Citrus Sinensis ID: 047551

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350--
Protein Sequence
MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGPNVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQEREEFHGAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLENLD
Secondary Structure (PSIPRED)
ccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEcccccccEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHEEcccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccEEEccccccccHccccccccHHHHHHHHHHHHHHHHHHHHccccccccEccccccEEEEEEcccccEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcc
Coil and Loop (DISEMBL)
MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEklgvgdsgpnvssadekrlddqrskpgleklgeglsgersyTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLkvhpdknkapgseEAFKKVCKAFKclsdddsrrhydhvglvdefehnqrhnvrprrrraqhdffddeldpdeifrsffgqqdmfrTTRVyrtrgmrsqereefhgaglNFVFLLQILPFLLIFLLAylpysepdyslhrnfnyqiprttekhgiefyvkspasfdenfphgssaravIEDNVIKDYRNLLWRYCHVELQkrrwnknlptphcnklenld
Flexible Loop (DISEMBL)
MDGNKDEALRCIRIAEeaiasgkkqrALKFIKIAQRLNDNLSVHEVLAACEklgvgdsgpnvssadekrlddqrskpgleklgeglsgersyteEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRklslkvhpdknkapgseeafKKVCKAFKCLSDDDSRRHYDHVglvdefehnqrhnvrprrrraqhdffddeldpdeifrsffgqqdmfrttRVYRTRGMRSQEREEFHGAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVelqkrrwnknlptphcnklenld
Low Complexity Region (SEG)
MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGPNVSSADEKRLDDQRSKPgleklgeglsgeRSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVrprrrrAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQEREEFHGAGLNFVFllqilpfllifllaylpySEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLENLD
Disordered region (IsUnstruct)
********LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGV****************************************HVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSL***************FKKVCKAFKCLSDDDSRRHYDHVGLVDEF******************FFD*ELDPDEIFRSFFGQQDMFRTTRVYRTRG******EEFHGAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKN*************
Disordered Region (DISOPRED)
**GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVL***************************************************LIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYD*************************DFFDDELDPDEIFRSFFG*********************************LLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPAS*************VIEDNVIKDYRNLLWRYCHVELQ*********TPHCNKLENL*
Disordered Region (DISEMBL)
********LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGD*****************SKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHN**********RAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQEREEFHGAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLENLD
Disordered Region (DISPRO)
****KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKL*************************************SYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL*******************QHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTR***********GAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKL**LD
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGPNVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQEREEFHGAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLENLD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	352	2.2.26 [Sep-21-2011]
Q9FH28	354	Chaperone protein dnaJ 49	yes	no	0.968	0.963	0.600	1e-103
Q9QYI4	376	DnaJ homolog subfamily B	yes	no	0.965	0.904	0.335	2e-42
Q7ZXQ8	371	DnaJ homolog subfamily B	N/A	no	0.886	0.840	0.330	6e-42
Q9NXW2	375	DnaJ homolog subfamily B	yes	no	0.880	0.826	0.364	2e-41
Q58DR2	370	DnaJ homolog subfamily B	yes	no	0.892	0.848	0.356	3e-41
Q28I38	375	DnaJ homolog subfamily B	no	no	0.889	0.834	0.307	6e-39
Q149L6	379	DnaJ homolog subfamily B	no	no	0.971	0.902	0.312	3e-36
Q8TBM8	379	DnaJ homolog subfamily B	no	no	0.897	0.833	0.314	5e-36
Q5R6H3	379	DnaJ homolog subfamily B	no	no	0.897	0.833	0.311	7e-35
O13633	403	Uncharacterized J domain-	yes	no	0.815	0.712	0.301	8e-35

>sp|Q9FH28|DNJ49_ARATH Chaperone protein dnaJ 49 OS=Arabidopsis thaliana GN=ATJ49 PE=2 SV=2

 Score =  377 bits (967), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 212/353 (60%), Positives = 269/353 (76%), Gaps = 12/353 (3%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           MDGNKD+A RC+RIAE+AI SG K+RALKFI +A+RLN +LSV E++AAC+ L   DS  
Sbjct: 1   MDGNKDDASRCLRIAEDAIVSGDKERALKFINMAKRLNPSLSVDELVAACDNL---DSVS 57

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCS 120
             SS  EK          LE      +G+  YTEE+V+L+R I RN DYYAILG+E++CS
Sbjct: 58  RNSSVSEKLKTMDGDDDKLE------TGKMKYTEENVDLVRNIIRNNDYYAILGLEKNCS 111

Query: 121 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHN 180
           V+EIRKAYRKLSLKVHPDKNKAPGSEEAFKKV KAF CLSD +SRR +D VG+VDEF+H 
Sbjct: 112 VDEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFDQVGIVDEFDHV 171

Query: 181 Q-RHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQ-DMFRTTRVYRTRGMRSQER-EEFH 237
           Q R+    RR   ++DFFDDE DP+EIFR+ FGQQ ++FR +  YRTR  R+Q R EE +
Sbjct: 172 QRRNRRPRRRYNTRNDFFDDEFDPEEIFRTVFGQQREVFRASHAYRTRQPRNQFREEEIN 231

Query: 238 GAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASF 297
            AG + + ++QILPF L+ LLAYLP+SEPDYSLH+N +YQIP+TT+   I FYV+S ++F
Sbjct: 232 VAGPSCLTIIQILPFFLLLLLAYLPFSEPDYSLHKNQSYQIPKTTQNTEISFYVRSASAF 291

Query: 298 DENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLEN 350
           DE FP  SSARA +E NVIK+Y++ L++ C +ELQKRRWNK +PTPHC +L++
Sbjct: 292 DEKFPLSSSARANLEGNVIKEYKHFLFQSCRIELQKRRWNKKIPTPHCIELQD 344

Have a continuous role in plant development probably in the structural organization of compartments.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9QYI4|DJB12_MOUSE DnaJ homolog subfamily B member 12 OS=Mus musculus GN=Dnajb12 PE=2 SV=2

 Score =  173 bits (439), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/381 (33%), Positives = 191/381 (50%), Gaps = 41/381 (10%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEK--LGVGD- 57
           M+ NKDEA RCI IA +AI S + +RAL+F++ AQRL     V  ++ +  +     GD 
Sbjct: 1   MESNKDEAERCISIALKAIQSNQPERALRFLEKAQRLYPTPRVSALIESLNQKPQSTGDH 60

Query: 58  SGPNVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVER 117
             P  ++    +       P       G    + YT E V  ++++K+ KDYY ILGV R
Sbjct: 61  PQPTDTTHTTTKKAGGTETPSANGEAGGGESAKGYTSEQVAAVKRVKQCKDYYEILGVSR 120

Query: 118 SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF 177
           S S E+++KAYRKL+LK HPDKN APG+ EAFK +  A+  LS+ + R+ YD  G  D+ 
Sbjct: 121 SASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG--DDK 178

Query: 178 EHNQRHNVRPRRRRAQHDF---FDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMR----- 229
               RH        +  DF   F+ ++ P+++F  FFG         VY    MR     
Sbjct: 179 SQAARHG------HSHGDFHRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYQQ 232

Query: 230 SQEREEFHG-AGLN-FVFLLQILPFLLIFLLAYLPYSEPDYSLH--RNFNYQIPRTTEKH 285
            Q+R +  G  GL  FV L+ IL  +L+  L+ L  S P YSL    +  +   R T+  
Sbjct: 233 RQDRRDNQGDGGLGVFVQLMPILILILVSALSQLMVSSPPYSLSPRPSVGHIHKRVTDHL 292

Query: 286 GIEFYVKSPASFDENFPHGSSARAV---IEDNVIKDYRNLLWRYCHVE---LQKRRW--- 336
            + +YV    +F E +  GSS + V   +ED+ I + RN  W+    +   L + R+   
Sbjct: 293 NVAYYVAD--TFSEEYT-GSSLKTVERNVEDDYIANLRNNCWKEKQQKEGLLYRARYFGD 349

Query: 337 ------NKNLPTPHCNKLENL 351
                  + + TP CN+L  +
Sbjct: 350 TDMYHRAQKMGTPSCNRLSEV 370

Mus musculus (taxid: 10090)

>sp|Q7ZXQ8|DJB14_XENLA DnaJ homolog subfamily B member 14 OS=Xenopus laevis GN=dnajb14 PE=2 SV=1

 Score =  171 bits (434), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/339 (33%), Positives = 174/339 (51%), Gaps = 27/339 (7%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           M+ N+DEA RC+RI + AI +G K++A +F   A+RL  +     +L A EK     +GP
Sbjct: 1   MESNRDEAERCVRIGKAAIEAGDKEKARRFFSKAERLYPSSEARVLLDALEKNDTAGNGP 60

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCS 120
                  +++     +P  EK   G +G + +T++ V+ +++IK+ K YY +LGV     
Sbjct: 61  Q-----SEKMSKSTEQPKAEKDSSGDTG-KGHTQDQVDGVQRIKKCKTYYEVLGVSPDAG 114

Query: 121 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHN 180
            E+++KAYRKL+LK HPDKN APG+ EAFKK+  A+  LS+ + R+ YD  G  D  ++N
Sbjct: 115 EEDLKKAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYDLTGSEDNVQNN 174

Query: 181 QRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVY-----RTR--------- 226
            R+          H  F+ ++ P+++F  FFG    F +  V+     RTR         
Sbjct: 175 HRNGGFD-----YHRGFEADITPEDLFNMFFG--GGFPSGSVHTFSNGRTRYSHHQHHHH 227

Query: 227 GMRSQEREEFHGAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHG 286
               +E E   G    F+ L+ I+  +L+ LL+ L  S P YSL+      I R TE   
Sbjct: 228 SGHDREEERADGGFSMFIQLMPIIVLILVSLLSQLMVSNPPYSLYPRSGQTIKRVTENLQ 287

Query: 287 IEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWR 325
           I +YV      + N          IE++ + + RN  WR
Sbjct: 288 ISYYVSKDFKSEYNGMLLQKLEKNIEEDYVANVRNNCWR 326

May act as a co-chaperone.

Xenopus laevis (taxid: 8355)

>sp|Q9NXW2|DJB12_HUMAN DnaJ homolog subfamily B member 12 OS=Homo sapiens GN=DNAJB12 PE=1 SV=4

 Score =  170 bits (430), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/346 (36%), Positives = 181/346 (52%), Gaps = 36/346 (10%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEK--LGVGDS 58
           M+ NKDEA RCI IA +AI S +  RAL+F++ AQRL     V  ++ +  +     GD 
Sbjct: 1   MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVRALIESLNQKPQTAGDQ 60

Query: 59  GP--NVSSADEKRLD--DQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILG 114
            P  + + A  ++    D  S  G E  GE   G   YT E V  ++++K+ KDYY ILG
Sbjct: 61  PPPTDTTHATHRKAGGTDAPSANG-EAGGESTKG---YTAEQVAAVKRVKQCKDYYEILG 116

Query: 115 VERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLV 174
           V R  S E+++KAYR+L+LK HPDKN APG+ EAFK +  A+  LS+ + R+ YD  G  
Sbjct: 117 VSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG-- 174

Query: 175 DEFEHNQRHNVRPRRRRAQHDF---FDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMR-- 229
           D+     RH           DF   F+ ++ P+++F  FFG         VY    MR  
Sbjct: 175 DDKSQAARHG------HGHGDFHRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYT 228

Query: 230 ---SQEREEFHG-AGLN-FVFLLQILPFLLIFLLAYLPYSEPDYSLH--RNFNYQIPRTT 282
               Q+R +  G  GL  FV L+ IL  +L+  L+ L  S P YSL    +  +   R T
Sbjct: 229 YQQRQDRRDNQGDGGLGVFVQLMPILILILVSALSQLMVSSPPYSLSPRPSVGHIHRRVT 288

Query: 283 EKHGIEFYVKSPASFDENFPHGSSARAV---IEDNVIKDYRNLLWR 325
           +  G+ +YV    +F E +  GSS + V   +ED+ I + RN  W+
Sbjct: 289 DHLGVVYYVGD--TFSEEYT-GSSLKTVERNVEDDYIANLRNNCWK 331

Homo sapiens (taxid: 9606)

>sp|Q58DR2|DJB12_BOVIN DnaJ homolog subfamily B member 12 OS=Bos taurus GN=DNAJB12 PE=2 SV=1

 Score =  169 bits (427), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 174/342 (50%), Gaps = 28/342 (8%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAAC-EKLGVGDSG 59
           M+ NKDEA RCI IA +AI S +  RAL+F++ AQRL     VH ++ +  +K       
Sbjct: 1   MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVHALIESLNQKPQPAGDQ 60

Query: 60  PNVSSADEKRLDDQRSKPGLEKLGE-GLSGERSYTEEHVELIRQIKRNKDYYAILGVERS 118
           P  + A                 GE G    + YT E V  ++++K+ KDYY ILGV R 
Sbjct: 61  PQPTEATHTTHRKAAGANTASANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRG 120

Query: 119 CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 178
            S E+++KAYRKL+LK HPDKN APG+ EAFK +  A+  LS+ + R+ YD  G  D+  
Sbjct: 121 ASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG--DDKG 178

Query: 179 HNQRHNVRPRRRRAQHDF---FDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMR-----S 230
              RH           DF   F+ ++ P+++F  FFG         VY    MR      
Sbjct: 179 QAARHG------HGHGDFHRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYHQR 232

Query: 231 QEREEFHG-AGLN-FVFLLQILPFLLIFLLAYLPYSEPDYSLH--RNFNYQIPRTTEKHG 286
           Q+R E  G  GL  FV L+ IL  +L+  L+ L  S P YSL    +  +   R T+   
Sbjct: 233 QDRRENQGDGGLGVFVQLMPILILILVSALSQLMVSSPPYSLSLRPSVGHVHKRVTDHLN 292

Query: 287 IEFYVKSPASFDENFPHGSSARAV---IEDNVIKDYRNLLWR 325
           + +YV    +F + +  GSS + V   +ED+ I + RN  W+
Sbjct: 293 VVYYVAD--TFSQEYT-GSSLKMVERNVEDDYIANLRNNCWK 331

Bos taurus (taxid: 9913)

>sp|Q28I38|DJB14_XENTR DnaJ homolog subfamily B member 14 OS=Xenopus tropicalis GN=dnajb14 PE=2 SV=1

 Score =  161 bits (408), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 172/342 (50%), Gaps = 29/342 (8%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           M+ N+DEA RC+RIA+ AI +G K++A +F+  A+RL  +     +L A EK     +GP
Sbjct: 1   MESNRDEAERCVRIAKAAIEAGDKEKAKRFLSKAERLYPSSEARALLQAFEKNDTAGNGP 60

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGE---RSYTEEHVELIRQIKRNKDYYAILGVER 117
             +     ++     +P  EK     +     + +T++ ++ +++IK+ K YY +LGV  
Sbjct: 61  QSA-----KMAKGTEQPKAEKDSNASASSDTGKGHTQDQLDGVQRIKKCKTYYEVLGVST 115

Query: 118 SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF 177
               E+++KAYRKL+LK HPDKN APG+ EAFKK+  A+  LS+ + R+ YD  G  D+ 
Sbjct: 116 DAGEEDLKKAYRKLALKFHPDKNHAPGATEAFKKIGNAYAVLSNPEKRKQYDLTGSEDQM 175

Query: 178 EHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRS------- 230
           ++N R+          H  F+ ++ P+++F  FFG    F +  V+     R+       
Sbjct: 176 QNNHRNGGFD-----YHRGFEADITPEDLFNMFFG--GGFPSGSVHTFSNGRARYSHHQH 228

Query: 231 -------QEREEFHGAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTE 283
                  +E E   G    F+ L+ I+  +L+ LL+    S P YSL+        R TE
Sbjct: 229 HHHSGHDREDERADGGFSMFIQLMPIIVLILVSLLSQFMVSNPPYSLYPRSGQATKRVTE 288

Query: 284 KHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWR 325
              I +YV      + +          IE++ + + RN  WR
Sbjct: 289 NLQIAYYVSKDFQSEYSGILLQKLEKNIEEDYVANVRNNCWR 330

May act as a co-chaperone.

Xenopus tropicalis (taxid: 8364)

>sp|Q149L6|DJB14_MOUSE DnaJ homolog subfamily B member 14 OS=Mus musculus GN=Dnajb14 PE=2 SV=1

 Score =  152 bits (385), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/381 (31%), Positives = 191/381 (50%), Gaps = 39/381 (10%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           M+GN+DEA +C++IA EA+++G + +A +F++ A++L    +   +L    K G   +G 
Sbjct: 1   MEGNRDEAEKCVQIAREALSAGNRDKAQRFLQKAEKLYPLPAARALLEIIMKNG-STAGS 59

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGE--RSYTEEHVELIRQIKRNKDYYAILGVERS 118
           +          DQ SKP   K G   +GE  + YT++ VE +  I + K+YY +LGV + 
Sbjct: 60  STHCRKPPGSSDQ-SKPSCGKDGTSGAGEGGKVYTKDQVEGVLSINKCKNYYEVLGVTKD 118

Query: 119 CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 178
              E+++KAYRKL+LK HPDKN APG+ +AFKK+  A+  LS+ + R+ YD  G  +E  
Sbjct: 119 AGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQYDLTG-SEEQA 177

Query: 179 HNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRS-------- 230
            N ++N R    R      + ++ P+++F  FFG    F +  V+     R+        
Sbjct: 178 CNHQNNGRFNFHRG----CEADITPEDLFNIFFG--GGFPSGSVHSFSNGRAAYSHQHQH 231

Query: 231 ----QEREEFHGAGLNFVF--LLQILPFLLIFLLAYLPYSEPDYSLH-RNFNYQ-IPRTT 282
                EREE    G   VF  L+ I+  +L+ LL+ L  S P YSL+ R+ + Q I   T
Sbjct: 232 RHSGHEREEERADGGFSVFIQLMPIIVLILVSLLSQLMVSNPPYSLYPRSGSGQTIKMQT 291

Query: 283 EKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWR------------YCHVE 330
           E  G+ +YV      +            +E++ + + RN  W+              + +
Sbjct: 292 ENLGVVYYVSKDFKSEYKGTLLQKVEKSVEEDYVTNIRNNCWKERQQKTDMQYAAKVYRD 351

Query: 331 LQKRRWNKNLPTPHCNKLENL 351
            Q RR    L   +C +LE L
Sbjct: 352 EQLRRKADALSMENCKELERL 372

May act as a co-chaperone.

