Citrus Sinensis ID: 047365
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 243 | ||||||
| 297795877 | 289 | nodulin MtN3 family protein [Arabidopsis | 0.876 | 0.737 | 0.647 | 1e-80 | |
| 15241265 | 289 | nodulin MtN3-like protein [Arabidopsis t | 0.876 | 0.737 | 0.638 | 8e-80 | |
| 147776011 | 273 | hypothetical protein VITISV_023352 [Viti | 0.872 | 0.776 | 0.617 | 4e-75 | |
| 225456416 | 270 | PREDICTED: bidirectional sugar transport | 0.872 | 0.785 | 0.617 | 4e-75 | |
| 449440520 | 292 | PREDICTED: bidirectional sugar transport | 0.876 | 0.729 | 0.602 | 2e-74 | |
| 224134080 | 283 | predicted protein [Populus trichocarpa] | 0.872 | 0.749 | 0.626 | 3e-73 | |
| 356507380 | 305 | PREDICTED: bidirectional sugar transport | 0.901 | 0.718 | 0.572 | 3e-73 | |
| 351727479 | 260 | N3 protein [Glycine max] gi|155212489|gb | 0.930 | 0.869 | 0.569 | 7e-73 | |
| 363808120 | 258 | uncharacterized protein LOC100810962 [Gl | 0.897 | 0.844 | 0.564 | 2e-72 | |
| 356508839 | 258 | PREDICTED: bidirectional sugar transport | 0.860 | 0.810 | 0.573 | 7e-72 |
| >gi|297795877|ref|XP_002865823.1| nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata] gi|297311658|gb|EFH42082.1| nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/227 (64%), Positives = 186/227 (81%), Gaps = 14/227 (6%)
Query: 1 NITSFLVCLAPMPTFYKIYKKKSTEGFQSVPYVISLFSAMIWIYYALLKQNAIFLMTINT 60
NI SF VCLAP+PTF +IYK+KS+EG+QS+PYVISLFSAM+W+YYA++K++A+ L+TIN+
Sbjct: 17 NIISFFVCLAPIPTFVRIYKRKSSEGYQSIPYVISLFSAMLWMYYAMIKKDAMMLITINS 76
Query: 61 FCCVMQTIYIAVYVFYAPKKVRIQTVKLLLLLNIFGFGAI------------REKILGYI 108
F V+Q +YI++Y FYAPKK + TVK +L +++FGFGAI R +LGYI
Sbjct: 77 FAFVIQIVYISLYFFYAPKKEKTLTVKFVLFVDVFGFGAIFVLTYFLIHANKRVHVLGYI 136
Query: 109 CMTFALSVFAAPLFIVRKVIKTKSVEYMPFTLSFFLTIGAVAWFFYGLLIKDLNVAIPNV 168
CM FALSVF APL I+RKVIKTKS E+MPF LSFFLT+ AV WFFYGLL+KD+N+A+PNV
Sbjct: 137 CMVFALSVFLAPLGIIRKVIKTKSAEFMPFGLSFFLTLSAVMWFFYGLLLKDMNIALPNV 196
Query: 169 LGFIFGVLQMILYVIYKNPNKKIVE--QTKLQELSEHVVDVVKLSTM 213
LGFIFGVLQMIL++IYK P K++E KLQ++SEHVVDVV+LSTM
Sbjct: 197 LGFIFGVLQMILFLIYKKPGTKVLEPPGIKLQDISEHVVDVVRLSTM 243
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15241265|ref|NP_199892.1| nodulin MtN3-like protein [Arabidopsis thaliana] gi|75180553|sp|Q9LUE3.1|SWT10_ARATH RecName: Full=Bidirectional sugar transporter SWEET10; Short=AtSWEET10 gi|8777402|dbj|BAA96992.1| MtN3-like protein [Arabidopsis thaliana] gi|15450936|gb|AAK96739.1| MtN3-like protein [Arabidopsis thaliana] gi|17978773|gb|AAL47380.1| MtN3-like protein [Arabidopsis thaliana] gi|21536902|gb|AAM61234.1| MtN3-like protein [Arabidopsis thaliana] gi|332008609|gb|AED95992.1| nodulin MtN3-like protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|147776011|emb|CAN71371.1| hypothetical protein VITISV_023352 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|225456416|ref|XP_002284244.1| PREDICTED: bidirectional sugar transporter SWEET10 [Vitis vinifera] gi|297734467|emb|CBI15714.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|449440520|ref|XP_004138032.1| PREDICTED: bidirectional sugar transporter SWEET10-like [Cucumis sativus] gi|449501418|ref|XP_004161361.1| PREDICTED: bidirectional sugar transporter SWEET10-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|224134080|ref|XP_002321731.1| predicted protein [Populus trichocarpa] gi|222868727|gb|EEF05858.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|356507380|ref|XP_003522445.1| PREDICTED: bidirectional sugar transporter SWEET14-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|351727479|ref|NP_001237418.1| N3 protein [Glycine max] gi|155212489|gb|ABT17358.1| N3 protein [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|363808120|ref|NP_001242732.1| uncharacterized protein LOC100810962 [Glycine max] gi|255640062|gb|ACU20322.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|356508839|ref|XP_003523161.1| PREDICTED: bidirectional sugar transporter SWEET14-like [Glycine max] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 243 | ||||||
