Citrus Sinensis ID: 046861


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870
MATDSNRRNSNAQLLEELEALSQSLYQTHPTTNRRTASLALPRSSVPQITSADENEISASKVDGTSSSRPRSRRMSFSPWRSRPKLDGDIGFENEQRDRGKVSKQPEAKRLDERIGSAEKKGLWNWKPIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVHTMPSRVSQGAADFEETLFVKCHVYFTPGNGKPLRFEPRPFWIYVFAIDAQELNFGRHSVDLSQLIHESMDKSIQGARVRQWDISFNLSGKAKGGELVLKLGFQIMEKDGGIDIYSQTEGAKSNKSRNFTSSFGRKQSKTSFSVPSPRLASRAEAWTPSQTGASADLQGIDDLNLDEPDPVPSSSTSVKKSEEPEPKKEVAEDQDLDLPDFEVVDKGVEIQNKVEAAQGASEGESVSSEVVKEMMHDPLHLSRLTELDSIAQQIKALESMMEEERIIKTESQRLDADEETVTREFLQMLEDEGTKEFNFYQPEIPPLQLDGTEDTNDTKTKVYLPDLGKGLGSVVQTRDGGYLVAMNPLDIEVARKETPKLAMQISKPLVLPSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQGRNKEGASSSAARTIAAVKTMATATSTGRKERISTGIWNVNENPMTAEEILAFSLQKIETMTVEALKVQAEIAEEDAPFDVSPLSEKIITGSGKYQNHPLASAIPLEDWTKSYSLTTWNGQPRDQETITLAVVIQLRDPIRRYEAVGGPVVALIHADEVRAEINKDNKYDEEKRFKVTSSHLGGFKVRSGGKRSLWDGEKQRLTAKQWLLAYGLGKAGKKGKHVFIKGQDLLWSISSRVMADMWLKPIRNPDVKFSK
ccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccEEEEEEEEEccccccccccEEEEEEEEcccccccEEEccccccccccccccEEEEEEEEEEEcccccccccccccEEEEEEEEcccccccccccccHHHHHHHHHHHHccccccccEEEEEEccccccccEEEEEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccHHHHHHHHccccccccccccEEEccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccEEcccccEEEEcccccHHHHHccccccEEEEcccEEEcccccccHHHHHHHHHHHcHHHHHHHHHHccccccccccHHHHHHHccHHHHHHccccccccccHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccEEEEEEEEccccccccccccccEEEEEEEEEEEHHHcccccccccccEEEEEEEEEcccccccccccccccccccccHHHHHHHHccccccccccccccccccEEEEEEEcccccccccccccccccccc
ccccccccccHHHHHHHHHHHHHHHHHcccccccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccEEEEEEEEEEccccccccccEEEEEEEEcccccccEEcccHEEHcccHHHHHEEEEEEEEEEcccccccEEEccccEEEEEEEEcccccccccccccHHHHHHHHHHHcccccccccEcEEEccccccccEEEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccHHHccccccccccccccccccccccccccccccccccccccEEEEcccEEEEccccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHccccHHHHHHHHHHHHHccccccccccccccccHHcccccccccccccccccccccccccEEEccccccEHccccccHHHcccccccEEEEEcccEEEccHccccHHHHHHHHHHHcHHHHHHHHHHHccHHHHccccHHHHHHHHcHHHHHcccccccccccHHHHHHcccccHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHcccccccccccccccHHHHHHHcccccccccccccccEEEEEEEEEcccccccccccccEEEEEEEEEEEEcccccccccccccEEEEEEEEEEEEEcccccccccccHHHHHHHHHHHHHccccccccccccEEcccccEEEEEEcHHHccccccccccccEEEcc
matdsnrrnSNAQLLEELEALSQSLyqthpttnrrtaslalprssvpqitsadeneisaskvdgtsssrprsrrmsfspwrsrpkldgdigfeneqrdrgkvskqpeakrLDERIGSaekkglwnwkpiraLTHIGMQKLSCLFSVEVVTvqglpasmnglrLSVCVRkketkdgavhtmpsrvsqgaadFEETLFVKCHvyftpgngkplrfeprpfWIYVFAIDAqelnfgrhsvdLSQLIHESMDKSIQGARVRQwdisfnlsgkakggELVLKLGFQIMekdggidiysqtegaksnksrnftssfgrkqsktsfsvpsprlasraeawtpsqtgasadlqgiddlnldepdpvpssstsvkkseepepkkevaedqdldlpdfevvDKGVEIQNKVEAaqgasegesvSSEVVKEmmhdplhlsrltELDSIAQQIKALESMMEEERIIKTESqrldadeeTVTREFLQMLEDEgtkefnfyqpeipplqldgtedtndtktkvylpdlgkglgsvvqtrdggylvamnpldievarketpklamqiskplvlpsnkstsGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQGrnkegasssAARTIAAVKTMATATSTGRKERIStgiwnvnenpmtAEEILAFSLQKIETMTVEALKVQAEIaeedapfdvsplsekiitgsgkyqnhplasaipledwtksyslttwngqprdqETITLAVVIQLRDpirryeavggpvVALIHADEVRAEInkdnkydeekrfkvtsshlggfkvrsggkrslwdGEKQRLTAKQWLLAYGlgkagkkgkhvfiKGQDLLWSISSRVMADmwlkpirnpdvkfsk
