Citrus Sinensis ID: 047228

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
PNWHNTKHDSVFLIFLSVPISFKHPHTHFCQLRHVTCCNNLNTLNIPLSIFVPRPLRRERKAVIFRYREKQIRRFGHYSIQILLVVDFCYSKQSMVMTVAYPKKAVSLTEKVLQRVYGNHSTSSSSNLGCSFDSDDDNEEDGESTVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQ
cccccccccEEEEEEEEccccccccccccccccccccccccccccccEEEEccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccccHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHcccccccEEEEEEccccccHHHHHHHHHHHHHHHccccEEEEEEEcccccccccHHHHHHHHHHHHHcHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccHHHHHcccc
ccccccccccEEEEEEEccEEcccccccEEEEEEEEccccccccccccEEEccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEEEEEcccccEEEEEcccccccHHHHHHHHHHHccccccEcccccccccccccccccccccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEEcccccccccHHccHHHHHHHHHcccHEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccHccccHHHHccc
pnwhntkhdsVFLIFLSvpisfkhphthfcqlrhVTCCnnlntlniplsifvprplRRERKAVIFRYREKQIRRFGHYSIQILLVVDFCYSKQSMVMTVAYPKKAVSLTEKVLQRVygnhstssssnlgcsfdsdddneedgeSTVELMQIGAERTKNVLILMSdtggghrasAEAIRDAFKIEFGDEYRIFVKDVCKEyagwplndmERSYKFMVKHVQLWKVAfhstspkwiHSCYLAAMAAYYAKEVEAGlmeykpdiiisvhplmqhiplwvlkwq
pnwhntkhdsVFLIFLSVPISFKHPHTHFCQLRHVTCCNNLNTLniplsifvprplrRERKAVIFRYrekqirrfghySIQILLVVDFCYSKQSMVMTVAYPKKAVSLTEKVLQRVYGnhstssssnlgcsfDSDDDNEEDGESTVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQ
PNWHNTKHDSVFLIFLSVPISFKHPHTHFCQLRHVTCCNNLNTLNIPLSIFVPRPLRRERKAVIFRYREKQIRRFGHYSIQILLVVDFCYSKQSMVMTVAYPKKAVSLTEKVLQRVYGNHSTSSSSNLGCsfdsdddneedgesTVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQ
*******HDSVFLIFLSVPISFKHPHTHFCQLRHVTCCNNLNTLNIPLSIFVPRPLRRERKAVIFRYREKQIRRFGHYSIQILLVVDFCYSKQSMVMTVAYPKKAVSLTEKVLQRVYG*********************************GAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKW*
******KHDSVFLIFLSVPISFKHPHTHFCQLRHVTCCNNLNTLNIPLSIFVPRPLRRERKAVIFRYREK*****GHYSIQILLVVDFCYS****************LTEKVLQRVYG*****************************************LILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKW*
********DSVFLIFLSVPISFKHPHTHFCQLRHVTCCNNLNTLNIPLSIFVPRPLRRERKAVIFRYREKQIRRFGHYSIQILLVVDFCYSKQSMVMTVAYPKKAVSLTEKVLQRVY*********NLGCSF*************VELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQ
**W*NTKHDSVFLIFLSVPISFKHPHTHFCQLRHVTCCNNLNTLNIPLSIFVPRPLRRERKAVIFRYREKQIRRFGHYSIQILLVVDFCYSKQSMVMTVAYPKKAVSLTEKVLQRVYGNHSTSSS*****************************RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQ
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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PNWHNTKHDSVFLIFLSVPISFKHPHTHFCQLRHVTCCNNLNTLNIPLSIFVPRPLRRERKAVIFRYREKQIRRFGHYSIQILLVVDFCYSKQSMVMTVAYPKKAVSLTEKVLQRVYGNHSTSSSSNLGCSFDSDDDNEEDGESTVELMQIGAERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLKWQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query280 2.2.26 [Sep-21-2011]
O82730 468 Monogalactosyldiacylglyce yes no 0.621 0.371 0.765 7e-72
Q9SI93 465 Monogalactosyldiacylglyce no no 0.660 0.397 0.673 1e-71
Q0DWQ1 508 Probable monogalactosyldi yes no 0.539 0.297 0.763 2e-67
Q6UTZ2 469 Probable monogalactosyldi yes no 0.657 0.392 0.589 1e-58
A2YTP9 469 Probable monogalactosyldi N/A no 0.657 0.392 0.589 2e-58
O81770 533 Monogalactosyldiacylglyce no no 0.567 0.298 0.512 4e-44
P93115 525 Monogalactosyldiacylglyce N/A no 0.546 0.291 0.5 2e-41
Q9SM44 522 Monogalactosyldiacylglyce N/A no 0.553 0.296 0.493 3e-41
Q9FZL3 535 Probable monogalactosyldi N/A no 0.489 0.256 0.535 6e-41
Q9FZL4 530 Probable monogalactosyldi no no 0.45 0.237 0.571 4e-40
>sp|O82730|MGDG2_ARATH Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=MGD2 PE=1 SV=1 Back     alignment and function desciption
 Score =  270 bits (691), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 144/188 (76%), Positives = 157/188 (83%), Gaps = 14/188 (7%)

