Citrus Sinensis ID: 046838


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MAREPPNKVLDLVGEKLHRLTPTCSQFSIFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTILRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRIDAYGNNGKNNSDWSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDAELLRRRGIIDNC
ccccccHHHHHHHHHHHHHccccccccEEEEcccHHHHcccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccHHHHHHHHHcccccccccccccccccccccHHHHHHHHccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHccEEEEEccccccccccccccccEEEEcEEEEcccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHHHHHHccccccc
cccccHHHHHHHHHHHHHHccccccccEEEEccHHHHHccHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHcccEEEEccccccccEEEEEEcccEEEccEEEEcccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHHHHHHcccEEcc
mareppnkVLDLVGeklhrltptcsqfsifrVPDVLRKLNEkayepellaigpyhhgkdnlsaFEEHKISYLQTLIeqtgipypdYVRAMWALEERARNCyggfislgKNEFVQMMLFDGCFIVEVIRKfglphlrgdddpifkqgwmlphIARDMILLENQLPFFVLWKLFImsempnipgneSFLVTILRFIYGilpgkgfrrdgvervndypinEIKHLVNLIhdnwlpspsridaygnngknnsdwSIICSATEIQKAGIKfqkvdnhrdgslfdikfkngvmkiptleigdATETIFQNLIVYEQcshginpkhiLDYCKFLHCLINSSKDAELLRRRGIIDNC
MAREPPNKVLDLVGEKLhrltptcsqfsifrVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTILRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRIDAYGNNGKNNSDWSIICSATEIQKAGIKFQKVDNHRDGSLfdikfkngvmKIPTLEIGDATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSkdaellrrrgiidnc
MAREPPNKVLDLVGEKLHRLTPTCSQFSIFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTILRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRIDAYGNNGKNNSDWSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDAELLRRRGIIDNC
*********LDLVGEKLHRLTPTCSQFSIFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTILRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRIDAYGNNGKNNSDWSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDAELL*********
***************************SIFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTILRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRIDAYG******SDWSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDAELLRRRGIIDN*
MAREPPNKVLDLVGEKLHRLTPTCSQFSIFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTILRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRIDAYGNNGKNNSDWSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDAELLRRRGIIDNC
*****PNKVLDLVGEKLHRLTPTCSQFSIFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTILRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPS****************WSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDAELLRRRGIIDNC
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MAREPPNKVLDLVGEKLHRLTPTCSQFSIFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTILRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRIDAYGNNGKNNSDWSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDAELLRRRGIIDNC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query349 2.2.26 [Sep-21-2011]
Q9SD53 476 UPF0481 protein At3g47200 no no 0.871 0.638 0.305 9e-34
P0C897 529 Putative UPF0481 protein no no 0.395 0.260 0.298 9e-11
>sp|Q9SD53|Y3720_ARATH UPF0481 protein At3g47200 OS=Arabidopsis thaliana GN=At3g47200 PE=1 SV=1 Back     alignment and function desciption
 Score =  144 bits (363), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 175/337 (51%), Gaps = 33/337 (9%)

Query: 29  IFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQT---GIPYPD 85
           IFRVP+    LN KAY+P++++IGPYH+G+ +L   ++HK   LQ  +++     +    
Sbjct: 48  IFRVPESFVALNPKAYKPKVVSIGPYHYGEKHLQMIQQHKPRLLQLFLDEAKKKDVEENV 107

Query: 86  YVRAMWALEERARNCYGGFISLGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQ 145
            V+A+  LE++ R  Y   +  G ++ + MM+ DGCFI+ V       ++   +DPIF  
Sbjct: 108 LVKAVVDLEDKIRKSYSEELKTG-HDLMFMMVLDGCFILMVFLIMS-GNIELSEDPIFSI 165