| TAIR|locus:2163325 | 289 | SWEET10 [Arabidopsis thaliana | 0.876 | 0.737 | 0.638 | 1.7e-75 | |
| TAIR|locus:2157951 | 294 | SWEET13 [Arabidopsis thaliana | 0.888 | 0.734 | 0.567 | 3e-62 | |
| TAIR|locus:2171721 | 285 | SWEET12 [Arabidopsis thaliana | 0.905 | 0.771 | 0.540 | 3.8e-62 | |
| UNIPROTKB|B8BKP4 | 303 | SWEET14 "Bidirectional sugar t | 0.790 | 0.633 | 0.607 | 3.4e-61 | |
| UNIPROTKB|Q2R3P9 | 303 | SWEET14 "Bidirectional sugar t | 0.790 | 0.633 | 0.607 | 3.4e-61 | |
| TAIR|locus:2179867 | 292 | SAG29 "senescence-associated g | 0.864 | 0.719 | 0.517 | 8.1e-60 | |
| TAIR|locus:2114540 | 289 | SWEET11 [Arabidopsis thaliana | 0.897 | 0.754 | 0.532 | 1e-59 | |
| TAIR|locus:2117263 | 281 | SWEET14 [Arabidopsis thaliana | 0.872 | 0.754 | 0.559 | 1.2e-58 | |
| UNIPROTKB|Q2QR07 | 296 | SWEET13 "Bidirectional sugar t | 0.765 | 0.628 | 0.580 | 2.5e-58 | |
| UNIPROTKB|P93332 | 268 | N3 "Bidirectional sugar transp | 0.806 | 0.731 | 0.528 | 8.4e-58 |
| TAIR|locus:2163325 SWEET10 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 145/227 (63%), Positives = 186/227 (81%)
Query: 1 NITSFLVCLAPMPTFYKIYKKKSTEGFQSVPYVISLFSAMIWIYYALLKQNAIFLMTINT 60
NI SF VCLAP+PTF +IYK+KS+EG+QS+PYVISLFSAM+W+YYA++K++A+ L+TIN+
Sbjct: 17 NIISFFVCLAPIPTFVRIYKRKSSEGYQSIPYVISLFSAMLWMYYAMIKKDAMMLITINS 76
Query: 61 FCCVMQTIYIAVYVFYAPKKVRIQTVKLLLLLNIFGFGAI------------REKILGYI 108
F V+Q +YI+++ FYAPKK + TVK +L +++ GFGAI R ++LGYI
Sbjct: 77 FAFVVQIVYISLFFFYAPKKEKTLTVKFVLFVDVLGFGAIFVLTYFIIHANKRVQVLGYI 136
Query: 109 CMTFALSVFAAPLFIVRKVIKTKSVEYMPFTLSFFLTIGAVAWFFYGLLIKDLNVAIPNV 168
CM FALSVF APL I+RKVIKTKS E+MPF LSFFLT+ AV WFFYGLL+KD+N+A+PNV
Sbjct: 137 CMVFALSVFVAPLGIIRKVIKTKSAEFMPFGLSFFLTLSAVMWFFYGLLLKDMNIALPNV 196
Query: 169 LGFIFGVLQMILYVIYKNPNKKIVEQT--KLQELSEHVVDVVKLSTM 213
LGFIFGVLQMIL++IYK P K++E KLQ++SEHVVDVV+LSTM
Sbjct: 197 LGFIFGVLQMILFLIYKKPGTKVLEPPGIKLQDISEHVVDVVRLSTM 243
|
|
| TAIR|locus:2157951 SWEET13 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2171721 SWEET12 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|B8BKP4 SWEET14 "Bidirectional sugar transporter SWEET14" [Oryza sativa Indica Group (taxid:39946)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2R3P9 SWEET14 "Bidirectional sugar transporter SWEET14" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2179867 SAG29 "senescence-associated gene 29" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2114540 SWEET11 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2117263 SWEET14 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q2QR07 SWEET13 "Bidirectional sugar transporter SWEET13" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P93332 N3 "Bidirectional sugar transporter N3" [Medicago truncatula (taxid:3880)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 243 | |||
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 2e-23 | |
| pfam03083 | 87 | pfam03083, MtN3_slv, Sugar efflux transporter for | 3e-19 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 2e-23
Identities = 39/85 (45%), Positives = 55/85 (64%)
Query: 103 KILGYICMTFALSVFAAPLFIVRKVIKTKSVEYMPFTLSFFLTIGAVAWFFYGLLIKDLN 162
+LG +C+ F+++VF +PL I+RKVIKTKSVE MPF + A W YGLL KD
Sbjct: 1 FLLGLLCVVFSVAVFLSPLSILRKVIKTKSVEGMPFLPFLAGLLSASLWLLYGLLKKDGY 60
Query: 163 VAIPNVLGFIFGVLQMILYVIYKNP 187
+ IPN +G + G + +IL++IY
Sbjct: 61 IIIPNGVGCVLGTIYLILFIIYPPK 85
|
