Citrus Sinensis ID: 047424

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------38
MVGFRQYVAVLLVLSAPFCLGIRSIPSRSIDGGDFLGFDRFTEAPDYRNGRGCPVSANKITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHSNRIKDHHQSSVLFPPSSSSLIGFSSFL
ccHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEccccHHHHHHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHHHccccccEEEEEEccccHHHcccccccccccccHHHHHHHHccccccccccEEEEEEccEEEEcccHHHHcccccccEEEEEEEEccccccccccccccccHHHHHHcccccccccccccHHccHHHHHHHcHHHHHHHHHHHHcccccccccccHHHHHHHcccEEEcccccccccccccccccccccccccccEEEEEcccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccc
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEcccccccccccccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccHHHHHHHHHHccccccEEEEEEEEccccccccccccccHHHHcHHHHHHHHHHHHccccccEEEEEcccEEEEccHHHHHccccccccEEcccHHccccccccccccccccHHHHHHcccccccHEccccEEEEHHHHHHccHHHHHHHHHHHHHccEEEEccccccEEEEEccccccccccccEcccccccccccccccccccEEEEEEccccccEEEccccccccccHHEcccHHccccccccHccccccccccccHHHccccccc
MVGFRQYVAVLLVLSapfclgirsipsrsidggdflgfdrfteapdyrngrgcpvsankitsscdpsLVHVAMTLDSEYLRGSIAAVHSAlkhascpeniffhfisaefdsasprVLTQLVrstfpslnfkvyIFREDTVINLISSSIREALENPLNYARnylgdildpcvdrviyidsdlvlvDDIHKLWDItltkskiigapeychanftkyftdnfwsdpllsrvfgsrkpcyfntgVMVMDLVRWRKGNYRKRIENWMEIQRRKRiydlgslppflLVFAGNVeaidhrwnqhglggdnvkgscrslhpgpvsllhwsgkgkpwvrldnkqpcpldylwepydlfkhsnrikdhhqssvlfppssssligfssfl
MVGFRQYVAVLLVLSAPFCLGirsipsrsidggdFLGFDRFTEAPDYRNGRGCPVSANKITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHSNRIKDHHqssvlfppssssligfssfl
MVGFRQYVAVLLVLSAPFCLGIRSIPSRSIDGGDFLGFDRFTEAPDYRNGRGCPVSANKITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHSNRIKDHHQssvlfppssssligfssfl
**GFRQYVAVLLVLSAPFCLGIRSIPSRSIDGGDFLGFDRFTEAPDYRNGRGCPVSANKITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHSNR*************************
*VGFRQYVAVLLVLSAPFCLGIRSIPSRS***G***GFDRFTEAPDY*******************SLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS********************IGFSSFL
MVGFRQYVAVLLVLSAPFCLGIRSIPSRSIDGGDFLGFDRFTEAPDYRNGRGCPVSANKITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHSNRIKDHHQSSVLFPPSSSSLIGFSSFL
*VGFRQYVAVLLVLSAPFCLGIRSIPSRSIDGGDFLGFDRFTEAPDYRNGRGCPVSANKITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHSNRIK***********************
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVGFRQYVAVLLVLSAPFCLGIRSIPSRSIDGGDFLGFDRFTEAPDYRNGRGCPVSANKITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHSNRIKDHHQSSVLFPPSSSSLIGFSSFL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query379 2.2.26 [Sep-21-2011]
O04536390 Probable galacturonosyltr yes no 0.944 0.917 0.735 1e-162
O48684393 Probable galacturonosyltr no no 0.976 0.941 0.701 1e-156
Q9LHD2365 Probable galacturonosyltr no no 0.836 0.868 0.670 1e-131
O04253346 Probable galacturonosyltr no no 0.804 0.881 0.675 1e-123
Q8VYF4361 Probable galacturonosyltr no no 0.807 0.847 0.675 1e-121
Q9FWY9361 Probable galacturonosyltr no no 0.817 0.858 0.643 1e-119
Q9M8J2351 Probable galacturonosyltr no no 0.788 0.851 0.584 1e-111
Q9S7G2341 Probable galacturonosyltr no no 0.823 0.914 0.573 1e-108
Q9LN68351 Probable galacturonosyltr no no 0.817 0.883 0.596 1e-106
Q0V7R1345 Probable galacturonosyltr no no 0.825 0.907 0.606 1e-104
>sp|O04536|GATL9_ARATH Probable galacturonosyltransferase-like 9 OS=Arabidopsis thaliana GN=GATL9 PE=2 SV=1 Back     alignment and function desciption
 Score =  572 bits (1474), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 278/378 (73%), Positives = 309/378 (81%), Gaps = 20/378 (5%)

Query: 9   AVLLVLSAPFCLGIRSIPSR----SIDGGDFLGFDRFTEAPDYRNGRGC---PVSANKIT 61
           A+ LV    F +GIR IP R    S   G+      F EAP+YRNG+ C    ++     
Sbjct: 15  AIFLVFIPLFSVGIRMIPGRLTAVSATVGNGFDLGSFVEAPEYRNGKECVSQSLNRENFV 74

Query: 62  SSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLV 121
           SSCD SLVHVAMTLDSEYLRGSIAAVHS L+HASCPEN+FFH I+AEFD ASPRVL+QLV
Sbjct: 75  SSCDASLVHVAMTLDSEYLRGSIAAVHSMLRHASCPENVFFHLIAAEFDPASPRVLSQLV 134

Query: 122 RSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDL 181
           RSTFPSLNFKVYIFREDTVINLISSSIR+ALENPLNYARNYLGDILDPCVDRVIY+DSD+
Sbjct: 135 RSTFPSLNFKVYIFREDTVINLISSSIRQALENPLNYARNYLGDILDPCVDRVIYLDSDI 194

Query: 182 VLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGV 241
           ++VDDI KLW+ +LT S+IIGAPEYCHANFTKYFT  FWSDP L   F  RKPCYFNTGV
Sbjct: 195 IVVDDITKLWNTSLTGSRIIGAPEYCHANFTKYFTSGFWSDPALPGFFSGRKPCYFNTGV 254