Query: 146 GWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTI-LRFIYGILPGKGFR 204
            W+L  I  D++LLENQ+PFFVL  L++ S++    G  S L  I   F    +  +G  
Sbjct: 166 PWLLSSIQSDLLLLENQVPFFVLQTLYVGSKI----GVSSDLNRIAFHFFKNPIDKEG-- 219

Query: 205 RDGVERVNDYPINEIKHLVNLIHDNWLPSPSRIDAYGN--------NGKNNSDWSI---- 252
               E+  +Y   + KHL++LI + +LP+ S  D   +         GK+ +  S+    
Sbjct: 220 -SYWEKHRNY---KAKHLLDLIRETFLPNTSESDKASSPHVQVQLHEGKSGNVPSVDSKA 275

Query: 253 ---ICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYE 309
              I SA  ++  GIKF ++   ++ S+ +++ K   ++IP L       + F N + +E
Sbjct: 276 VPLILSAKRLRLQGIKF-RLRRSKEDSILNVRLKKNKLQIPQLRFDGFISSFFLNCVAFE 334

Query: 310 QCSHGINPKHILDYCKFLHCLINSSKDAELLRRRGII 346
           Q  +  +   I  Y  F+ CL+N+ +D   LR   +I
Sbjct: 335 QF-YTDSSNEITTYIVFMGCLLNNEEDVTFLRNDKLI 370





Arabidopsis thaliana (taxid: 3702)
>sp|P0C897|Y3264_ARATH Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana GN=At3g02645 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
198400349417 unknown protein [Camellia sinensis] 0.971 0.812 0.446 7e-75
255554202422 conserved hypothetical protein [Ricinus 0.945 0.781 0.459 8e-71
224072717420 predicted protein [Populus trichocarpa] 0.931 0.773 0.450 2e-70
147799475439 hypothetical protein VITISV_031449 [Viti 0.916 0.728 0.415 1e-58
224115876434 predicted protein [Populus trichocarpa] 0.942 0.758 0.412 4e-58
297802834 677 predicted protein [Arabidopsis lyrata su 0.939 0.484 0.377 2e-55
225430232440 PREDICTED: UPF0481 protein At3g47200 [Vi 0.968 0.768 0.363 2e-52
15236618 680 uncharacterized protein [Arabidopsis tha 0.939 0.482 0.357 8e-52
359482319442 PREDICTED: UPF0481 protein At3g47200-lik 0.911 0.719 0.363 2e-51
297740074441 unnamed protein product [Vitis vinifera] 0.911 0.721 0.363 3e-51
>gi|198400349|gb|ACH87183.1| unknown protein [Camellia sinensis] Back     alignment and taxonomy information
 Score =  286 bits (733), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 157/352 (44%), Positives = 222/352 (63%), Gaps = 13/352 (3%)

Query: 1   MAREPPNKVLDL-VGEKLHRLTPTCSQFSIFRVPDVLRKLNEKAYEPELLAIGPYHHGKD 59
           MAR      + + + E L   +   ++F IFR+ + LR+LN+KAY+PE+++IGPYH GK 
Sbjct: 1   MARSGGKDFVSMNIYEMLEVFSHPPTEFFIFRLHEELRQLNDKAYDPEIISIGPYHRGKQ 60

Query: 60  NLSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFD 119
           NL   E HK+ Y  +L+++  +   D+V A+ +LE  A + Y   ISL  +E ++MM+ D
Sbjct: 61  NLQMMERHKLRYFHSLLQEKNLSPEDFVYAIGSLELHACDFYAEPISLDSDEMIKMMVLD 120

Query: 120 GCFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPN 179
           GCFI+E++RKF +  LR ++DPIFK+ W+   + RD++L ENQ+PFFVL KLF M E   
Sbjct: 121 GCFIIELLRKFDMEFLRDENDPIFKRDWIFNRLQRDLMLFENQIPFFVLCKLFDMIEA-- 178