This family includes proteins such as drosophila saliva, MtN3 involved in root nodule development and a protein involved in activation and expression of recombination activation genes (RAGs). Although the molecular function of these proteins is unknown, they are almost certainly transmembrane proteins. This family contains a region of two transmembrane helices that is found in two copies in most members of the family. This family also contains specific sugar efflux transporters that are essential for the maintenance of animal blood glucose levels, plant nectar production, and plant seed and pollen development. In many organisims it meditaes gluose transport; in Arabidopsis it is necessary for pollen viability; and two of the rice homologues are specifically exploited by bacterial pathogens for virulence by means of direct binding of a bacterial effector to the SWEET promoter. Length = 87 |
| >gnl|CDD|202529 pfam03083, MtN3_slv, Sugar efflux transporter for intercellular exchange | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 243 | |||
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 100.0 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.85 | |
| PF03083 | 87 | MtN3_slv: Sugar efflux transporter for intercellul | 99.8 | |
| KOG1623 | 243 | consensus Multitransmembrane protein [General func | 99.48 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.33 | |
| COG4095 | 89 | Uncharacterized conserved protein [Function unknow | 99.11 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 98.94 | |
| KOG3211 | 230 | consensus Predicted endoplasmic reticulum membrane | 98.59 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 98.13 | |
| PF04193 | 61 | PQ-loop: PQ loop repeat | 98.01 | |
| KOG2913 | 260 | consensus Predicted membrane protein [Function unk | 97.41 | |
| TIGR00951 | 220 | 2A43 Lysosomal Cystine Transporter. | 96.39 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 96.23 | |
| PHA02246 | 192 | hypothetical protein | 95.74 | |
| smart00679 | 32 | CTNS Repeated motif present between transmembrane | 94.78 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 93.84 | |
| PF10688 | 163 | Imp-YgjV: Bacterial inner membrane protein; InterP | 92.52 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 89.68 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 88.08 | |
| PF03650 | 119 | MPC: Uncharacterised protein family (UPF0041); Int | 85.61 | |
| KOG3145 | 372 | consensus Cystine transporter Cystinosin [Amino ac | 83.74 | |
| PHA02246 | 192 | hypothetical protein | 82.93 | |
| KOG1589 | 118 | consensus Uncharacterized conserved protein [Funct | 81.1 | |
| KOG3211 | 230 | consensus Predicted endoplasmic reticulum membrane | 81.01 |
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-46 Score=323.91 Aligned_cols=215 Identities=49% Similarity=0.845 Sum_probs=181.1
Q ss_pred CeeehhHhhccHHHHHHHHHhcCCCCCCchhHHHHHHHHHHHHHhhcccc-CceeeeehhhHHHHHHHHHHHhhhhccCc
Q 047365 1 NITSFLVCLAPMPTFYKIYKKKSTEGFQSVPYVISLFSAMIWIYYALLKQ-NAIFLMTINTFCCVMQTIYIAVYVFYAPK 79 (243)
Q Consensus 1 ~i~s~~~~lSplp~i~~I~k~kst~~~s~~p~v~~~~n~~lW~~YG~l~~-d~~~v~~~N~~G~~l~~~y~~v~~~y~~~ 79 (243)
|++++++|++|+|+++||+|+||+|++|+.||+++++||++|+.||.+++ |. .++.+|++|++++++|+..|+.|+++
T Consensus 14 ~~is~~~fl~pv~tf~~I~KkkS~e~~s~~Pfl~~ll~~~lWl~YG~~~~~d~-llitIN~~G~~ie~~Yi~~f~~ya~~ 92 (243)
T KOG1623|consen 14 NIISFGVFLSPVPTFRRIRKKKSVEGFSSLPFLMGLLSCSLWLYYGLLKVHDY-LLITINGIGLVIETVYISIFLYYAPK 92 (243)
T ss_pred HHHhHHHhhcCchhHHHhhcccCcCCCCCcCcHHHHHHHHHHHHhhhhccCce-EEEEEehhcHHHHHHHHHHHheecCc
Confidence 67899999999999999999999999999999999999999999999888 66 59999999999999999999999998
Q ss_pred chhHHHHHH---HHHHHHHhhhHh-------HHHHHHHHHHHHHHHHhhccccccceeeecCcccccChhHHHHHHhhhH
Q 047365 80 KVRIQTVKL---LLLLNIFGFGAI-------REKILGYICMTFALSVFAAPLFIVRKVIKTKSVEYMPFTLSFFLTIGAV 149 (243)
Q Consensus 80 ~~~~~~~~~---~~~~~v~~~~~~-------~~~~lG~ia~~~~i~~f~Spl~~i~~virtkst~~ls~~~~~~~~~n~~ 149 (243)
|+....... ........+.+. |.+.+|.+|.+++++||+||+..+++++|+||+|.||++++++.++++.
T Consensus 93 k~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~lG~vc~~~nI~~~~sPL~~m~~VIktkSvE~mPf~Ls~a~fl~a~ 172 (243)
T KOG1623|consen 93 KKTVKIVLALVLGVIGLIILLTLLLFHDPERRVSVLGIVCAVFNISMFAAPLSVIRKVIKTKSVEYMPFPLSFALFLVAV 172 (243)
T ss_pred hheeEeeehHHHHHHHHHHHHHHHhcCCcceeeeeeehhhhhhhHHhhhccHHhhhhheecCceeeechHHHHHHHHHHH
Confidence 873221111 111111222222 5789999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcccCeeeEechhHHHHHHHHhhhheEEEeCCCccccchhhhhccccceeEEEEecCCCCCCC
Q 047365 150 AWFFYGLLIKDLNVAIPNVLGFIFGVLQMILYVIYKNPNKKIVEQTKLQELSEHVVDVVKLSTMRHPGP 218 (243)
Q Consensus 150 ~W~~YG~l~~d~~i~~~N~~G~~l~~~ql~l~~~y~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 218 (243)
.|++||++++|.++.+||.+|..++++|+.+|++|++++.+. ..+.++.+|+++|..+.++...+|.
T Consensus 173 ~W~lYGlli~D~~IaipN~iG~~l~~~QL~Ly~~y~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (243)
T KOG1623|consen 173 QWLLYGLLIKDFFIAIPNVLGFLLGLIQLILYFKYPKTTEKI--VPPKQNKKDVVVDEVLLGTIVVDEP 239 (243)
T ss_pred HHHHHHHHhcCeEEEcccHHHHHHHHHHHHHhhhcCCCcccc--cccccccCCccccccccCCcccCCc
Confidence 999999999999999999999999999999999998877443 2223345667777777655554544
|
|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
|---|
| >PF03083 MtN3_slv: Sugar efflux transporter for intercellular exchange; InterPro: IPR004316 This family includes proteins such as Drosophila saliva [], MtN3 involved in root nodule development [] and proteins involved in activation and expression of recombination activation genes (RAGs) [] | Back alignment and domain information |
|---|
| >KOG1623 consensus Multitransmembrane protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >COG4095 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
|---|
| >KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] | Back alignment and domain information |
|---|
| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
|---|
| >PF04193 PQ-loop: PQ loop repeat | Back alignment and domain information |
|---|
| >KOG2913 consensus Predicted membrane protein [Function unknown] | Back alignment and domain information |
|---|
| >TIGR00951 2A43 Lysosomal Cystine Transporter | Back alignment and domain information |
|---|
| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
|---|
| >PHA02246 hypothetical protein | Back alignment and domain information |
|---|
| >smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins | Back alignment and domain information |
|---|
| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
|---|
| >PF10688 Imp-YgjV: Bacterial inner membrane protein; InterPro: IPR019629 This entry represents inner membrane proteins, many are YgjV proteins | Back alignment and domain information |
|---|
| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
| >PF03650 MPC: Uncharacterised protein family (UPF0041); InterPro: IPR005336 This is a family of proteins of unknown function | Back alignment and domain information |
|---|
| >KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >PHA02246 hypothetical protein | Back alignment and domain information |
|---|
| >KOG1589 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 243 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-05 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.3 bits (101), Expect = 4e-05
Identities = 14/72 (19%), Positives = 25/72 (34%), Gaps = 13/72 (18%)
Query: 31 PYVISLFSAMI---------WIYYALLKQNAIFLMTINTF-CCVMQTIYIAVYVFYAPKK 80
P +S+ + I W + K I ++N + ++ + VF P
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF--PPS 384
Query: 81 VRIQTVKLLLLL 92
I LL L+
Sbjct: 385 AHI-PTILLSLI 395
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00