Query: 242 MVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGG 301
           MVMDLVRWR+GNYR+++E WM+IQ++KRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGG
Sbjct: 255 MVMDLVRWREGNYREKLETWMQIQKKKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGG 314

Query: 302 DNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS-NRIKDHHQ 360
           DNV+GSCRSLH GPVSLLHWSGKGKPWVRLD K+PCPLD+LWEPYDL++H   R KD   
Sbjct: 315 DNVRGSCRSLHKGPVSLLHWSGKGKPWVRLDEKRPCPLDHLWEPYDLYEHKIERAKDQ-- 372

Query: 361 SSVLFPPSSSSLIGFSSF 378
                     SL GFSS 
Sbjct: 373 ----------SLFGFSSL 380
May be involved in pectin and/or xylans biosynthesis in cell walls.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|O48684|GATL8_ARATH Probable galacturonosyltransferase-like 8 OS=Arabidopsis thaliana GN=GATL8 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHD2|GATLA_ARATH Probable galacturonosyltransferase-like 10 OS=Arabidopsis thaliana GN=GATL10 PE=2 SV=1 Back     alignment and function description
>sp|O04253|GATL6_ARATH Probable galacturonosyltransferase-like 6 OS=Arabidopsis thaliana GN=GATL6 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYF4|GATL7_ARATH Probable galacturonosyltransferase-like 7 OS=Arabidopsis thaliana GN=GATL7 PE=2 SV=1 Back     alignment and function description
>sp|Q9FWY9|GATL5_ARATH Probable galacturonosyltransferase-like 5 OS=Arabidopsis thaliana GN=GATL5 PE=2 SV=1 Back     alignment and function description
>sp|Q9M8J2|GATL4_ARATH Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana GN=GATL4 PE=2 SV=1 Back     alignment and function description
>sp|Q9S7G2|GATL2_ARATH Probable galacturonosyltransferase-like 2 OS=Arabidopsis thaliana GN=GATL2 PE=2 SV=1 Back     alignment and function description
>sp|Q9LN68|GATL1_ARATH Probable galacturonosyltransferase-like 1 OS=Arabidopsis thaliana GN=GATL1 PE=2 SV=1 Back     alignment and function description
>sp|Q0V7R1|GATL3_ARATH Probable galacturonosyltransferase-like 3 OS=Arabidopsis thaliana GN=GATL3 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
225424803386 PREDICTED: probable galacturonosyltransf 0.994 0.976 0.772 1e-173
255558356404 transferase, transferring glycosyl group 0.955 0.896 0.768 1e-163
224100379383 glycosyltransferase, CAZy family GT8 [Po 0.957 0.947 0.734 1e-162
297838789384 hypothetical protein ARALYDRAFT_476133 [ 0.973 0.960 0.740 1e-161
18409445390 putative galacturonosyltransferase-like 0.944 0.917 0.735 1e-160
297850896389 hypothetical protein ARALYDRAFT_472678 [ 0.976 0.951 0.718 1e-158
224100215378 glycosyltransferase, CAZy family GT8 [Po 0.955 0.957 0.748 1e-156
357486289395 Glycosyltransferase CAZy family GT8 [Med 0.968 0.929 0.713 1e-156
356501962378 PREDICTED: probable galacturonosyltransf 0.923 0.925 0.742 1e-154
15221684393 putative galacturonosyltransferase-like 0.976 0.941 0.701 1e-154
>gi|225424803|ref|XP_002271160.1| PREDICTED: probable galacturonosyltransferase-like 9-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  612 bits (1578), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 299/387 (77%), Positives = 336/387 (86%), Gaps = 10/387 (2%)

Query: 1   MVGFRQ---YVAVL-LVLSAPFCLGIRSIPSRSIDGGDF--LGFDRFTEAPDYRNGRGCP 54
           M+GF     ++AVL  +L +P CLGIRS P R + GGD+   GF RF EAPDYRNG  CP
Sbjct: 1   MLGFGLNPVHLAVLAFILFSPVCLGIRSFPGRDVAGGDYGYEGFFRFAEAPDYRNGEECP 60

Query: 55  VSANK-ITSSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSAS 113
              +K   SSCDPSLVH+AMTLDSEYLRGSIAAVHS L+H+SCPEN+FFHFI+AEFD AS
Sbjct: 61  AKGHKGYVSSCDPSLVHIAMTLDSEYLRGSIAAVHSILRHSSCPENVFFHFIAAEFDPAS 120

Query: 114 PRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDR 173
           PRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIR ALENPLNYARNYLGDILDPCV+R
Sbjct: 121 PRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSIRSALENPLNYARNYLGDILDPCVER 180

Query: 174 VIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRK 233
           VIYIDSDLV+VDDI KLW+ITLT+S++IGAPEYCHA F KYFTD FWSD +L RVF SRK
Sbjct: 181 VIYIDSDLVVVDDIRKLWNITLTESRVIGAPEYCHAVFEKYFTDEFWSDSVLPRVFDSRK 240

Query: 234 PCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHR 293
           PCYFNTGVMVMDLVRWRKGNYR++IENWME+QRR+RIY+LGSLPPFLLVFAGNVEAIDHR
Sbjct: 241 PCYFNTGVMVMDLVRWRKGNYRRKIENWMELQRRRRIYELGSLPPFLLVFAGNVEAIDHR 300

Query: 294 WNQHGLGGDNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFK-HS 352
           WNQHGLGGDNVKGSCR LHPGPVSLLHWSGKGKPW RLD ++PCP+D+LWEPYDL+K H 
Sbjct: 301 WNQHGLGGDNVKGSCRPLHPGPVSLLHWSGKGKPWSRLDARKPCPVDHLWEPYDLYKPHR 360

Query: 353 NRIKDHHQSSVLFPPSSSSLIGFSSFL 379
           N   +H Q  +L   SSS+L+G+S++ 
Sbjct: 361 NHRLNHQQ--MLLSASSSTLVGYSNYF 385