Query: 180 IPGNESFLVTI-LRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRID 238
            PGN   L+ + LRF   +LPG G R DG E        +I HL+ LIH NW PS + ++
Sbjct: 179 -PGNHKRLIYLALRFFSDLLPGTGKREDGKESQ-----GKISHLLGLIHSNWHPSFAGVE 232

Query: 239 AY--GNNGKNNSDWSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGD 296
                +N K   +W  I S  E+Q++G+K +K +    GSLFDI+FKNGVM+IP L I  
Sbjct: 233 PVEDASNKKGKGNWRFIPSTRELQESGVKIEKFEV-TGGSLFDIEFKNGVMQIPPLTIEG 291

Query: 297 ATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDAELLRRRGIIDN 348
            TE+ F+NLI YEQ S      ++ DY KFL  LI+S KD ++L RRGIIDN
Sbjct: 292 RTESFFRNLIAYEQYSPDNQFSYVADYVKFLDFLIDSPKDVKILSRRGIIDN 343




Source: Camellia sinensis

Species: Camellia sinensis

Genus: Camellia

Family: Theaceae

Order: Ericales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554202|ref|XP_002518141.1| conserved hypothetical protein [Ricinus communis] gi|223542737|gb|EEF44274.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|224072717|ref|XP_002303847.1| predicted protein [Populus trichocarpa] gi|222841279|gb|EEE78826.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147799475|emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224115876|ref|XP_002332079.1| predicted protein [Populus trichocarpa] gi|222831965|gb|EEE70442.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297802834|ref|XP_002869301.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297315137|gb|EFH45560.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225430232|ref|XP_002282564.1| PREDICTED: UPF0481 protein At3g47200 [Vitis vinifera] Back     alignment and taxonomy information
>gi|15236618|ref|NP_194926.1| uncharacterized protein [Arabidopsis thaliana] gi|2827637|emb|CAA16591.1| putative protein [Arabidopsis thaliana] gi|7270102|emb|CAB79916.1| putative protein [Arabidopsis thaliana] gi|332660585|gb|AEE85985.1| uncharacterized protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359482319|ref|XP_002283339.2| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297740074|emb|CBI30256.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query349
TAIR|locus:2116667680 AT4G31980 "AT4G31980" [Arabido 0.836 0.429 0.353 4e-47
TAIR|locus:2044918448 AT2G36430 "AT2G36430" [Arabido 0.942 0.734 0.330 1.4e-46
TAIR|locus:2171127440 AT5G22540 "AT5G22540" [Arabido 0.922 0.731 0.351 1e-45
TAIR|locus:2083123509 AT3G50150 [Arabidopsis thalian 0.922 0.632 0.347 4.4e-45
TAIR|locus:2074755541 AT3G50170 "AT3G50170" [Arabido 0.919 0.593 0.337 8.1e-44
TAIR|locus:2083138503 AT3G50160 "AT3G50160" [Arabido 0.888 0.616 0.337 9.3e-43
TAIR|locus:2074760588 AT3G50180 [Arabidopsis thalian 0.885 0.525 0.349 8.4e-42
TAIR|locus:2083093564 AT3G50130 [Arabidopsis thalian 0.919 0.569 0.346 1.4e-41
TAIR|locus:2083108 539 AT3G50140 [Arabidopsis thalian 0.432 0.280 0.402 1.8e-41
TAIR|locus:2171132 492 AT5G22550 "AT5G22550" [Arabido 0.613 0.434 0.334 5.8e-41
TAIR|locus:2116667 AT4G31980 "AT4G31980" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 474 (171.9 bits), Expect = 4.0e-47, Sum P(2) = 4.0e-47
 Identities = 111/314 (35%), Positives = 178/314 (56%)

Query:     1 MAREPPNKVLDLVGEKLHRLTPTCSQFSIFRVPDVLRKLNEKAYEPELLAIGPYHHGKDN 60
             M +   + ++D +  KL  L+   ++  I++VP+ LR+LN  AY P L++ GP H GK+ 
Sbjct:   267 MNQNEGDALVDSIKAKLAFLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEE 326

