Citrus Sinensis ID: 047340

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60-------
Protein Sequence
MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATGMNK
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Secondary Structure Prediction (SSPRO)
cccccccccHcccHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Coil and Loop (DISEMBL)
MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSvknatgmnk
Flexible Loop (DISEMBL)
madnsqkmsyqageAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKaqgaadsvknatgmnk
Low Complexity Region (SEG)
MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATGMNK
Disordered region (IsUnstruct)
*******************************************************************
Disordered Region (DISOPRED)
************************************************************NAT****
Disordered Region (DISEMBL)
***********************NTMMD***************************************
Disordered Region (DISPRO)
*******************************************************************
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATGMNK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
255584312	67	conserved hypothetical protein [Ricinus	1.0	1.0	0.820	1e-20
449469357	67	PREDICTED: uncharacterized protein LOC10	1.0	1.0	0.776	1e-19
224127564	67	predicted protein [Populus trichocarpa]	1.0	1.0	0.746	1e-19
224077550	67	predicted protein [Populus trichocarpa]	1.0	1.0	0.746	4e-19
224077554	67	predicted protein [Populus trichocarpa]	1.0	1.0	0.746	5e-19
224077564	67	predicted protein [Populus trichocarpa]	1.0	1.0	0.731	9e-19
21593307	67	pollen coat-like protein [Arabidopsis th	1.0	1.0	0.716	1e-18
15240998	67	Late embryogenesis abundant protein (LEA	1.0	1.0	0.716	2e-18
116831549	68	unknown [Arabidopsis thaliana]	1.0	0.985	0.716	2e-18
224075477	67	predicted protein [Populus trichocarpa]	1.0	1.0	0.731	3e-18

>gi|255584312|ref|XP_002532892.1| conserved hypothetical protein [Ricinus communis] gi|223527352|gb|EEF29497.1| conserved hypothetical protein [Ricinus communis]

 Score =  103 bits (258), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/67 (82%), Positives = 61/67 (91%)

Query: 1  MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
          MADNSQKM+Y AGEAKGQ QEKA+ MMDKAGN AQSAK+SM +AG Q+KAKAQGAAD+VK
Sbjct: 1  MADNSQKMAYHAGEAKGQTQEKASNMMDKAGNVAQSAKESMQEAGNQMKAKAQGAADAVK 60

Query: 61 NATGMNK 67
          NATGMNK
Sbjct: 61 NATGMNK 67

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449469357|ref|XP_004152387.1| PREDICTED: uncharacterized protein LOC101221346 [Cucumis sativus]

 Score =  100 bits (250), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/67 (77%), Positives = 62/67 (92%)

Query: 1  MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
          MADNS+KMSY  GEAKGQAQEKA+ +MDKAG+ AQSAK+SM +AG+Q+KAKAQGAAD+VK
Sbjct: 1  MADNSEKMSYHIGEAKGQAQEKASNLMDKAGDTAQSAKESMQEAGQQMKAKAQGAADAVK 60

Query: 61 NATGMNK 67
          +ATGMNK
Sbjct: 61 DATGMNK 67

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127564|ref|XP_002329309.1| predicted protein [Populus trichocarpa] gi|222870763|gb|EEF07894.1| predicted protein [Populus trichocarpa]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 61/67 (91%)

Query: 1  MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
          MADN+QKMS+QAGEAKGQ QEKA+T+MD+AGNAAQSAK+S+ +AG+QV + AQGA + VK
Sbjct: 1  MADNTQKMSFQAGEAKGQVQEKASTLMDRAGNAAQSAKESVQEAGQQVMSTAQGAVEGVK 60

Query: 61 NATGMNK 67
          NATGMNK
Sbjct: 61 NATGMNK 67

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077550|ref|XP_002305298.1| predicted protein [Populus trichocarpa] gi|222848262|gb|EEE85809.1| predicted protein [Populus trichocarpa]

 Score = 98.6 bits (244), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 60/67 (89%)