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255558356|ref|XP_002520205.1| transferase, transferring glycosyl groups, putative [Ricinus communis] gi|223540697|gb|EEF42260.1| transferase, transferring glycosyl groups, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224100379|ref|XP_002311853.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi|222851673|gb|EEE89220.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297838789|ref|XP_002887276.1| hypothetical protein ARALYDRAFT_476133 [Arabidopsis lyrata subsp. lyrata] gi|297333117|gb|EFH63535.1| hypothetical protein ARALYDRAFT_476133 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|18409445|ref|NP_564983.1| putative galacturonosyltransferase-like 9 [Arabidopsis thaliana] gi|186494322|ref|NP_001117576.1| putative galacturonosyltransferase-like 9 [Arabidopsis thaliana] gi|75097066|sp|O04536.1|GATL9_ARATH RecName: Full=Probable galacturonosyltransferase-like 9; AltName: Full=Like glycosyl transferase 8 gi|13878003|gb|AAK44079.1|AF370264_1 unknown protein [Arabidopsis thaliana] gi|2194142|gb|AAB61117.1| ESTs gb|N38288,gb|T43486,gb|AA395242 come from this gene [Arabidopsis thaliana] gi|17104733|gb|AAL34255.1| unknown protein [Arabidopsis thaliana] gi|332196894|gb|AEE35015.1| putative galacturonosyltransferase-like 9 [Arabidopsis thaliana] gi|332196895|gb|AEE35016.1| putative galacturonosyltransferase-like 9 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297850896|ref|XP_002893329.1| hypothetical protein ARALYDRAFT_472678 [Arabidopsis lyrata subsp. lyrata] gi|297339171|gb|EFH69588.1| hypothetical protein ARALYDRAFT_472678 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|224100215|ref|XP_002311789.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] gi|222851609|gb|EEE89156.1| glycosyltransferase, CAZy family GT8 [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357486289|ref|XP_003613432.1| Glycosyltransferase CAZy family GT8 [Medicago truncatula] gi|355514767|gb|AES96390.1| Glycosyltransferase CAZy family GT8 [Medicago truncatula] Back     alignment and taxonomy information
>gi|356501962|ref|XP_003519792.1| PREDICTED: probable galacturonosyltransferase-like 9-like [Glycine max] Back     alignment and taxonomy information
>gi|15221684|ref|NP_173827.1| putative galacturonosyltransferase-like 8 [Arabidopsis thaliana] gi|75098479|sp|O48684.1|GATL8_ARATH RecName: Full=Probable galacturonosyltransferase-like 8; AltName: Full=Like glycosyl transferase 9 gi|2829871|gb|AAC00579.1| Hypothetical protein [Arabidopsis thaliana] gi|26453138|dbj|BAC43645.1| putative glycosyl transferase [Arabidopsis thaliana] gi|332192370|gb|AEE30491.1| putative galacturonosyltransferase-like 8 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query379
TAIR|locus:2020638390 LGT8 "glucosyl transferase fam 0.920 0.894 0.770 3.7e-151
TAIR|locus:2032357393 LGT9 [Arabidopsis thaliana (ta 0.918 0.885 0.739 6.4e-147
TAIR|locus:2095420365 GATL10 "galacturonosyltransfer 0.910 0.945 0.627 1.5e-122
TAIR|locus:2132218346 GATL6 "galacturonosyltransfera 0.804 0.881 0.675 6.2e-117
TAIR|locus:2081670361 GATL7 "galacturonosyltransfera 0.807 0.847 0.675 2.7e-116
TAIR|locus:2024740361 GATL5 "galacturonosyltransfera 0.817 0.858 0.643 8.4e-113
TAIR|locus:2205314345 GATL3 "galacturonosyltransfera 0.823 0.904 0.611 1.4e-105
TAIR|locus:2016432351 PARVUS "AT1G19300" [Arabidopsi 0.812 0.877 0.606 2.8e-105
TAIR|locus:2082450351 GATL4 "galacturonosyltransfera 0.788 0.851 0.591 1.6e-104
TAIR|locus:2101724341 GATL2 "galacturonosyltransfera 0.823 0.914 0.579 5.4e-102
TAIR|locus:2020638 LGT8 "glucosyl transferase family 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1475 (524.3 bits), Expect = 3.7e-151, P = 3.7e-151
 Identities = 275/357 (77%), Positives = 306/357 (85%)

Query:     9 AVLLVLSAPFCLGIRSIPSR--SIDGGDFLGFD--RFTEAPDYRNGRGC-PVSANK--IT 61
             A+ LV    F +GIR IP R  ++      GFD   F EAP+YRNG+ C   S N+    
Sbjct:    15 AIFLVFIPLFSVGIRMIPGRLTAVSATVGNGFDLGSFVEAPEYRNGKECVSQSLNRENFV 74

Query:    62 SSCDPSLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLV 121
             SSCD SLVHVAMTLDSEYLRGSIAAVHS L+HASCPEN+FFH I+AEFD ASPRVL+QLV
Sbjct:    75 SSCDASLVHVAMTLDSEYLRGSIAAVHSMLRHASCPENVFFHLIAAEFDPASPRVLSQLV 134

Query:   122 RSTFPSLNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDL 181
             RSTFPSLNFKVYIFREDTVINLISSSIR+ALENPLNYARNYLGDILDPCVDRVIY+DSD+
Sbjct:   135 RSTFPSLNFKVYIFREDTVINLISSSIRQALENPLNYARNYLGDILDPCVDRVIYLDSDI 194

Query:   182 VLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGV 241
             ++VDDI KLW+ +LT S+IIGAPEYCHANFTKYFT  FWSDP L   F  RKPCYFNTGV
Sbjct:   195 IVVDDITKLWNTSLTGSRIIGAPEYCHANFTKYFTSGFWSDPALPGFFSGRKPCYFNTGV 254

Query:   242 MVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGG 301
             MVMDLVRWR+GNYR+++E WM+IQ++KRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGG
Sbjct:   255 MVMDLVRWREGNYREKLETWMQIQKKKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGG 314