Query:    61 LSAFEEHKISYLQTLIEQTGIPYPDYVRAMWALEERARNCYGGFISLGKNEFVQMMLFDG 120
             L A E+ K  YL + I +T     D VR     E+ AR+CY   + L  +EFV+M++ DG
Sbjct:   327 LQAMEDQKYRYLLSFIPRTNSSLEDLVRLARTWEQNARSCYAEDVKLHSDEFVEMLVVDG 386

Query:   121 CFIVEVIRKFGLPHLRGDDDPIFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNI 180
              F+VE++ +   P LRG++D IF    M+  + RDMIL+ENQLPFFV+ ++F++      
Sbjct:   387 SFLVELLLRSHYPRLRGENDRIFGNSMMITDVCRDMILIENQLPFFVVKEIFLLLLNYYQ 446

Query:   181 PGNESFLVTILR-FIYGILPGKGFRRDGVERVNDYP-INEIKHLVNLIHDNWLPS-PSRI 237
              G  S +    R F Y       F    + R++D   I E +H V+L+   +LP  P ++
Sbjct:   447 QGTPSIIQLAQRHFSY-------F----LSRIDDEKFITEPEHFVDLLRSCYLPQFPIKL 495

Query:   238 DAYGNNGKNNSDWSIICSATEIQKAGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDA 297
             + Y     +N+       ATE+  AG++F+  +      L DI F +GV+KIPT+ + D 
Sbjct:   496 E-YTTVKVDNAP-----EATELHTAGVRFKPAET--SSCLLDISFADGVLKIPTIVVDDL 547

Query:   298 TETIFQNLIVYEQC 311
             TE++++N+I +EQC
Sbjct:   548 TESLYKNIIGFEQC 561


GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=ISM
GO:0008150 "biological_process" evidence=ND
GO:0006865 "amino acid transport" evidence=RCA
TAIR|locus:2044918 AT2G36430 "AT2G36430" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171127 AT5G22540 "AT5G22540" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083123 AT3G50150 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074755 AT3G50170 "AT3G50170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083138 AT3G50160 "AT3G50160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2074760 AT3G50180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083093 AT3G50130 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2083108 AT3G50140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2171132 AT5G22550 "AT5G22550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query349
pfam03140387 pfam03140, DUF247, Plant protein of unknown functi 1e-101
>gnl|CDD|217385 pfam03140, DUF247, Plant protein of unknown function Back     alignment and domain information
 Score =  303 bits (777), Expect = e-101
 Identities = 128/327 (39%), Positives = 189/327 (57%), Gaps = 21/327 (6%)

Query: 29  IFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTGIPYP--DY 86
           I+RVP  LR +N +AYEP +++IGPYHHGK +L A EEHK  YL   +++TG      D 
Sbjct: 1   IYRVPARLRDVNPEAYEPRVVSIGPYHHGKPHLRAMEEHKWRYLNRFLDRTGRGLSLEDL 60

Query: 87  VRAMWALEERARNCYGGFIS-LGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDPIFKQ 145
           + A+  LEE AR CY   +  +   EFV+M+L DGCFI+E+  +     + G++DP+F +
Sbjct: 61  LAAVRELEEEARACYAEDVDWMSSEEFVEMLLLDGCFILELFLRLS-EGIYGENDPLFAR 119

Query: 146 GWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGNESFLVTILRFIYGILPGKGFRR 205
            W+L  I RD++LLENQ+PFFVL KLF +          S     LRF Y          
Sbjct: 120 RWLLSLIRRDLLLLENQIPFFVLEKLFELL-TGRQDVKTSLNDLALRFFYDCESL----- 173