Query: 106 VSLTEKVLQRVYGNHSTSSSSNLG-------------CSFDSDDDNEEDGESTVELMQIG 152
           ++L EKVL+RVYG   ++ S   G                 S DD +ED ES++EL+QIG
Sbjct: 6   MALAEKVLERVYGTSKSAVSVTSGDGEKTHRHTHHHIHRIKSYDDIDED-ESSLELIQIG 64

Query: 153 AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSY 212
           AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGD+YR+ VKDV KEY GWPLNDMERSY
Sbjct: 65  AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRVIVKDVWKEYTGWPLNDMERSY 124

Query: 213 KFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHI 272
           KFMVKHVQLWKVAFHSTSPKWIHSCYLAA+AAYYAKEVEAGLMEYKP+IIISVHPLMQHI
Sbjct: 125 KFMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPEIIISVHPLMQHI 184

Query: 273 PLWVLKWQ 280
           PLWVLKWQ
Sbjct: 185 PLWVLKWQ 192
Involved in the synthesis of the major structural component of photosynthetic membranes and in the chloroplast envelope biogenesis. Can use both prokaryotic (18:1/16:0) or eukaryotic (18:2/18:2) 1,2-diacylglycerol species, but operates with some preference for the eukaryotic one.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 4EC: 6
>sp|Q9SI93|MGDG3_ARATH Monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Arabidopsis thaliana GN=MGD3 PE=1 SV=2 Back     alignment and function description
>sp|Q0DWQ1|MGDG3_ORYSJ Probable monogalactosyldiacylglycerol synthase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD3 PE=3 SV=2 Back     alignment and function description
>sp|Q6UTZ2|MGDG2_ORYSJ Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=MGD2 PE=2 SV=2 Back     alignment and function description
>sp|A2YTP9|MGDG2_ORYSI Probable monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Oryza sativa subsp. indica GN=MGD2 PE=3 SV=2 Back     alignment and function description
>sp|O81770|MGDG1_ARATH Monogalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=MGD1 PE=1 SV=1 Back     alignment and function description
>sp|P93115|MGDG_CUCSA Monogalactosyldiacylglycerol synthase, chloroplastic OS=Cucumis sativus PE=1 SV=1 Back     alignment and function description
>sp|Q9SM44|MGDG_SPIOL Monogalactosyldiacylglycerol synthase, chloroplastic OS=Spinacia oleracea GN=MGD A PE=1 SV=1 Back     alignment and function description
>sp|Q9FZL3|MGDG_TOBAC Probable monogalactosyldiacylglycerol synthase, chloroplastic OS=Nicotiana tabacum GN=MGD A PE=2 SV=1 Back     alignment and function description
>sp|Q9FZL4|MGDG_SOYBN Probable monogalactosyldiacylglycerol synthase, chloroplastic OS=Glycine max GN=MGD A PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query280
297808107 468 hypothetical protein ARALYDRAFT_488950 [ 0.621 0.371 0.781 4e-71
449443037 457 PREDICTED: monogalactosyldiacylglycerol 0.646 0.396 0.777 1e-70
30687800 468 Monogalactosyldiacylglycerol synthase 2 0.621 0.371 0.765 4e-70
242063406 501 hypothetical protein SORBIDRAFT_04g03624 0.592 0.331 0.748 8e-70
18397057 465 Monogalactosyldiacylglycerol synthase 3 0.660 0.397 0.673 9e-70
186500120362 Monogalactosyldiacylglycerol synthase 3 0.660 0.511 0.673 1e-69
226494375 501 LOC100281388 [Zea mays] gi|195613720|gb| 0.592 0.331 0.742 2e-69
255579843 470 1,2-diacylglycerol 3-beta-galactosyltran 0.657 0.391 0.770 2e-68
147852595 437 hypothetical protein VITISV_009935 [Viti 0.632 0.405 0.768 3e-68
225446219 453 PREDICTED: monogalactosyldiacylglycerol 0.632 0.390 0.763 5e-68
>gi|297808107|ref|XP_002871937.1| hypothetical protein ARALYDRAFT_488950 [Arabidopsis lyrata subsp. lyrata] gi|297317774|gb|EFH48196.1| hypothetical protein ARALYDRAFT_488950 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
 Score =  274 bits (700), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 147/188 (78%), Positives = 159/188 (84%), Gaps = 14/188 (7%)