matdsnrrnsnAQLLEELEALSQSLYQTHpttnrrtaslalprssvpqitsadeneisaskvdgtsssrprsrrmsfspwrsrpkldgdigfeneqrdrgkvskqpeakrlderigsaekkglwnwkPIRALTHIGMQKLSCLFSVEVVTVQGlpasmnglrlSVCVRKKEtkdgavhtmpsrvsqgaADFEETLFVKCHVYFTPGNGKPLRFEPRPFWIYVFAIDAQELNFGRHSVDLSQLIHESMDKSIQGARVRQWDISFNlsgkakggELVLKLGFQIMEKDGGIDIysqtegaksnksrnftssfgrkqsktsfsvpsprLASRAEAWTPSQTGASADLQGIDDLNLDEPdpvpssstsvkkseepepkkevaedqdldlpdFEVVDKGVEIQNKveaaqgasegesVSSEVVKEMMHDPLHLSRLTELDSIAQQIKALESMMEEERIIktesqrldadeeTVTREFLQMLEDEGTKEFNFYQPEipplqldgtedtNDTKTKvylpdlgkglgsvVQTRDGGYLVAMNPLDIEVARKETPKLAMQISKPLVLPSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQGRNKEGASSSAARTIAAVKTmatatstgrkeristgiwnvnenpMTAEEILAFSLQKIETMTVEALKVQAEIaeedapfdvsPLSEKIITGSGKYQNHPLASAIPLEDWTKSYSLttwngqprdqETITLAVVIQLRDPIRRYEAVGGPVValihadevraeinkdnkydeekrfkvtsshlggfkvrsggkrslwdgeKQRLTAKQWLLAYGLgkagkkgkhvfIKGQDLLWSISSRVMAdmwlkpirnpdvkfsk
MATDSNRRnsnaqlleelealsqslYQTHPTTNRRTASLALPRSSVPQITSADENEISASKVDGTsssrprsrrmsfspwrsrpKLDGDIGFENEQRDRGKVSKQPEAKRLDERIGSAEKKGLWNWKPIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVHTMPSRVSQGAADFEETLFVKCHVYFTPGNGKPLRFEPRPFWIYVFAIDAQELNFGRHSVDLSQLIHESMDKSIQGARVRQWDISFNLSGKAKGGELVLKLGFQIMEKDGGIDIYSQTEGAKSNKSRNFTSSFGRKQSKTSFSVPSPRLASRAEAWTPSQTGASADLQGIDDLNLDepdpvpssstsvkkseepepkkevAEDQDLDLPDFEVVDKGVEIQNKveaaqgasegesvssevvKEMMHDPLHLSRLTELDSIAQQIKALESMMEEERIIKTESQRLDADEETVTREFLQMLEDEGTKEFNFYQPEIPPLQLDGTEDTNDTKTKVYLPDLGKGLGSVVQTRDGGYLVAMNPLDIEVARKETPKLAMQISKPLVLPSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQGRNKEGASSSAARTIAAVKTMATATSTGRKERISTGIWNVNENPMTAEEILAFSLQKIETMTVEALKVQAEIAEEDAPFDVSPLSEKIITGSGKYQNHPLASAIPLEDWTKSYSLTTWNGQPRDQETITLAVVIQLRDPIRRYEAVGGPVVALIHADEVRAEINKDNKYDEEKRFKVTSSHLGGFKVRSGGKRSLWDGEKQRLTAKQWllayglgkagkkgkHVFIKGQDLLWSISSRVMADMWLKPIRNPDVKFSK
************************************************************************************************************************KGLWNWKPIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRK*****************GAADFEETLFVKCHVYFTPGNGKPLRFEPRPFWIYVFAIDAQELNFGRHSVDLSQLIHESMDKSIQGARVRQWDISFNLSGKAKGGELVLKLGFQIMEKDGGIDIY***********************************************************************************************************************************************************************************************FNFYQ******************TKVYLPDLGKGLGSVVQTRDGGYLVAMNPLDIEVARK**********************GFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQ*******************************RISTGIWNVNENPMTAEEILAFSLQKIETMTVEALKVQAEIAEEDAPFDVSPLSEKIITGSGKYQNHPLASAIPLEDWTKSYSLTTWNGQPRDQETITLAVVIQLRDPIRRYEAVGGPVVALIHADEVRAEIN****************HLGGFKVRSGGKRSLWDGEKQRLTAKQWLLAYGLGKAGKKGKHVFIKGQDLLWSISSRVMADMWLKPI*********
***************EELEALSQSLYQT*************************************************************************************************WKPIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVHTMPSRVSQGAADFEETLFVKCHVYFTPGNG***RFEPRPFWIYVFAIDAQELNFGRHSVDLSQL*******************SFNLSGKAKGGELVLKLGFQIMEKD*************************************************************************************************DLPDFEVVD**************************KEMMHDPLHLSRLT*********************************ETVTREFLQ***********************************YLPDLGKGLGSVVQTRDGGYLVAMNPLDIEV*RKETPKLAMQISKPLVLPSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIA************************************************PMTAEEILAFSLQKIETMTVEALKVQAEIAEEDAP********************PLASAIPLEDWTKSYS********RDQETITLAVVIQLRDPIRRYEAVGGPVVALIHADEV**************RFKVTSSHLGG*******************TAKQWLLA*************************SRV***MWLKPIRNPDVKF**