Query:   302 DNVKGSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS-NRIKD 357
             DNV+GSCRSLH GPVSLLHWSGKGKPWVRLD K+PCPLD+LWEPYDL++H   R KD
Sbjct:   315 DNVRGSCRSLHKGPVSLLHWSGKGKPWVRLDEKRPCPLDHLWEPYDLYEHKIERAKD 371
GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0016051 "carbohydrate biosynthetic process" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA;ISS
GO:0016758 "transferase activity, transferring hexosyl groups" evidence=ISS
GO:0047262 "polygalacturonate 4-alpha-galacturonosyltransferase activity" evidence=ISS
TAIR|locus:2032357 LGT9 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2095420 GATL10 "galacturonosyltransferase-like 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132218 GATL6 "galacturonosyltransferase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2081670 GATL7 "galacturonosyltransferase-like 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024740 GATL5 "galacturonosyltransferase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2205314 GATL3 "galacturonosyltransferase-like 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2016432 PARVUS "AT1G19300" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2082450 GATL4 "galacturonosyltransferase-like 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101724 GATL2 "galacturonosyltransferase-like 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
O04536GATL9_ARATH2, ., 4, ., 1, ., -0.73540.94450.9179yesno
O48684GATL8_ARATH2, ., 4, ., 1, ., -0.70100.97620.9414nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
pfam01501248 pfam01501, Glyco_transf_8, Glycosyl transferase fa 7e-66
cd06429257 cd06429, GT8_like_1, GT8_like_1 represents a subfa 6e-32
cd04194248 cd04194, GT8_A4GalT_like, A4GalT_like proteins cat 2e-26
PLN02829639 PLN02829, PLN02829, Probable galacturonosyltransfe 3e-23
PLN02742534 PLN02742, PLN02742, Probable galacturonosyltransfe 4e-23
PLN02870533 PLN02870, PLN02870, Probable galacturonosyltransfe 3e-22
cd00505246 cd00505, Glyco_transf_8, Members of glycosyltransf 8e-22
PLN02867535 PLN02867, PLN02867, Probable galacturonosyltransfe 8e-21
PLN02910657 PLN02910, PLN02910, polygalacturonate 4-alpha-gala 9e-21
PLN02659534 PLN02659, PLN02659, Probable galacturonosyltransfe 5e-20
PLN02523559 PLN02523, PLN02523, galacturonosyltransferase 2e-19
PLN02718603 PLN02718, PLN02718, Probable galacturonosyltransfe 1e-18
PLN02769629 PLN02769, PLN02769, Probable galacturonosyltransfe 3e-12
COG1442325 COG1442, RfaJ, Lipopolysaccharide biosynthesis pro 5e-12
cd06431280 cd06431, GT8_LARGE_C, LARGE catalytic domain has c 4e-06
cd02537240 cd02537, GT8_Glycogenin, Glycogenin belongs the GT 0.001
cd06430304 cd06430, GT8_like_2, GT8_like_2 represents a subfa 0.002
cd06432248 cd06432, GT8_HUGT1_C_like, The C-terminal domain o 0.003
>gnl|CDD|216536 pfam01501, Glyco_transf_8, Glycosyl transferase family 8 Back     alignment and domain information 
 Score =  209 bits (533), Expect = 7e-66
 Identities = 76/265 (28%), Positives = 122/265 (46%), Gaps = 19/265 (7%)

Query: 70  HVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVR--STFPS 127
            + + LD  Y+ G+   + S L H S P ++ FH ++ +    +   L  L    S    
Sbjct: 1   VIVLALDDNYVLGAGVLIKSLLLHNSDPLHLLFHILTDDVSEENREKLNALGSQVSEVDV 60

Query: 128 LNFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDI 187
           L F            L    + +   + LNYAR YL D+  P  D+++Y+D+D++++ D+
Sbjct: 61  LEFSDIEMLSY----LTLQLLLKKYWSLLNYARLYLADLF-PKYDKILYLDADIIVLGDL 115

Query: 188 HKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLV 247
            +L+DI L   K+  A E              W    LS   G   PCYFN GV+V++L 
Sbjct: 116 DELFDIDL-GGKVAAAVEDF--------DRYPWFKEALSAELGIPPPCYFNAGVLVINLK 166

Query: 248 RWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGS 307
           +WR+ N  +++  W+       +  LG      +VF G V+ +  R+N HGLG  +    
Sbjct: 167 KWREENLTEKLIEWLNK--NGGLLKLGDQDILNIVFKGKVKPLPPRYNVHGLGYYS-YKK 223