Mus musculus (taxid: 10090)

>sp|Q8TBM8|DJB14_HUMAN DnaJ homolog subfamily B member 14 OS=Homo sapiens GN=DNAJB14 PE=2 SV=1

 Score =  152 bits (383), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 173/343 (50%), Gaps = 27/343 (7%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           M+GN+DEA +C+ IA EA+ +G +++A +F++ A++L    S   +L    K   G +  
Sbjct: 1   MEGNRDEAEKCVEIAREALNAGNREKAQRFLQKAEKLYPLPSARALLEIIMK--NGSTAG 58

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGE--RSYTEEHVELIRQIKRNKDYYAILGVERS 118
           N     +      +SKP   K     SGE  + YT++ V+ +  I + K+YY +LGV + 
Sbjct: 59  NSPHCRKPSGSGDQSKPNCTKDSTSGSGEGGKGYTKDQVDGVLSINKCKNYYEVLGVTKD 118

Query: 119 CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 178
              E+++KAYRKL+LK HPDKN APG+ +AFKK+  A+  LS+ + R+ YD  G  +E  
Sbjct: 119 AGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQYDLTG-NEEQA 177

Query: 179 HNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRS-------- 230
            N ++N R    R      + ++ P+++F  FFG    F +  V+     R+        
Sbjct: 178 CNHQNNGRFNFHRG----CEADITPEDLFNIFFG--GGFPSGSVHSFSNGRAGYSQQHQH 231

Query: 231 ----QEREEFHGAGLNFVF--LLQILPFLLIFLLAYLPYSEPDYSLH--RNFNYQIPRTT 282
                EREE  G G   VF  L+ I+  +L+ LL+ L  S P YSL+        I   T
Sbjct: 232 RHSGHEREEERGDGGFSVFIQLMPIIVLILVSLLSQLMVSNPPYSLYPRSGTGQTIKMQT 291

Query: 283 EKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWR 325
           E  G+ +YV      +            +E++ + + RN  W+
Sbjct: 292 ENLGVVYYVNKDFKNEYKGMLLQKVEKSVEEDYVTNIRNNCWK 334

May act as a co-chaperone.

Homo sapiens (taxid: 9606)

>sp|Q5R6H3|DJB14_PONAB DnaJ homolog subfamily B member 14 OS=Pongo abelii GN=DNAJB14 PE=2 SV=1

 Score =  148 bits (373), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 172/343 (50%), Gaps = 27/343 (7%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           M+GN+DEA +C+ IA EA+ +G +++A +F++ A++L    S   +L    K   G +  
Sbjct: 1   MEGNRDEAEKCVEIAREALNAGNREKAQRFLQKAEKLYPLPSARALLEIIMK--NGSTAG 58

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGE--RSYTEEHVELIRQIKRNKDYYAILGVERS 118
           N     +      +SKP   K     SGE  + YT++ V+ +  I + K+ Y +LGV + 
Sbjct: 59  NSPHCRKPSGSGDQSKPNCTKDSTSGSGEGGKGYTKDQVDGVLSINKCKNCYEVLGVTKD 118

Query: 119 CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 178
              E+++KAYRKL+LK HPDKN APG+ +AFKK+  A+  LS+ + R+ YD  G  +E  
Sbjct: 119 AGDEDLKKAYRKLALKFHPDKNHAPGATDAFKKIGNAYAVLSNPEKRKQYDLTG-NEEQA 177

Query: 179 HNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRS-------- 230
            N ++N R    R      + ++ P+++F  FFG    F +  V+     R+        
Sbjct: 178 CNHQNNGRFNFHRG----CEADITPEDLFNIFFG--GGFPSGSVHSFSNGRAGYSQQHQH 231

Query: 231 ----QEREEFHGAGLNFVF--LLQILPFLLIFLLAYLPYSEPDYSLH--RNFNYQIPRTT 282
                EREE  G G   VF  L+ I+  +L+ LL+ L  S P YSL+        I   T
Sbjct: 232 RHSGHEREEERGDGGFSVFIQLMPIIVLILVSLLSQLMVSNPPYSLYPRSGTGQTIKMQT 291

Query: 283 EKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWR 325
           E  G+ +YV      +            +E++ + + RN  W+
Sbjct: 292 ENLGVVYYVNKDFKNEYKGMLLQKVEKSVEEDYVTNIRNNCWK 334

May act as a co-chaperone.

Pongo abelii (taxid: 9601)

>sp|O13633|YNF5_SCHPO Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi041 PE=1 SV=1

 Score =  148 bits (373), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 165/322 (51%), Gaps = 35/322 (10%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGV-GDSG 59
           M+ +++EALRCI +A + + +G+  +ALKF   + R++      + +   EK  + G   
Sbjct: 1   MESSREEALRCIGLARKYLNAGEYDKALKFANKSLRIHATTEGEDFVKQIEKQKLTGSPN 60

Query: 60  PNVSSADEKRLDDQRSKPGLEKLGEGLSGERS---YTEEHVELIRQIK-RNKDYYAILGV 115
           P  +   E + +    K  + + G   +GE+     +E+H+ + + IK +N  YY IL +
Sbjct: 61  PQATPKQENKSNFFSEKQSVRENGNSSAGEKKQKWTSEQHLLVQKIIKYKNHQYYEILDL 120

Query: 116 ERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 175
           +++C+  EI+K+Y+KL+L++HPDKN AP ++EAFK V KAF+ LSD + R HYD  G+  
Sbjct: 121 KKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYDRTGMDP 180

Query: 176 EFEHNQRHNVRPRRRRAQHDFF---DDELDPDEIFRSFFGQQ----------DMFRTTRV 222
           E   +   +           F       + P+++F SFFG Q                RV
Sbjct: 181 ESRASAASSSFSSNAGGHPGFSAYPQANMSPEDLFNSFFGDQFFSGPGTFFFGGGPGIRV 240

Query: 223 YRTRG-----MRSQEREEFHGAGLNFVFLLQILPFLLIFLLAYLP-YSEPD-------YS 269
           ++  G      R Q+ ++     +      Q+LP +++ L A+L  +S  D       YS
Sbjct: 241 HQFGGRPRNFARRQQAQDMPPKSI----FYQLLPLIVVILFAFLSNFSWSDSTSVNTRYS 296

Query: 270 LHRNFNYQIPRTTEKHGIEFYV 291
             +N+ Y +PRTT KH I +Y+
Sbjct: 297 FQQNYKYTVPRTTAKHNIPYYM 318

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	352
255551777	356	Chaperone protein dnaJ, putative [Ricinu	0.994	0.983	0.723	1e-132
449460955	348	PREDICTED: chaperone protein dnaJ 49-lik	0.974	0.985	0.637	1e-131
449522791	348	PREDICTED: LOW QUALITY PROTEIN: chaperon	0.974	0.985	0.634	1e-131
359477190	353	PREDICTED: chaperone protein dnaJ 49 [Vi	0.991	0.988	0.707	1e-123
224110434	354	predicted protein [Populus trichocarpa]	0.980	0.974	0.661	1e-116
356556090	361	PREDICTED: chaperone protein dnaJ 49-lik	0.980	0.955	0.595	1e-109
356529523	358	PREDICTED: chaperone protein dnaJ 49-lik	0.951	0.935	0.572	1e-108
217072054	363	unknown [Medicago truncatula] gi|3885210	0.982	0.953	0.598	1e-102
10176939	350	DNAJ-like protein [Arabidopsis thaliana]	0.968	0.974	0.600	1e-102
30695598	354	chaperone protein dnaJ 49 [Arabidopsis t	0.968	0.963	0.600	1e-102

>gi|255551777|ref|XP_002516934.1| Chaperone protein dnaJ, putative [Ricinus communis] gi|223544022|gb|EEF45548.1| Chaperone protein dnaJ, putative [Ricinus communis]

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 256/354 (72%), Positives = 303/354 (85%), Gaps = 4/354 (1%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           MDGNKDEALRCIRIAEEAIAS  K+RALKFI+IAQRLN +LSV+++L ACEKLG   S  
Sbjct: 1   MDGNKDEALRCIRIAEEAIASRNKERALKFIRIAQRLNHDLSVNDLLTACEKLGSSGSNS 60

Query: 61  NVSSADEKRL--DDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERS 118
           N  S DEK +   D ++KP   K+ EGL+GE++YTEEHVELIRQ+K NKDYY+ILGVE++
Sbjct: 61  NPPSLDEKCVLNGDAKNKPSHGKIDEGLNGEKNYTEEHVELIRQVKINKDYYSILGVEKT 120

Query: 119 CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 178
            SVE+IR+AYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDD+SRR YD  GLVDEFE
Sbjct: 121 SSVEDIRRAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDNSRRQYDQTGLVDEFE 180

Query: 179 HNQRHNVRPRRRRAQ-HDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQEREEFH 237
           +NQ++NVR  RRR   HDF+DD+ DP+EIFRSFFGQ DMFR   VYR+     Q+R EFH
Sbjct: 181 YNQQYNVRRTRRRRNVHDFYDDDFDPNEIFRSFFGQTDMFRAHHVYRSGATAGQQRGEFH 240

Query: 238 GAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASF 297
           G G + + LLQILPFLLIFLLAYLP+SEPDYSLH+N++YQIP+TTEKHG+EF+VKS ASF
Sbjct: 241 GGGPSLLLLLQILPFLLIFLLAYLPFSEPDYSLHKNYSYQIPKTTEKHGLEFFVKS-ASF 299

Query: 298 DENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLENL 351
           D+N+P GS+ARA IEDNVIKDYRN+LWR+CH+ELQ+R W+KN+PTPHC+KL NL
Sbjct: 300 DDNYPIGSTARANIEDNVIKDYRNVLWRHCHIELQRRHWSKNMPTPHCDKLHNL 353

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460955|ref|XP_004148209.1| PREDICTED: chaperone protein dnaJ 49-like [Cucumis sativus]

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 225/353 (63%), Positives = 282/353 (79%), Gaps = 10/353 (2%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           MDGNKDEALRCIRIAEE+IASG K+RAL+FIKIA+RLN ++ V E+LAACE++G G    
Sbjct: 1   MDGNKDEALRCIRIAEESIASGNKERALRFIKIARRLNQSVQVDELLAACEEIGSG---- 56

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCS 120
              S++EKR     S  G  K G+GL+GER+Y+ EHV+LIRQIK  KDYY ILGVE++ S
Sbjct: 57  ---SSEEKRAGKGESVSGSVKHGDGLNGERNYSMEHVQLIRQIKTTKDYYGILGVEKTSS 113

Query: 121 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHN 180
            EEI++AYRKLSLKVHPDKNKAPGSEEAFKK+ KAF CLSDD  RR YDH  LVD++E+N
Sbjct: 114 AEEIKRAYRKLSLKVHPDKNKAPGSEEAFKKLSKAFSCLSDDTLRRQYDHTPLVDQYEYN 173

Query: 181 QRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTR--VYRTRGMRSQEREEFHG 238
           Q+HNVR RRRR  HD F++  DPDEIFR+FFGQ +MF+T+R   YRT G  SQ+R E +G
Sbjct: 174 QQHNVRQRRRRNGHDLFEENFDPDEIFRAFFGQGNMFQTSRAYTYRTGGAGSQQRTESYG 233

Query: 239 AGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFD 298
            G NF+ +L +LPFLLI LLAY+P+ EP+Y+LH++ +Y IP  TEKHG+EF+VKS + FD
Sbjct: 234 GGPNFLIILLMLPFLLICLLAYMPFPEPEYALHKSLSYSIPMATEKHGVEFFVKS-SDFD 292

Query: 299 ENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLENL 351
           E +P GS  R  +E++V++DYRN++WRYCH+ELQ+R+WNKNLPTPHC KL  L
Sbjct: 293 ERYPLGSPGRVELENSVLRDYRNMVWRYCHIELQRRQWNKNLPTPHCEKLNTL 345

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449522791|ref|XP_004168409.1| PREDICTED: LOW QUALITY PROTEIN: chaperone protein dnaJ 49-like [Cucumis sativus]

 Score =  473 bits (1218), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 224/353 (63%), Positives = 281/353 (79%), Gaps = 10/353 (2%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           MDGNKDEALRCIRIAEE+IASG K+RAL+FIKIA+RLN ++ V E+LAACE++G G    
Sbjct: 1   MDGNKDEALRCIRIAEESIASGNKERALRFIKIARRLNQSVQVDELLAACEEIGSG---- 56

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCS 120
              S++EKR     S  G  K G+GL+GER+Y+ EHV+LIRQIK  KDYY ILGVE++ S
Sbjct: 57  ---SSEEKRAGKGESVSGSVKHGDGLNGERNYSMEHVQLIRQIKTTKDYYGILGVEKTSS 113

Query: 121 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHN 180
            EEI++AYRKLSLKVHPD NKAPGSEEAFKK+ KAF CLSDD  RR YDH  LVD++E+N
Sbjct: 114 AEEIKRAYRKLSLKVHPDXNKAPGSEEAFKKLSKAFSCLSDDTLRRQYDHTPLVDQYEYN 173

Query: 181 QRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTR--VYRTRGMRSQEREEFHG 238
           Q+HNVR RRRR  HD F++  DPDEIFR+FFGQ +MF+T+R   YRT G  SQ+R E +G
Sbjct: 174 QQHNVRQRRRRNGHDLFEENFDPDEIFRAFFGQGNMFQTSRAYTYRTGGAGSQQRTESYG 233

Query: 239 AGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFD 298
            G NF+ +L +LPFLLI LLAY+P+ EP+Y+LH++ +Y IP  TEKHG+EF+VKS + FD
Sbjct: 234 GGPNFLIILLMLPFLLICLLAYMPFPEPEYALHKSLSYSIPMATEKHGVEFFVKS-SDFD 292

Query: 299 ENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLENL 351
           E +P GS  R  +E++V++DYRN++WRYCH+ELQ+R+WNKNLPTPHC KL  L
Sbjct: 293 ERYPLGSPGRVELENSVLRDYRNMVWRYCHIELQRRQWNKNLPTPHCEKLNTL 345

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359477190|ref|XP_002268185.2| PREDICTED: chaperone protein dnaJ 49 [Vitis vinifera]

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/352 (70%), Positives = 291/352 (82%), Gaps = 3/352 (0%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           MD NKDEALRC+RIAEEAI SG KQRALKFI IAQRLN NLSV ++LAACE+L    + P
Sbjct: 1   MDSNKDEALRCVRIAEEAIVSGNKQRALKFIGIAQRLNHNLSVGDLLAACERLDEAAA-P 59

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCS 120
              + D   +D  R++    K+GE  +GE++YTEEHVELIR+I+RNKDYY ILGVE+SCS
Sbjct: 60  PPPAVDGHGVDQNRNESVRSKVGEVSNGEQNYTEEHVELIRKIRRNKDYYGILGVEKSCS 119

Query: 121 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHN 180
           VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLS+++SRR YD  GLV+EFE+N
Sbjct: 120 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSEEESRRQYDQTGLVEEFEYN 179

Query: 181 QRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQEREEFHGAG 240
           Q+HNVR RRRR  HDFFDD+ DPDEIFRSFFGQ +MFR   VYRTR M  Q+RE FHG G
Sbjct: 180 QQHNVRRRRRRTGHDFFDDDFDPDEIFRSFFGQTEMFRANYVYRTRDMGGQQRENFHGGG 239

Query: 241 LNFVF-LLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDE 299
            N +  LLQILPFLLIFLLAYLP+SEP+YSL RN+ YQ  +TTEKHG+EFYVKS A FDE
Sbjct: 240 PNIMMVLLQILPFLLIFLLAYLPFSEPEYSLQRNYTYQFSQTTEKHGVEFYVKS-AEFDE 298

Query: 300 NFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLENL 351
            +P GS  RA IE NVI+DY+++L RYCH+ELQ+R+WN+NLP PHC+KL+NL
Sbjct: 299 KYPLGSVDRAKIEGNVIRDYKHMLGRYCHIELQRRQWNRNLPIPHCDKLQNL 350

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110434|ref|XP_002315518.1| predicted protein [Populus trichocarpa] gi|222864558|gb|EEF01689.1| predicted protein [Populus trichocarpa]

 Score =  425 bits (1093), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 236/357 (66%), Positives = 284/357 (79%), Gaps = 12/357 (3%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           MDGNKDEA+RC+RIAEEAIASG KQRA KFIK+AQRLN NLSV+ +L+ACEKL   DS  
Sbjct: 1   MDGNKDEAIRCVRIAEEAIASGNKQRAFKFIKMAQRLNHNLSVNHLLSACEKL---DSSE 57

Query: 61  NVSSADEKRLDDQRSKPGLEKLG---EGLSGERSYTEEHVELIRQIKRNKDYYAILGVER 117
           N +S D+    D R+  G  K     EG+S ERS+TEEHV LIR I RNKDYY ILGV++
Sbjct: 58  NSASVDQSDPKD-RNTNGFVKSDDGDEGMSAERSFTEEHVHLIRHINRNKDYYGILGVDK 116

Query: 118 SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF 177
           SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKK+CKAFKCLSD DSR+ YD  GLVDEF
Sbjct: 117 SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKLCKAFKCLSDGDSRKQYDQTGLVDEF 176

Query: 178 EHNQRH---NVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQERE 234
           EHNQ++   NVR RR  A+  ++DDE DPDEIFR+FFGQ D+FR   VYR R     ++ 
Sbjct: 177 EHNQQYNNNNVRRRRTSARGSYYDDEFDPDEIFRAFFGQADVFRARHVYRNRET-DGQQR 235

Query: 235 EFHGAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSP 294
              G G N + LLQILPFLLI LLAYLP+SEP+YSL +N  YQIP +TEK+G+E++VKS 
Sbjct: 236 GEQGGGPNLIVLLQILPFLLIILLAYLPFSEPEYSLLKNVAYQIPMSTEKYGVEYFVKSS 295

Query: 295 ASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLENL 351
           A FD+NFP GS AR  IED+VIKDYRN+LWRYC++E+++R+W++N+PTP+C+KL +L
Sbjct: 296 A-FDKNFPPGSPARDSIEDSVIKDYRNMLWRYCNIEIRRRQWSRNMPTPNCDKLRDL 351

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356556090|ref|XP_003546360.1| PREDICTED: chaperone protein dnaJ 49-like [Glycine max]

 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 216/363 (59%), Positives = 269/363 (74%), Gaps = 18/363 (4%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           M+GNKDEALRC+RIAEEAIASG K RALKF++IAQRLN +L +  +L  C++    DS  
Sbjct: 1   MEGNKDEALRCVRIAEEAIASGNKDRALKFLRIAQRLNRDLPLQSLLEKCDRF---DS-- 55

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCS 120
           + ++A            G     EGL+GER+YTEE+V+LIR+IK   DYYAILG+E+SCS
Sbjct: 56  HSAAAAACGGSGASPANGHSPRREGLNGERNYTEENVQLIREIKGKSDYYAILGLEKSCS 115

Query: 121 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL-VDEFEH 179
           VEEIR+AYRKLSLKVHPDKNKAPGSE+AFKKV KAFKCLSDD SRR YD  G   D++E 
Sbjct: 116 VEEIRRAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRMYDQTGTGTDDYES 175

Query: 180 NQRHNV---RPRRRRAQHDFFDDELDPDEIFRSFFGQQDMF-RTTRVYRTRGMRS---QE 232
            + +     R RR     DFF DE DPDEIFR+FFG  D+F R   VYRTRGM +   Q 
Sbjct: 176 TEVNTFWRRRRRRTTTTRDFFGDEFDPDEIFRAFFGHSDVFGRNNNVYRTRGMGNPNHQH 235