Query: 1  MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
          MADN+QKMSYQAGE KGQAQEKA+ +MD+A NAAQSAK+S+ +AG+QV+ KAQGA + VK
Sbjct: 1  MADNTQKMSYQAGEVKGQAQEKASNLMDRADNAAQSAKESVQEAGQQVREKAQGAVEGVK 60

Query: 61 NATGMNK 67
          NATGMNK
Sbjct: 61 NATGMNK 67

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077554|ref|XP_002305300.1| predicted protein [Populus trichocarpa] gi|224077558|ref|XP_002305301.1| predicted protein [Populus trichocarpa] gi|222848264|gb|EEE85811.1| predicted protein [Populus trichocarpa] gi|222848265|gb|EEE85812.1| predicted protein [Populus trichocarpa]

 Score = 98.6 bits (244), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 50/67 (74%), Positives = 60/67 (89%)

Query: 1  MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
          MADN+QKMSYQAGE KGQAQEKA+ +MD+A NAAQSAK+S+ +AG+QV+ KAQGA + VK
Sbjct: 1  MADNTQKMSYQAGETKGQAQEKASNLMDRADNAAQSAKESVQEAGQQVREKAQGAVEGVK 60

Query: 61 NATGMNK 67
          NATGMNK
Sbjct: 61 NATGMNK 67

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224077564|ref|XP_002305304.1| predicted protein [Populus trichocarpa] gi|222848268|gb|EEE85815.1| predicted protein [Populus trichocarpa]

 Score = 97.4 bits (241), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 60/67 (89%)

Query: 1  MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
          MADN+QKMSY AGEAKGQAQEKA+ +MD+A NAAQSAK+S+ +AG+QV+ K+QGA + VK
Sbjct: 1  MADNTQKMSYHAGEAKGQAQEKASNLMDRADNAAQSAKESVQEAGQQVREKSQGAVEGVK 60

Query: 61 NATGMNK 67
          NATGMNK
Sbjct: 61 NATGMNK 67

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21593307|gb|AAM65256.1| pollen coat-like protein [Arabidopsis thaliana]

 Score = 97.1 bits (240), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 59/67 (88%)

Query: 1  MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
          M+ NSQ +S+QAG+AKGQ QEKA+TMMDKA NAAQSAK+S+ + G+Q+K KAQGA +SVK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLQETGQQIKEKAQGATESVK 60

Query: 61 NATGMNK 67
          NATGMNK
Sbjct: 61 NATGMNK 67

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15240998|ref|NP_198692.1| Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana] gi|10176901|dbj|BAB10133.1| pollen coat protein-like [Arabidopsis thaliana] gi|91806948|gb|ABE66201.1| unknown [Arabidopsis thaliana] gi|111074248|gb|ABH04497.1| At5g38760 [Arabidopsis thaliana] gi|332006974|gb|AED94357.1| Late embryogenesis abundant protein (LEA) family protein [Arabidopsis thaliana]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 59/67 (88%)

Query: 1  MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
          M+ NSQ +S+QAG+AKGQ QEKA+TMMDKA NAAQSAK+S+ + G+Q+K KAQGA +SVK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 NATGMNK 67
          NATGMNK
Sbjct: 61 NATGMNK 67

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116831549|gb|ABK28727.1| unknown [Arabidopsis thaliana]

 Score = 96.7 bits (239), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 48/67 (71%), Positives = 59/67 (88%)

Query: 1  MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
          M+ NSQ +S+QAG+AKGQ QEKA+TMMDKA NAAQSAK+S+ + G+Q+K KAQGA +SVK
Sbjct: 1  MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query: 61 NATGMNK 67
          NATGMNK
Sbjct: 61 NATGMNK 67

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224075477|ref|XP_002335853.1| predicted protein [Populus trichocarpa] gi|224077548|ref|XP_002305297.1| predicted protein [Populus trichocarpa] gi|224077562|ref|XP_002305303.1| predicted protein [Populus trichocarpa] gi|222835948|gb|EEE74369.1| predicted protein [Populus trichocarpa] gi|222848261|gb|EEE85808.1| predicted protein [Populus trichocarpa] gi|222848267|gb|EEE85814.1| predicted protein [Populus trichocarpa]

 Score = 95.9 bits (237), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/67 (73%), Positives = 59/67 (88%)

Query: 1  MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
          MADN+QKMSYQAGE KGQAQEKA+ +MD+A NAAQSAK+S+ +AG+QV+AK Q A + VK
Sbjct: 1  MADNTQKMSYQAGETKGQAQEKASNLMDRADNAAQSAKESVQEAGQQVRAKTQEAVEGVK 60

Query: 61 NATGMNK 67
          NATGMNK
Sbjct: 61 NATGMNK 67

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	67
TAIR|locus:2166630	67	AT5G38760 "AT5G38760" [Arabido	1.0	1.0	0.716	9e-22
TAIR|locus:2164012	67	AT5G53820 "AT5G53820" [Arabido	1.0	1.0	0.582	9.5e-18
TAIR|locus:2076844	68	AT3G02480 "AT3G02480" [Arabido	0.970	0.955	0.661	1.6e-17
TAIR|locus:2146057	66	KIN2 "AT5G15970" [Arabidopsis	0.940	0.954	0.444	5.2e-10
TAIR|locus:2146047	66	KIN1 "AT5G15960" [Arabidopsis	0.940	0.954	0.428	2.9e-09
TAIR|locus:2035109	169	LEA7 "AT1G52690" [Arabidopsis	0.925	0.366	0.396	2.9e-07
TAIR|locus:2093307	225	AT3G15670 "AT3G15670" [Arabido	0.910	0.271	0.380	8e-06
TAIR|locus:2140842	109	UNE15 "AT4G13560" [Arabidopsis	0.985	0.605	0.357	0.0001
TAIR|locus:2823550	96	AT1G15415 "AT1G15415" [Arabido	0.835	0.583	0.377	0.00013

TAIR|locus:2166630 AT5G38760 "AT5G38760" [Arabidopsis thaliana (taxid:3702)]

 Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
 Identities = 48/67 (71%), Positives = 59/67 (88%)

Query:     1 MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
             M+ NSQ +S+QAG+AKGQ QEKA+TMMDKA NAAQSAK+S+ + G+Q+K KAQGA +SVK
Sbjct:     1 MSSNSQNISFQAGQAKGQTQEKASTMMDKASNAAQSAKESLKETGQQIKEKAQGATESVK 60

Query:    61 NATGMNK 67
             NATGMNK
Sbjct:    61 NATGMNK 67

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0019953 "sexual reproduction" evidence=RCA

GO:0048445 "carpel morphogenesis" evidence=RCA

TAIR|locus:2164012 AT5G53820 "AT5G53820" [Arabidopsis thaliana (taxid:3702)]

 Score = 216 (81.1 bits), Expect = 9.5e-18, P = 9.5e-18
 Identities = 39/67 (58%), Positives = 57/67 (85%)

Query:     1 MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
             M++NSQ MS+ AG+AKGQ QEKA+ ++DKA NAAQSAK+S+ + G+Q+K KAQGA++++K
Sbjct:     1 MSNNSQSMSFNAGQAKGQTQEKASNLIDKASNAAQSAKESIQEGGQQLKQKAQGASETIK 60

Query:    61 NATGMNK 67
               TG++K
Sbjct:    61 EKTGISK 67

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0009830 "cell wall modification involved in abscission" evidence=RCA

TAIR|locus:2076844 AT3G02480 "AT3G02480" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 43/65 (66%), Positives = 51/65 (78%)

Query:     3 DNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNA 62
             DN Q  SYQAG+A GQ +EKA  MMDKA +AA SA+DS+ Q G+Q+K KAQGAAD VK+ 
Sbjct:     2 DNKQNASYQAGQATGQTKEKAGGMMDKAKDAAASAQDSLQQTGQQMKEKAQGAADVVKDK 61

Query:    63 TGMNK 67
             TGMNK
Sbjct:    62 TGMNK 66

GO:0003674 "molecular_function" evidence=ND

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009830 "cell wall modification involved in abscission" evidence=RCA

TAIR|locus:2146057 KIN2 "AT5G15970" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 28/63 (44%), Positives = 44/63 (69%)

Query:     5 SQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATG 64
             + K ++QAG+A G+A+EK+N ++DKA +AA +A  S  QAG+ +   A G  + VK+ TG
Sbjct:     4 TNKNAFQAGQAAGKAEEKSNVLLDKAKDAAAAAGASAQQAGKSISDAAVGGVNFVKDKTG 63

Query:    65 MNK 67
             +NK
Sbjct:    64 LNK 66

GO:0003674 "molecular_function" evidence=ND

GO:0009409 "response to cold" evidence=NAS

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA;TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0009507 "chloroplast" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0006970 "response to osmotic stress" evidence=IEP

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

TAIR|locus:2146047 KIN1 "AT5G15960" [Arabidopsis thaliana (taxid:3702)]

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 27/63 (42%), Positives = 41/63 (65%)

Query:     5 SQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATG 64
             + K ++QAG+  G+A+EK+N ++DKA +AA  A     QAG+ V   A G  + VK+ TG
Sbjct:     4 TNKNAFQAGQTAGKAEEKSNVLLDKAKDAAAGAGAGAQQAGKSVSDAAAGGVNFVKDKTG 63

Query:    65 MNK 67
             +NK
Sbjct:    64 LNK 66

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006970 "response to osmotic stress" evidence=IEP;IGI

GO:0009409 "response to cold" evidence=IEP

GO:0010017 "red or far-red light signaling pathway" evidence=IEP

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009631 "cold acclimation" evidence=IDA

GO:0009737 "response to abscisic acid stimulus" evidence=IEP

TAIR|locus:2035109 LEA7 "AT1G52690" [Arabidopsis thaliana (taxid:3702)]

 Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 25/63 (39%), Positives = 36/63 (57%)

Query:     1 MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
             MA + Q+ SY+AGE +G+AQEK    M   G+  Q+AKD   +  +  + KA   A S K
Sbjct:     1 MASH-QEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAK 59

Query:    61 NAT 63
             + T
Sbjct:    60 DKT 62

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0009793 "embryo development ending in seed dormancy" evidence=ISS

GO:0009830 "cell wall modification involved in abscission" evidence=RCA

TAIR|locus:2093307 AT3G15670 "AT3G15670" [Arabidopsis thaliana (taxid:3702)]

 Score = 107 (42.7 bits), Expect = 8.0e-06, P = 8.0e-06
 Identities = 24/63 (38%), Positives = 34/63 (53%)

Query:     1 MADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVK 60
             MA N Q  SY+AGE +G+AQEK    M    + A+  +D  +Q  +  + KA   A S K
Sbjct:     1 MASNQQ--SYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAK 58

Query:    61 NAT 63
             + T
Sbjct:    59 DKT 61

GO:0003674 "molecular_function" evidence=ND

GO:0009793 "embryo development ending in seed dormancy" evidence=ISS

GO:0005634 "nucleus" evidence=IDA

GO:0010162 "seed dormancy process" evidence=RCA

TAIR|locus:2140842 UNE15 "AT4G13560" [Arabidopsis thaliana (taxid:3702)]

 Score = 93 (37.8 bits), Expect = 0.00010, P = 0.00010
 Identities = 25/70 (35%), Positives = 35/70 (50%)

Query:     2 ADNSQKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDS----MNQAGEQVKAKAQGAAD 57
             AD +Q    +A +    A++K       A  +AQ  ++       Q GE VK  AQGA D
Sbjct:    38 ADLTQSARDKAADLTQSARDKTADGSHSANKSAQHNQEQAAGLFGQTGESVKNMAQGALD 97