Query: 106 VSLTEKVLQRVYGNHSTSSSSNLGCS-------------FDSDDDNEEDGESTVELMQIG 152
           +SL EKVL+RVYG   ++ S   G S               S DD++ED ES++EL+QIG
Sbjct: 6   MSLAEKVLERVYGTSKSAVSVAGGESEKTHRHTHHHIHRSKSYDDSDED-ESSMELVQIG 64

Query: 153 AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSY 212
           AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGD+YRI VKDV KEY GWPLNDMERSY
Sbjct: 65  AERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRIIVKDVWKEYTGWPLNDMERSY 124

Query: 213 KFMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHI 272
           KFMVKHVQLWKVAFHSTSPKWIHSCYLAA+AAYYAKEVEAGLMEYKP+IIISVHPLMQHI
Sbjct: 125 KFMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPEIIISVHPLMQHI 184

Query: 273 PLWVLKWQ 280
           PLWVLKWQ
Sbjct: 185 PLWVLKWQ 192

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|449443037|ref|XP_004139287.1| PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Cucumis sativus] gi|449518459|ref|XP_004166259.1| PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|30687800|ref|NP_568394.2| Monogalactosyldiacylglycerol synthase 2 [Arabidopsis thaliana] gi|75100766|sp|O82730.1|MGDG2_ARATH RecName: Full=Monogalactosyldiacylglycerol synthase 2, chloroplastic; Short=AtMGD2; AltName: Full=MGDG synthase type B; Flags: Precursor gi|3367638|emb|CAA04005.1| monogalactosyldiacylglycerol synthase [Arabidopsis thaliana] gi|332005457|gb|AED92840.1| Monogalactosyldiacylglycerol synthase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|242063406|ref|XP_002452992.1| hypothetical protein SORBIDRAFT_04g036240 [Sorghum bicolor] gi|241932823|gb|EES05968.1| hypothetical protein SORBIDRAFT_04g036240 [Sorghum bicolor] Back     alignment and taxonomy information
>gi|18397057|ref|NP_565352.1| Monogalactosyldiacylglycerol synthase 3 [Arabidopsis thaliana] gi|75206061|sp|Q9SI93.2|MGDG3_ARATH RecName: Full=Monogalactosyldiacylglycerol synthase 3, chloroplastic; Short=AtMGD3; AltName: Full=MGDG synthase type C; Flags: Precursor gi|9927295|dbj|BAB12041.1| MGDG synthase type C [Arabidopsis thaliana] gi|20198177|gb|AAD28678.2| putative monogalactosyldiacylglycerol synthase [Arabidopsis thaliana] gi|111074182|gb|ABH04464.1| At2g11810 [Arabidopsis thaliana] gi|330251089|gb|AEC06183.1| Monogalactosyldiacylglycerol synthase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|186500120|ref|NP_001118301.1| Monogalactosyldiacylglycerol synthase 3 [Arabidopsis thaliana] gi|330251090|gb|AEC06184.1| Monogalactosyldiacylglycerol synthase 3 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|226494375|ref|NP_001147778.1| LOC100281388 [Zea mays] gi|195613720|gb|ACG28690.1| MGD2 [Zea mays] gi|413939354|gb|AFW73905.1| MGD2 [Zea mays] Back     alignment and taxonomy information
>gi|255579843|ref|XP_002530758.1| 1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis] gi|223529674|gb|EEF31618.1| 1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147852595|emb|CAN81686.1| hypothetical protein VITISV_009935 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225446219|ref|XP_002263443.1| PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query280
TAIR|locus:2149274 468 MGD2 "monogalactosyldiacylglyc 0.625 0.373 0.732 2.1e-68
TAIR|locus:2052662 465 MGDC "monogalactosyldiacylglyc 0.660 0.397 0.658 6e-64
TAIR|locus:2124844 533 MGD1 "monogalactosyl diacylgly 0.457 0.240 0.585 2.9e-39
UNIPROTKB|Q7XZR6 358 OsMGD "Putative monogalactosyl 0.260 0.203 0.835 9.8e-32
TAIR|locus:2149274 MGD2 "monogalactosyldiacylglycerol synthase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
 Identities = 137/187 (73%), Positives = 149/187 (79%)