Query: 206 DGVERVNDYPINE--IKHLVNLIHDNWLPSPS--RIDAYGNNGKNNSDWSIICSATEIQK 261
                  D  I E  + HL++L+  + LPS S     A        +   +I SATE+++
Sbjct: 174 ----LPPDDLIEESNVHHLLDLLRRSLLPSTSPDPTPAAPPRDNGAATPRLIPSATELRE 229

Query: 262 AGIKFQKVDNHRDGSLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHIL 321
           AG++F++        + D+ FK GV++IP L + D TE++ +NLI +EQC HG +  H+ 
Sbjct: 230 AGVRFKRRKTAS--CILDVSFKRGVLEIPRLAVDDGTESLLRNLIAFEQC-HGGSGNHVT 286

Query: 322 DYCKFLHCLINSSKDAELLRRRGIIDN 348
            Y  F+  LIN+++D  LLRR+GI++N
Sbjct: 287 SYVAFMDNLINTAEDVALLRRKGILEN 313


The function of the plant proteins constituting this family is unknown. Length = 387

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 349
PF03140391 DUF247: Plant protein of unknown function; InterPr 100.0
>PF03140 DUF247: Plant protein of unknown function; InterPro: IPR004158 The function of the plant proteins constituting this family is unknown Back     alignment and domain information
Probab=100.00  E-value=8.9e-89  Score=673.47  Aligned_cols=307  Identities=42%  Similarity=0.742  Sum_probs=267.1

Q ss_pred             eeecCchhhhcCcCCccceeeeecccCCCCCccchHHHHHHHHHHHHHHhcC---CCHHHHHHHHHHHHHHHhccccCCc
Q 046838           29 IFRVPDVLRKLNEKAYEPELLAIGPYHHGKDNLSAFEEHKISYLQTLIEQTG---IPYPDYVRAMWALEERARNCYGGFI  105 (349)
Q Consensus        29 I~rVP~~lr~~~~~aY~P~~VsIGPyHhg~~~L~~mE~~K~~~~~~~l~r~~---~~~~~~~~~i~~~e~~aR~cY~~~~  105 (349)
                      |||||+++|++|++||+|++|||||||||+++|+.||++||+|++.|++|++   .++++++++|+++|++||+||++++
T Consensus         1 I~rVP~~lr~~~~~~Y~P~~VsIGPyH~g~~~L~~mE~~K~~~l~~~l~~~~~~~~~l~~~~~~i~~~e~~~R~~Y~~~~   80 (391)
T PF03140_consen    1 IYRVPESLRDVNPKAYTPQVVSIGPYHHGKPDLQEMEEHKLRYLHRFLKRSGAPAESLEDYVEAIRSLEEEARACYAEDI   80 (391)
T ss_pred             CcCCCHHHccCCchhcCCceEEeCCCCCCchhhhhhHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHhcccc
Confidence            8999999999999999999999999999999999999999999999999998   8999999999999999999999999


Q ss_pred             C-CChHHHHHHHHhhHHHHHHHHHHhcCCCCCCCCCc-ccccCCcchhHhhHHHHhhccchHHHHHHHHHhhcCCCCCCC
Q 046838          106 S-LGKNEFVQMMLFDGCFIVEVIRKFGLPHLRGDDDP-IFKQGWMLPHIARDMILLENQLPFFVLWKLFIMSEMPNIPGN  183 (349)
Q Consensus       106 ~-~~~~ef~~MmllDgcFlLe~l~~~~~~~~~~~~d~-~~~~~~~~~~i~~DllLLENQIPffVL~~L~~~~~~~~~~~~  183 (349)
                      + +++++|++||++|||||||+|+.+..  ..+.+|| ++..+|....|.+||+|||||||||||++||++.........
T Consensus        81 ~~~~~~~f~~MmllDgCFlLe~~~~~~~--~~~~~d~~~~~~~~~~~~i~~Dl~LLENQIPffVL~~L~~l~~~~~~~~~  158 (391)
T PF03140_consen   81 DDMSSDEFVEMMLLDGCFLLEFFLRYSR--SDGENDPGIFSRPWLLSAIRRDLLLLENQIPFFVLEKLFELLFGSKSDVD  158 (391)
T ss_pred             cccCHHHHHHHHHHHHHHHHHHHHhhhh--ccccccccccccccccccchhheeeecccchHHHHHHHHHHhcccccCcc
Confidence            8 99999999999999999999999875  2345778 888899999999999999999999999999999984444566