**********NAQLLEELEALSQSLYQTHPTTNRRTASLALPRSSVPQITSADE**************************RSRPKLDGDIGFENE**************RLDERIGSAEKKGLWNWKPIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVHTMPSRVSQGAADFEETLFVKCHVYFTPGNGKPLRFEPRPFWIYVFAIDAQELNFGRHSVDLSQLIHESMDKSIQGARVRQWDISFNLSGKAKGGELVLKLGFQIMEKDGGIDIYSQTE*******************************************ASADLQGIDDLNLDEP*************************QDLDLPDFEVVDKGVEIQNKVE**************VVKEMMHDPLHLSRLTELDSIAQQIKALESMMEEERIIKTESQRLDADEETVTREFLQMLEDEGTKEFNFYQPEIPPLQLDGTEDTNDTKTKVYLPDLGKGLGSVVQTRDGGYLVAMNPLDIEVARKETPKLAMQISKPLVLPSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQG***********RTIAAVKTMATATSTGRKERISTGIWNVNENPMTAEEILAFSLQKIETMTVEALKVQAEIAEEDAPFDVSPLSEKIITGSGKYQNHPLASAIPLEDWTKSYSLTTWNGQPRDQETITLAVVIQLRDPIRRYEAVGGPVVALIHADEVRAEINKDNKYDEEKRFKVTSSHLGGFKVRSGGKRSLWDGEKQRLTAKQWLLAYGLGKAGKKGKHVFIKGQDLLWSISSRVMADMWLKPIRNPDVKFSK
**********NAQLLEELEALSQSLYQTHPTT*R*T************************************************************************************KGLWNWKPIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVHTMPSRVSQGAADFEETLFVKCHVYFTPGNGKPLRFEPRPFWIYVFAIDAQELNFGRHSVDLSQLIHESMDKSIQGARVRQWDISFNLSGKAKGGELVLKLGFQIMEKDG***********************************************************************************************LDLPDFEVVDKGVEIQNK**************SEVVKEMMHDPLHLSRLTELDSIAQQIKALESMMEE**************EETVTREFLQMLEDEGTKE************************KVYLPDLGKGLGSVVQTRDGGYLVAMNPLDIEVARKETPKLAMQISKPLVLPSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQ******************************************NPMTAEEILAFSLQKIETMTVEALKVQAEIAE*D**********************PLASAIPLEDWTKSYSLTTW**QPRDQETITLAVVIQLRDPIRRYEAVGGPVVALIHADEVRAEINKDNKYDEEKRFKVTSSHLGGFKVRSGGKRSLWDGEKQRLTAKQWLLAYGLGKAGKKGKHVFIKGQDLLWSISSRVMADMWLKPIRNPDVKFSK
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MATDSNRRNSNAQLLEELEALSQSLYQTHPTTNRRTASLALPRSSVPQITSADENEISASKVDGTSSSRPRSRRMSFSPWRSRPKLDGDIGFENEQRDRGKVSKQPEAKRLDERIGSAEKKGLWNWKPIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVHTMPSRVSQGAADFEETLFVKCHVYFTPGNGKPLRFEPRPFWIYVFAIDAQELNFGRHSVDLSQLIHESMDKSIQGARVRQWDISFNLSGKAKGGELVLKLGFQIMEKDGGIDIYSQTEGAKSNKSRNFTSSFGRKQSKTSFSVPSPRLASRAEAWTPSQTGASADLQGIDDLNLDEPDPVPSSSTSVKKSEEPEPKKEVAEDQDLDLPDFEVVDKGVEIQNKVEAAQGASEGESVSSEVVKEMMHDPLHLSRLTELDSIAQQIKALESMMEEERIIKTESQRLDADEETVTREFLQMLEDEGTKEFNFYQPEIPPLQLDGTEDTNDTKTKVYLPDLGKGLGSVVQTRDGGYLVAMNPLDIEVARKETPKLAMQISKPLVLPSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQGRNKEGASSSAARTIAAVKTMATATSTGRKERISTGIWNVNENPMTAEEILAFSLQKIETMTVEALKVQAEIAEEDAPFDVSPLSEKIITGSGKYQNHPLASAIPLEDWTKSYSLTTWNGQPRDQETITLAVVIQLRDPIRRYEAVGGPVVALIHADEVRAEINKDNKYDEEKRFKVTSSHLGGFKVRSGGKRSLWDGEKQRLTAKQWLLAYGLGKAGKKGKHVFIKGQDLLWSISSRVMADMWLKPIRNPDVKFSK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query870
255539306865 conserved hypothetical protein [Ricinus 0.977 0.982 0.731 0.0
225457628859 PREDICTED: uncharacterized protein LOC10 0.977 0.989 0.721 0.0
449455728866 PREDICTED: uncharacterized protein LOC10 0.972 0.976 0.691 0.0
224086096728 predicted protein [Populus trichocarpa] 0.826 0.987 0.744 0.0
224061847730 predicted protein [Populus trichocarpa] 0.829 0.989 0.741 0.0
356561774860 PREDICTED: uncharacterized protein LOC10 0.964 0.975 0.634 0.0
356529358857 PREDICTED: uncharacterized protein LOC10 0.959 0.974 0.610 0.0
357521543892 hypothetical protein MTR_8g106680 [Medic 0.960 0.937 0.624 0.0
356513006855 PREDICTED: uncharacterized protein LOC10 0.948 0.964 0.616 0.0
356527878853 PREDICTED: uncharacterized protein LOC10 0.924 0.942 0.586 0.0
>gi|255539306|ref|XP_002510718.1| conserved hypothetical protein [Ricinus communis] gi|223551419|gb|EEF52905.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
 Score = 1234 bits (3193), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/875 (73%), Positives = 739/875 (84%), Gaps = 25/875 (2%)