Query:    58 SVKNATGMNK 67
              VKN+ GMN+
Sbjct:    98 GVKNSLGMNE 107

GO:0003674 "molecular_function" evidence=ND

GO:0009793 "embryo development ending in seed dormancy" evidence=ISS

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IMP

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2823550 AT1G15415 "AT1G15415" [Arabidopsis thaliana (taxid:3702)]

 Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query:     6 QKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATGM 65
             ++ S +AG+  GQA  K N       N++Q A   + Q GE+VK+ A  A+++VKN  G+
Sbjct:     7 EEFSVRAGQIVGQAHVKEND----CNNSSQ-ASGFLQQKGEKVKSMAHDASEAVKNKLGI 61

Query:    66 N 66
             N
Sbjct:    62 N 62


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.296   0.107   0.265    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       67        67   0.00091  102 3  10 24  0.38    29
                                                     29  0.49    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  9
  No. of states in DFA:  397 (42 KB)
  Total size of DFA:  82 KB (2067 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  11.25u 0.11s 11.36t   Elapsed:  00:00:01
  Total cpu time:  11.25u 0.11s 11.36t   Elapsed:  00:00:01
  Start:  Sat May 11 04:46:07 2013   End:  Sat May 11 04:46:08 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008150 "biological_process" evidence=ND

GO:0005829 "cytosol" evidence=IDA

GO:0048046 "apoplast" evidence=IDA

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	67
KOG4744	308	consensus Uncharacterized conserved protein [Funct	97.27
PF02987	44	LEA_4: Late embryogenesis abundant protein; InterP	96.78
PF02987	44	LEA_4: Late embryogenesis abundant protein; InterP	96.33
COG3237	67	Uncharacterized protein conserved in bacteria [Fun	95.97
KOG4744	308	consensus Uncharacterized conserved protein [Funct	95.08
PF14013	51	MT0933_antitox: MT0933-like antitoxin protein	87.23
PF05957	94	DUF883: Bacterial protein of unknown function (DUF	83.1
PF12732	74	YtxH: YtxH-like protein; InterPro: IPR024623 This	80.85

>KOG4744 consensus Uncharacterized conserved protein [Function unknown]

Probab=97.27  E-value=0.0012  Score=50.25  Aligned_cols=56  Identities=41%  Similarity=0.391  Sum_probs=39.3

Q ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHH
Q 047340            6 QKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKN   61 (67)
Q Consensus         6 ~~~s~~AGea~gqaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA~davK~   61 (67)
                      +..+++||++++.+.||+++.++.+.+.+.+++|...|+-..+.+.+..+.|.+++
T Consensus        85 ~~a~~kA~~a~~~A~eKag~A~d~a~dka~s~kD~a~qakDkA~~~a~~~~d~A~D  140 (308)
T KOG4744|consen   85 DKASDKAGEAKDKAYEKAGSAKDTAKDKAGSAKDKASQAKDKAYEAAGLVKDSAYD  140 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence            45899999999999999999999888887766665544444444444443333333

>PF02987 LEA_4: Late embryogenesis abundant protein; InterPro: IPR004238 Different types of late embryogenesis abundant (LEA) proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress

Probab=96.78  E-value=0.008  Score=33.15  Aligned_cols=36  Identities=42%  Similarity=0.446  Sum_probs=22.2

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 047340            9 SYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQA   44 (67)
Q Consensus         9 s~~AGea~gqaqeKa~~~m~~ak~aAqaakd~~qqa   44 (67)
                      ..++++++..+.+|+.++.+++.+++..+||++.+.
T Consensus         5 ~~Ka~e~~d~a~~ka~e~kd~a~eKa~eaKd~a~ek   40 (44)
T PF02987_consen    5 KEKASEAKDAAKEKAGEAKDAAAEKAEEAKDSAKEK   40 (44)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            455666666666666666666666666666655443

The function of these proteins is unknown. This entry represents a repeat characteristic of some LEA proteins, including LEA3 [, ].

>PF02987 LEA_4: Late embryogenesis abundant protein; InterPro: IPR004238 Different types of late embryogenesis abundant (LEA) proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress

Probab=96.33  E-value=0.029  Score=30.87  Aligned_cols=37  Identities=35%  Similarity=0.389  Sum_probs=26.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhh
Q 047340           18 QAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQG   54 (67)
Q Consensus        18 qaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~Aqg   54 (67)
                      .+.+|++++-+.+.+.+..++|.+.+-...++..+.+
T Consensus         3 ~a~~Ka~e~~d~a~~ka~e~kd~a~eKa~eaKd~a~e   39 (44)
T PF02987_consen    3 AAKEKASEAKDAAKEKAGEAKDAAAEKAEEAKDSAKE   39 (44)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5678888888888888887777666666665555444

The function of these proteins is unknown. This entry represents a repeat characteristic of some LEA proteins, including LEA3 [, ].

>COG3237 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.97  E-value=0.041  Score=33.82  Aligned_cols=63  Identities=29%  Similarity=0.369  Sum_probs=52.1

Q ss_pred             CcchhHHHhhHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHh
Q 047340            1 MADNSQKMSYQAGEAKGQAQEKANTMMDK----AGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNAT   63 (67)
Q Consensus         1 m~~~s~~~s~~AGea~gqaqeKa~~~m~~----ak~aAqaakd~~qqageqvk~~AqgA~davK~~~   63 (67)
                      |++.++.+.-++-+++|.++|..+.+.+.    +.-+++.++-.+|+.-+.+|.++-++.|.+++.+
T Consensus         1 M~~~~dr~~g~~~q~~GkvKE~~Gk~Tgd~~l~aeGka~ka~gkvqe~~g~aKd~vk~a~d~~~~~~   67 (67)
T COG3237           1 MSDEKDRIEGKAKQAKGKVKEGVGKATGDDSLEAEGKADKAKGKVQERVGDAKDKVKKAVDDVKNRL   67 (67)
T ss_pred             CCchHHHHHHHHHHhhhHHHHHHccccCCHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            56667888999999999999999999874    5555677777888998999999999988888753

>KOG4744 consensus Uncharacterized conserved protein [Function unknown]

Probab=95.08  E-value=0.13  Score=39.26  Aligned_cols=52  Identities=40%  Similarity=0.490  Sum_probs=32.3

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHhHHHHHHHHHHhhHHHHHHH
Q 047340           10 YQAGEAKGQAQEKANTMMDKAGNAAQ-----------SAKDSMNQAGEQVKAKAQGAADSVKN   61 (67)
Q Consensus        10 ~~AGea~gqaqeKa~~~m~~ak~aAq-----------aakd~~qqageqvk~~AqgA~davK~   61 (67)
                      .+++|+...+.+|+.+.-++++|.|.           .+++.+.++.+.++.+++.+.|..++
T Consensus       166 eka~e~a~sA~dkA~dake~Ak~~A~d~~d~a~e~~~~A~dk~~et~e~~Kdka~d~~e~A~d  228 (308)
T KOG4744|consen  166 EKAGEAADSARDKAADAKESAKNKAEDTKDSAPEAAGSAKDKAAETAEKAKDKAQDAKEKAKD  228 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence            45555555555555555555555554           56666777777777777776666654

>PF14013 MT0933_antitox: MT0933-like antitoxin protein

Probab=87.23  E-value=2.4  Score=24.31  Aligned_cols=48  Identities=25%  Similarity=0.412  Sum_probs=32.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHhc
Q 047340           11 QAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNATG   64 (67)
Q Consensus        11 ~AGea~gqaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA~davK~~~G   64 (67)
                      +|.+...+-.+|..+.++++.+.+-      .-||..-......+.|++++.||
T Consensus         4 Kak~~~~~~~dk~~~~iDKA~d~vd------~kTGgKy~dqId~~~d~a~~~lg   51 (51)
T PF14013_consen    4 KAKDLASKNPDKIDQGIDKAGDFVD------EKTGGKYSDQIDKAQDKAKDALG   51 (51)
T ss_pred             HHHHHHHHChHHHHHHHHHHHHHHH------hhcCCchHHHHHHHHHHHHhhcC
Confidence            5566666667777777777777554      34666666666777777777765