Query: 233 REEFH-GAG---LNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIE 288
           R EF+ G+G    N + L+Q+LPFL+I LLAYLP+SEP+YSLH+++NYQIP+TTE+  ++
Sbjct: 236 RHEFNAGSGGRHHNVMLLIQLLPFLIIVLLAYLPFSEPEYSLHKHYNYQIPKTTERLEVQ 295

Query: 289 FYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKL 348
           F+VKS A FD N+P GS AR  IE++VIKDYR++L RYC VE+Q+R WN+NLP PHC+KL
Sbjct: 296 FFVKSTA-FDANYPLGSDAREAIEESVIKDYRSMLRRYCQVEMQRRSWNRNLPAPHCDKL 354

Query: 349 ENL 351
            N 
Sbjct: 355 HNF 357

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356529523|ref|XP_003533340.1| PREDICTED: chaperone protein dnaJ 49-like isoform 1 [Glycine max] gi|356529525|ref|XP_003533341.1| PREDICTED: chaperone protein dnaJ 49-like isoform 2 [Glycine max] gi|356529527|ref|XP_003533342.1| PREDICTED: chaperone protein dnaJ 49-like isoform 3 [Glycine max]

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 212/370 (57%), Positives = 263/370 (71%), Gaps = 35/370 (9%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKL------G 54
           M+GNKDEALRC+RIAEEAIAS  K RALKF+KIAQRLN +L +  +L  C +L       
Sbjct: 1   MEGNKDEALRCVRIAEEAIASRNKDRALKFLKIAQRLNRDLPLQSLLDKCNRLDSHTAST 60

Query: 55  VGDSGPNVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILG 114
            G SG ++++    R              EGL  ER+YT+ H  LIR+IK   DYYAILG
Sbjct: 61  AGGSGASLANGHSPRR-------------EGLDVERNYTDVH--LIREIKGKSDYYAILG 105

Query: 115 VERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL- 173
           +E+SCSVEEIRKAYRKLSLKVHPDKNKAPGSE+AFKKV KAFKCLSDD SRR YD  G  
Sbjct: 106 LEKSCSVEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGSRRMYDQTGTA 165

Query: 174 VDEFEHNQ--RHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMF-RTTRVYRTRGMRS 230
            D+FE  +      R RR     DFF+DE DPDEIFR+FFG  D+F R   VYRTRG   
Sbjct: 166 ADDFESTEVNTFRRRRRRTATTRDFFEDEFDPDEIFRAFFGHSDVFGRNNHVYRTRGGMG 225

Query: 231 ----QEREEFHGAGL-----NFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRT 281
               Q R EF+  G      N + L+Q+LPFL+I LLAYLP+SEP+YSLH++++YQIP+T
Sbjct: 226 NPNHQHRHEFNAGGSGGRHHNVMLLIQLLPFLIIVLLAYLPFSEPEYSLHKHYSYQIPKT 285

Query: 282 TEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLP 341
           T++HG++F+VKS A+FD N+P GS AR  +E++V+KDYR++L RYC VE+Q+R WN+NLP
Sbjct: 286 TDRHGVQFFVKS-AAFDVNYPPGSDAREAVEESVMKDYRSMLRRYCQVEMQRRSWNRNLP 344

Query: 342 TPHCNKLENL 351
            PHC+KL N 
Sbjct: 345 APHCDKLHNF 354

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|217072054|gb|ACJ84387.1| unknown [Medicago truncatula] gi|388521051|gb|AFK48587.1| unknown [Medicago truncatula]

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 218/364 (59%), Positives = 266/364 (73%), Gaps = 18/364 (4%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           M+GNKDEALRCI+IAEEAI+SG K RALKFIKIAQRLN +L +  + A CE L   DS  
Sbjct: 1   MEGNKDEALRCIQIAEEAISSGNKSRALKFIKIAQRLNHDLPLDSLFAKCEHL---DSQS 57

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCS 120
             SS+        +  PG     +GL+GE++YTEE+V+LIR+IK   DYY+ILG+E+SCS
Sbjct: 58  TTSSSGVG-ASPAKDGPGRINKNDGLNGEKNYTEENVKLIREIKGKSDYYSILGLEKSCS 116

Query: 121 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE-- 178
           VEEIRKAYRKLSLKVHPDKNKAPGSE+AFKKV KAFKCLSDD +RR YD  GLVDEF+  
Sbjct: 117 VEEIRKAYRKLSLKVHPDKNKAPGSEDAFKKVSKAFKCLSDDGTRRDYDQGGLVDEFDSG 176

Query: 179 HNQRHNVRPRRRR--AQHDFFDDELDPDEIFRSFFGQQDMF--RTTRVYRT-------RG 227
           + Q H+ R RRRR    HD F+DE DPDEIFR+FFGQ D+F  R   VYRT         
Sbjct: 177 YGQNHSFRRRRRRVATSHDIFEDEFDPDEIFRAFFGQSDVFGGRRNHVYRTHGGGGMGHH 236

Query: 228 MRSQEREEFHGAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGI 287
              Q  E   G G + + L+Q+LP L+I LLAYLP+SEP+YSLH+N +YQI + TE +G+
Sbjct: 237 HHHQRPEVQGGGGHHLMLLIQLLPLLIIVLLAYLPFSEPEYSLHKNQSYQIRKVTEDYGV 296

Query: 288 EFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNK 347
           EF+VKS A  D N+P GS AR  IED VIKDYRN+L RYC +E+Q+R WN++LP PHC+K
Sbjct: 297 EFFVKSQA-LDVNYPIGSLARETIEDTVIKDYRNMLRRYCQLEIQRRTWNRHLPIPHCDK 355

Query: 348 LENL 351
           L+N 
Sbjct: 356 LKNF 359

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|10176939|dbj|BAB10088.1| DNAJ-like protein [Arabidopsis thaliana]

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/353 (60%), Positives = 269/353 (76%), Gaps = 12/353 (3%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           MDGNKD+A RC+RIAE+AI SG K+RALKFI +A+RLN +LSV E++AAC+ L   DS  
Sbjct: 1   MDGNKDDASRCLRIAEDAIVSGDKERALKFINMAKRLNPSLSVDELVAACDNL---DSVS 57

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCS 120
             SS  EK          LE      +G+  YTEE+V+L+R I RN DYYAILG+E++CS
Sbjct: 58  RNSSVSEKLKTMDGDDDKLE------TGKMKYTEENVDLVRNIIRNNDYYAILGLEKNCS 111

Query: 121 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHN 180
           V+EIRKAYRKLSLKVHPDKNKAPGSEEAFKKV KAF CLSD +SRR +D VG+VDEF+H 
Sbjct: 112 VDEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFDQVGIVDEFDHV 171

Query: 181 Q-RHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQ-DMFRTTRVYRTRGMRSQER-EEFH 237
           Q R+    RR   ++DFFDDE DP+EIFR+ FGQQ ++FR +  YRTR  R+Q R EE +
Sbjct: 172 QRRNRRPRRRYNTRNDFFDDEFDPEEIFRTVFGQQREVFRASHAYRTRQPRNQFREEEIN 231

Query: 238 GAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASF 297
            AG + + ++QILPF L+ LLAYLP+SEPDYSLH+N +YQIP+TT+   I FYV+S ++F
Sbjct: 232 VAGPSCLTIIQILPFFLLLLLAYLPFSEPDYSLHKNQSYQIPKTTQNTEISFYVRSASAF 291

Query: 298 DENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLEN 350
           DE FP  SSARA +E NVIK+Y++ L++ C +ELQKRRWNK +PTPHC +L++
Sbjct: 292 DEKFPLSSSARANLEGNVIKEYKHFLFQSCRIELQKRRWNKKIPTPHCIELQD 344

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30695598|ref|NP_199717.2| chaperone protein dnaJ 49 [Arabidopsis thaliana] gi|67462414|sp|Q9FH28.2|DNJ49_ARATH RecName: Full=Chaperone protein dnaJ 49; Short=AtDjC49; Short=AtJ49 gi|332008384|gb|AED95767.1| chaperone protein dnaJ 49 [Arabidopsis thaliana]

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 212/353 (60%), Positives = 269/353 (76%), Gaps = 12/353 (3%)

Query: 1   MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
           MDGNKD+A RC+RIAE+AI SG K+RALKFI +A+RLN +LSV E++AAC+ L   DS  
Sbjct: 1   MDGNKDDASRCLRIAEDAIVSGDKERALKFINMAKRLNPSLSVDELVAACDNL---DSVS 57

Query: 61  NVSSADEKRLDDQRSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCS 120
             SS  EK          LE      +G+  YTEE+V+L+R I RN DYYAILG+E++CS
Sbjct: 58  RNSSVSEKLKTMDGDDDKLE------TGKMKYTEENVDLVRNIIRNNDYYAILGLEKNCS 111

Query: 121 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHN 180
           V+EIRKAYRKLSLKVHPDKNKAPGSEEAFKKV KAF CLSD +SRR +D VG+VDEF+H 
Sbjct: 112 VDEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFDQVGIVDEFDHV 171

Query: 181 Q-RHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQ-DMFRTTRVYRTRGMRSQER-EEFH 237
           Q R+    RR   ++DFFDDE DP+EIFR+ FGQQ ++FR +  YRTR  R+Q R EE +
Sbjct: 172 QRRNRRPRRRYNTRNDFFDDEFDPEEIFRTVFGQQREVFRASHAYRTRQPRNQFREEEIN 231

Query: 238 GAGLNFVFLLQILPFLLIFLLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASF 297
            AG + + ++QILPF L+ LLAYLP+SEPDYSLH+N +YQIP+TT+   I FYV+S ++F
Sbjct: 232 VAGPSCLTIIQILPFFLLLLLAYLPFSEPDYSLHKNQSYQIPKTTQNTEISFYVRSASAF 291

Query: 298 DENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLEN 350
           DE FP  SSARA +E NVIK+Y++ L++ C +ELQKRRWNK +PTPHC +L++
Sbjct: 292 DEKFPLSSSARANLEGNVIKEYKHFLFQSCRIELQKRRWNKKIPTPHCIELQD 344

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	352
TAIR|locus:2155184	354	AT5G49060 [Arabidopsis thalian	0.968	0.963	0.558	3.7e-96
TAIR|locus:2082538	367	AT3G57340 [Arabidopsis thalian	0.985	0.945	0.372	1.6e-61
TAIR|locus:2166404	294	AT5G05750 [Arabidopsis thalian	0.630	0.755	0.445	6.9e-47
MGI|MGI:1931881	376	Dnajb12 "DnaJ (Hsp40) homolog,	0.900	0.843	0.332	2.1e-38
UNIPROTKB|Q58DR2	370	DNAJB12 "DnaJ homolog subfamil	0.900	0.856	0.327	1.1e-37
UNIPROTKB|Q9NXW2	375	DNAJB12 "DnaJ homolog subfamil	0.900	0.845	0.327	1.5e-37
ZFIN|ZDB-GENE-070410-128	369	dnajb12b "DnaJ (Hsp40) homolog	0.892	0.850	0.315	8.3e-35
POMBASE|SPBC17A3.05c	403	SPBC17A3.05c "DNAJ/DUF1977 DNA	0.687	0.600	0.298	4.4e-34
ZFIN|ZDB-GENE-061110-138	380	zgc:153638 "zgc:153638" [Danio	0.894	0.828	0.301	9.5e-34
WB|WBGene00001019	401	dnj-1 [Caenorhabditis elegans	0.656	0.576	0.325	2.6e-32

TAIR|locus:2155184 AT5G49060 [Arabidopsis thaliana (taxid:3702)]

 Score = 956 (341.6 bits), Expect = 3.7e-96, P = 3.7e-96
 Identities = 197/353 (55%), Positives = 247/353 (69%)

Query:     1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGP 60
             MDGNKD+A RC+RIAE+AI SG K+RALKFI +A+RLN +LSV E++AAC+ L   DS  
Sbjct:     1 MDGNKDDASRCLRIAEDAIVSGDKERALKFINMAKRLNPSLSVDELVAACDNL---DSVS 57

Query:    61 NVSSADEKRLDDQRSKPXXXXXXXXXXXXRSYTEEHVELIRQIKRNKDYYAILGVERSCS 120
               SS  EK       K               YTEE+V+L+R I RN DYYAILG+E++CS
Sbjct:    58 RNSSVSEKL------KTMDGDDDKLETGKMKYTEENVDLVRNIIRNNDYYAILGLEKNCS 111

Query:   121 VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHN 180
             V+EIRKAYRKLSLKVHPDKNKAPGSEEAFKKV KAF CLSD +SRR +D VG+VDEF+H 
Sbjct:   112 VDEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFTCLSDGNSRRQFDQVGIVDEFDHV 171

Query:   181 QRHNVX-XXXXXAQHDFFDDELDPDEIFRSFFGQQ-DMFRTTRVYRTRGMRSQEREE-FH 237
             QR N         ++DFFDDE DP+EIFR+ FGQQ ++FR +  YRTR  R+Q REE  +
Sbjct:   172 QRRNRRPRRRYNTRNDFFDDEFDPEEIFRTVFGQQREVFRASHAYRTRQPRNQFREEEIN 231

Query:   238 GAGLNFVFXXXXXXXXXXXXXXXXXXSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASF 297
              AG + +                   SEPDYSLH+N +YQIP+TT+   I FYV+S ++F
Sbjct:   232 VAGPSCLTIIQILPFFLLLLLAYLPFSEPDYSLHKNQSYQIPKTTQNTEISFYVRSASAF 291

Query:   298 DENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPHCNKLEN 350
             DE FP  SSARA +E NVIK+Y++ L++ C +ELQKRRWNK +PTPHC +L++
Sbjct:   292 DEKFPLSSSARANLEGNVIKEYKHFLFQSCRIELQKRRWNKKIPTPHCIELQD 344

GO:0005634 "nucleus" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2082538 AT3G57340 [Arabidopsis thaliana (taxid:3702)]

 Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
 Identities = 137/368 (37%), Positives = 208/368 (56%)

Query:     1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAAC-----EKLGV 55
             MDGNKD+AL+C++I + A+ +G + RALKF+  A+RL+ NL + ++++       ++ G 
Sbjct:     1 MDGNKDDALKCLKICKSAMEAGDRPRALKFLAKARRLDPNLPIDDLVSELNNNKSDEPGS 60

Query:    56 GDSGPNVSSADEKRLDDQRSKPXXXXXXXXXXXXRSYTEEHVELIRQIKRNKDYYAILGV 115
               S  + ++ D     D+ S               SYTEE + ++R+IK  KDYY ILG+
Sbjct:    61 AKSPGSAAAKDSSNSSDRPSLRQRGSSTTSSSSSMSYTEEQISIVRKIKSKKDYYEILGL 120

Query:   116 ERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 175
             E +CSV+++RKAYRKLSLKVHPDKN+APGSEEAFK V KAF+CLS+D++R+ YD  G  D
Sbjct:   121 ESNCSVDDVRKAYRKLSLKVHPDKNQAPGSEEAFKSVSKAFQCLSNDEARKKYDVSGS-D 179

Query:   176 EFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG-----------QQDMFRTTRVYR 224
             E  +  R +         + +++DE DP+EIFRSFFG               FR+     
Sbjct:   180 EPIYQPRRSARSNGFNGGY-YYEDEFDPNEIFRSFFGGGGFGGGGMPPATAQFRSFNFGA 238

Query:   225 TRGMRSQEREEFHGAGLNFVFXXXXXXXXXXXXXXXXXXSEPDYSLHRNFNYQIPRTTEK 284
             TR  R+    +   AG N                     S+P Y L   + YQ   TT+K
Sbjct:   239 TR-QRTANNNQAPDAGFNARILLQLLPVVFILLLNFMPSSQPVYQLSATYPYQYKFTTQK 297

Query:   285 HGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKRRWNKNLPTPH 344
              G+ ++VKS + F++++P  S+ R  +E+ V +DY ++L + C  E+Q+++W     TPH
Sbjct:   298 -GVNYFVKS-SKFEQDYPRDSNDRHTLEEQVERDYVSILSQNCRYEMQRKQWGFVRETPH 355

Query:   345 CNKLENLD 352
             C+ +   D
Sbjct:   356 CDMMRRFD 363

GO:0005634 "nucleus" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2166404 AT5G05750 [Arabidopsis thaliana (taxid:3702)]

 Score = 491 (177.9 bits), Expect = 6.9e-47, P = 6.9e-47
 Identities = 103/231 (44%), Positives = 147/231 (63%)

Query:     1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLG----VG 56
             MDGNKD+AL+C++I ++AI +G + RALKF++ A+RL+ NL +  +++  +K        
Sbjct:     1 MDGNKDDALKCLKIGKDAIEAGDRSRALKFLEKARRLDPNLPIDGLVSDLKKQSDEPAAE 60

Query:    57 DSGPNVSSADEKRLDDQRS--KPXXXXXXXXXXXXRSYTEEHVELIRQIKRNKDYYAILG 114
             +  P  ++ +  +  D+ S  +              S TEE   ++R+IK  KDYY ILG
Sbjct:    61 EDSPGSAANESSKPSDRPSLRQRGSSSSAAGSSSSSSSTEEQRTIVREIKSKKDYYEILG 120

Query:   115 VERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLV 174
             ++ +CSVE++RK+YRKLSLKVHPDKNKAPGSEEAFK V KAF+CLS++D+RR YD  G  
Sbjct:   121 LKSNCSVEDLRKSYRKLSLKVHPDKNKAPGSEEAFKSVSKAFQCLSNEDTRRKYDGSGS- 179

Query:   175 DEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRT 225
             DE  +  R +         + F+DDE D DEIFRSFFG  +M   T  +R+
Sbjct:   180 DEPAYQPRRDARRNNGF--NGFYDDEFDADEIFRSFFGGGEMNPATTQFRS 228

GO:0005634 "nucleus" evidence=ISM

GO:0006457 "protein folding" evidence=IEA;ISS

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

MGI|MGI:1931881 Dnajb12 "DnaJ (Hsp40) homolog, subfamily B, member 12" [Mus musculus (taxid:10090)]

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 113/340 (33%), Positives = 164/340 (48%)

Query:     1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKL--GVGDS 58
             M+ NKDEA RCI IA +AI S + +RAL+F++ AQRL     V  ++ +  +     GD 
Sbjct:     1 MESNKDEAERCISIALKAIQSNQPERALRFLEKAQRLYPTPRVSALIESLNQKPQSTGDH 60

Query:    59 G-PNVSSADEKRLDDQRSKPXXXXXXXXXXXXRSYTEEHVELIRQIKRNKDYYAILGVER 117
               P  ++    +       P            + YT E V  ++++K+ KDYY ILGV R
Sbjct:    61 PQPTDTTHTTTKKAGGTETPSANGEAGGGESAKGYTSEQVAAVKRVKQCKDYYEILGVSR 120

Query:   118 SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF 177
             S S E+++KAYRKL+LK HPDKN APG+ EAFK +  A+  LS+ + R+ YD  G  D+ 
Sbjct:   121 SASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG--DDK 178

Query:   178 EHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMR-----SQE 232
                 RH          H  F+ ++ P+++F  FFG         VY    MR      Q+
Sbjct:   179 SQAARHGHSHGDF---HRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYQQRQD 235