Query: 308 CRSLHPGPVSLLHWSGKGKPWVRLD 332
            R L P    ++H+ G  KPW  L 
Sbjct: 224 RRKLIPENPKVIHYIGPTKPWHDLA 248

This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. Length = 248
>gnl|CDD|133051 cd06429, GT8_like_1, GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>gnl|CDD|133037 cd04194, GT8_A4GalT_like, A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>gnl|CDD|215443 PLN02829, PLN02829, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215395 PLN02742, PLN02742, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215468 PLN02870, PLN02870, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|132996 cd00505, Glyco_transf_8, Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>gnl|CDD|178458 PLN02867, PLN02867, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215493 PLN02910, PLN02910, polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215356 PLN02659, PLN02659, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215286 PLN02523, PLN02523, galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|178320 PLN02718, PLN02718, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|215412 PLN02769, PLN02769, Probable galacturonosyltransferase Back     alignment and domain information
>gnl|CDD|224359 COG1442, RfaJ, Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|133053 cd06431, GT8_LARGE_C, LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis Back     alignment and domain information
>gnl|CDD|133018 cd02537, GT8_Glycogenin, Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information
>gnl|CDD|133052 cd06430, GT8_like_2, GT8_like_2 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>gnl|CDD|133054 cd06432, GT8_HUGT1_C_like, The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 379
PRK15171334 lipopolysaccharide 1,3-galactosyltransferase; Prov 100.0
cd06429257 GT8_like_1 GT8_like_1 represents a subfamily of GT 100.0
PLN02718603 Probable galacturonosyltransferase 100.0
PLN02523559 galacturonosyltransferase 100.0
PLN02829639 Probable galacturonosyltransferase 100.0
PLN02742534 Probable galacturonosyltransferase 100.0
PLN02910657 polygalacturonate 4-alpha-galacturonosyltransferas 100.0
cd06431280 GT8_LARGE_C LARGE catalytic domain has closest hom 100.0
PLN02870533 Probable galacturonosyltransferase 100.0
COG1442325 RfaJ Lipopolysaccharide biosynthesis proteins, LPS 100.0
PLN02659534 Probable galacturonosyltransferase 100.0
cd00505246 Glyco_transf_8 Members of glycosyltransferase fami 100.0
PLN02769629 Probable galacturonosyltransferase 100.0
cd04194248 GT8_A4GalT_like A4GalT_like proteins catalyze the 100.0
PLN02867535 Probable galacturonosyltransferase 100.0
cd06430304 GT8_like_2 GT8_like_2 represents a subfamily of GT 100.0
PF01501250 Glyco_transf_8: Glycosyl transferase family 8; Int 100.0
cd06432248 GT8_HUGT1_C_like The C-terminal domain of HUGT1-li 100.0
cd02537240 GT8_Glycogenin Glycogenin belongs the GT 8 family 99.97
PLN00176333 galactinol synthase 99.97
cd06914278 GT8_GNT1 GNT1 is a fungal enzyme that belongs to t 99.91
KOG18791470 consensus UDP-glucose:glycoprotein glucosyltransfe 99.46
COG5597368 Alpha-N-acetylglucosamine transferase [Cell envelo 98.96
PF11051271 Mannosyl_trans3: Mannosyltransferase putative; Int 96.8
PF03407212 Nucleotid_trans: Nucleotide-diphospho-sugar transf 96.58
PLN03182429 xyloglucan 6-xylosyltransferase; Provisional 95.82
PF05637239 Glyco_transf_34: galactosyl transferase GMA12/MNN1 93.45
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 89.39
KOG1950369 consensus Glycosyl transferase, family 8 - glycoge 86.22
PLN03181453 glycosyltransferase; Provisional 81.38
cd06423180 CESA_like CESA_like is the cellulose synthase supe 80.81
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 80.12
>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3.5e-51  Score=401.26  Aligned_cols=267  Identities=18%  Similarity=0.300  Sum_probs=207.6

Q ss_pred             CceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhh
Q 047424           67 SLVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISS  146 (379)
Q Consensus        67 ~~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~  146 (379)
                      +.||||+++|++|+++++|+|.||++|+++ ..++|||+++++++++++.|+++..+.  +.++.++.+|.+.+.+..+ 
T Consensus        24 ~~i~Iv~~~D~ny~~~~~vsi~Sil~nn~~-~~~~f~Il~~~is~e~~~~l~~l~~~~--~~~i~~~~id~~~~~~~~~-   99 (334)
T PRK15171         24 NSLDIAYGIDKNFLFGCGVSIASVLLNNPD-KSLVFHVFTDYISDADKQRFSALAKQY--NTRINIYLINCERLKSLPS-   99 (334)
T ss_pred             CceeEEEECcHhhHHHHHHHHHHHHHhCCC-CCEEEEEEeCCCCHHHHHHHHHHHHhc--CCeEEEEEeCHHHHhCCcc-
Confidence            589999999999999999999999999764 679999999999999999999887553  3477888888777765533 


Q ss_pred             hhHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhh
Q 047424          147 SIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLS  226 (379)
Q Consensus       147 ~i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~  226 (379)
                         ..+++.++|+||++|++||++++||||||+|+||++||++||++|++++.++||+.++...   +     |.+. ..
T Consensus       100 ---~~~~s~atY~Rl~ip~llp~~~dkvLYLD~Diiv~~dl~~L~~~dl~~~~~aav~~d~~~~---~-----~~~~-~~  167 (334)
T PRK15171        100 ---TKNWTYATYFRFIIADYFIDKTDKVLYLDADIACKGSIKELIDLDFAENEIAAVVAEGDAE---W-----WSKR-AQ  167 (334)
T ss_pred             ---cCcCCHHHHHHHHHHHhhhhhcCEEEEeeCCEEecCCHHHHHhccCCCCeEEEEEeccchh---H-----HHHH-HH
Confidence               2356789999999999999779999999999999999999999999977888886553211   1     1111 11


Q ss_pred             hhcC-CCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceecccccccccCCCCCcc
Q 047424          227 RVFG-SRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVK  305 (379)
Q Consensus       227 ~~~~-~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~~~  305 (379)
                      +... +....|||||||||||++||++++++++++++........+..+|||+||.+|.|+|+.||++||++........
T Consensus       168 ~l~~~~~~~~YFNsGVlliNl~~wRe~~i~~k~~~~l~~~~~~~~~~~~DQDiLN~~~~~~~~~L~~~wN~~~~~~~~~~  247 (334)
T PRK15171        168 SLQTPGLASGYFNSGFLLINIPAWAQENISAKAIEMLADPEIVSRITHLDQDVLNILLAGKVKFIDAKYNTQFSLNYELK  247 (334)
T ss_pred             hcCCccccccceecceEEEcHHHHHHhhHHHHHHHHHhccccccceeecChhHHHHHHcCCeEECCHhhCCccchhHHHH
Confidence            1111 112469999999999999999999999999998643111234479999999999999999999999742111111


Q ss_pred             cccccCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCc
Q 047424          306 GSCRSLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS  352 (379)
Q Consensus       306 ~~~~~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~  352 (379)
                      ..+......+++||||+|+.|||+..+   .+|+.++||+|...+|.
T Consensus       248 ~~~~~~~~~~p~IIHy~G~~KPW~~~~---~~~~~~~f~~~~~~spw  291 (334)
T PRK15171        248 DSVINPVNDETVFIHYIGPTKPWHSWA---DYPVSQYFLKAKEASPW  291 (334)
T ss_pred             hcccccccCCCEEEEECCCCCCCCCCC---CCchHHHHHHHHhcCCC
Confidence            111111124579999999999998643   35789999999999998