Query: 5   SNRRNSNAQLLEELEALSQSLYQTHPTTNRRT-ASLALPRSSVPQITSADENEISASKVD 63
           SNRRNSN QLLEELEALSQSLYQTH TT  R  ASLALPR+SVP + S DE  IS SK D
Sbjct: 7   SNRRNSNTQLLEELEALSQSLYQTHTTTTNRRTASLALPRTSVPSLASVDE--ISTSKPD 64

Query: 64  GTSSSRPRSRRMSFSPWRSRPKLDGDIGFENEQRDRGKVSKQPEAKRLDERIGSAEKKGL 123
             S+SRPRSRRMS SPWRSRPK D     +NE ++R   S QP+ K+LDE   S EKKG+
Sbjct: 65  EKSTSRPRSRRMSLSPWRSRPKPD-----DNEPKNRAGPSNQPDTKKLDETTASMEKKGI 119

Query: 124 WNWKPIRALTHIGMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVHTMPSR 183
           WNWKP+RAL+HIGMQKLSCLFSVEVV VQGLPASMNGLRLS+C+RKKETKDGAVHTMPSR
Sbjct: 120 WNWKPLRALSHIGMQKLSCLFSVEVVAVQGLPASMNGLRLSICIRKKETKDGAVHTMPSR 179

Query: 184 VSQGAADFEETLFVKCHVYFTPGNGKPLRFEPRPFWIYVFAIDAQELNFGRHSVDLSQLI 243
           VSQG ADFEETLFVKCHVY TPG+G+ L+FEPRPFWIYVFA+DA+EL+FGR  +DLS LI
Sbjct: 180 VSQGTADFEETLFVKCHVYCTPGDGRQLKFEPRPFWIYVFAVDAEELDFGRGFMDLSHLI 239

Query: 244 HESMDKSIQGARVRQWDISFNLSGKAKGGELVLKLGFQIMEKDGGIDIYSQTEGAKSNKS 303
            ESM+K+ +G R+RQWD SFNLSGKAKGGELVLKLGFQIMEKDGGIDIYSQ +G KS+K 
Sbjct: 240 KESMEKNQEGTRIRQWDTSFNLSGKAKGGELVLKLGFQIMEKDGGIDIYSQGDGFKSSKL 299

Query: 304 RNFTSSFGRKQSKTSFSVPSPRLASRAEAWTPSQTGASADLQGIDDLNLDEPDPVPSSST 363
           RN TSSFGRKQSK SFSVPSPR++SR EAWTPSQ+ A+ DLQG+DDLNLDEP PVPS+  
Sbjct: 300 RNLTSSFGRKQSKMSFSVPSPRMSSRTEAWTPSQSKAAIDLQGMDDLNLDEPAPVPSTPP 359

Query: 364 SVKKSEEPEPKKEVAEDQDLDLPDFEVVDKGVEIQNKVEAAQGAS----EGESVSSEVVK 419
            V+KSEEPE K E     +L+LPDF+VVDKGVEIQ K E+    S    E +S SSEVVK
Sbjct: 360 PVQKSEEPESKIE-----ELELPDFDVVDKGVEIQQKEESRDRESEENVEAKSASSEVVK 414

Query: 420 EMMHDPLHLSRLTELDSIAQQIKALESMMEEERIIK----TESQRLDADEETVTREFLQM 475
           EM+HD +HL+RLTELDSIAQQIKALESMM EE+I+K    TESQRLDADEETVT+EFLQM
Sbjct: 415 EMVHDQIHLTRLTELDSIAQQIKALESMMVEEKILKTDDETESQRLDADEETVTKEFLQM 474