Query:   233 REEFHG-AGLN-FVFXXXXXXXXXXXXXXXXXXSEPDYSL--HRNFNYQIPRTTEKHGIE 288
             R +  G  GL  FV                   S P YSL    +  +   R T+   + 
Sbjct:   236 RRDNQGDGGLGVFVQLMPILILILVSALSQLMVSSPPYSLSPRPSVGHIHKRVTDHLNVA 295

Query:   289 FYVKSPASFDENFPHGSSARAV---IEDNVIKDYRNLLWR 325
             +YV    +F E +  GSS + V   +ED+ I + RN  W+
Sbjct:   296 YYVAD--TFSEEYT-GSSLKTVERNVEDDYIANLRNNCWK 332

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q58DR2 DNAJB12 "DnaJ homolog subfamily B member 12" [Bos taurus (taxid:9913)]

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 111/339 (32%), Positives = 160/339 (47%)

Query:     1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLG--VGDS 58
             M+ NKDEA RCI IA +AI S +  RAL+F++ AQRL     VH ++ +  +     GD 
Sbjct:     1 MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVHALIESLNQKPQPAGDQ 60

Query:    59 GPNVSSADEKRLDDQRSKPXXXXXXXXXXXXRSYTEEHVELIRQIKRNKDYYAILGVERS 118
                  +          +              + YT E V  ++++K+ KDYY ILGV R 
Sbjct:    61 PQPTEATHTTHRKAAGANTASANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRG 120

Query:   119 CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 178
              S E+++KAYRKL+LK HPDKN APG+ EAFK +  A+  LS+ + R+ YD  G  D+  
Sbjct:   121 ASDEDLKKAYRKLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG--DDKG 178

Query:   179 HNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMR-----SQER 233
                RH          H  F+ ++ P+++F  FFG         VY    MR      Q+R
Sbjct:   179 QAARHGHGHGDF---HRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYHQRQDR 235

Query:   234 EEFHG-AGLN-FVFXXXXXXXXXXXXXXXXXXSEPDYSL--HRNFNYQIPRTTEKHGIEF 289
              E  G  GL  FV                   S P YSL    +  +   R T+   + +
Sbjct:   236 RENQGDGGLGVFVQLMPILILILVSALSQLMVSSPPYSLSLRPSVGHVHKRVTDHLNVVY 295

Query:   290 YVKSPASFDENFPHGSSARAV---IEDNVIKDYRNLLWR 325
             YV    +F + +  GSS + V   +ED+ I + RN  W+
Sbjct:   296 YVAD--TFSQEYT-GSSLKMVERNVEDDYIANLRNNCWK 331

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|Q9NXW2 DNAJB12 "DnaJ homolog subfamily B member 12" [Homo sapiens (taxid:9606)]

 Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
 Identities = 111/339 (32%), Positives = 161/339 (47%)

Query:     1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLG--VGDS 58
             M+ NKDEA RCI IA +AI S +  RAL+F++ AQRL     V  ++ +  +     GD 
Sbjct:     1 MESNKDEAERCISIALKAIQSNQPDRALRFLEKAQRLYPTPRVRALIESLNQKPQTAGDQ 60

Query:    59 GPNVSSADEKRLDDQRSKPXXXXXXXXXXXXRSYTEEHVELIRQIKRNKDYYAILGVERS 118
              P   +          +              + YT E V  ++++K+ KDYY ILGV R 
Sbjct:    61 PPPTDTTHATHRKAGGTDAPSANGEAGGESTKGYTAEQVAAVKRVKQCKDYYEILGVSRG 120

Query:   119 CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE 178
              S E+++KAYR+L+LK HPDKN APG+ EAFK +  A+  LS+ + R+ YD  G  D+  
Sbjct:   121 ASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFG--DDKS 178

Query:   179 HNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMR-----SQER 233
                RH          H  F+ ++ P+++F  FFG         VY    MR      Q+R
Sbjct:   179 QAARHGHGHGDF---HRGFEADISPEDLFNMFFGGGFPSSNVHVYSNGRMRYTYQQRQDR 235

Query:   234 EEFHG-AGLN-FVFXXXXXXXXXXXXXXXXXXSEPDYSL--HRNFNYQIPRTTEKHGIEF 289
              +  G  GL  FV                   S P YSL    +  +   R T+  G+ +
Sbjct:   236 RDNQGDGGLGVFVQLMPILILILVSALSQLMVSSPPYSLSPRPSVGHIHRRVTDHLGVVY 295

Query:   290 YVKSPASFDENFPHGSSARAV---IEDNVIKDYRNLLWR 325
             YV    +F E +  GSS + V   +ED+ I + RN  W+
Sbjct:   296 YVGD--TFSEEYT-GSSLKTVERNVEDDYIANLRNNCWK 331

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-070410-128 dnajb12b "DnaJ (Hsp40) homolog, subfamily B, member 12b" [Danio rerio (taxid:7955)]

 Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
 Identities = 106/336 (31%), Positives = 161/336 (47%)

Query:     1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGD-SG 59
             M+ N+DEA RCI IA EA+   + ++A +F++ AQRL       ++L + E+ G    S 
Sbjct:     1 MEVNRDEAERCIDIAVEALEDSQHEKARRFLEKAQRLFPTHRARDLLESLERNGNPSWSQ 60

Query:    60 PNVSSADEKRLDDQRSKPXXXXXXXXXXXXRSYTEEHVELIRQIKRNKDYYAILGVERSC 119
              +   A E     QR               + YT E  + +R+IK+ K+YY ILGV++  
Sbjct:    61 SSAGGATEGTETHQRRSGVSSNGEKPAESSKPYTPEQADAVRRIKQCKNYYEILGVQKDA 120

Query:   120 SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEH 179
             S ++++KAYRKL+LK HPDKN APG+ EAFK +  A+  LS+ + RR YD  G  +    
Sbjct:   121 SEDDLKKAYRKLALKFHPDKNHAPGATEAFKAIGNAYAVLSNGEKRRQYDQFG-EERSSG 179

Query:   180 NQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMR-SQ---EREE 235
               R N        Q   F+ ++ P+++F  FFG         +Y    MR +Q   ER E
Sbjct:   180 GGRSN----HTNTQ---FEADISPEDLFNMFFGGGFPSSNVHMYSNGRMRFNQHQGERGE 232

Query:   236 FHGAGLNFVFXXX-XXXXXXXXXXXXXXXSEPDYSLHR--NFNYQIPRTTEKHGIEFYVK 292
               G GL  +                    + P YSL    +  +   R T+  G+ ++V 
Sbjct:   233 HRGGGLALLMQLMPILILVIVSALSQMMVTNPPYSLSYKPSAGHTHKRVTQGLGVAYFVT 292

Query:   293 SPASFDENFPHGSSARAV---IEDNVIKDYRNLLWR 325
                 F + F  G S + V   +ED+ I + RN  W+
Sbjct:   293 E--RFSQEFS-GVSLQQVERSVEDDYISNLRNNCWK 325

GO:0005575 "cellular_component" evidence=ND

POMBASE|SPBC17A3.05c SPBC17A3.05c "DNAJ/DUF1977 DNAJB12 homolog (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 308 (113.5 bits), Expect = 4.4e-34, Sum P(2) = 4.4e-34
 Identities = 75/251 (29%), Positives = 127/251 (50%)

Query:     1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGV-GDSG 59
             M+ +++EALRCI +A + + +G+  +ALKF   + R++      + +   EK  + G   
Sbjct:     1 MESSREEALRCIGLARKYLNAGEYDKALKFANKSLRIHATTEGEDFVKQIEKQKLTGSPN 60

Query:    60 PNVSSADEKRLD--DQRSKPXXXXXXXXXXXXRSYT-EEHVELIRQIK-RNKDYYAILGV 115
             P  +   E + +   ++               + +T E+H+ + + IK +N  YY IL +
Sbjct:    61 PQATPKQENKSNFFSEKQSVRENGNSSAGEKKQKWTSEQHLLVQKIIKYKNHQYYEILDL 120

Query:   116 ERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVD 175
             +++C+  EI+K+Y+KL+L++HPDKN AP ++EAFK V KAF+ LSD + R HYD  G+  
Sbjct:   121 KKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVLSDPNLRAHYDRTGMDP 180

Query:   176 EFEHNQRHNVXXXXXXAQHDFF---DDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQE 232
             E   +   +           F       + P+++F SFFG Q  F     +   G     
Sbjct:   181 ESRASAASSSFSSNAGGHPGFSAYPQANMSPEDLFNSFFGDQ-FFSGPGTFFFGGGPGIR 239

Query:   233 REEFHGAGLNF 243
               +F G   NF
Sbjct:   240 VHQFGGRPRNF 250

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

GO:0006457 "protein folding" evidence=NAS

GO:0016021 "integral to membrane" evidence=IEA

GO:0030544 "Hsp70 protein binding" evidence=ISM

ZFIN|ZDB-GENE-061110-138 zgc:153638 "zgc:153638" [Danio rerio (taxid:7955)]

 Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
 Identities = 104/345 (30%), Positives = 162/345 (46%)

Query:     1 MDGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLG--VGDS 58
             M+GN+DEA +C+ IA +AI  G K +ALKF+  A++L        +L A    G   G+S
Sbjct:     1 MEGNRDEAKKCLNIAVKAIEDGNKNKALKFLYKAEKLYPTEKAKVLLEALLNNGNSTGNS 60

Query:    59 GPNVS-SADEKRLDDQRSKPXXXXXXXXXXXXRSYTEEHVELIRQIKRNKDYYAILGVER 117
                   S++  +   Q                + +T+E  E +++IK+ K+YY +LG+ +
Sbjct:    61 TAYCGKSSNGSKPGSQTQHEAPKQDSAAADLTKGFTKEQAEGVQRIKKCKNYYEVLGIRK 120

Query:   118 SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF 177
               S +E++KAYR+L+LK HPDKN APG+ +AFKK+  A+  LS+ + +R YD  G     
Sbjct:   121 DASDDELKKAYRQLALKFHPDKNHAPGATDAFKKIGNAYSVLSNPEKKRQYDLSG----G 176

Query:   178 EHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFG------QQDMFRTTRVY-----RTR 226
             E     N         H  F+ ++ P+++F  FFG          F   R Y      TR
Sbjct:   177 EEPSTPNYSSHEGFDFHRGFESDITPEDLFNMFFGGSFPSSNSHEFTNGRTYSHHTEETR 236

Query:   227 GMRSQEREEFHGAGLNFVFXXXXXXXXXXXXXXXXXXSEPDYSLHR--NFNYQIPRTTEK 284
             G R +ER +  G    F+                   S P YSL+   +    + R TE 
Sbjct:   237 GERVEERGD--GGFSMFIQLMPIVVLVLVSILSQLLVSTPPYSLYSRPSTGQTVKRQTEN 294

Query:   285 HGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDY----RNLLWR 325
               ++++V +    D    +  SA   IE +V +DY    RN  W+
Sbjct:   295 LHVDYFVTT----DFKSEYKGSALLKIEKSVEEDYVSNVRNNCWK 335

GO:0005575 "cellular_component" evidence=ND

WB|WBGene00001019 dnj-1 [Caenorhabditis elegans (taxid:6239)]

 Score = 292 (107.8 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
 Identities = 81/249 (32%), Positives = 118/249 (47%)

Query:    92 YTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKK 151
             YT E  EL+ +I+  KDYY IL +++  S ++IRK YRKL+LK+HPDK +AP + EAFK 
Sbjct:   121 YTSEQKELVERIRHCKDYYEILKIDKKASDDDIRKEYRKLALKLHPDKCRAPHATEAFKA 180

Query:   152 VCKAFKCLSDDDSRRHYDHVGLVDEFEHNQ--RHNVXXXXXXAQHDF---FDDELDPDEI 206
             +  A+  LSD D RR YD  G      H    R          +HD+   F+ E  P+EI
Sbjct:   181 LGNAYAVLSDTDKRRQYDQYGAEAANSHTPTTRRRGGGHGAFFEHDYAHGFEAEFTPEEI 240

Query:   207 FRSFFGQQDMFRTTRVYRTRGMRSQEREEFHGAGLNFVFXXXXX-----XXXXXXXXXXX 261
             F  FFG    F T +V R R   +Q+++  H       +                     
Sbjct:   241 FNMFFGGG--FPTEQV-RRRARYAQQQQYHHYEQQQSPYGPLLQLLPLIAIMVIGLLAQL 297

Query:   262 XXSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRN 321
                EP YSLH+   + I R T    + ++V++   F+ ++  G   +  +E  V  DY  
Sbjct:   298 MVGEPAYSLHQTSKFTIKRLTADLRVPYFVRT--DFETSY-RGRIRQ--VEQQVEDDYIQ 352

Query:   322 LLWRYCHVE 330
              L   C+ E
Sbjct:   353 NLRMNCYKE 361

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0006457 "protein folding" evidence=IEA

GO:0051082 "unfolded protein binding" evidence=IEA

GO:0040011 "locomotion" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q58DR2	DJB12_BOVIN	No assigned EC number	0.3567	0.8920	0.8486	yes	no
Q9QYI4	DJB12_MOUSE	No assigned EC number	0.3359	0.9659	0.9042	yes	no
Q9FH28	DNJ49_ARATH	No assigned EC number	0.6005	0.9687	0.9632	yes	no
Q9NXW2	DJB12_HUMAN	No assigned EC number	0.3641	0.8806	0.8266	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00033001001	SubName- Full=Chromosome chr5 scaffold_64, whole genome shotgun sequence; (352 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00024351001	SubName- Full=Putative uncharacterized protein (Chromosome chr6 scaffold_3, whole genome shotgu [...] (648 aa)			•			•			0.882
	GSVIVG00021301001	SubName- Full=Chromosome chr8 scaffold_23, whole genome shotgun sequence; (649 aa)			•			•			0.882
	GSVIVG00024357001	SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (652 aa)			•			•			0.882
	GSVIVG00033448001	RecName- Full=Ubiquitin carrier protein; EC=6.3.2.-; (148 aa)						•			0.800
	GSVIVG00012527001	SubName- Full=Putative uncharacterized protein (Chromosome undetermined scaffold_390, whole gen [...] (276 aa)						•			0.800
	GSVIVG00006484001	RecName- Full=Ubiquitin carrier protein; EC=6.3.2.-; (148 aa)						•			0.800
	GSVIVG00031635001	SubName- Full=Putative uncharacterized protein (Chromosome chr5 scaffold_58, whole genome shotg [...] (216 aa)			•						0.478
	GSVIVG00017724001	SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (538 aa)			•						0.471
	GSVIVG00022013001	SubName- Full=Chromosome chr18 scaffold_24, whole genome shotgun sequence; (667 aa)			•						0.468
	GSVIVG00017185001	SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (482 aa)			•						0.463

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	352
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	1e-25
pfam00226	63	pfam00226, DnaJ, DnaJ domain	6e-25
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	8e-23
PRK14298	377	PRK14298, PRK14298, chaperone protein DnaJ; Provis	2e-21
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	4e-21
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	7e-21
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	1e-20
PRK14276	380	PRK14276, PRK14276, chaperone protein DnaJ; Provis	1e-20
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	2e-20
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	4e-20
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	5e-20
PRK14293	374	PRK14293, PRK14293, chaperone protein DnaJ; Provis	1e-19
PRK14281	397	PRK14281, PRK14281, chaperone protein DnaJ; Provis	2e-19
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	3e-19
PRK10266	306	PRK10266, PRK10266, curved DNA-binding protein Cbp	5e-19
PRK14283	378	PRK14283, PRK14283, chaperone protein DnaJ; Provis	2e-18
PRK14294	366	PRK14294, PRK14294, chaperone protein DnaJ; Provis	5e-18
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	5e-18
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	1e-17
PRK14278	378	PRK14278, PRK14278, chaperone protein DnaJ; Provis	6e-17
PRK14297	380	PRK14297, PRK14297, chaperone protein DnaJ; Provis	6e-17
pfam09320	107	pfam09320, DUF1977, Domain of unknown function (DU	7e-17
PRK14279	392	PRK14279, PRK14279, chaperone protein DnaJ; Provis	9e-17
PRK14284	391	PRK14284, PRK14284, chaperone protein DnaJ; Provis	2e-16
PRK14295	389	PRK14295, PRK14295, chaperone protein DnaJ; Provis	2e-16
PRK14290	365	PRK14290, PRK14290, chaperone protein DnaJ; Provis	2e-16
PRK14289	386	PRK14289, PRK14289, chaperone protein DnaJ; Provis	2e-16
PRK14285	365	PRK14285, PRK14285, chaperone protein DnaJ; Provis	2e-16
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	1e-15
PRK14277	386	PRK14277, PRK14277, chaperone protein DnaJ; Provis	1e-15
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	7e-15
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	1e-14
PRK14286	372	PRK14286, PRK14286, chaperone protein DnaJ; Provis	1e-13
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	1e-12
COG2214	237	COG2214, CbpA, DnaJ-class molecular chaperone [Pos	5e-12
PRK14300	372	PRK14300, PRK14300, chaperone protein DnaJ; Provis	5e-12
COG5407	610	COG5407, SEC63, Preprotein translocase subunit Sec	6e-10
PRK14288	369	PRK14288, PRK14288, chaperone protein DnaJ; Provis	2e-09
COG5269	379	COG5269, ZUO1, Ribosome-associated chaperone zuoti	4e-06
PRK09430	267	PRK09430, djlA, Dna-J like membrane chaperone prot	6e-05
PHA03102	153	PHA03102, PHA03102, Small T antigen; Reviewed	8e-04
PTZ00341	1136	PTZ00341, PTZ00341, Ring-infected erythrocyte surf	0.001
PHA02624	647	PHA02624, PHA02624, large T antigen; Provisional	0.003

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score =  105 bits (264), Expect = 1e-25
 Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 11/108 (10%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDS 164
            +DYY ILGV +  S EEI+KAYRKL+ K HPD+N     +EE FK++ +A++ LSD + 
Sbjct: 3   KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEK 62

Query: 165 RRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFG 212
           R  YD  G    F+                 F     D  +IF  FFG
Sbjct: 63  RAAYDQFG-HAGFKAGGFG---------GFGFGGFGGDFGDIFEDFFG 100

Length = 371

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score = 95.3 bits (238), Expect = 6e-25
 Identities = 36/63 (57%), Positives = 45/63 (71%), Gaps = 1/63 (1%)

Query: 108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG-SEEAFKKVCKAFKCLSDDDSRR 166
           DYY ILGV R  S EEI+KAYRKL+LK HPDKN     +EE FK++ +A++ LSD + R 
Sbjct: 1   DYYEILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVLSDPEKRA 60

Query: 167 HYD 169
            YD
Sbjct: 61  IYD 63

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 97.3 bits (243), Expect = 8e-23
 Identities = 48/124 (38%), Positives = 61/124 (49%), Gaps = 12/124 (9%)

Query: 108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRH 167
           DYY ILGV +  S EEI+KAYRKL+ K HPD+NK   +EE FK++ +A++ LSD + R  
Sbjct: 1   DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQ 60