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>PLN02718 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02523 galacturonosyltransferase Back     alignment and domain information
>PLN02829 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02742 Probable galacturonosyltransferase Back     alignment and domain information
>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase Back     alignment and domain information
>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis Back     alignment and domain information
>PLN02870 Probable galacturonosyltransferase Back     alignment and domain information
>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PLN02659 Probable galacturonosyltransferase Back     alignment and domain information
>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis Back     alignment and domain information
>PLN02769 Probable galacturonosyltransferase Back     alignment and domain information
>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface Back     alignment and domain information
>PLN02867 Probable galacturonosyltransferase Back     alignment and domain information
>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function Back     alignment and domain information
>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd06432 GT8_HUGT1_C_like The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family Back     alignment and domain information
>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen Back     alignment and domain information
>PLN00176 galactinol synthase Back     alignment and domain information
>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family Back     alignment and domain information
>KOG1879 consensus UDP-glucose:glycoprotein glucosyltransferase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG5597 Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF11051 Mannosyl_trans3: Mannosyltransferase putative; InterPro: IPR022751 Alpha-mannosyltransferase is responsible for the addition of residues to the outer chain of core N-linked polysaccharides and to O-linked mannotriose Back     alignment and domain information
>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases [] Back     alignment and domain information
>PLN03182 xyloglucan 6-xylosyltransferase; Provisional Back     alignment and domain information
>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>KOG1950 consensus Glycosyl transferase, family 8 - glycogenin [Carbohydrate transport and metabolism] Back     alignment and domain information
>PLN03181 glycosyltransferase; Provisional Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
1ss9_A311 Crystal Structural Analysis Of Active Site Mutant Q 6e-06
1g9r_A311 Crystal Structure Of Galactosyltransferase Lgtc In 7e-06
>pdb|1SS9|A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc Length = 311 Back     alignment and structure 
Iteration: 1

 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 24/185 (12%)
Query: 157 NYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFT 216
            YAR  LG+ +  C D+V+Y+D D+++ D +  LWD  L  +  +GA   C   F +   
Sbjct: 83  TYARLKLGEYIADC-DKVLYLDIDVLVRDSLTPLWDTDLGDN-WLGA---CIDLFVER-- 135
Query: 217 DNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSL 276
                +    ++  +    YFN GV++++L +WR+ +  K    W+E  +    Y    +
Sbjct: 136 ----QEGYKQKIGMADGEYYFNAGVLLINLKKWRRHDIFKMSCEWVEQYKDVMQYQDEDI 191
Query: 277 PPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSCRSLHPG-----------PVSLLHWSGKG 325
              L  F G V   + R+N        +     S H             PV++ H+ G  
Sbjct: 192 LNGL--FKGGVCYANSRFNFMPTNYAFMANRFASRHTDPLYRDRTNTVMPVAVSHYCGPA 249
Query: 326 KPWVR 330
           KPW R
Sbjct: 250 KPWHR 254
>pdb|1G9R|A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose Length = 311 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query379
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 4e-62
3tzt_A276 Glycosyl transferase family 8; structural genomics 1e-48
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
3u2u_A263 Glycogenin-1, GN-1, GN1; structural genomics, stru 4e-04
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Length = 311 Back     alignment and structure
 Score =  200 bits (511), Expect = 4e-62
 Identities = 55/289 (19%), Positives = 98/289 (33%), Gaps = 33/289 (11%)

Query: 69  VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSL 128
           + +    D  Y      A  S          I FH + A    A+   +   +R    ++
Sbjct: 1   MDIVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGGNI 59

Query: 129 NFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIH 188
            F       +         +     +   YAR  LG+ +    D+V+Y+D D+++ D + 
Sbjct: 60  RF--IDVNPEDFAGF---PLNIRHISITTYARLKLGEYI-ADCDKVLYLDIDVLVRDSLT 113

Query: 189 KLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVR 248
            LWD  L  + +  + +        Y      +D             YFN GV++++L +
Sbjct: 114 PLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADG----------EYYFNAGVLLINLKK 163

Query: 249 WRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSC 308
           WR+ +  K    W+E  +    Y    +     +F G V   + R+N        +    
Sbjct: 164 WRRHDIFKMSSEWVEQYKDVMQYQDQDILNG--LFKGGVCYANSRFNFMPTNYAFMANWF 221

Query: 309 RSLHPGP-----------VSLLHWSGKGKPWVRLDNKQPCPLDYLWEPY 346
            S H  P           V++ H+ G  KPW R            +   
Sbjct: 222 ASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTA---WGAERFTEL 267
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} Length = 276 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Length = 263 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
3tzt_A276 Glycosyl transferase family 8; structural genomics 100.0
1g9r_A311 Glycosyl transferase; alpha-beta structure; HET: U 100.0
1ll2_A333 Glycogenin-1; protein-substrate complex, beta-alph 99.97
3u2u_A263 Glycogenin-1, GN-1, GN1; structural genomics, stru 99.96
2d7i_A 570 Polypeptide N-acetylgalactosaminyltransferase 10; 87.62
1xhb_A 472 Polypeptide N-acetylgalactosaminyltransferase 1; g 86.91
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0 Back     alignment and structure
Probab=100.00  E-value=8.3e-49  Score=374.37  Aligned_cols=260  Identities=14%  Similarity=0.217  Sum_probs=186.2

Q ss_pred             ceeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhh
Q 047424           68 LVHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSS  147 (379)
Q Consensus        68 ~i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~  147 (379)
                      .||||+|+|++|+++++|+|+||++|+++ ++++|||+++++++++++.|++++...  +.+++++.++.+.+++...  
T Consensus         5 ~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~-~~~~~~il~~~is~~~~~~L~~~~~~~--~~~i~~~~~~~~~~~~~~~--   79 (276)
T 3tzt_A            5 ADALLLTLDENYIPQMKVLMTSIYINNPG-RIFDVYLIHSRISEDKLKDLGEDLKKF--SYTLYPIRATDDLFSFAKV--   79 (276)
T ss_dssp             CEEEEEECCGGGHHHHHHHHHHHHHHSTT-CCEEEEEEESCCCHHHHHHHHHHHHTT--TCEEEEEECC-----------
T ss_pred             eEEEEEEeCHhHHHHHHHHHHHHHHhCCC-CceEEEEEeCCCCHHHHHHHHHHHHHc--CCEEEEEEeCHHHHhcCcc--
Confidence            59999999999999999999999999985 789999999999999999999987642  4677888888765554322  