Query: 476 LEDEGTKEFNFYQPEIPPLQLDGTEDTNDTKTKVYLPDLGKGLGSVVQTRDGGYLVAMNP 535
           LEDE    + F QP  P LQL G +++ + ++KVY+ DLGKGLG VVQTR+ GYL AMNP
Sbjct: 475 LEDEEIDTYRFNQPVFPSLQLGGADESVEAESKVYVSDLGKGLGCVVQTRNRGYLAAMNP 534

Query: 536 LDIEVARKETPKLAMQISKPLVLPSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELM 595
           L+  V+RKETPKLAMQISKP+V+P +KS SGFE+FQ+MAA+GFEELSSQILSLMP++EL+
Sbjct: 535 LNTVVSRKETPKLAMQISKPIVIP-HKSMSGFELFQKMAAIGFEELSSQILSLMPMEELI 593

Query: 596 GKTAEQIAFEGIASAIIQGRNKEGASSSAARTIAAVKTMATATSTGRKERISTGIWNVNE 655
           GKTAEQIAFEGIASAI+QGRNKEGASSSAARTIA+VKTMATA +TGRKER++TGIWNV+E
Sbjct: 594 GKTAEQIAFEGIASAIVQGRNKEGASSSAARTIASVKTMATAMNTGRKERVTTGIWNVDE 653

Query: 656 NPMTAEEILAFSLQKIETMTVEALKVQAEIAEEDAPFDVSPLSEKIITGSGKYQNHPLAS 715
           N +TA+EILAFSLQ IE M+VEALK+QA++AEEDAPFDVSPL+EK  T S K QN PLAS
Sbjct: 654 NQLTADEILAFSLQNIEAMSVEALKIQADMAEEDAPFDVSPLTEKTRTSSEKEQNQPLAS 713

Query: 716 AIPLEDWTKSYSLTTWNGQPRDQETITLAVVIQLRDPIRRYEAVGGPVVALIHADEVRAE 775
           AIPLEDW K+YS ++ N +  +  TIT+AVV+QLRDP+RRYEAVGG VVALIHA  V  +
Sbjct: 714 AIPLEDWIKNYSSSSSNSESGEPATITVAVVVQLRDPLRRYEAVGGLVVALIHATGVDIQ 773

Query: 776 INKDNKYDEEKRFKVTSSHLGGFKVRSGGKRSLWDGEKQRLTAKQWLLAYGLGKAGKKGK 835
              ++KYDEEK+FKVTS H+GG K+R GGKR+LWD E+ RLTA QWL+AYGLGK GK+GK
Sbjct: 774 ---EHKYDEEKKFKVTSLHVGGLKLRIGGKRNLWDTERHRLTAMQWLVAYGLGKGGKRGK 830

Query: 836 HVFIKGQDLLWSISSRVMADMWLKPIRNPDVKFSK 870
           +V  KGQDLLWSISSR+MADMWLKP+RNPDVKF+K
Sbjct: 831 NVLAKGQDLLWSISSRIMADMWLKPMRNPDVKFTK 865




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225457628|ref|XP_002273127.1| PREDICTED: uncharacterized protein LOC100244427 [Vitis vinifera] Back     alignment and taxonomy information
>gi|449455728|ref|XP_004145603.1| PREDICTED: uncharacterized protein LOC101218314 [Cucumis sativus] gi|449485257|ref|XP_004157115.1| PREDICTED: uncharacterized protein LOC101224765 [Cucumis sativus] Back     alignment and taxonomy information
>gi|224086096|ref|XP_002307813.1| predicted protein [Populus trichocarpa] gi|222857262|gb|EEE94809.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224061847|ref|XP_002300628.1| predicted protein [Populus trichocarpa] gi|222842354|gb|EEE79901.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356561774|ref|XP_003549153.1| PREDICTED: uncharacterized protein LOC100807468 [Glycine max] Back     alignment and taxonomy information
>gi|356529358|ref|XP_003533261.1| PREDICTED: uncharacterized protein LOC100818316 [Glycine max] Back     alignment and taxonomy information
>gi|357521543|ref|XP_003631060.1| hypothetical protein MTR_8g106680 [Medicago truncatula] gi|355525082|gb|AET05536.1| hypothetical protein MTR_8g106680 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356513006|ref|XP_003525205.1| PREDICTED: uncharacterized protein LOC100785837 [Glycine max] Back     alignment and taxonomy information
>gi|356527878|ref|XP_003532533.1| PREDICTED: uncharacterized protein LOC100793119 [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query870
TAIR|locus:2036645843 PMI1 "AT1G42550" [Arabidopsis 0.773 0.798 0.568 1.1e-190
TAIR|locus:2180424 1164 AT5G20610 "AT5G20610" [Arabido 0.295 0.220 0.292 3.8e-45
TAIR|locus:2179729 976 AT5G26160 "AT5G26160" [Arabido 0.189 0.169 0.350 6.5e-40
TAIR|locus:2036645 PMI1 "AT1G42550" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1848 (655.6 bits), Expect = 1.1e-190, P = 1.1e-190
 Identities = 403/709 (56%), Positives = 494/709 (69%)

Query:    33 NRRTASLALPRSSVPQ-ITSADENEISASKVDGTXXXXXXXXXXXXXXXXXXXKLDGDIG 91
             NRRT SLALPRSSVP  +TSADE  +S ++ +                     KL+  + 
Sbjct:    36 NRRTNSLALPRSSVPSLVTSADE--VSTARAEDLTVSKPRARRLSLSPWRSRPKLE--VE 91

Query:    92 FENEQRDRGKVSKQPEAKRLDERIGSAEKKGLWNWKPIRALTHIGMQKLSCLFSVEVVTV 151
              E       ++ K+PE       +   EKKG+WNWKPIR L  IGMQKLSCL SVEVV  
Sbjct:    92 EEENVTQSNRIVKKPEESSSGSGV-KEEKKGIWNWKPIRGLVRIGMQKLSCLLSVEVVAA 150

Query:   152 QGLPASMNGLRLSVCVRKKETKDGAVHTMPSRVSQGAADFEETLFVKCHVYFTPGNGK-- 209
             Q LPASMNGLRL VCVRKKETKDGAV TMP RVSQG+ADFEETLF+KCHVY++P NGK  
Sbjct:   151 QNLPASMNGLRLGVCVRKKETKDGAVQTMPCRVSQGSADFEETLFIKCHVYYSPANGKGS 210

Query:   210 PLRFEPRPFWIYVFAIDAQELNFGRHSVDLSQLIHESMDK-SIQGARVRQWDISFNLSGK 268
             P +FE RPF  Y+FA+DA+EL FGRH VDLS+LI ES++K + +GARVRQWD+++ LSGK
Sbjct:   211 PAKFEARPFLFYLFAVDAKELEFGRHVVDLSELIQESVEKMNYEGARVRQWDMNWGLSGK 270

Query:   269 AKGGELVLKLGFQIMEKDGGIDIYS-QTE-GAK-SNKSRNFTSSFGRKQSKTSFSVPSPR 325
             AKGGEL LKLGFQIMEKDGG  IYS Q E G K S+K +NF +SFGRKQSKTSFSVPSP+
Sbjct:   271 AKGGELALKLGFQIMEKDGGAGIYSKQGEFGMKPSSKPKNFANSFGRKQSKTSFSVPSPK 330

Query:   326 LASRAEAWTPSQTGAS-ADLQGIDDLNLDXXXXXXXXXXXXXXXXXXXXXXXXAEDQDLD 384
             + SR+EAWTP+    S +D  G++ LNLD                        AED D +
Sbjct:   331 MTSRSEAWTPASGVESVSDFHGMEHLNLDEPEEKPEEKPVQKNDKPEQR----AED-DQE 385

Query:   385 LPDFEVVDKGVEIQNKXXXXXXXXXXXXXXXXXXKEMMH--DPLHLSRLTELDSIAQQIK 442
              PDFEVVDKGVE  +                   ++ ++  DP H+ RLTELDSIA+QIK
Sbjct:   386 EPDFEVVDKGVEFDDDLETEKSDGTIGERSVEMKEQHVNVDDPRHIMRLTELDSIAKQIK 445

Query:   443 ALESMMEEERII---KTESQRLDADEETVTREFLQMLEDEGTKEFNFYQPEIPPLQLDGT 499
             ALESMM++E      +TESQRLD +E+TVT+EFLQ+LEDE T++  FYQ ++   +L   
Sbjct:   446 ALESMMKDESDGGDGETESQRLDEEEQTVTKEFLQLLEDEETEKLKFYQHKMDISELRSG 505

Query:   500 EDTNDTKTKVYLPDLGKGLGSVVQTRDGGYLVAMNPLDIEVARKETPKLAMQISKPLV-L 558
             E  +D +++ YL DLGKG+G VVQTRDGGYLV+MNP D  V RK+TPKL MQISK +V L
Sbjct:   506 ESVDD-ESENYLSDLGKGIGCVVQTRDGGYLVSMNPFDTVVMRKDTPKLVMQISKQIVVL 564

Query:   559 PSNKSTSGFEVFQQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQGRNKE 618
             P     +GFE+F +MA  G EEL S+I SLM +DELMGKT EQ+AFEGIASAIIQGRNKE
Sbjct:   565 PEAGPATGFELFHRMAGSG-EELESKISSLMAIDELMGKTGEQVAFEGIASAIIQGRNKE 623

Query:   619 GASSSAARTIAAVKTMATATSTGRKERISTGIWNVNENPMT-AEEILAFSLQKIETMTVE 677
              A++SAART+AAVKTMA A S+GR+ERI TGIWNV ENP+T AEE+LA SLQK+E M VE
Sbjct:   624 RANTSAARTVAAVKTMANAMSSGRRERIMTGIWNVEENPLTSAEEVLAVSLQKLEEMVVE 683

Query:   678 ALKVQAEIAEEDAPFDVSPLSEKIITGSGKYQNHPLASAIPLEDWTKSY 726
              LK+QA++ +++APF+VS         + K Q +PL S IPLE+W K +
Sbjct:   684 GLKIQADMVDDEAPFEVS---------AAKGQKNPLESTIPLEEWQKEH 723


GO:0003674 "molecular_function" evidence=ND
GO:0009507 "chloroplast" evidence=ISM
GO:0005886 "plasma membrane" evidence=IDA
GO:0009902 "chloroplast relocation" evidence=RCA;IMP
GO:0030036 "actin cytoskeleton organization" evidence=IMP
GO:0005829 "cytosol" evidence=RCA
GO:0006364 "rRNA processing" evidence=RCA
GO:0010027 "thylakoid membrane organization" evidence=RCA
GO:0010207 "photosystem II assembly" evidence=RCA
GO:0034660 "ncRNA metabolic process" evidence=RCA
GO:0035304 "regulation of protein dephosphorylation" evidence=RCA
GO:0042793 "transcription from plastid promoter" evidence=RCA
GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA
TAIR|locus:2180424 AT5G20610 "AT5G20610" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2179729 AT5G26160 "AT5G26160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Fail to connect to STRING server


Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query870
pfam10358142 pfam10358, NT-C2, N-terminal C2 in EEIG1 and EHBP1 4e-13
>gnl|CDD|220715 pfam10358, NT-C2, N-terminal C2 in EEIG1 and EHBP1 proteins Back     alignment and domain information
 Score = 67.4 bits (165), Expect = 4e-13
 Identities = 25/154 (16%), Positives = 57/154 (37%), Gaps = 16/154 (10%)

Query: 136 GMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVHTMPSRVSQGAADFEETL 195
             +K+   F + +  +Q +P       L V  ++ + K  +  T  + V+ G A + E  
Sbjct: 1   KKKKVKFQFDLSIHELQNVPLV--NGELFVKWKRGDKKGNSGTTSKALVNNGRAVWNEEF 58

Query: 196 FVKCHVYFTPGNGKPLRFEPRPFWIYVFAID--AQELNFGRHSVDLSQLIHESMDKSIQG 253
            + C ++     GK   FEP+     V+ +    ++   G+  +DL++  +     + + 
Sbjct: 59  SIPCTLFVDKKGGK---FEPKLLTFVVYKVTKKGKKKVLGKADIDLAEYANSKEPTTRR- 114

Query: 254 ARVRQWDISFNLSGKAKGGELVLKLGFQIMEKDG 287
                           K   L + +    + +D 
Sbjct: 115 --------LLLKKCSKKNATLSITISLLPLSEDP 140


This version of the C2 domain was initally identified in the vertebrate estrogen early-induced gene 1 (EEIG1), and its Drosophila ortholog required for uptake of dsRNA via the endocytotic machinery to induce RNAi silencing. It is also in C.elegans ortholog Sym-3 (SYnthetic lethal with Mec-3) and the mammalian protein EHBP1 (EH domain Binding Protein-1) that regulates endocytotic recycling and two plant proteins, RPG that regulates Rhizobium-directed polar growth and PMI1 (Plastid Movement Impaired 1) that is essential for intracellular movement of chloroplasts in response to blue light. Length = 142

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 870
PF10358143 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; 99.48
>PF10358 NT-C2: N-terminal C2 in EEIG1 and EHBP1 proteins; InterPro: IPR019448 This entry represents the N-terminal 150 residues of a family of conserved proteins which are induced by oestrogen [] Back     alignment and domain information
Probab=99.48  E-value=2.6e-13  Score=126.53  Aligned_cols=135  Identities=17%  Similarity=0.352  Sum_probs=117.2

Q ss_pred             CcccccceEEEEEeeecCCCcCCCCCeeEEEEEeeecCCCceeecCcccccccccccceeeeeeEEeeeCCCCCcccccc
Q 046861          136 GMQKLSCLFSVEVVTVQGLPASMNGLRLSVCVRKKETKDGAVHTMPSRVSQGAADFEETLFVKCHVYFTPGNGKPLRFEP  215 (870)
Q Consensus       136 G~rR~~ClFSv~VhsieGLPaSmnGlrL~V~vrkketkdg~~qT~PaRV~qG~AeFeEtL~~rCsVY~srg~~~~~KyE~  215 (870)
                      +++++.|.|.|+||.++++|.  .+..+.|.|+|...+.+..+|.++.|.+|.|.|+|++.+.|++|...   +..+||+
T Consensus         1 ~~~~~kf~~~l~i~~l~~~p~--~~~~v~v~wkr~~~~~~~~~t~~~~~~~~~v~w~e~~~~~~tl~~~~---k~~~~~~   75 (143)
T PF10358_consen    1 KKKAVKFQFDLTIHELENLPS--SNGKVFVKWKRGDKSKGSGTTSRANVKNGKVQWNEEFSFPCTLYRDK---KSKEFQP   75 (143)
T ss_pred             CCceeeEEEEEEEEEeECcCC--CCCEEEEEEEECCCCccceeeeeeeccccEEEEeeEEEEEEEEEEcC---CCCcEee
Confidence            367899999999999999999  88999999999644444799999999999999999999999999983   5568999


Q ss_pred             cceEEEEEecc-ccc-ccccccccchhhHhHHhHHhhhcCcccccceeccccccc-ccccEEEEEecEEEEe
Q 046861          216 RPFWIYVFAID-AQE-LNFGRHSVDLSQLIHESMDKSIQGARVRQWDISFNLSGK-AKGGELVLKLGFQIME  284 (870)
Q Consensus       216 r~F~l~~~~v~-a~e-ldlGkh~VDLs~Ll~~Sle~~~eg~~~~~W~tsF~LsGk-AkGa~L~v~~g~qvm~  284 (870)
                      +.+.++|..+. ... ..||++.+||++++..+         ...++..|.|.+. ..+|.|.|++.|..++
T Consensus        76 K~~~~~v~~~~~~~~k~~lG~~~inLaey~~~~---------~~~~~~~~~l~~~~~~~a~L~isi~~~~~~  138 (143)
T PF10358_consen   76 KELKFSVFEVDGSGKKKVLGKVSINLAEYANED---------EEPITVRLLLKKCKKSNATLSISISLSELR  138 (143)
T ss_pred             EEEEEEEEEecCCCccceEEEEEEEHHHhhCcC---------CCcEEEEEeCccCCCCCcEEEEEEEEEECc
Confidence            99999999883 233 48999999999999865         3356677888887 9999999999999887



Proteins in this entry are usually annotated as Fam102A, Fam102B, or Eeig1 (early oestrogen-responsive gene product 1).


Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query870
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 54.1 bits (129), Expect = 2e-07
 Identities = 72/606 (11%), Positives = 162/606 (26%), Gaps = 190/606 (31%)

Query: 308 SSFGRKQSKTSFSVPSPRLASRAEAWTPSQTGASADLQGIDDLNLDEPDPVPSSSTSVKK 367
           S   +++             +    WT          + ++++     +      + +K 
Sbjct: 44  SILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEV--LRIN-YKFLMSPIKT 100

Query: 368 -SEEPEPKKEVAEDQ-DLDLPDFEVVDKG--------VEIQNKVEAAQ-----------G 406
              +P     +  +Q D    D +V  K         ++++  +   +           G
Sbjct: 101 EQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG 160

Query: 407 ASEGESV------SSEVVKEMMHDP---LHLSRLTELDSIAQQIKALESMME---EERII 454
           +  G++        S  V+  M      L+L      +++ + ++ L   ++     R  
Sbjct: 161 S--GKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSD 218

Query: 455 KTESQRLDADEETVTREFLQMLEDEGTKEFNFYQPEIPP--LQLDGTEDTNDTKT-KVYL 511
            + + +L        +  L+ L                   L L    +  + K    + 
Sbjct: 219 HSSNIKLRIHSI---QAELRRL---------LKSKPYENCLLVLL---NVQNAKAWNAF- 262

Query: 512 PDLG-KGLGSVVQTRDGGYLVAMNPLDIEVARKETPKLAMQISKPLVLPSNKSTSGFEVF 570
            +L  K L   + TR     V     D   A   T       S  L     K      + 
Sbjct: 263 -NLSCKIL---LTTRFKQ--VT----DFLSAATTTHISLDHHSMTLTPDEVK-----SLL 307

Query: 571 QQMAAVGFEELSSQILSLMPVDELMGKTAEQIAFEGIASAIIQGRNKEGASSSAARTIAA 630
            +      ++L  ++L+  P                   +II           A      
Sbjct: 308 LKYLDCRPQDLPREVLTTNP----------------RRLSII-----------AESI--- 337

Query: 631 VKTMATATSTGRKERISTGIWN----VNENPMTAEEILAFSLQKIETMTVEALKVQAEIA 686
                       ++ ++T  W+    VN + +T   I+  SL  +E      +  +  + 
Sbjct: 338 ------------RDGLAT--WDNWKHVNCDKLT--TIIESSLNVLEPAEYRKMFDRLSVF 381

Query: 687 EEDAPFDVSPLSEKIITGSGKYQNHPLASAIPLEDWTKSYSLTTWNGQPRDQETIT--LA 744
              A                          IP    T   SL  ++    D   +   L 
Sbjct: 382 PPSAH-------------------------IP----TILLSLIWFDVIKSDVMVVVNKLH 412

Query: 745 V--VIQLRDPIRRYEAVGGPVVALIHADEVRAEINKDNKYDEEKRFKVTSSHLGGFKVRS 802
              +++ +                I +  +  ++  +N+Y   +        +  + +  
Sbjct: 413 KYSLVEKQPKESTIS---------IPSIYLELKVKLENEYALHRSI------VDHYNIPK 457

Query: 803 GGKRSLWDGEKQRLTAKQ---WLLAYGLGKAGKKGKHVFIKGQDLLWSISSRVMADM-WL 858
                  D     L   Q     + +          H+         ++   V  D  +L
Sbjct: 458 --TFDSDDLIPPYL--DQYFYSHIGH----------HLKNIEHPERMTLFRMVFLDFRFL 503

Query: 859 KP-IRN 863
           +  IR+
Sbjct: 504 EQKIRH 509


>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

No hit with probability above 80.00


Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

No hit with probability above 80.00