Query: 168 YD---HVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMF-RTTRVY 223
           YD   H G  +                    FF D     +IF  FFG      R  R  
Sbjct: 61  YDQFGHAGF-NGGGGGGGGGFNG----FDIGFFGDF---GDIFGDFFGGGGGSGRRRRSG 112

Query: 224 RTRG 227
             RG
Sbjct: 113 PRRG 116

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|184612 PRK14298, PRK14298, chaperone protein DnaJ; Provisional

 Score = 94.1 bits (234), Expect = 2e-21
 Identities = 46/109 (42%), Positives = 64/109 (58%), Gaps = 15/109 (13%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           +DYY ILG+ +  SVE+I+KAYRKL++K HPDKNK P +EE FK++ +A+  LSD + R 
Sbjct: 5   RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRA 64

Query: 167 HYD---HVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFG 212
            YD   H G+      + +++     R A    F D      IF  FFG
Sbjct: 65  QYDRFGHAGI------DNQYSAEDIFRGADFGGFGD------IFEMFFG 101

Length = 377

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score = 92.9 bits (231), Expect = 4e-21
 Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 17/139 (12%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           KDYY ILGV R+ + EEI+KAYR+L+ K HPD NK P +EE FK++ +A++ LSD + R+
Sbjct: 3   KDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRK 62

Query: 167 HYD---HVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSF---FGQQDMFRTT 220
            YD   H       +  Q                    + ++I       FG  D+F   
Sbjct: 63  LYDQFGHAAFSGSGQQQQGQEGFSDF---------GGGNIEDILEDVFDIFGFGDIF--G 111

Query: 221 RVYRTRGMRSQEREEFHGA 239
           R   TR  R   +    G 
Sbjct: 112 RRRATRERRKTYQRPVKGE 130

Length = 382

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score = 92.1 bits (230), Expect = 7e-21
 Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 35/132 (26%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG---SEEAFKKVCKAFKCLSDDD 163
           +DYY +LGV R+ S +EI+KAYRKL++K HPD+N  PG   +EE FK++ +A++ LSD  
Sbjct: 4   RDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRN--PGDKEAEEKFKEIKEAYEVLSDPQ 61

Query: 164 SRRHYD---HVGLVDEFEHNQRHNVRPRRRRAQ--------HDFFDDELDPDEIFRSFFG 212
            R  YD   H      FE                        D F D      IF   FG
Sbjct: 62  KRAAYDQYGHAA----FEQG---------GGGGGFGGGGGFGDIFGD------IFGDIFG 102

Query: 213 QQDMFRTTRVYR 224
                   R  R
Sbjct: 103 GGRGGGRQRARR 114

Length = 371

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 91.7 bits (228), Expect = 1e-20
 Identities = 48/111 (43%), Positives = 61/111 (54%), Gaps = 17/111 (15%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           +DYY +LGV +S S +EI+KAYRKLS K HPD NK  G++E FK++ +A++ LSDD  R 
Sbjct: 4   RDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRA 63

Query: 167 HYDHVGLVDEFEHNQRHNVRPRRRRAQHDF-----FDDELDPDEIFRSFFG 212
            YD  G       NQ             DF     F+D      IF SFFG
Sbjct: 64  QYDQFGHAGP---NQGFG---GGGFGGGDFGGGFGFED------IFSSFFG 102

Length = 376

>gnl|CDD|237653 PRK14276, PRK14276, chaperone protein DnaJ; Provisional

 Score = 91.7 bits (228), Expect = 1e-20
 Identities = 36/67 (53%), Positives = 46/67 (68%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR 165
           N +YY  LGV +  S +EI+KAYRKLS K HPD NK PG+EE +K+V +A++ LSD   R
Sbjct: 3   NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKR 62

Query: 166 RHYDHVG 172
             YD  G
Sbjct: 63  AAYDQYG 69

Length = 380

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 83.0 bits (206), Expect = 2e-20
 Identities = 33/55 (60%), Positives = 41/55 (74%), Gaps = 1/55 (1%)

Query: 108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSD 161
           DYY ILGV    S EEI+KAYRKL+LK HPDKN   P +EE FK++ +A++ LSD
Sbjct: 1   DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD 55

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 82.3 bits (204), Expect = 4e-20
 Identities = 32/60 (53%), Positives = 43/60 (71%), Gaps = 2/60 (3%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK--APGSEEAFKKVCKAFKCLSDDDS 164
            DYY ILGV R  S++EI+KAYRKL+LK HPDKN      +EE FK++ +A++ LSD + 
Sbjct: 1   TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPEK 60

Length = 60

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score = 89.6 bits (222), Expect = 5e-20
 Identities = 43/106 (40%), Positives = 56/106 (52%), Gaps = 13/106 (12%)

Query: 108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRH 167
           DYY +LGV R+ S +EI+ AYRKL+LK HPD+NK  G+ E F ++ +A+  LSD + R H
Sbjct: 3   DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAH 62

Query: 168 YDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDE-LDPDEIFRSFFG 212
           YD            R    P       D F     DP +IF   FG
Sbjct: 63  YD------------RFGTAPGAGMPGGDPFGGMGFDPMDIFEQLFG 96

Length = 371

>gnl|CDD|237663 PRK14293, PRK14293, chaperone protein DnaJ; Provisional

 Score = 88.5 bits (220), Expect = 1e-19
 Identities = 32/65 (49%), Positives = 47/65 (72%)

Query: 108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRH 167
           DYY ILGV R    +E+++AYR+L+ K HPD NK PG+E+ FK++ +A++ LSD ++R  
Sbjct: 4   DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRAR 63

Query: 168 YDHVG 172
           YD  G
Sbjct: 64  YDQFG 68

Length = 374

>gnl|CDD|237657 PRK14281, PRK14281, chaperone protein DnaJ; Provisional

 Score = 88.3 bits (219), Expect = 2e-19
 Identities = 39/69 (56%), Positives = 51/69 (73%), Gaps = 5/69 (7%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA---FKKVCKAFKCLSDDD 163
           +DYY +LGV RS   +EI+KAYRKL+LK HPDKN  P ++EA   FK+V +A++ LS+DD
Sbjct: 3   RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKN--PDNKEAEEHFKEVNEAYEVLSNDD 60

Query: 164 SRRHYDHVG 172
            RR YD  G
Sbjct: 61  KRRRYDQFG 69

Length = 397

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 86.1 bits (213), Expect = 3e-19
 Identities = 37/66 (56%), Positives = 51/66 (77%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           KDYYAILGV ++ S +EI+KA++KL+ K HPD NK+PG+EE FK++ +A+  LSD + RR
Sbjct: 4   KDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRR 63

Query: 167 HYDHVG 172
            YD  G
Sbjct: 64  IYDTYG 69

Length = 291

>gnl|CDD|182347 PRK10266, PRK10266, curved DNA-binding protein CbpA; Provisional

 Score = 86.0 bits (213), Expect = 5e-19
 Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 28/137 (20%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           KDYYAI+GV+ +  ++ I+ AYR+L+ K HPD +K P +E  FK+V +A++ LSD+  R 
Sbjct: 4   KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRA 63

Query: 167 HYDHV-------GLVDEFEHN--QRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMF 217
            YD +           +F+H   Q  N          DF       D+IF S FGQ    
Sbjct: 64  EYDQLWQHRNDPQFNRQFQHGDGQSFN--------AEDF-------DDIFSSIFGQHA-- 106

Query: 218 RTTRVYRTRGMRSQERE 234
           R +R  +    R  + E
Sbjct: 107 RQSR--QRPAARGHDIE 121

Length = 306

>gnl|CDD|184604 PRK14283, PRK14283, chaperone protein DnaJ; Provisional

 Score = 84.9 bits (210), Expect = 2e-18
 Identities = 45/115 (39%), Positives = 72/115 (62%), Gaps = 20/115 (17%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           +DYY +LGV+R+   +EI+KAYRKL+ K HPD ++  G+EE FK++ +A+  LSDD+ R+
Sbjct: 5   RDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQ 64

Query: 167 HYD---HVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSF-FGQQDMF 217
            YD   H G+ D F              +Q D F++ ++ ++IF+ F FG  ++F
Sbjct: 65  RYDQFGHAGM-DGF--------------SQEDIFNN-INFEDIFQGFGFGIGNIF 103

Length = 378

>gnl|CDD|237664 PRK14294, PRK14294, chaperone protein DnaJ; Provisional

 Score = 84.0 bits (208), Expect = 5e-18
 Identities = 48/126 (38%), Positives = 59/126 (46%), Gaps = 16/126 (12%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG---SEEAFKKVCKAFKCLSDDD 163
           +DYY ILGV R  S EEI+K+YRKL++K HPD+N  PG   +EE FK+  +A++ LSD  
Sbjct: 4   RDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRN--PGDKEAEELFKEAAEAYEVLSDPK 61

Query: 164 SRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVY 223
            R  YD  G      H               D F    D   IF  FFG     R     
Sbjct: 62  KRGIYDQYG------HEGLSGTGFSGFSGFDDIFSSFGD---IFEDFFGFGGGRRGRS-- 110

Query: 224 RTRGMR 229
           RT    
Sbjct: 111 RTAVRA 116

Length = 366

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 83.9 bits (207), Expect = 5e-18
 Identities = 37/69 (53%), Positives = 51/69 (73%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           +DYY +LGV+R+ SV+E++KAYRKL+ K HPD NKAP +E+ FK+V +A+  LSD   + 
Sbjct: 4   RDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKA 63

Query: 167 HYDHVGLVD 175
           HYD  G  D
Sbjct: 64  HYDQFGHTD 72

Length = 371

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 82.5 bits (204), Expect = 1e-17
 Identities = 44/132 (33%), Positives = 67/132 (50%), Gaps = 15/132 (11%)

Query: 104 KRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSD 161
           +  KDYY ILGV R+ + EEI++AY++L  + HPD++      +E+ FK++ +A++ LSD
Sbjct: 1   REKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSD 60

Query: 162 DDSRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDD------ELDPDEIFRSFFGQQD 215
              R  YD  G V E    Q          +   FF+D       +   +IF  FFG++ 
Sbjct: 61  PQKRAMYDRFGYVGEQPPYQETE-------SGGGFFEDIFKDFENIFNRDIFDIFFGERR 113

Query: 216 MFRTTRVYRTRG 227
                R Y  RG
Sbjct: 114 TQEEQREYARRG 125

Length = 369

>gnl|CDD|237654 PRK14278, PRK14278, chaperone protein DnaJ; Provisional

 Score = 80.9 bits (200), Expect = 6e-17
 Identities = 29/63 (46%), Positives = 44/63 (69%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           +DYY +LGV R+ S  EI++AYRKL+ ++HPD N    ++E FK++  A++ LSD + RR
Sbjct: 3   RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRR 62

Query: 167 HYD 169
             D
Sbjct: 63  IVD 65

Length = 378

>gnl|CDD|184611 PRK14297, PRK14297, chaperone protein DnaJ; Provisional

 Score = 80.6 bits (199), Expect = 6e-17
 Identities = 34/71 (47%), Positives = 50/71 (70%), Gaps = 1/71 (1%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDS 164
           +KDYY +LG+E+  S +EI+KA+RKL++K HPDKNK    +EE FK++ +A++ LSD   
Sbjct: 3   SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQK 62

Query: 165 RRHYDHVGLVD 175
           +  YD  G  D
Sbjct: 63  KAQYDQFGTAD 73

Length = 380

>gnl|CDD|150099 pfam09320, DUF1977, Domain of unknown function (DUF1977)

 Score = 75.0 bits (185), Expect = 7e-17
 Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 20/111 (18%)

Query: 257 LLAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVI 316
           LL+ L  S P YSL  +  Y I RTT K  + +YV    +FD  +   SS  A +E  V 
Sbjct: 1   LLSQLFSSSPPYSLTPSSKYTIKRTTPKLKVPYYVNP--NFDSKY--SSSKLAELEKKVE 56

Query: 317 KDYRNLLWRYCHVELQKR----------------RWNKNLPTPHCNKLENL 351
           +DY   L   C  E Q++                +  +++ TP C KL +L
Sbjct: 57  EDYVQNLRNNCEREKQRKDQLLNRARFFGDEDLLKKAESMETPSCEKLNDL 107

Members of this family of functionally uncharacterized domains are predominantly found in dnaj-like proteins. Length = 107

>gnl|CDD|237655 PRK14279, PRK14279, chaperone protein DnaJ; Provisional

 Score = 80.5 bits (199), Expect = 9e-17
 Identities = 33/65 (50%), Positives = 41/65 (63%), Gaps = 1/65 (1%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDS 164
            KD+Y  LGV    S EEI+KAYRKL+ ++HPD N   P +EE FK V +A   LSD   
Sbjct: 8   EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAK 67

Query: 165 RRHYD 169
           R+ YD
Sbjct: 68  RKEYD 72

Length = 392

>gnl|CDD|237658 PRK14284, PRK14284, chaperone protein DnaJ; Provisional

 Score = 79.5 bits (196), Expect = 2e-16
 Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 5/68 (7%)

Query: 108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA---FKKVCKAFKCLSDDDS 164
           DYY ILGV ++ S EEI+KAYRKL++K HPDKN  PG  EA   FK+V +A++ LSD   
Sbjct: 2   DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKN--PGDAEAEKRFKEVSEAYEVLSDAQK 59

Query: 165 RRHYDHVG 172
           R  YD  G
Sbjct: 60  RESYDRYG 67

Length = 391

>gnl|CDD|237665 PRK14295, PRK14295, chaperone protein DnaJ; Provisional

 Score = 79.5 bits (196), Expect = 2e-16
 Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDS 164
            KDYY +LGV +  +  EI+KAYRKL+ + HPD NK    +EE FK++ +A+  LSD+  
Sbjct: 8   EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKK 67

Query: 165 RRHYD 169
           R+ YD
Sbjct: 68  RKEYD 72

Length = 389

>gnl|CDD|172778 PRK14290, PRK14290, chaperone protein DnaJ; Provisional

 Score = 79.2 bits (195), Expect = 2e-16
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 13/109 (11%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPD---KNKAPGSEEAFKKVCKAFKCLSDDD 163
           KDYY ILGV+R+ S E+I+KA+R+L+ K HPD    NKA  +EE FK++ +A++ LSD  
Sbjct: 3   KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAE-AEEKFKEISEAYEVLSDPQ 61

Query: 164 SRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFG 212
            RR YD  G VD        N          D F    D ++IF   FG
Sbjct: 62  KRRQYDQTGTVDFGAGGSNFN---------WDNFTHFSDINDIFNQIFG 101

Length = 365

>gnl|CDD|237660 PRK14289, PRK14289, chaperone protein DnaJ; Provisional

 Score = 79.1 bits (195), Expect = 2e-16
 Identities = 34/69 (49%), Positives = 48/69 (69%), Gaps = 5/69 (7%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA---FKKVCKAFKCLSDDD 163
           +DYY +LGV ++ +V+EI+KAYRK +++ HPDKN  PG +EA   FK+  +A+  LSD D
Sbjct: 5   RDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKN--PGDKEAEEKFKEAAEAYDVLSDPD 62

Query: 164 SRRHYDHVG 172
            R  YD  G
Sbjct: 63  KRSRYDQFG 71

Length = 386

>gnl|CDD|172773 PRK14285, PRK14285, chaperone protein DnaJ; Provisional

 Score = 78.9 bits (194), Expect = 2e-16
 Identities = 51/146 (34%), Positives = 73/146 (50%), Gaps = 23/146 (15%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA---FKKVCKAFKCLSDDD 163
           +DYY ILG+ +  S +EI+KAYRK+++K HPDKNK  G++EA   FK+  +A++ L DD+
Sbjct: 3   RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNK--GNKEAESIFKEATEAYEVLIDDN 60

Query: 164 SRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVY 223
            R  YD  G    FE                D F+D  D   IF SFF            
Sbjct: 61  KRAQYDRFGHT-AFEGGGGFEGFSGGFSGFSDIFEDFGD---IFDSFF------------ 104

Query: 224 RTRGMRSQEREEFHGAGLNFVFLLQI 249
              G R Q++   H  G +  + ++I
Sbjct: 105 --TGNRGQDKNRKHEKGQDLTYQIEI 128

Length = 365

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 76.9 bits (189), Expect = 1e-15
 Identities = 30/68 (44%), Positives = 45/68 (66%)

Query: 105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDS 164
           + KDYY +LGV ++ S +EIR+AYRKL+ + HPD NK+P + +   ++ +A   L D D 
Sbjct: 2   KKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDK 61

Query: 165 RRHYDHVG 172
           R+ YD  G
Sbjct: 62  RKQYDQFG 69

Length = 372

>gnl|CDD|184599 PRK14277, PRK14277, chaperone protein DnaJ; Provisional

 Score = 76.8 bits (189), Expect = 1e-15
 Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 9/127 (7%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA---FKKVCKAFKCLSDDD 163
           KDYY ILGV+R+ + EEI+KAYR+L+ K HPD N  PG +EA   FK++ +A++ LSD  
Sbjct: 5   KDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLN--PGDKEAEQKFKEINEAYEILSDPQ 62

Query: 164 SRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFD-DELDPDEIFRSFFGQQDMFRTTRV 222
            R  YD  G    F+          +       FD D     +IF   FG  D F T R 
Sbjct: 63  KRAQYDQFGHA-AFDPGGFGQGGFGQGGFGGGGFDFDFGGFGDIFEDIFG--DFFGTGRR 119

Query: 223 YRTRGMR 229
               G +
Sbjct: 120 RAETGPQ 126

Length = 386

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score = 74.9 bits (184), Expect = 7e-15
 Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 3/67 (4%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR 165
           N+  Y +L + + C+  EI+KAYRKL++K HPDK    G  E FK++ +A++ LSD + R
Sbjct: 27  NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKG---GDPEKFKEISRAYEVLSDPEKR 83

Query: 166 RHYDHVG 172
           + YD  G
Sbjct: 84  KIYDEYG 90

Length = 421

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 74.0 bits (182), Expect = 1e-14
 Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSR 165
           +DYY +LGV R  S +EI+KAYRKL+L+ HPD+N   P +E+ FK+  +A++ L D + R
Sbjct: 4   RDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKR 63

Query: 166 RHYDHVG 172
             YD  G
Sbjct: 64  ARYDRFG 70

Length = 373

>gnl|CDD|172774 PRK14286, PRK14286, chaperone protein DnaJ; Provisional

 Score = 70.8 bits (173), Expect = 1e-13
 Identities = 44/108 (40%), Positives = 58/108 (53%), Gaps = 6/108 (5%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDS 164
            + YY ILGV +S + EEI+ AYRKL++K HPDKNK    SEE FK+  +A++ L D   
Sbjct: 3   ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKK 62

Query: 165 RRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFG 212
           R+ YD  G     +           + A  DF D   D  +IF  FFG
Sbjct: 63  RQAYDQFG-----KAGVNAGAGGFGQGAYTDFSDIFGDFGDIFGDFFG 105

Length = 372

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 69.1 bits (168), Expect = 1e-12
 Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 26/109 (23%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           +DYY +LG++R    +EI+KA+RKL+ K HPD+NKAP +   F ++ +A   LS+   R 
Sbjct: 2   RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRA 61