Q ss_pred             hHhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccC-cccccccCCCCChhhh
Q 047424          148 IREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHAN-FTKYFTDNFWSDPLLS  226 (379)
Q Consensus       148 i~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~-~~~y~~~~~w~~~~l~  226 (379)
                        ..+.++.+|+||++|+++|++++||||||+|+||++||++||++|++|.. +||+++|... +.+++    +     .
T Consensus        80 --~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~di~~L~~~dl~~~~-~aav~d~~~~~~~~~~----~-----~  147 (276)
T 3tzt_A           80 --TDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVINPLDDLLRTDISDYI-LAAASHTGKTDMANNV----N-----R  147 (276)
T ss_dssp             ------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECSCSHHHHTCCCTTSS-EEEEEC---------------------
T ss_pred             --ccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecCCHHHHhhcCCCCCe-EEEEEecccchHHHHH----H-----H
Confidence              23457899999999999997799999999999999999999999999654 4555555422 11111    1     0


Q ss_pred             hhcCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceeccc-ccccccCCCCC--
Q 047424          227 RVFGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDH-RWNQHGLGGDN--  303 (379)
Q Consensus       227 ~~~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~-~wN~~~~~~~~--  303 (379)
                      ..+ +...+||||||||||+++||+.+++++++++++++...  ...+|||+||.+|.|+++.||+ +||++......  
T Consensus       148 ~~l-~~~~~yfNsGV~linl~~~R~~~~~~~~~~~~~~~~~~--~~~~DQd~LN~~f~~~~~~Lp~~~wN~~~~~~~~~~  224 (276)
T 3tzt_A          148 IRL-GTDTDYYNSGLLLINLKRAREEIDPDEIFSFVEDNHMN--LLLPDQDILNAMYGDRIYPLDDLIYNYDARNYSSYL  224 (276)
T ss_dssp             ---------CEEEEEEEEEHHHHHHHCCHHHHHHHHHHC----------CHHHHHHHGGGEEEEEHHHHSEETTCHHHHH
T ss_pred             hcC-CCCCCeEEeeEEEEEHHHHHhhhHHHHHHHHHHhcccc--ccCCChhHHHHHHhCCEEECCchheeeecccchhhh
Confidence            011 22358999999999999999999999999999876543  3458999999999999999999 99998621100  


Q ss_pred             cc--cccc-cCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccC
Q 047424          304 VK--GSCR-SLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFK  350 (379)
Q Consensus       304 ~~--~~~~-~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~  350 (379)
                      ..  +... .....+++||||+|..|||+....   ++++++||+|....
T Consensus       225 ~~~~~~~~~~~~~~~~~iiHy~g~~KPW~~~~~---~~~~~~w~~Y~~~~  271 (276)
T 3tzt_A          225 IRSKKQADLAWLMDHTVVLHFCGRDKPWKKNHR---NKFTSLYKHYMSLT  271 (276)
T ss_dssp             HHTTTCCSHHHHHHHCCEEECCSSCCTTSTTCC---STTHHHHHHHHHHH
T ss_pred             ccccchhhhhhhccCCeEEEECCCCCCcCCCCC---CchHHHHHHHHHHH
Confidence            00  0000 000134789999999999998643   47999999998653
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A* Back     alignment and structure
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A* Back     alignment and structure
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 379
d1ga8a_282 c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseri 2e-34
d1ll2a_263 c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cun 4e-07
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Length = 282 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

 Score =  126 bits (317), Expect = 2e-34
 Identities = 55/296 (18%), Positives = 99/296 (33%), Gaps = 32/296 (10%)

Query: 69  VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSL 128
           + +    D  Y      A  S          I FH + A    A+   +   +R    ++
Sbjct: 1   MDIVFAADDNYAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGGGNI 59

Query: 129 NFKVYIFREDTVINLISSSIREALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIH 188
            F       +       +       +   YAR  LG+      D+V+Y+D D+++ D + 
Sbjct: 60  RF--IDVNPEDFAGFPLNIRHI---SITTYARLKLGEY-IADCDKVLYLDIDVLVRDSLT 113

Query: 189 KLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRVFGSRKPCYFNTGVMVMDLVR 248
            LWD  L  + +  + +        Y      +D             YFN GV++++L +
Sbjct: 114 PLWDTDLGDNWLGASIDLFVERQEGYKQKIGMADG----------EYYFNAGVLLINLKK 163

Query: 249 WRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDNVKGSC 308
           WR+ +  K    W+E  +    Y    +     +F G V   + R+N        +    
Sbjct: 164 WRRHDIFKMSSEWVEQYKDVMQYQDQDILN--GLFKGGVCYANSRFNFMPTNYAFMANWF 221

Query: 309 RSLHP-----------GPVSLLHWSGKGKPWVRLDNKQPCPL--DYLWEPYDLFKH 351
            S H             PV++ H+ G  KPW R           +       + + 
Sbjct: 222 ASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCTAWGAERFTELAGSLTTVPEE 277
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 263 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query379
d1ga8a_282 Galactosyltransferase LgtC {Neisseria meningitidis 100.0
d1ll2a_263 Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 99.96
d1o7qa_287 alpha-1,3-galactosyltransferase catalytic domain { 95.3
d1lzia_283 Glycosyltransferase A catalytic domain {Human (Hom 94.95
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 92.76
d1s4na_339 Glycolipid 2-alpha-mannosyltransferase {Baker's ye 91.38
>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=100.00  E-value=9.5e-47  Score=357.53  Aligned_cols=262  Identities=20%  Similarity=0.272  Sum_probs=200.3