Q ss_pred             chHHHHHHHhhcccCCCCCccCCCCcccCCCCCCcccchhHHHHhhcCCCCCccCccCC-CCCC----CCCcccccCHHH
Q 046838          184 ESFLVTILRFIYGILPGKGFRRDGVERVNDYPINEIKHLVNLIHDNWLPSPSRIDAYGN-NGKN----NSDWSIICSATE  258 (349)
Q Consensus       184 ~~l~~l~~~ff~~~~~~~~~~~~~~~~~~~~~~~~~~HLLdL~~~~~~~p~~~~~~~~~-~~~~----~~~~~~~~sAte  258 (349)
                      .++.+++.+||....+..     ...  ......+++|||||+| .+++|+.....+.. ....    ...+..||||||
T Consensus       159 ~~l~~l~~~~~~~~~~~~-----~~~--~~~~~~~~~HlL~L~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~sA~e  230 (391)
T PF03140_consen  159 ESLIDLVLKFFYKHWPSW-----PPD--EPISNPEPHHLLDLLR-MSLLPSPPSSSPTPPRPPRSNGEKPPPKRIRSATE  230 (391)
T ss_pred             chHHHHHHhHhccccccc-----ccc--ccccCCCCCChHHHHH-HHhccccCCcccCCCCcccccccccccccCCCHHH
Confidence            789999999994322211     011  1244567899999999 99999322111111 0111    123578999999


Q ss_pred             HHhcCcEEEeecCCCCC-ceeeeEEcCceeeeceEEecccchhhhhhHHHHhhhcCCCCCcchhhHHHHHHhhcCChHHH
Q 046838          259 IQKAGIKFQKVDNHRDG-SLFDIKFKNGVMKIPTLEIGDATETIFQNLIVYEQCSHGINPKHILDYCKFLHCLINSSKDA  337 (349)
Q Consensus       259 L~~aGVkfk~~~~~~~~-~llDI~F~~G~L~IP~l~id~~T~~llrNLiA~Eq~~~~~~~~~vtsYv~fM~~LI~t~eDV  337 (349)
                      |++|||+||+   +++. +++||+|++|+|+||+|.||++|+++||||||||||+...+ .+|||||.||++||+|++||
T Consensus       231 L~~aGV~fk~---~~~~~~~lDv~F~~G~L~IP~L~id~~T~~~lrNLiA~Eq~~~~~~-~~vtsY~~fm~~Li~t~~DV  306 (391)
T PF03140_consen  231 LREAGVKFKP---SETDRSLLDVKFKKGVLEIPPLYIDDNTESLLRNLIAFEQCHPPTG-SYVTSYVFFMDSLINTPEDV  306 (391)
T ss_pred             HHhCCcEEee---ccCccccccceecCCEEEeCeEEECCcchHHHhHHHHHHHHhccCC-chHhHHHHHHHHHhCcHhhH
Confidence            9999999999   7655 59999999999999999999999999999999999999887 89999999999999999999


Q ss_pred             HHHHHCCCccCC
Q 046838          338 ELLRRRGIIDNC  349 (349)
Q Consensus       338 ~lL~~~gIi~n~  349 (349)
                      ++|+++|||+|+
T Consensus       307 ~lL~~kgIi~~~  318 (391)
T PF03140_consen  307 ELLRRKGIIVNW  318 (391)
T ss_pred             HHHHhCCeEecC
Confidence            999999999986




Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00