Query: 167 HYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDE----LDPDEIFRSFF 211
           +YD  G                     HD  D E       D +F SFF
Sbjct: 62  NYDKYG---------------------HDGVDREDDFDFQAD-VFNSFF 88

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|225124 COG2214, CbpA, DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

 Score = 64.5 bits (156), Expect = 5e-12
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 9/115 (7%)

Query: 102 QIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG--SEEAFKKVCKAFKCL 159
            +    DYY ILGV  + S+EEI+KAYRKL+LK HPD+N      +EE FK++ +A++ L
Sbjct: 1   MMSDLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEIL 60

Query: 160 SDDDSRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQ 214
           SD + R  YD +G       N       R   A     +  L    ++  + G++
Sbjct: 61  SDPERRAEYDKIG-----ADNYFPGKSYRESAAFP--IEGSLQLTGLYEEWRGKR 108

Length = 237

>gnl|CDD|172788 PRK14300, PRK14300, chaperone protein DnaJ; Provisional

 Score = 65.8 bits (160), Expect = 5e-12
 Identities = 49/153 (32%), Positives = 71/153 (46%), Gaps = 25/153 (16%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR 165
           ++DYY ILGV ++ S  +++KAY KL+ + HPD   A  +E+ FK++  A+  L D+  R
Sbjct: 2   SQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKR 61

Query: 166 RHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRT 225
             YD  G      H+   N + R     H  F    D ++IF  FF   D    +R  R+
Sbjct: 62  AAYDRFG------HDAFQNQQSRGGGGNHGGFHP--DINDIFGDFF--SDFMGGSR--RS 109

Query: 226 RGMRSQER-------------EEFHGAGLNFVF 245
           R   S+ R             E FHG   N  F
Sbjct: 110 RPTSSKVRGSDLKYNLTINLEEAFHGIEKNISF 142

Length = 372

>gnl|CDD|227694 COG5407, SEC63, Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

 Score = 60.4 bits (146), Expect = 6e-10
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 10/90 (11%)

Query: 100 IRQIKRNK----DYYAILGVERSCSVEEIRKAYRKLSLKVHPDK--NKAPGS----EEAF 149
           IR +K       D Y ILG+++  S  +I+K YR LS+K HPDK            EE +
Sbjct: 87  IRTLKIEYRRGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKY 146

Query: 150 KKVCKAFKCLSDDDSRRHYDHVGLVDEFEH 179
           K + KA+  L+D   R +Y + G  D  +H
Sbjct: 147 KTITKAYGLLTDKKRRENYLNYGTPDSPQH 176

Length = 610

>gnl|CDD|172776 PRK14288, PRK14288, chaperone protein DnaJ; Provisional

 Score = 58.2 bits (140), Expect = 2e-09
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)

Query: 109 YYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG-SEEAFKKVCKAFKCLSDDDSRRH 167
           YY IL VE+  + E I+K+YRKL+LK HPD+N     +EE FK + +A+  LSD+  R  
Sbjct: 5   YYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRAL 64

Query: 168 YDHVG 172
           YD  G
Sbjct: 65  YDRYG 69

Length = 369

>gnl|CDD|227594 COG5269, ZUO1, Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 31/97 (31%), Positives = 44/97 (45%), Gaps = 14/97 (14%)

Query: 108 DYYAILGVER---SCSVEEIRKAYRKLSLKVHPDKNKAPGS---EEAFKKVCKAFKCLSD 161
           D YA+LG+ +        +I KA++K   K HPDK  A G+   +E FK + KA + L D
Sbjct: 44  DLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGD 103

Query: 162 DDSRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFD 198
              R  YD              +V P R     +FF+
Sbjct: 104 RKLRLQYDSNDFDA--------DVPPPRIYTPDEFFE 132

Length = 379

>gnl|CDD|236512 PRK09430, djlA, Dna-J like membrane chaperone protein; Provisional

 Score = 43.6 bits (104), Expect = 6e-05
 Identities = 17/33 (51%), Positives = 23/33 (69%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDK 139
           +D Y +LGV  S   +EI++AYRKL  + HPDK
Sbjct: 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDK 232

Length = 267

>gnl|CDD|222986 PHA03102, PHA03102, Small T antigen; Reviewed

 Score = 38.9 bits (91), Expect = 8e-04
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 113 LGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRH 167
           LG+ RS   ++  +RKAY +  L+ HPDK    G EE  K++   +K   +      
Sbjct: 11  LGLPRSAWGNLPLMRKAYLRKCLEFHPDKG---GDEEKMKELNTLYKKFRESVKSLR 64

Length = 153

>gnl|CDD|173534 PTZ00341, PTZ00341, Ring-infected erythrocyte surface antigen; Provisional

 Score = 40.5 bits (94), Expect = 0.001
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 109 YYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHY 168
           +Y ILGV  +  ++EI + Y KL+   +P K         FKK+ +A++ L D D ++ Y
Sbjct: 575 FYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMY 634

Query: 169 DHVG 172
           +  G
Sbjct: 635 NKFG 638

Length = 1136

>gnl|CDD|222912 PHA02624, PHA02624, large T antigen; Provisional

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 113 LGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRH 167
           LG+  +   ++  +RKAY +   + HPDK    G EE  K++   +K L +      
Sbjct: 17  LGLPMAAWGNLPLMRKAYLRKCKEYHPDKG---GDEEKMKRLNSLYKKLQEGVKSAR 70

Length = 647

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	352
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.94
PF09320	107	DUF1977: Domain of unknown function (DUF1977); Int	99.93
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	99.9
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	99.89
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	99.87
PRK14296	372	chaperone protein DnaJ; Provisional	99.86
PRK14288	369	chaperone protein DnaJ; Provisional	99.86
PRK14286	372	chaperone protein DnaJ; Provisional	99.85
PRK14299	291	chaperone protein DnaJ; Provisional	99.85
PRK14287	371	chaperone protein DnaJ; Provisional	99.84
PRK14280	376	chaperone protein DnaJ; Provisional	99.83
PRK14276	380	chaperone protein DnaJ; Provisional	99.83
PRK14285	365	chaperone protein DnaJ; Provisional	99.83
PRK14298	377	chaperone protein DnaJ; Provisional	99.83
PRK14278	378	chaperone protein DnaJ; Provisional	99.82
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.82
PRK14297	380	chaperone protein DnaJ; Provisional	99.82
PRK14277	386	chaperone protein DnaJ; Provisional	99.82
PRK14294	366	chaperone protein DnaJ; Provisional	99.81
PRK14282	369	chaperone protein DnaJ; Provisional	99.81
PRK14291	382	chaperone protein DnaJ; Provisional	99.81
PRK14301	373	chaperone protein DnaJ; Provisional	99.79
PRK14292	371	chaperone protein DnaJ; Provisional	99.79
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.79
PRK14283	378	chaperone protein DnaJ; Provisional	99.79
PRK14281	397	chaperone protein DnaJ; Provisional	99.78
PRK14284	391	chaperone protein DnaJ; Provisional	99.78
PRK14290	365	chaperone protein DnaJ; Provisional	99.78
PRK10767	371	chaperone protein DnaJ; Provisional	99.78
PRK14279	392	chaperone protein DnaJ; Provisional	99.76
PRK14295	389	chaperone protein DnaJ; Provisional	99.76
PRK14300	372	chaperone protein DnaJ; Provisional	99.76
PRK14293	374	chaperone protein DnaJ; Provisional	99.76
PRK10266	306	curved DNA-binding protein CbpA; Provisional	99.75
PRK14289	386	chaperone protein DnaJ; Provisional	99.75
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	99.74
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.73
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	99.72
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	99.72
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	99.71
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	99.7
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.69
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	99.68
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	99.66
PHA03102	153	Small T antigen; Reviewed	99.64
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	99.59
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.59
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.59
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.57
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	99.54
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	99.53
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.53
PRK05014	171	hscB co-chaperone HscB; Provisional	99.37
PRK01356	166	hscB co-chaperone HscB; Provisional	99.35
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	99.32
PRK00294	173	hscB co-chaperone HscB; Provisional	99.29
PRK03578	176	hscB co-chaperone HscB; Provisional	99.27
PTZ00100	116	DnaJ chaperone protein; Provisional	99.22
PHA02624	647	large T antigen; Provisional	99.2
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.12
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	99.07
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	98.99
PRK01773	173	hscB co-chaperone HscB; Provisional	98.84
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	98.78
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	98.75
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	98.08
KOG0568	342	consensus Molecular chaperone (DnaJ superfamily) [	98.02
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	97.73
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	97.65
KOG3192	168	consensus Mitochondrial J-type chaperone [Posttran	96.38
PF07719	34	TPR_2: Tetratricopeptide repeat; InterPro: IPR0131	96.38
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	96.12
PF00515	34	TPR_1: Tetratricopeptide repeat; InterPro: IPR0014	96.08
KOG0431	453	consensus Auxilin-like protein and related protein	95.7
PF13428	44	TPR_14: Tetratricopeptide repeat	95.36
PF13181	34	TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_	94.38
PF14853	53	Fis1_TPR_C: Fis1 C-terminal tetratricopeptide repe	94.34
PF13414	69	TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A	94.17
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	93.2
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	92.68
PF13414	69	TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A	92.36
PF14559	68	TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN	91.46
PF13176	36	TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_	91.37
PF13174	33	TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_	90.61
TIGR03504	44	FimV_Cterm FimV C-terminal domain. This protein is	90.53
smart00028	34	TPR Tetratricopeptide repeats. Repeats present in	90.35
KOG0553	304	consensus TPR repeat-containing protein [General f	89.96
PF13432	65	TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL	89.7
PF13432	65	TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL	89.24
PF14559	68	TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN	85.87
PF14863	141	Alkyl_sulf_dimr: Alkyl sulfatase dimerisation; PDB	84.76
PF13371	73	TPR_9: Tetratricopeptide repeat	84.52
PF13374	42	TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT	81.76
PRK10370	198	formate-dependent nitrite reductase complex subuni	81.58
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	80.77

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.94  E-value=1.4e-27  Score=234.00  Aligned_cols=99  Identities=42%  Similarity=0.703  Sum_probs=82.0

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHN  184 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~  184 (352)
                      .+|||+||||+++||.+||||||||||++||||+|+ +++|+++|++|++||+|||||+||+.||++|. .++..+.   
T Consensus         3 ~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~-~~~~~gg---   78 (371)
T COG0484           3 KRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDPEKRAAYDQFGH-AGFKAGG---   78 (371)
T ss_pred             ccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHhhccCc-cccccCC---
Confidence            689999999999999999999999999999999999 89999999999999999999999999999998 5543110   


Q ss_pred             CCCCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551          185 VRPRRRRAQHDFFDDELDPDEIFRSFFGQQ  214 (352)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~pediF~~fFGg~  214 (352)
                        .+ +.+.++ |+.  ++.|||..||||+
T Consensus        79 --~g-g~g~~~-fgg--~~~DIF~~~FgGg  102 (371)
T COG0484          79 --FG-GFGFGG-FGG--DFGDIFEDFFGGG  102 (371)
T ss_pred             --cC-CCCcCC-CCC--CHHHHHHHhhcCC
Confidence              00 001112 221  7899999999755

>PF09320 DUF1977: Domain of unknown function (DUF1977); InterPro: IPR015399 This C-terminal domain is functionally uncharacterised and predominantly found in Dnaj-like proteins

Probab=99.93  E-value=3.9e-26  Score=189.44  Aligned_cols=90  Identities=33%  Similarity=0.563  Sum_probs=83.0

Q ss_pred             HHhcCCCCCCccccCCCCccceeeccCCCceeeccCCccccccCCCCchhhHhhHHHHHHHHHHHHHHHHHHHHHHH---
Q 047551          258 LAYLPYSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSARAVIEDNVIKDYRNLLWRYCHVELQKR---  334 (352)
Q Consensus       258 ~~~~~~~~P~ysl~~~~~~~~~r~T~~~~v~yyV~~~~~f~~~~~~~~~~~~~lE~~Ve~~y~~~l~~~C~~e~~~~---  334 (352)
                      ++.|++++|+|||+++++|+++|+|++++|+|||++  +|..+|  +++++++||++||.+||++|+++|++|++++   
T Consensus         2 ~s~l~s~~P~yS~~~s~~y~~~R~T~~~~V~YYV~~--~f~~~y--~~~~l~~lE~~VE~~yv~~L~~~C~~E~~~r~~l   77 (107)
T PF09320_consen    2 LSSLFSSDPSYSFTPSSPYTVERTTPNLKVPYYVNP--DFVQKY--SSSKLRQLERQVENDYVQNLRNQCERERQYRERL   77 (107)
T ss_pred             ccccCCCCCCeeecCCCCCceeeEcCCCCcceeECc--hhhhhc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            566677899999999999999999999999999998  999999  5678999999999999999999999998765   


Q ss_pred             -------------HHHhhCCCCCchhhhcC
Q 047551          335 -------------RWNKNLPTPHCNKLENL  351 (352)
Q Consensus       335 -------------~~a~~~~~psC~~L~~l  351 (352)
                                   .||+.|++|||++|++|
T Consensus        78 ~~~a~~~~d~~~~~~A~~~~~psCd~L~~L  107 (107)
T PF09320_consen   78 IERARFYGDEEKLEKAQNMPMPSCDRLKKL  107 (107)
T ss_pred             HHHHHHccCHHHHHHHHhCCCchHHHHhcC
Confidence                         47889999999999986

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.90  E-value=4e-24  Score=205.33  Aligned_cols=76  Identities=45%  Similarity=0.833  Sum_probs=71.5

Q ss_pred             HHhcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhh
Q 047551          102 QIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE  178 (352)
Q Consensus       102 ~~~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~  178 (352)
                      -+...+|||+||||+++|++.|||+||||||+++|||||+ +|.|.+.|++|+.||+|||||++|+.||.+|+ ++..
T Consensus        11 ~v~~~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDpekRk~YD~~GE-egL~   87 (336)
T KOG0713|consen   11 AVLAGRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDPEKRKHYDTYGE-EGLK   87 (336)
T ss_pred             hhhcCCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHhhhH-hhhc
Confidence            4457899999999999999999999999999999999998 68999999999999999999999999999998 7665

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=99.89  E-value=4.4e-23  Score=198.63  Aligned_cols=124  Identities=32%  Similarity=0.451  Sum_probs=108.6

Q ss_pred             CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHhcCCCCCCCCCCCcccccccccCCCcccccc
Q 047551            4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEKLGVGDSGPNVSSADEKRLDDQRSKPGLEKL   82 (352)
Q Consensus         4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (352)
                      ..|++.-.++.|+.+|-..+|+.|+..++||+.++|+.. +++-|...+++                             
T Consensus       337 d~~dv~~l~dRAeA~l~dE~YD~AI~dye~A~e~n~sn~~~reGle~Akrl-----------------------------  387 (504)
T KOG0624|consen  337 DPDDVQVLCDRAEAYLGDEMYDDAIHDYEKALELNESNTRAREGLERAKRL-----------------------------  387 (504)
T ss_pred             CchHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-----------------------------
Confidence            357788889999999999999999999999999999865 67777666655                             


Q ss_pred             cCCCCCCCCCCHHHHHHHHHHhcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC----CcHHHHHHHHHHHHh
Q 047551           83 GEGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP----GSEEAFKKVCKAFKC  158 (352)
Q Consensus        83 ~~~~~~~~~~t~~~~~~~~~~~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~----~a~e~f~~I~~Ay~v  158 (352)
                                        .+....+|||+||||.++|+..||.|||||+|.+||||..++.    .|+.+|..|..|-+|
T Consensus       388 ------------------kkqs~kRDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEV  449 (504)
T KOG0624|consen  388 ------------------KKQSGKRDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEV  449 (504)
T ss_pred             ------------------HHHhccchHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHh
Confidence                              3344689999999999999999999999999999999988754    488999999999999


Q ss_pred             cCchhhhhhhcccCCc
Q 047551          159 LSDDDSRRHYDHVGLV  174 (352)
Q Consensus       159 Lsd~~kR~~YD~~g~~  174 (352)
                      ||||++|+.||.+-++
T Consensus       450 Lsd~EkRrqFDnGeDP  465 (504)
T KOG0624|consen  450 LSDPEKRRQFDNGEDP  465 (504)
T ss_pred             hcCHHHHhhccCCCCC
Confidence            9999999999987653

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.87  E-value=1.4e-22  Score=196.46  Aligned_cols=70  Identities=49%  Similarity=0.799  Sum_probs=65.8

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE  178 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~  178 (352)
                      ...||+||||+++|+.+|||||||+||++||||||+  .+.++|++|+.||+|||||+||.+||++|+ ++..
T Consensus         3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~--~~~ekfkei~~AyevLsd~ekr~~yD~~g~-~~~~   72 (337)
T KOG0712|consen    3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNP--DAGEKFKEISQAYEVLSDPEKREIYDQYGE-EGLQ   72 (337)
T ss_pred             ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCc--cHHHHHHHHHHHHHHhcCHHHHHHHHhhhh-hhhc
Confidence            578999999999999999999999999999999995  489999999999999999999999999998 6654

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=3.6e-22  Score=198.57  Aligned_cols=71  Identities=44%  Similarity=0.795  Sum_probs=67.3

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF  177 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~  177 (352)
                      .+|||+||||+++|+.+|||+|||+||++||||+|+.+.|+++|++|++||+|||||+||+.||++|. .+.
T Consensus         3 ~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~-~~~   73 (372)
T PRK14296          3 KKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDKDKRKQYDQFGH-AAF   73 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCHHHhhhhhhccc-hhh
Confidence            47999999999999999999999999999999999888899999999999999999999999999997 443

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.86  E-value=5.8e-22  Score=196.87  Aligned_cols=68  Identities=46%  Similarity=0.750  Sum_probs=65.0

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++||.+|||+|||+||++||||+|+ ++.|+++|++|++||+|||||+||+.||++|.
T Consensus         2 ~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~   70 (369)
T PRK14288          2 ELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDEKKRALYDRYGK   70 (369)
T ss_pred             CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccHHHHHHHHHhcc
Confidence            479999999999999999999999999999999997 56789999999999999999999999999997

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=1.7e-21  Score=193.67  Aligned_cols=104  Identities=42%  Similarity=0.631  Sum_probs=79.4

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHN  184 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~  184 (352)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+ .+.|+++|++|++||+||+||.+|+.||++|. ++...+.   
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~-~g~~~~~---   78 (372)
T PRK14286          3 ERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDPKKRQAYDQFGK-AGVNAGA---   78 (372)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHHhCc-hhhcccc---
Confidence            469999999999999999999999999999999997 46789999999999999999999999999997 5443110   


Q ss_pred             CCCCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551          185 VRPRRRRAQHDFFDDELDPDEIFRSFFGQQ  214 (352)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~pediF~~fFGg~  214 (352)
                      .+ ...++..+|.....+++|+|..|||++
T Consensus        79 ~~-~~~~~~~~~~~~~~~~~d~f~~ffgg~  107 (372)
T PRK14286         79 GG-FGQGAYTDFSDIFGDFGDIFGDFFGGG  107 (372)
T ss_pred             CC-CCCCCcccccccccchhhHHHHhhCCC
Confidence            00 000111111100125679999999853