Q ss_pred             eeEEEEeCCcchhhHHHHHHHHHHhcCCCCcEEEEEEecCCCCcchHHHHHHHHhcCCceeEEEEEechhhHHhhhhhhh
Q 047424           69 VHVAMTLDSEYLRGSIAAVHSALKHASCPENIFFHFISAEFDSASPRVLTQLVRSTFPSLNFKVYIFREDTVINLISSSI  148 (379)
Q Consensus        69 i~I~~~~D~~Yl~~~~v~i~Sil~~~~~~~~i~fhil~~~~s~~~~~~L~~~~~~~~~~l~~~~~~~d~~~~~~~is~~i  148 (379)
                      ||||+|+|++|+.+++|+++||++|++. ++++|||+++++++++++.|++.+....  .+++++.++...+.+...   
T Consensus         1 mnIv~~~D~nY~~~~~~~i~SL~~~~~~-~~~~~~il~~~~~~~~~~~l~~~~~~~~--~~i~~~~~~~~~~~~~~~---   74 (282)
T d1ga8a_           1 MDIVFAADDNYAAYLCVAAKSVEAAHPD-TEIRFHVLDAGISEANRAAVAANLRGGG--GNIRFIDVNPEDFAGFPL---   74 (282)
T ss_dssp             CEEEEEECGGGHHHHHHHHHHHHHHCTT-SCCEEEEEESSCCHHHHHHHHHTSGGGT--TTEEEEECCGGGGTTSCC---
T ss_pred             CEEEEECCHHHHHHHHHHHHHHHHHCcC-CCEEEEEEcCCCCHHHHHHHHHHHHHcC--CeEEEEECCchHhccccc---
Confidence            7999999999999999999999998764 7899999999999999888888775543  456667777655433221   


Q ss_pred             HhhhcCcchhHHhhhhhhccccCCeEEEEecceEEecchHhHhccCCCCCeeEeeccccccCcccccccCCCCChhhhhh
Q 047424          149 REALENPLNYARNYLGDILDPCVDRVIYIDSDLVLVDDIHKLWDITLTKSKIIGAPEYCHANFTKYFTDNFWSDPLLSRV  228 (379)
Q Consensus       149 ~~~~~s~~~y~Rl~lp~lLp~~~~RVLYLDsDvIV~~DI~eL~~~dl~~~~~~aa~e~~~~~~~~y~~~~~w~~~~l~~~  228 (379)
                      ...+.++++|+||++|++||+ ++||||||+|+||++||++||++++++..++|+++........+          ..+.
T Consensus        75 ~~~~~s~~~y~Rl~l~~~lp~-~~kiiyLD~D~iv~~dl~~L~~~~~~~~~~aa~~d~~~~~~~~~----------~~~~  143 (282)
T d1ga8a_          75 NIRHISITTYARLKLGEYIAD-CDKVLYLDIDVLVRDSLTPLWDTDLGDNWLGASIDLFVERQEGY----------KQKI  143 (282)
T ss_dssp             CCTTCCGGGGGGGGHHHHCCS-CSCEEEECSSEEECSCCHHHHTCCCTTCSEEEEECHHHHTSTTH----------HHHT
T ss_pred             cccccCHHHHHHHHHhhhCCc-cceEEEecCCEEEecchHHHHhcccccceeeeehhhhhhhhhhh----------HHHh
Confidence            123457899999999999997 99999999999999999999999999766666655432221111          1111


Q ss_pred             cCCCCCccceeeeEEEecHHHhhhhHHHHHHHHHHHhccccCCCCCCchHHHHhcccCceecccccccccCCCCC----c
Q 047424          229 FGSRKPCYFNTGVMVMDLVRWRKGNYRKRIENWMEIQRRKRIYDLGSLPPFLLVFAGNVEAIDHRWNQHGLGGDN----V  304 (379)
Q Consensus       229 ~~~~~~~YFNSGVmLinL~kwR~~~~~~~~~~~~~~~~~~~~~~~gdqd~lN~vf~g~i~~L~~~wN~~~~~~~~----~  304 (379)
                      ......+||||||||+|+++||+.+++++++++++++...  ...+||++||.+|.|++..||.+||++..++..    .
T Consensus       144 ~~~~~~~yfNsGVml~n~~~~r~~~~~~~~~~~~~~~~~~--~~~~DQd~LN~~f~~~~~~L~~~~N~~~~~~~~~~~~~  221 (282)
T d1ga8a_         144 GMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQYKDV--MQYQDQDILNGLFKGGVCYANSRFNFMPTNYAFMANWF  221 (282)
T ss_dssp             TCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHHHTTT--CSSTHHHHHHHHHTTSEEEECGGGSBCHHHHHTCC---
T ss_pred             CCCCCCceeecceeeechhhhhhhhHHHHHHHHHHhcccC--cccCchhHHHHHhcCCEEeCCHHHeecccccccccccc
Confidence            1234678999999999999999999999999999887653  345799999999999999999999997432110    0


Q ss_pred             cc-----ccc--cCCCCCCEEEeccCCCCCCCcCCCCCCCchhhhhhcccccCCc
Q 047424          305 KG-----SCR--SLHPGPVSLLHWSGKGKPWVRLDNKQPCPLDYLWEPYDLFKHS  352 (379)
Q Consensus       305 ~~-----~~~--~l~~~~~~IIHf~G~~KPW~~~~~~~~~~~~~lW~~Y~~~~~~  352 (379)
                      ..     ..+  .....+++||||+|+.|||+....   .++...|++|+.....
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~iiHf~G~~KPW~~~~~---~~~~~~~~~~~~~~~~  273 (282)
T d1ga8a_         222 ASRHTDPLYRDRTNTVMPVAVSHYCGPAKPWHRDCT---AWGAERFTELAGSLTT  273 (282)
T ss_dssp             -CSCCCHHHHHHHSCCSSCSEEECCSSCCTTSTTCC---STTTHHHHHHHTTCSC
T ss_pred             ccccchhhhhhhhhccCCCEEEeeCCCCCCCCCCCC---ChhHHHHHHHHHhhhc
Confidence            00     000  011245799999999999987653   3578999999888654
>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]} Back     information, alignment and structure
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1s4na_ c.68.1.16 (A:) Glycolipid 2-alpha-mannosyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure