensus 184 ~~l~~l~~~ff~~~~~~~~~~~~~~~~~~~~~~~~~~HLLdL~~~~~~~p~~~~~~~~~-~~~~----~~~~~~~~sAte 258 (349)
.++.+++.+||....+.. ... ......+++|||||+| .+++|+.....+.. .... ...+..||||||
T Consensus 159 ~~l~~l~~~~~~~~~~~~-----~~~--~~~~~~~~~HlL~L~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~sA~e 230 (391)
T PF03140_consen 159 ESLIDLVLKFFYKHWPSW-----PPD--EPISNPEPHHLLDLLR-MSLLPSPPSSSPTPPRPPRSNGEKPPPKRIRSATE 230 (391)
T ss_pred chHHHHHHhHhccccccc-----ccc--ccccCCCCCChHHHHH-HHhccccCCcccCCCCcccccccccccccCCCHHH
Confidence 789999999994322211 011 1244567899999999 99999322111111 0111 123578999999
Q ss_pred HHhcCcEEEeecCCCCC-ceeeeEEcCceeeeceEEecccchhhhhhHHHHhhhcCCCCCcchhhHHHHHHhhcCChHHH
Q 046838 259 IQKAGIKFQKVDNHRDG-SLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDA 337 (349)
Q Consensus 259 L~~aGVkfk~~~~~~~~-~llDI~F~~G~L~IP~l~id~~T~~llrNLiA~Eq~~~~~~~~~vtsYv~fM~~LI~t~eDV 337 (349)
|++|||+||+ +++. +++||+|++|+|+||+|.||++|+++||||||||||+...+ .+|||||.||++||+|++||
T Consensus 231 L~~aGV~fk~---~~~~~~~lDv~F~~G~L~IP~L~id~~T~~~lrNLiA~Eq~~~~~~-~~vtsY~~fm~~Li~t~~DV 306 (391)
T PF03140_consen 231 LREAGVKFKP---SETDRSLLDVKFKKGVLEIPPLYIDDNTESLLRNLIAFEQCHPPTG-SYVTSYVFFMDSLINTPEDV 306 (391)
T ss_pred HHhCCcEEee---ccCccccccceecCCEEEeCeEEECCcchHHHhHHHHHHHHhccCC-chHhHHHHHHHHHhCcHhhH
Confidence 9999999999 7655 59999999999999999999999999999999999999887 89999999999999999999
Q ss_pred HHHHHCCCccCC
Q 046838 338 ELLRRRGIIDNC 349 (349)
Q Consensus 338 ~lL~~~gIi~n~ 349 (349)
++|+++|||+|+
T Consensus 307 ~lL~~kgIi~~~ 318 (391)
T PF03140_consen 307 ELLRRKGIIVNW 318 (391)
T ss_pred HHHHhCCeEecC
Confidence 999999999986
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Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00