Query:   106 VSLTEKVLQRVYGNHSTSSSSNLG------------CXXXXXXXXXXXXXXTVELMQIGA 153
             ++L EKVL+RVYG   ++ S   G                           ++EL+QIGA
Sbjct:     6 MALAEKVLERVYGTSKSAVSVTSGDGEKTHRHTHHHIHRIKSYDDIDEDESSLELIQIGA 65

Query:   154 ERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYK 213
             ERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGD+YR+ VKDV KEY GWPLNDMERSYK
Sbjct:    66 ERTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDKYRVIVKDVWKEYTGWPLNDMERSYK 125

Query:   214 FMVKHVQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIP 273
             FMVKHVQLWKVAFHSTSPKWIHSCYLAA+AAYYAKEVEAGLMEYKP+IIISVHPLMQHIP
Sbjct:   126 FMVKHVQLWKVAFHSTSPKWIHSCYLAAIAAYYAKEVEAGLMEYKPEIIISVHPLMQHIP 185

Query:   274 LWVLKWQ 280
             LWVLKWQ
Sbjct:   186 LWVLKWQ 192
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009247 "glycolipid biosynthetic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
GO:0030259 "lipid glycosylation" evidence=IEA
GO:0009707 "chloroplast outer membrane" evidence=IDA;TAS
GO:0016036 "cellular response to phosphate starvation" evidence=IGI;IEP;RCA
GO:0019375 "galactolipid biosynthetic process" evidence=RCA;TAS
GO:0046509 "1,2-diacylglycerol 3-beta-galactosyltransferase activity" evidence=IDA
GO:0035250 "UDP-galactosyltransferase activity" evidence=TAS
GO:0006631 "fatty acid metabolic process" evidence=IGI
GO:0019374 "galactolipid metabolic process" evidence=IGI
GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=RCA
TAIR|locus:2052662 MGDC "monogalactosyldiacylglycerol synthase type C" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124844 MGD1 "monogalactosyl diacylglycerol synthase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q7XZR6 OsMGD "Putative monogalactosyldiacylglycerol synthase" [Oryza sativa Indica Group (taxid:39946)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q0DWQ1MGDG3_ORYSJ2, ., 4, ., 1, ., 4, 60.76310.53920.2972yesno
O82730MGDG2_ARATH2, ., 4, ., 1, ., 4, 60.76590.62140.3717yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.6__2084__AT5G20410.1
annotation not avaliable (468 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
Al_scaffold_0006_88
annotation not avaliable (518 aa)
   • •• 0.549

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query280
PLN02605 382 PLN02605, PLN02605, monogalactosyldiacylglycerol s 4e-83
pfam06925169 pfam06925, MGDG_synth, Monogalactosyldiacylglycero 6e-44
PRK13609 380 PRK13609, PRK13609, diacylglycerol glucosyltransfe 0.004
>gnl|CDD|215325 PLN02605, PLN02605, monogalactosyldiacylglycerol synthase Back     alignment and domain information 
 Score =  254 bits (650), Expect = 4e-83
 Identities = 82/122 (67%), Positives = 103/122 (84%)

Query: 159 VLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKH 218
           VLILMSDTGGGHRASAEAI+DAF++EFGDEY++F+ D+ KE+  WP N + RSYKF+VKH
Sbjct: 1   VLILMSDTGGGHRASAEAIKDAFQLEFGDEYQVFIVDLWKEHTPWPFNQLPRSYKFLVKH 60

Query: 219 VQLWKVAFHSTSPKWIHSCYLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLK 278
            QLWK+ +H T+P+ IH  Y AA +A+ A+EV  GLM+YKPDII+SVHPLMQH+PL VL+
Sbjct: 61  PQLWKMTYHGTNPRLIHQSYFAATSAFVAREVAKGLMKYKPDIIVSVHPLMQHVPLRVLR 120

Query: 279 WQ 280
           WQ
Sbjct: 121 WQ 122

Length = 382
>gnl|CDD|219230 pfam06925, MGDG_synth, Monogalactosyldiacylglycerol (MGDG) synthase Back     alignment and domain information
>gnl|CDD|237445 PRK13609, PRK13609, diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 280
PLN02605 382 monogalactosyldiacylglycerol synthase 99.92
PRK13608 391 diacylglycerol glucosyltransferase; Provisional 99.9
PF06925169 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) sy 99.9
PRK13609 380 diacylglycerol glucosyltransferase; Provisional 99.77
COG0707 357 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami 97.98
TIGR01133 348 murG undecaprenyldiphospho-muramoylpentapeptide be 96.59
PF13528 318 Glyco_trans_1_3: Glycosyl transferase family 1 96.59
PRK00726 357 murG undecaprenyldiphospho-muramoylpentapeptide be 96.58
cd03823 359 GT1_ExpE7_like This family is most closely related 96.48
cd04951 360 GT1_WbdM_like This family is most closely related 96.37
cd03785 350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 96.19
TIGR00661 321 MJ1255 conserved hypothetical protein. This model 96.13
cd01635 229 Glycosyltransferase_GTB_type Glycosyltransferases 96.13
cd03825 365 GT1_wcfI_like This family is most closely related 95.98
cd03811 353 GT1_WabH_like This family is most closely related 95.76
cd03817 374 GT1_UGDG_like This family is most closely related 95.3
TIGR00215 385 lpxB lipid-A-disaccharide synthase. Lipid-A precur 94.85
cd03798 377 GT1_wlbH_like This family is most closely related 94.66
cd04962 371 GT1_like_5 This family is most closely related to 94.51
PRK00025 380 lpxB lipid-A-disaccharide synthase; Reviewed 94.47
cd03801 374 GT1_YqgM_like This family is most closely related 94.01
PRK12446 352 undecaprenyldiphospho-muramoylpentapeptide beta-N- 93.85
cd03820 348 GT1_amsD_like This family is most closely related 93.19
cd03799 355 GT1_amsK_like This is a family of GT1 glycosyltran 92.72
cd03794 394 GT1_wbuB_like This family is most closely related 92.55
cd03784 401 GT1_Gtf_like This family includes the Gtfs, a grou 91.27
TIGR03590 279 PseG pseudaminic acid biosynthesis-associated prot 91.1
cd03814 364 GT1_like_2 This family is most closely related to 89.98
COG4671 400 Predicted glycosyl transferase [General function p 88.92
PRK06756148 flavodoxin; Provisional 88.75
PLN02871 465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 88.69
cd03808 359 GT1_cap1E_like This family is most closely related 88.34
PRK05568142 flavodoxin; Provisional 86.88
PRK05569141 flavodoxin; Provisional 86.64
cd03807 365 GT1_WbnK_like This family is most closely related 86.4
PRK09922 359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 86.17
cd03812 358 GT1_CapH_like This family is most closely related 85.92
PRK06703151 flavodoxin; Provisional 85.65
PF03358152 FMN_red: NADPH-dependent FMN reductase; InterPro: 85.42
cd03802 335 GT1_AviGT4_like This family is most closely relate 85.39
cd03822 366 GT1_ecORF704_like This family is most closely rela 85.02
PRK13556208 azoreductase; Provisional 85.02
PRK03767200 NAD(P)H:quinone oxidoreductase; Provisional 83.76
PRK12767 326 carbamoyl phosphate synthase-like protein; Provisi 82.23
COG0716151 FldA Flavodoxins [Energy production and conversion 81.89
PRK00170201 azoreductase; Reviewed 81.54
PRK09271160 flavodoxin; Provisional 80.47
PRK01355199 azoreductase; Reviewed 80.36
PRK06849 389 hypothetical protein; Provisional 80.35
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information 
Probab=99.92  E-value=7.7e-25  Score=205.13  Aligned_cols=119  Identities=66%  Similarity=1.190  Sum_probs=102.2

Q ss_pred             EEEEEcCCCchHHHHHHHHHHHHhhhcCCCeEEEEEeccccccCCchhhHHHHHHHHHhHHH-HHHHHHHhcCCCchhhH
Q 047228          159 VLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQ-LWKVAFHSTSPKWIHSC  237 (280)
Q Consensus       159 VLILSAStGgGH~qAAeAIaEAL~~~~p~~veV~IVD~Le~isP~l~~li~~~Yl~~Vr~~P-LY~~~Y~~T~~~~~~s~  237 (280)
                      |||||+|+|+||++||+||+|+|++.++++++|+++|++++.+|++.+.+.++|..++++ | +|+++|+.++.++....
T Consensus         1 ilils~~~G~GH~~aa~al~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~Y~~~~~~-p~~~~~~y~~~~~~~~~~~   79 (382)
T PLN02605          1 VLILMSDTGGGHRASAEAIKDAFQLEFGDEYQVFIVDLWKEHTPWPFNQLPRSYKFLVKH-PQLWKMTYHGTNPRLIHQS   79 (382)
T ss_pred             CEEEEEcCCcChHHHHHHHHHHHHhhcCCCeeEEEEehhhhcCcchhhhHHHHHHHHhhC-HHHHHHHHHhcCchhhhHH
Confidence            699999999999999999999998765556899999999999999988899999999988 8 99999998865444444


Q ss_pred             HHHHHHHHHHHHHHHHHhhhCCCEEEeCCcchhhHHHHhhh
Q 047228          238 YLAAMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWVLK  278 (280)
Q Consensus       238 l~~~l~~l~~rkL~~lIee~kPDVIISTHPfpa~VlL~vLk  278 (280)
                      ....+...+.+++.++|++++||+||||||+++++++++++
T Consensus        80 ~~~~~~~~~~~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~  120 (382)
T PLN02605         80 YFAATSAFVAREVAKGLMKYKPDIIVSVHPLMQHVPLRVLR  120 (382)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCcCEEEEeCcCcccCHHHHHH
Confidence            44456677789999999999999999999998776655544

>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [] Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>TIGR00661 MJ1255 conserved hypothetical protein Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR00215 lpxB lipid-A-disaccharide synthase Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin Back     alignment and domain information
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>COG4671 Predicted glycosyl transferase [General function prediction only] Back     alignment and domain information
>PRK06756 flavodoxin; Provisional Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK05568 flavodoxin; Provisional Back     alignment and domain information
>PRK05569 flavodoxin; Provisional Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK06703 flavodoxin; Provisional Back     alignment and domain information
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1 Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK13556 azoreductase; Provisional Back     alignment and domain information
>PRK03767 NAD(P)H:quinone oxidoreductase; Provisional Back     alignment and domain information
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional Back     alignment and domain information
>COG0716 FldA Flavodoxins [Energy production and conversion] Back     alignment and domain information
>PRK00170 azoreductase; Reviewed Back     alignment and domain information
>PRK09271 flavodoxin; Provisional Back     alignment and domain information
>PRK01355 azoreductase; Reviewed Back     alignment and domain information
>PRK06849 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query280
3oti_A 398 CALG3; calicheamicin, TDP, structural genomics, PS 97.54
3s2u_A 365 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape 97.37
4amg_A 400 Snogd; transferase, polyketide biosynthesis, GT1 f 97.34
3otg_A 412 CALG1; calicheamicin, TDP, structural genomics, PS 97.13
4fzr_A 398 SSFS6; structural genomics, PSI-biology, protein s 97.08
1f0k_A 364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 96.79
2p6p_A 384 Glycosyl transferase; X-RAY-diffraction,urdamycina 96.58
3tsa_A 391 SPNG, NDP-rhamnosyltransferase; glycosyltransferas 96.5
3rsc_A 415 CALG2; TDP, enediyne, structural genomics, PSI-2, 96.48
2gek_A 406 Phosphatidylinositol mannosyltransferase (PIMA); G 96.35
2x6q_A 416 Trehalose-synthase TRET; biosynthetic protein; 2.2 95.59
3ia7_A 402 CALG4; glycosysltransferase, calicheamicin, enediy 95.52
2iyf_A 430 OLED, oleandomycin glycosyltransferase; antibiotic 95.35
2iya_A 424 OLEI, oleandomycin glycosyltransferase; carbohydra 94.43
2a5l_A200 Trp repressor binding protein WRBA; APC5760, PA094 94.1
2iuy_A 342 Avigt4, glycosyltransferase; antibiotics, family G 93.52
3okp_A 394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 92.88
3f6r_A148 Flavodoxin; FMN binding, oxidized, electron transp 92.74
2zki_A199 199AA long hypothetical Trp repressor binding prot 92.67
1ydg_A211 Trp repressor binding protein WRBA; tetramer, stru 92.22
1iir_A 415 Glycosyltransferase GTFB; rossmann fold; 1.80A {Am 92.15
3b6i_A198 Flavoprotein WRBA; flavoproteins, NADH:quinone oxi 91.71
2ark_A188 Flavodoxin; FMN, structural genomics, PSI, structu 91.5
3r6w_A212 FMN-dependent NADH-azoreductase 1; nitrofurazone, 89.95
1t5b_A201 Acyl carrier protein phosphodiesterase; structural 89.54
3p0r_A211 Azoreductase; structural genomics, center for stru 89.3
2hpv_A208 FMN-dependent NADH-azoreductase; structural genomi 89.0
2vzf_A197 NADH-dependent FMN reductase; oxidoreductase; 2.50 88.71
1v4v_A 376 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t 88.47
3beo_A 375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 88.22
3fro_A 439 GLGA glycogen synthase; glycosyltransferase family 87.53
3oy2_A 413 Glycosyltransferase B736L; rossmann fold, GDP-mann 87.46
3fni_A159 Putative diflavin flavoprotein A 3; alpha-beta pro 87.41
1f4p_A147 Flavodoxin; electron transport, flavoprotein, FMN, 86.71
3hly_A161 Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein 86.52
3u7i_A223 FMN-dependent NADH-azoreductase 1; structural geno 86.47
2q62_A247 ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobi 86.15
1vgv_A 384 UDP-N-acetylglucosamine 2-epimerase; structural ge 85.94
2hna_A147 Protein MIOC, flavodoxin; alpha-beta sandwich, fla 85.92
1ykg_A167 SIR-FP, sulfite reductase [NADPH] flavoprotein alp 85.37
2iw1_A 374 Lipopolysaccharide core biosynthesis protein RFAG; 85.36
1sqs_A 242 Conserved hypothetical protein; structural genomic 83.02
3f2v_A192 General stress protein 14; alpha-beta protein., st 81.78
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A* Back     alignment and structure
Probab=97.54  E-value=0.00039  Score=62.96  Aligned_cols=38  Identities=21%  Similarity=0.251  Sum_probs=31.3

Q ss_pred             ccceEEEEEcCCCchHHHHHHHHHHHHhhhcCCCeEEEEEec
Q 047228          155 RTKNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDV  196 (280)
Q Consensus       155 ~~kRVLILSAStGgGH~qAAeAIaEAL~~~~p~~veV~IVD~  196 (280)
                      ++|||||++.+ |.||...+.+|.++|.++   +.+|.++..
T Consensus        19 ~~MrIl~~~~~-~~Ghv~~~~~La~~L~~~---GheV~v~~~   56 (398)
T 3oti_A           19 RHMRVLFVSSP-GIGHLFPLIQLAWGFRTA---GHDVLIAVA   56 (398)
T ss_dssp             CCCEEEEECCS-SHHHHGGGHHHHHHHHHT---TCEEEEEES
T ss_pred             hcCEEEEEcCC-CcchHhHHHHHHHHHHHC---CCEEEEecc
Confidence            34689999876 999999999999999876   457777664
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A* Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A* Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae} Back     alignment and structure
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A* Back     alignment and structure
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A* Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora} Back     alignment and structure
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus} Back     alignment and structure
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A* Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A* Back     alignment and structure
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii} Back     alignment and structure
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A* Back     alignment and structure
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5 Back     alignment and structure
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A* Back     alignment and structure
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8 Back     alignment and structure
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A* Back     alignment and structure
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A* Back     alignment and structure
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis} Back     alignment and structure
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis} Back     alignment and structure
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A* Back     alignment and structure
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A Back     alignment and structure
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ... Back     alignment and structure
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301} Back     alignment and structure
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis} Back     alignment and structure
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti} Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A Back     alignment and structure
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2 Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A* Back     alignment and structure
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query280
d1f0ka_ 351 Peptidoglycan biosynthesis glycosyltransferase Mur 98.23
d1vmea1148 ROO-like flavoprotein TM0755, C-terminal domain {T 91.85
d1e5da1152 Rubredoxin oxygen:oxidoreductase (ROO), C-terminal 91.33
d1ydga_201 Trp repressor binding protein WrbA {Deinococcus ra 90.31
d1ycga1149 Nitric oxide reductase C-terminal domain {Moorella 89.01
d1f4pa_147 Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]} 88.04
d2arka1184 Flavodoxin FldA {Aquifex aeolicus [TaxId: 63363]} 87.34
d1iira_ 401 UDP-glucosyltransferase GtfB {Amycolatopsis orient 87.11
d2a5la1196 Trp repressor binding protein WrbA {Pseudomonas ae 83.9
d2qwxa1 230 Quinone reductase type 2 (menadione reductase) {Hu 82.63
d1sqsa_ 232 Hypothetical protein SP1951 {(Streptococcus pneumo 81.16
d1rrva_ 401 TDP-vancosaminyltransferase GftD {Amycolatopsis or 80.79
d1pn3a_ 391 TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi 80.38
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=98.23  E-value=5.4e-07  Score=76.24  Aligned_cols=104  Identities=16%  Similarity=0.183  Sum_probs=60.4

Q ss_pred             ceEEEEEcCCCchHHHHHHHHHHHHhhhcCCCeEEEEEeccccccCCchhhHHHHHHHHHhHHHHHHHHHHhcC---CCc
Q 047228          157 KNVLILMSDTGGGHRASAEAIRDAFKIEFGDEYRIFVKDVCKEYAGWPLNDMERSYKFMVKHVQLWKVAFHSTS---PKW  233 (280)
Q Consensus       157 kRVLILSAStGgGH~qAAeAIaEAL~~~~p~~veV~IVD~Le~isP~l~~li~~~Yl~~Vr~~PLY~~~Y~~T~---~~~  233 (280)
                      |||||+|+.+| ||.++|.||+++|.++   +.+|..+...+..           +...+.... |...+....   ...
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~---G~eV~~i~~~~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~   64 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQ---GWQVRWLGTADRM-----------EADLVPKHG-IEIDFIRISGLRGKG   64 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTT---TCEEEEEECTTST-----------HHHHGGGGT-CEEEECCCCCCTTCC
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhC---CCEEEEEEeCCcc-----------hhhcccccC-CcEEEEECCCcCCCC
Confidence            69999998777 9999999999999775   4577766533211           111111110 000000000   111


Q ss_pred             hhhHHHH-HHHHHHHHHHHHHHhhhCCCEEEeCCcchhhHHHHh
Q 047228          234 IHSCYLA-AMAAYYAKEVEAGLMEYKPDIIISVHPLMQHIPLWV  276 (280)
Q Consensus       234 ~~s~l~~-~l~~l~~rkL~~lIee~kPDVIISTHPfpa~VlL~v  276 (280)
                      ....... ...........+++++++||++++|++.....+++.
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  108 (351)
T d1f0ka_          65 IKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLA  108 (351)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHH
T ss_pred             HHHHHHHHHHHHHhHHHHHHHhhccccceeeecccchhhhhhhh
Confidence            1111111 112234467888999999999999998877666543
>d1vmea1 c.23.5.1 (A:251-398) ROO-like flavoprotein TM0755, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e5da1 c.23.5.1 (A:251-402) Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain {Desulfovibrio gigas [TaxId: 879]} Back     information, alignment and structure
>d1ydga_ c.23.5.8 (A:) Trp repressor binding protein WrbA {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1ycga1 c.23.5.1 (A:251-399) Nitric oxide reductase C-terminal domain {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
>d1f4pa_ c.23.5.1 (A:) Flavodoxin {Desulfovibrio vulgaris [TaxId: 881]} Back     information, alignment and structure
>d2arka1 c.23.5.8 (A:1-184) Flavodoxin FldA {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d2a5la1 c.23.5.8 (A:3-198) Trp repressor binding protein WrbA {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d2qwxa1 c.23.5.3 (A:1-230) Quinone reductase type 2 (menadione reductase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sqsa_ c.23.5.5 (A:) Hypothetical protein SP1951 {(Streptococcus pneumoniae) [TaxId: 1313]} Back     information, alignment and structure
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} Back     information, alignment and structure