>PF05957 DUF883: Bacterial protein of unknown function (DUF883); InterPro: IPR010279 This family consists of several bacterial proteins of unknown function that include the Escherichia coli genes for ElaB, YgaM and YqjD

Probab=83.10  E-value=8.2  Score=23.52  Aligned_cols=49  Identities=31%  Similarity=0.409  Sum_probs=30.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHH
Q 047340           13 GEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKN   61 (67)
Q Consensus        13 Gea~gqaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA~davK~   61 (67)
                      ..+...+.++++++-+.+.+....+++.+.+..+++...+..+.+.+.+
T Consensus        19 ~~~~~~~~~~~~~~r~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~   67 (94)
T PF05957_consen   19 RSAADLAGEKADEARDRAEEALDDARDRAEDAADQAREQAREAAEQTED   67 (94)
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            3344455555666666666666677777777777776666665555443

>PF12732 YtxH: YtxH-like protein; InterPro: IPR024623 This family of uncharacterised proteins is found in bacteria

Probab=80.85  E-value=9.1  Score=22.50  Aligned_cols=19  Identities=26%  Similarity=0.393  Sum_probs=7.4

Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 047340           18 QAQEKANTMMDKAGNAAQS   36 (67)
Q Consensus        18 qaqeKa~~~m~~ak~aAqa   36 (67)
                      ...++++++.+++.+....
T Consensus        30 ~l~~~~~~~~~~~~~~~~~   48 (74)
T PF12732_consen   30 KLKDKAEDLKDKAKDLYEE   48 (74)
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            3333334444444443333

Proteins in this family are typically between 100 and 143 amino acids in length. The N-terminal region is the most conserved.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	67
2x43_S	67	Sherp; membrane protein; NMR {Leishmania major}	93.65
2x43_S	67	Sherp; membrane protein; NMR {Leishmania major}	93.0

>2x43_S Sherp; membrane protein; NMR {Leishmania major}

Probab=93.65  E-value=0.071  Score=31.97  Aligned_cols=50  Identities=30%  Similarity=0.480  Sum_probs=35.6

Q ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhH
Q 047340            6 QKMSYQAGEAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGA   55 (67)
Q Consensus         6 ~~~s~~AGea~gqaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA   55 (67)
                      +++...|+|++-.+..|+.++-+-+.++|...+|.+.++.+.+|.+..|-
T Consensus         7 Dk~~~~A~E~kd~~~dK~qElKdga~~KAaelkD~~~~~~E~iKDKisgG   56 (67)
T 2x43_S            7 DQMKNAAAEAKDNVHDKIQELKDDVGNKAAEVRDAVSSTVESIKDKLSGG   56 (67)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhHHHHHHHHhccC
Confidence            45666777777777777777777777777777777777777777766553

>2x43_S Sherp; membrane protein; NMR {Leishmania major}

Probab=93.00  E-value=0.21  Score=29.85  Aligned_cols=50  Identities=20%  Similarity=0.330  Sum_probs=38.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhHHHHHHHHh
Q 047340           14 EAKGQAQEKANTMMDKAGNAAQSAKDSMNQAGEQVKAKAQGAADSVKNAT   63 (67)
Q Consensus        14 ea~gqaqeKa~~~m~~ak~aAqaakd~~qqageqvk~~AqgA~davK~~~   63 (67)
                      |++-++.+|+.++-+++-|+++.-||.+.--.-.++.++...++.+|+++
T Consensus         4 E~kDk~~~~A~E~kd~~~dK~qElKdga~~KAaelkD~~~~~~E~iKDKi   53 (67)
T 2x43_S            4 ETRDQMKNAAAEAKDNVHDKIQELKDDVGNKAAEVRDAVSSTVESIKDKL   53 (67)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTTTTTTHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhHHHHHHHHh
Confidence            78889999999999999999999998665555556666666666666654

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00