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.85  E-value=3.4e-21  Score=185.74  Aligned_cols=106  Identities=42%  Similarity=0.662  Sum_probs=80.6

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNV  185 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~  185 (352)
                      ..|||+||||+++||.++||+|||+||++||||+|+.+.++++|+.|++||+|||||.+|+.||.+|. ++...+.... 
T Consensus         3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~-~~~~~~~~~~-   80 (291)
T PRK14299          3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDPEKRRIYDTYGT-TAASAGWQGP-   80 (291)
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCHHHHHHHHhcCC-ccccccccCC-
Confidence            47999999999999999999999999999999999888899999999999999999999999999997 4322110000 


Q ss_pred             CCCCcCCCCCCCCC-CCChHHHHHhhhCCC
Q 047551          186 RPRRRRAQHDFFDD-ELDPDEIFRSFFGQQ  214 (352)
Q Consensus       186 ~~~~~~~~~~~~~~-~~~pediF~~fFGg~  214 (352)
                       ....++.++|-.. ..+++++|..||||.
T Consensus        81 -~~~~~~~~~~~~~~~~~~~d~f~~~fgg~  109 (291)
T PRK14299         81 -PPGPPGGGDFSGFNVGDFSDFFQQLFGGR  109 (291)
T ss_pred             -CCCCCCCCCccccCcCCHHHHHHHHhCCC
Confidence             0000111111111 135789999999863

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.84  E-value=3.1e-21  Score=191.83  Aligned_cols=97  Identities=44%  Similarity=0.779  Sum_probs=78.9

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNV  185 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~  185 (352)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+.+.|+++|+.|++||+||+||.+|+.||++|. ++...+.    
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~-~~~~~~~----   77 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDPQKKAHYDQFGH-TDPNQGF----   77 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcHhHHHHHHhhCC-ccccccc----
Confidence            46999999999999999999999999999999999888899999999999999999999999999997 4432100    


Q ss_pred             CCCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551          186 RPRRRRAQHDFFDDELDPDEIFRSFFGQQ  214 (352)
Q Consensus       186 ~~~~~~~~~~~~~~~~~pediF~~fFGg~  214 (352)
                        + +++..+| .   +++|+|..|||++
T Consensus        78 --~-~~~~~~f-~---~~~d~f~~~fgg~   99 (371)
T PRK14287         78 --G-GGGAGDF-G---GFSDIFDMFFGGG   99 (371)
T ss_pred             --C-CCCCccc-c---chHHHHHhhhccc
Confidence              0 0111122 1   2579999999853

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=6e-21  Score=190.08  Aligned_cols=101  Identities=44%  Similarity=0.731  Sum_probs=79.5

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNV  185 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~  185 (352)
                      ..|||+||||+++|+.++||+|||+||++||||+|+.+.|+++|++|++||+|||||.+|+.||.+|+ ++...+. +  
T Consensus         3 ~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~-~~~~~~~-~--   78 (376)
T PRK14280          3 KRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDQKRAQYDQFGH-AGPNQGF-G--   78 (376)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccHhHHHHHHhcCc-cccccCc-C--
Confidence            36999999999999999999999999999999999888899999999999999999999999999997 4433110 0  


Q ss_pred             CCCCcCCCCCCCCCCCChHHHHHhhhCC
Q 047551          186 RPRRRRAQHDFFDDELDPDEIFRSFFGQ  213 (352)
Q Consensus       186 ~~~~~~~~~~~~~~~~~pediF~~fFGg  213 (352)
                        ..+.++.+| ...++++|+|..||||
T Consensus        79 --~~~~~~~~~-~~~~~~~d~f~~~fgg  103 (376)
T PRK14280         79 --GGGFGGGDF-GGGFGFEDIFSSFFGG  103 (376)
T ss_pred             --CCCCCCCCc-cccccchhhHHHHhCC
Confidence              000000111 1112467999999975

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=7.6e-21  Score=189.59  Aligned_cols=102  Identities=42%  Similarity=0.628  Sum_probs=79.7

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNV  185 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~  185 (352)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+++.|+++|+.|++||+||+||.+|+.||++|+ ++...+. .. 
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~-~~~~~~~-~~-   79 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDPQKRAAYDQYGA-AGANGGF-GG-   79 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCHhhhhhHhhcCC-ccccCCC-CC-
Confidence            46999999999999999999999999999999999988899999999999999999999999999997 5443110 00 


Q ss_pred             CCCCcCCCCCCC--CCCCChHHHHHhhhCC
Q 047551          186 RPRRRRAQHDFF--DDELDPDEIFRSFFGQ  213 (352)
Q Consensus       186 ~~~~~~~~~~~~--~~~~~pediF~~fFGg  213 (352)
                         ..++.++|.  ....+++|+|..||||
T Consensus        80 ---~~~~~~~~~~~~~~~~~~d~f~~~fgg  106 (380)
T PRK14276         80 ---GAGGFGGFDGSGGFGGFEDIFSSFFGG  106 (380)
T ss_pred             ---CCCCCCCccccccccchhhHHHHHhCc
Confidence               000111110  0112467999999985

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=8.2e-21  Score=188.42  Aligned_cols=103  Identities=41%  Similarity=0.637  Sum_probs=78.3

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNV  185 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~  185 (352)
                      .|||+||||+++|+.+|||+|||+||++||||+|+ .+.|+++|++|++||+||+||.+|+.||.+|. .+...+.   .
T Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~-~~~~~~~---~   78 (365)
T PRK14285          3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDDNKRAQYDRFGH-TAFEGGG---G   78 (365)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCcchhHHHHhcCc-chhccCC---C
Confidence            69999999999999999999999999999999997 45688999999999999999999999999997 4432110   0


Q ss_pred             CCCCcCCCCCCCCCCCChHHHHHhhhCC
Q 047551          186 RPRRRRAQHDFFDDELDPDEIFRSFFGQ  213 (352)
Q Consensus       186 ~~~~~~~~~~~~~~~~~pediF~~fFGg  213 (352)
                      .....++..+|.....+++|+|..|||+
T Consensus        79 ~~~~~~g~~~~~~~~~~~~d~f~~~fgg  106 (365)
T PRK14285         79 FEGFSGGFSGFSDIFEDFGDIFDSFFTG  106 (365)
T ss_pred             ccccCCCccccccccccHHHHHHHhhcC
Confidence            0000011111111113467999999985

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.83  E-value=9.2e-21  Score=188.80  Aligned_cols=100  Identities=43%  Similarity=0.757  Sum_probs=78.8

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNV  185 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~  185 (352)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+.+.++++|++|++||+||+||.+|+.||++|. ++...+ ..  
T Consensus         4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~-~g~~~~-~~--   79 (377)
T PRK14298          4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDAEKRAQYDRFGH-AGIDNQ-YS--   79 (377)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcchHhhhhhhhcCc-cccccc-cC--
Confidence            46999999999999999999999999999999999888899999999999999999999999999997 443311 00  


Q ss_pred             CCCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551          186 RPRRRRAQHDFFDDELDPDEIFRSFFGQQ  214 (352)
Q Consensus       186 ~~~~~~~~~~~~~~~~~pediF~~fFGg~  214 (352)
                       .....+..+|    .++.|+|.+||||+
T Consensus        80 -~~~~~~~~~~----~~~~d~f~~~Fgg~  103 (377)
T PRK14298         80 -AEDIFRGADF----GGFGDIFEMFFGGG  103 (377)
T ss_pred             -cccccccCCc----CcchhhhHhhhcCC
Confidence             0000000111    12468999999853

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=1.3e-20  Score=187.76  Aligned_cols=67  Identities=45%  Similarity=0.746  Sum_probs=65.1

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .|||+||||+++|+.++||+|||+||++||||+|+.+.|+++|+.|++||+||+||.+|+.||.+|.
T Consensus         3 ~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~   69 (378)
T PRK14278          3 RDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDPEKRRIVDLGGD   69 (378)
T ss_pred             CCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchhhhhhhhhccCC
Confidence            6999999999999999999999999999999999888899999999999999999999999999987

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.82  E-value=1.2e-20  Score=190.15  Aligned_cols=88  Identities=38%  Similarity=0.743  Sum_probs=74.2

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNV  185 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~  185 (352)
                      ..|||+||||+++||.+|||+|||+||++||||||+   ..++|++|++||+|||||.||+.||.+|. .+...      
T Consensus        27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~---~~e~F~~i~~AYevLsD~~kR~~YD~~G~-~~~~~------   96 (421)
T PTZ00037         27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGG---DPEKFKEISRAYEVLSDPEKRKIYDEYGE-EGLEG------   96 (421)
T ss_pred             chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCc---hHHHHHHHHHHHHHhccHHHHHHHhhhcc-hhccc------
Confidence            579999999999999999999999999999999985   36899999999999999999999999987 43320      


Q ss_pred             CCCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551          186 RPRRRRAQHDFFDDELDPDEIFRSFFGQQ  214 (352)
Q Consensus       186 ~~~~~~~~~~~~~~~~~pediF~~fFGg~  214 (352)
                           ++  +    ..++.++|..|||++
T Consensus        97 -----~~--~----~~d~~d~f~~~Fggg  114 (421)
T PTZ00037         97 -----GE--Q----PADASDLFDLIFGGG  114 (421)
T ss_pred             -----CC--C----CcchhhhHHHhhccc
Confidence                 00  0    134678999999753

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=2e-20  Score=186.64  Aligned_cols=102  Identities=42%  Similarity=0.724  Sum_probs=78.6

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHN  184 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~  184 (352)
                      ..|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|+.|++||+||+||.+|+.||++|. .++..+.   
T Consensus         3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~-~~~~~~~---   78 (380)
T PRK14297          3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDPQKKAQYDQFGT-ADFNGAG---   78 (380)
T ss_pred             CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCHhhhCchhhcCc-ccccccC---
Confidence            369999999999999999999999999999999997 45689999999999999999999999999997 4433110   


Q ss_pred             CCCCCcCCCCCC-CCCCCChHHHHHhhhCC
Q 047551          185 VRPRRRRAQHDF-FDDELDPDEIFRSFFGQ  213 (352)
Q Consensus       185 ~~~~~~~~~~~~-~~~~~~pediF~~fFGg  213 (352)
                       + .+.++..+| +....+++|+|.+|||+
T Consensus        79 -~-~~~~~~~~~~~~~~~~~~d~f~~~fgg  106 (380)
T PRK14297         79 -G-FGSGGFGGFDFSDMGGFGDIFDSFFGG  106 (380)
T ss_pred             -C-CCCCCCCCcCcccccchhHHHHHHhcc
Confidence             0 000111111 01112467999999985

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.82  E-value=2.6e-20  Score=186.07  Aligned_cols=71  Identities=48%  Similarity=0.833  Sum_probs=66.2

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF  177 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~  177 (352)
                      ..|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|++|++||+|||||.+|+.||.+|. ++.
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~-~~~   75 (386)
T PRK14277          4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQYDQFGH-AAF   75 (386)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCHHHHHHHHhhcc-ccc
Confidence            479999999999999999999999999999999997 46789999999999999999999999999997 444

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=2.5e-20  Score=185.06  Aligned_cols=97  Identities=43%  Similarity=0.732  Sum_probs=77.5

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHN  184 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~  184 (352)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+ .+.+++.|+.|++||+||+||.+|+.||++|+ +++..+    
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~-~g~~~~----   77 (366)
T PRK14294          3 KRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDPKKRGIYDQYGH-EGLSGT----   77 (366)
T ss_pred             CCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccHHHHHHHHhhcc-ccccCC----
Confidence            479999999999999999999999999999999997 46789999999999999999999999999997 544310    


Q ss_pred             CCCCCcCCCCCCCCCC-CChHHHHHhhhC
Q 047551          185 VRPRRRRAQHDFFDDE-LDPDEIFRSFFG  212 (352)
Q Consensus       185 ~~~~~~~~~~~~~~~~-~~pediF~~fFG  212 (352)
                          ..++.++ |... .+..|+|..|||
T Consensus        78 ----~~~~~~~-~~~~~~~~~d~f~~~fg  101 (366)
T PRK14294         78 ----GFSGFSG-FDDIFSSFGDIFEDFFG  101 (366)
T ss_pred             ----CCCCcCc-cccchhhhhhhHHHhhc
Confidence                0011111 1111 235689999998

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=2.7e-20  Score=184.95  Aligned_cols=68  Identities=43%  Similarity=0.795  Sum_probs=64.3

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC--CCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA--PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~--~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+.  +.|++.|++|++||+|||||.+|+.||.+|.
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~   72 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGY   72 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCc
Confidence            4799999999999999999999999999999999963  5688999999999999999999999999987

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.81  E-value=5e-20  Score=183.82  Aligned_cols=71  Identities=52%  Similarity=0.898  Sum_probs=67.2

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF  177 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~  177 (352)
                      ..|||+||||+++|+.++||+|||+||++||||+|+.+.|+++|+.|++||+|||||.+|+.||.+|. .+.
T Consensus         2 ~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~-~~~   72 (382)
T PRK14291          2 KKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDPEKRKLYDQFGH-AAF   72 (382)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCHHHHHHHhhhcc-ccc
Confidence            47999999999999999999999999999999999888899999999999999999999999999997 443

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=1.3e-19  Score=180.45  Aligned_cols=71  Identities=45%  Similarity=0.854  Sum_probs=65.7

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF  177 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~  177 (352)
                      ..|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|+.|++||+||+||.+|+.||.+|. ++.
T Consensus         3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~-~g~   74 (373)
T PRK14301          3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDAEKRARYDRFGH-AGV   74 (373)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcchhhhhhhhhccc-ccc
Confidence            479999999999999999999999999999999997 45688999999999999999999999999997 443

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=1.5e-19  Score=179.69  Aligned_cols=97  Identities=41%  Similarity=0.722  Sum_probs=78.9

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCCCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVR  186 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~~  186 (352)
                      .|||+||||+++|+.++||+|||+||+++|||++..+.|+++|+.|++||+||+||.+|+.||.+|. .+..  .  .  
T Consensus         2 ~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~-~~~~--~--~--   74 (371)
T PRK14292          2 MDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDAEKRAHYDRFGT-APGA--G--M--   74 (371)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcchhhhhhHhhcCC-cccc--c--c--
Confidence            5899999999999999999999999999999999888899999999999999999999999999997 3311  0  0  


Q ss_pred             CCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551          187 PRRRRAQHDFFDDELDPDEIFRSFFGQQ  214 (352)
Q Consensus       187 ~~~~~~~~~~~~~~~~pediF~~fFGg~  214 (352)
                       ...++.+++   .++++|+|..|||+.
T Consensus        75 -~~~~~~~~~---~~d~~d~f~~~fg~~   98 (371)
T PRK14292         75 -PGGDPFGGM---GFDPMDIFEQLFGGA   98 (371)
T ss_pred             -cCCcccCcc---CCChHHHHHHhhCCC
Confidence             000011111   246889999999853

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.79  E-value=1.7e-19  Score=178.24  Aligned_cols=101  Identities=43%  Similarity=0.633  Sum_probs=78.2

Q ss_pred             CchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCCCCC
Q 047551          108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVRP  187 (352)
Q Consensus       108 d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~~~  187 (352)
                      |||+||||+++|+.++||+|||+||++||||+|+.+.++++|+.|++||+||+|+.+|+.||.+|. .+...+.   .. 
T Consensus         1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~-~~~~~~~---~~-   75 (354)
T TIGR02349         1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDPEKRAQYDQFGH-AGFNGGG---GG-   75 (354)
T ss_pred             ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhChHHHHhhhhccc-ccccccC---cC-
Confidence            799999999999999999999999999999999877889999999999999999999999999987 4433110   00 


Q ss_pred             CCcCCCCCCCC-CCCChHHHHHhhhCCC
Q 047551          188 RRRRAQHDFFD-DELDPDEIFRSFFGQQ  214 (352)
Q Consensus       188 ~~~~~~~~~~~-~~~~pediF~~fFGg~  214 (352)
                       ..++..++.. ...++.++|..|||++
T Consensus        76 -~~~~~~~~~~~~~~~~~~~f~~~fg~~  102 (354)
T TIGR02349        76 -GGGGFNGFDIGFFGDFGDIFGDFFGGG  102 (354)
T ss_pred             -CCCCcCCccccCcCchhhhHHHHhccC
Confidence             0011111100 1124679999999853

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.79  E-value=1.2e-19  Score=180.80  Aligned_cols=68  Identities=49%  Similarity=0.909  Sum_probs=66.0

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+.+.|+++|++|++||+|||||.+|+.||++|.
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~   71 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDDEKRQRYDQFGH   71 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchhHHHHHHhhhcc
Confidence            57999999999999999999999999999999999888899999999999999999999999999987

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=2.8e-19  Score=179.34  Aligned_cols=70  Identities=54%  Similarity=0.908  Sum_probs=65.4

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC-CCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchh
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF  177 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~-~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~  177 (352)
                      .|||+||||+++|+.++||+|||+||++||||+|+. +.|++.|+.|++||+||+||.+|+.||.+|. .+.
T Consensus         3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~-~~~   73 (397)
T PRK14281          3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSNDDKRRRYDQFGH-AGV   73 (397)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhccc-hhh
Confidence            699999999999999999999999999999999974 5688999999999999999999999999997 444

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=2.3e-19  Score=179.64  Aligned_cols=67  Identities=52%  Similarity=0.865  Sum_probs=64.1

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|+.|++||+||+||.||+.||++|.
T Consensus         1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~   68 (391)
T PRK14284          1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDAQKRESYDRYGK   68 (391)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCHHHHHHHHhccc
Confidence            48999999999999999999999999999999997 46789999999999999999999999999997

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=4.3e-19  Score=176.14  Aligned_cols=98  Identities=41%  Similarity=0.692  Sum_probs=77.6

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHN  184 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~  184 (352)
                      .|||+||||+++|+.+|||+|||+||+++|||+|+..  .|++.|+.|++||+||+|+.+|+.||.+|. .++..     
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~-~~~~~-----   76 (365)
T PRK14290          3 KDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGT-VDFGA-----   76 (365)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCC-ccccc-----
Confidence            6999999999999999999999999999999999743  588999999999999999999999999997 43321     


Q ss_pred             CCCCCcCCCCCCCCCCCChHHHHHhhhCC
Q 047551          185 VRPRRRRAQHDFFDDELDPDEIFRSFFGQ  213 (352)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~pediF~~fFGg  213 (352)
                      .+  ...+..+ |....+++|+|..|||+
T Consensus        77 ~~--~~~~~~~-~~~~~~~~d~f~~~fg~  102 (365)
T PRK14290         77 GG--SNFNWDN-FTHFSDINDIFNQIFGG  102 (365)
T ss_pred             CC--CCccccc-cccccchhHHHHHHhcC
Confidence            00  0000011 11113578999999985

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.78  E-value=3.6e-19  Score=177.06  Aligned_cols=71  Identities=48%  Similarity=0.855  Sum_probs=65.8

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF  177 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~  177 (352)
                      ..|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|++|++||+||+||.+|+.||.+|. .+.
T Consensus         3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~-~~~   74 (371)
T PRK10767          3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDPQKRAAYDQYGH-AAF   74 (371)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcchhhhhHhhhccc-ccc
Confidence            479999999999999999999999999999999997 46688999999999999999999999999997 443

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=3.1e-19  Score=178.67  Aligned_cols=68  Identities=49%  Similarity=0.776  Sum_probs=64.8

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .+|||+||||+++|+.+|||+|||+||++||||+|+ .+.|+++|++|++||+|||||+||+.||++|+
T Consensus         8 ~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~   76 (392)
T PRK14279          8 EKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDPAKRKEYDETRR   76 (392)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcchhhhhHHHHhhh
Confidence            479999999999999999999999999999999997 56789999999999999999999999999986

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=7.8e-19  Score=175.66  Aligned_cols=68  Identities=47%  Similarity=0.845  Sum_probs=64.2

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcc----cCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDH----VGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~----~g~  173 (352)
                      ..|||+||||+++|+.++||+|||+||++||||+|+ .+.|+++|+.|++||+||+||.+|+.||+    +|.
T Consensus         8 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~   80 (389)
T PRK14295          8 EKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGN   80 (389)
T ss_pred             ccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhcc
Confidence            479999999999999999999999999999999997 45689999999999999999999999998    776

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=9.7e-19  Score=174.05  Aligned_cols=70  Identities=41%  Similarity=0.779  Sum_probs=66.3

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchh
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF  177 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~  177 (352)
                      .|||+||||+++|+.+|||+|||+||++||||++..+.++++|++|++||+||+|+.+|+.||.+|. ++.
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~-~~~   72 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDEQKRAAYDRFGH-DAF   72 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhHhHhhHHHhccc-ccc
Confidence            6999999999999999999999999999999999877889999999999999999999999999997 443

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.76  E-value=1.3e-18  Score=173.31  Aligned_cols=67  Identities=48%  Similarity=0.920  Sum_probs=65.4

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .|||+||||+++|+.++||+|||+||+++|||+|+.+.++++|+.|++||+||+||.+|+.||.+|.
T Consensus         3 ~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~   69 (374)
T PRK14293          3 ADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDPETRARYDQFGE   69 (374)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhchHHHHHHhhccc
Confidence            6999999999999999999999999999999999888899999999999999999999999999987

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=99.75  E-value=1.7e-18  Score=168.10  Aligned_cols=67  Identities=45%  Similarity=0.791  Sum_probs=64.9

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .|||+||||+++|+.++||+|||+||+++|||++..+.++++|+.|++||++|+||.+|+.||.+|.
T Consensus         4 ~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~   70 (306)
T PRK10266          4 KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRAEYDQLWQ   70 (306)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHhhc
Confidence            6999999999999999999999999999999999888899999999999999999999999999875

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.75  E-value=2.2e-18  Score=172.28  Aligned_cols=68  Identities=47%  Similarity=0.872  Sum_probs=64.7

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++|+.+|||+|||+||++||||+|+ .+.|+++|+.|++||+||+||.+|+.||.+|.
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~   72 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDPDKRSRYDQFGH   72 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHhcc
Confidence            479999999999999999999999999999999997 45789999999999999999999999999987

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.74  E-value=5.1e-18  Score=166.81  Aligned_cols=166  Identities=29%  Similarity=0.401  Sum_probs=112.8

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCcccccccccCCCccccc---ccCCC
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGPNVSSADEKRLDDQRSKPGLEK---LGEGL   86 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~   86 (352)
                      =....|...++-|....|+..|+.|+.|||+. +..|+.....+.                ...++..+++.   +.. .
T Consensus       289 lY~nra~v~~rLgrl~eaisdc~~Al~iD~sy-ikall~ra~c~l----------------~le~~e~AV~d~~~a~q-~  350 (486)
T KOG0550|consen  289 LYGNRALVNIRLGRLREAISDCNEALKIDSSY-IKALLRRANCHL----------------ALEKWEEAVEDYEKAMQ-L  350 (486)
T ss_pred             HHHHhHhhhcccCCchhhhhhhhhhhhcCHHH-HHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHh-h
Confidence            35677888899999999999999999999983 333333322210                00001111110   000 0


Q ss_pred             CCCCCCCHH--HHHHHHHHhcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC--CCcHHHHHHHHHHHHhcCch
Q 047551           87 SGERSYTEE--HVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA--PGSEEAFKKVCKAFKCLSDD  162 (352)
Q Consensus        87 ~~~~~~t~~--~~~~~~~~~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~--~~a~e~f~~I~~Ay~vLsd~  162 (352)
                      ..+.+....  +.....+..+.+|||+||||.+++++.+||+|||++|+.+|||++..  ..++..|++|.+||.||+||
T Consensus       351 ~~s~e~r~~l~~A~~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~  430 (486)
T KOG0550|consen  351 EKDCEIRRTLREAQLALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDP  430 (486)
T ss_pred             ccccchHHHHHHHHHHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCH
Confidence            001111111  11223355679999999999999999999999999999999999863  46888999999999999999


Q ss_pred             hhhhhhcccCCcchhhccccCCCCCCCcCCCCCCCCCCCChHHHHHhh
Q 047551          163 DSRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSF  210 (352)
Q Consensus       163 ~kR~~YD~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pediF~~f  210 (352)
                      .+|..||..-+.+...            .  +|   .+|+|..+|+.|
T Consensus       431 ~kr~r~dsg~dle~~~------------~--~~---a~~dp~~~~~a~  461 (486)
T KOG0550|consen  431 MKRVRFDSGQDLEEVG------------S--GG---AGFDPFNIFRAF  461 (486)
T ss_pred             HHHhhcccccchhhhc------------C--CC---cCcChhhhhhhc
Confidence            9999999876533211            1  11   367888888887

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.73  E-value=4.4e-18  Score=181.22  Aligned_cols=69  Identities=30%  Similarity=0.516  Sum_probs=66.1

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ...+||+||||+++|+..+||+|||+||+++||||++.+.|.+.|+.|++||+|||||.+|+.||.+|.
T Consensus       571 ~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~  639 (1136)
T PTZ00341        571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDIDKKKMYNKFGY  639 (1136)
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHhhccc
Confidence            368999999999999999999999999999999999877788999999999999999999999999987

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.72  E-value=3.6e-18  Score=159.89  Aligned_cols=68  Identities=44%  Similarity=0.770  Sum_probs=66.1

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC-CCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~-~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|+|+|||++++|+.++|||+||+|++++|||++++ |.+.++|++||+||+|||||.+|..||.+|+
T Consensus        30 ~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~   98 (279)
T KOG0716|consen   30 RLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDPTKRNVYDEYGE   98 (279)
T ss_pred             hhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcChhhhhhHHHhhh
Confidence            6889999999999999999999999999999999986 8999999999999999999999999999988

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.72  E-value=6.8e-18  Score=162.52  Aligned_cols=87  Identities=40%  Similarity=0.774  Sum_probs=77.0

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCCCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHNVR  186 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~~~  186 (352)
                      .|||+||||+++|+..|||+||++||+++|||.|...+|.+.|+.|.+||+||+|++||..||..|. ..          
T Consensus        43 ~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~-~~----------  111 (288)
T KOG0715|consen   43 EDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDEEKRQEYDVYGL-EQ----------  111 (288)
T ss_pred             cchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCHHHHHHHHHhhh-hc----------
Confidence            4999999999999999999999999999999999999999999999999999999999999999887 21          


Q ss_pred             CCCcCCCCCCCCCCCChHHHHHhhhCC
Q 047551          187 PRRRRAQHDFFDDELDPDEIFRSFFGQ  213 (352)
Q Consensus       187 ~~~~~~~~~~~~~~~~pediF~~fFGg  213 (352)
                         .+      ....+|.++|..+|++
T Consensus       112 ---~~------~~~g~~~~~~~~~~~~  129 (288)
T KOG0715|consen  112 ---HG------EFGGNPFDVFLEFFGG  129 (288)
T ss_pred             ---cc------cccCCccchHHHhhcc
Confidence               00      1122778889999987

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.71  E-value=9.2e-18  Score=161.22  Aligned_cols=90  Identities=38%  Similarity=0.688  Sum_probs=78.7

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHN  184 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~  184 (352)
                      ..|||+||||+.+|+..+|++|||+.|++||||||+ +|.|.+.|+.+.+||+||+|+.+|+.||..|. .+..      
T Consensus         4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k-~~~~------   76 (296)
T KOG0691|consen    4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDEESRAAYDKLRK-SGSS------   76 (296)
T ss_pred             cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCHHHHHHHHHHhh-hccc------
Confidence            689999999999999999999999999999999998 68899999999999999999999999999887 2221      


Q ss_pred             CCCCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551          185 VRPRRRRAQHDFFDDELDPDEIFRSFFGQQ  214 (352)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~pediF~~fFGg~  214 (352)
                           ..       .-.++-++|++-||+.
T Consensus        77 -----~~-------~~~d~~~~~r~~f~~d   94 (296)
T KOG0691|consen   77 -----AQ-------GREDQADGFRKKFGSD   94 (296)
T ss_pred             -----ch-------hhhhHHHHHHHHhhhh
Confidence                 00       1357788999999865

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.70  E-value=1.1e-17  Score=153.55  Aligned_cols=89  Identities=43%  Similarity=0.720  Sum_probs=77.1

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC---CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhcccc
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK---APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQR  182 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~---~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~  182 (352)
                      ..|+|+||||.++|++.+|++||++||++||||+++   ...+++.|+.|+.||+||||.++|+.||..|.+++..    
T Consensus        13 ~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~idd~~----   88 (264)
T KOG0719|consen   13 KKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSIDDES----   88 (264)
T ss_pred             ccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCCCCcc----
Confidence            569999999999999999999999999999999995   3468899999999999999999999999999855322    


Q ss_pred             CCCCCCCcCCCCCCCCCCCChHHHHHhhhC
Q 047551          183 HNVRPRRRRAQHDFFDDELDPDEIFRSFFG  212 (352)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~~~pediF~~fFG  212 (352)
                               |     +-..++-++|+++|-
T Consensus        89 ---------~-----d~~~~~~e~~~~iyk  104 (264)
T KOG0719|consen   89 ---------G-----DIDEDWLEFWRAIYK  104 (264)
T ss_pred             ---------c-----hhhhHHHHHHHHHHh
Confidence                     0     124678899999884

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.69  E-value=1.3e-17  Score=125.04  Aligned_cols=62  Identities=48%  Similarity=0.797  Sum_probs=59.4

Q ss_pred             CchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC--cHHHHHHHHHHHHhcCchhhhhhhc
Q 047551          108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG--SEEAFKKVCKAFKCLSDDDSRRHYD  169 (352)
Q Consensus       108 d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~--a~e~f~~I~~Ay~vLsd~~kR~~YD  169 (352)
                      |||+||||+++++.++||++|+++++++|||++....  +++.|..|++||++|+||.+|+.||
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD   64 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD   64 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence            6899999999999999999999999999999987766  8899999999999999999999998

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.68  E-value=1.9e-17  Score=164.18  Aligned_cols=68  Identities=41%  Similarity=0.702  Sum_probs=63.7

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC--CCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA--PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~--~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .+.||+||||.++|++.+||++||+|||+||||||+.  ..|++.|+.|+.||+|||||..|++||.+.+
T Consensus         7 ~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hre   76 (508)
T KOG0717|consen    7 KRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHRE   76 (508)
T ss_pred             hhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHH
Confidence            5789999999999999999999999999999999875  4578999999999999999999999999866

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.66  E-value=5.9e-17  Score=160.82  Aligned_cols=72  Identities=39%  Similarity=0.712  Sum_probs=66.6

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC----CcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP----GSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE  178 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~----~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~  178 (352)
                      +.|||.+|+|+++||++|||+|||++++.+||||..+|    .|++.|+.|..||+|||||++|++||.+|. .++.
T Consensus         8 e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~-qGL~   83 (546)
T KOG0718|consen    8 EIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGE-QGLK   83 (546)
T ss_pred             hhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhh-cccc
Confidence            56899999999999999999999999999999998865    488999999999999999999999999998 5554

>PHA03102 Small T antigen; Reviewed

Probab=99.64  E-value=3e-16  Score=137.61  Aligned_cols=85  Identities=28%  Similarity=0.422  Sum_probs=72.7

Q ss_pred             CCchhhcCcCCCC--CHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCC
Q 047551          107 KDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHN  184 (352)
Q Consensus       107 ~d~Y~iLgv~~~a--~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~  184 (352)
                      ..+|+||||+++|  |.++||+|||++|+++||||+   +.++.|+.|++||++|+|+.+|..||.+|. +....     
T Consensus         5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkg---g~~e~~k~in~Ay~~L~d~~~r~~yd~~g~-~~~~~-----   75 (153)
T PHA03102          5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKG---GDEEKMKELNTLYKKFRESVKSLRDLDGEE-DSSSE-----   75 (153)
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---chhHHHHHHHHHHHHHhhHHHhccccccCC-ccccc-----
Confidence            3579999999999  999999999999999999997   557899999999999999999999999987 33210     


Q ss_pred             CCCCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551          185 VRPRRRRAQHDFFDDELDPDEIFRSFFGQQ  214 (352)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~pediF~~fFGg~  214 (352)
                                    ..+.|.+.|.+.||+.
T Consensus        76 --------------~~~~~~~~f~~~fg~~   91 (153)
T PHA03102         76 --------------EEDVPSGYVGATFGDR   91 (153)
T ss_pred             --------------ccccHHHHhhhhcCCc
Confidence                          0122899999999876

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.59  E-value=1.5e-15  Score=138.31  Aligned_cols=73  Identities=42%  Similarity=0.715  Sum_probs=67.4

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC-CCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchh
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF  177 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~-~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~  177 (352)
                      +..|+|+||||++++++.|||||||+|++++||||++. .+.++.|..|++||+.|+|+..|..|..+|.++++
T Consensus        97 ~~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PDGp  170 (230)
T KOG0721|consen   97 QKFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKKSRENWEKYGNPDGP  170 (230)
T ss_pred             hcCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchhhHHHHHHhCCCCCc
Confidence            47899999999999999999999999999999999987 56678889999999999999999999999985543

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.59  E-value=1.2e-15  Score=112.63  Aligned_cols=57  Identities=56%  Similarity=0.932  Sum_probs=53.7

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC--CCCcHHHHHHHHHHHHhcCchh
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK--APGSEEAFKKVCKAFKCLSDDD  163 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~--~~~a~e~f~~I~~Ay~vLsd~~  163 (352)
                      .|||+||||+++++.++||++|+++++++|||++.  .+.+++.|+.|++||++|+||.
T Consensus         1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~   59 (60)
T smart00271        1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE   59 (60)
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence            48999999999999999999999999999999997  5678999999999999999985

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.59  E-value=1.8e-15  Score=158.39  Aligned_cols=67  Identities=43%  Similarity=0.803  Sum_probs=64.7

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .|||+||||+++|+..+||+|||+|++++|||++..+.+.++|+.|++||++|+||.+|+.||.+|.
T Consensus         2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP~KRa~YD~fG~   68 (871)
T TIGR03835         2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPKKRANYDKYGH   68 (871)
T ss_pred             CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCHHHHHHHhhhcc
Confidence            6999999999999999999999999999999999888888999999999999999999999999886

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.57  E-value=3e-15  Score=108.37  Aligned_cols=54  Identities=61%  Similarity=0.962  Sum_probs=51.4

Q ss_pred             CchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC-CCcHHHHHHHHHHHHhcCc
Q 047551          108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSD  161 (352)
Q Consensus       108 d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~-~~a~e~f~~I~~Ay~vLsd  161 (352)
                      |||+||||+++++.++||++||+|++++|||++.. ..+.+.|..|++||++|+|
T Consensus         1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            79999999999999999999999999999999976 6789999999999999986

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.54  E-value=6.3e-15  Score=146.45  Aligned_cols=71  Identities=41%  Similarity=0.636  Sum_probs=67.6

Q ss_pred             HHhcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccC
Q 047551          102 QIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG  172 (352)
Q Consensus       102 ~~~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g  172 (352)
                      ++.++.|.|.||||++++++++|||.|||+|.+.|||||..+.|+|+|+.|..||++|+|+++|..||...
T Consensus       230 re~~~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~~kR~eYd~e~  300 (490)
T KOG0720|consen  230 RELNILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDSVKRKEYDLEL  300 (490)
T ss_pred             hhhcCCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcchhhhhHHHHHH
Confidence            45568999999999999999999999999999999999999999999999999999999999999999764

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.53  E-value=1.5e-14  Score=136.04  Aligned_cols=104  Identities=42%  Similarity=0.692  Sum_probs=81.1

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRH  183 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~  183 (352)
                      ..|||+||+|.++|+..+|++|||++|+++|||||+.+  .++.+|++|++||++|+|+.+|..||.+|+ +......  
T Consensus         2 ~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~-~~~~~~~--   78 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGE-EGLKGGG--   78 (306)
T ss_pred             cccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCc-cccccCC--
Confidence            47999999999999999999999999999999998877  566689999999999999999999999998 6554210  


Q ss_pred             CCCCCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551          184 NVRPRRRRAQHDFFDDELDPDEIFRSFFGQQ  214 (352)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~pediF~~fFGg~  214 (352)
                      ..  ........++.....+.++|.+|||..
T Consensus        79 ~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~  107 (306)
T KOG0714|consen   79 SF--SSSFTSELFYFLFRKPDKDFYEFFGVS  107 (306)
T ss_pred             CC--CCCCCCCcceeccCchhhhHHHHhCCC
Confidence            00  000001112334567899999999844

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.53  E-value=9.6e-15  Score=131.13  Aligned_cols=67  Identities=51%  Similarity=0.838  Sum_probs=63.2

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC--cHHHHHHHHHHHHhcCchhhhhhhccc
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG--SEEAFKKVCKAFKCLSDDDSRRHYDHV  171 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~--a~e~f~~I~~Ay~vLsd~~kR~~YD~~  171 (352)
                      ...|||+||||.++|+..+|+++||++|+++|||+++...  +++.|+.|++||++|+|+.+|..||..
T Consensus         4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~   72 (237)
T COG2214           4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKI   72 (237)
T ss_pred             hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhh
Confidence            3679999999999999999999999999999999998554  899999999999999999999999986

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=99.37  E-value=7.6e-13  Score=118.57  Aligned_cols=65  Identities=20%  Similarity=0.385  Sum_probs=57.5

Q ss_pred             CCchhhcCcCCC--CCHHHHHHHHHHhhhhhCCCCCCCCC------cHHHHHHHHHHHHhcCchhhhhhhccc
Q 047551          107 KDYYAILGVERS--CSVEEIRKAYRKLSLKVHPDKNKAPG------SEEAFKKVCKAFKCLSDDDSRRHYDHV  171 (352)
Q Consensus       107 ~d~Y~iLgv~~~--a~~~eIkkaYrkla~~~HPDk~~~~~------a~e~f~~I~~Ay~vLsd~~kR~~YD~~  171 (352)
                      .|||+||||++.  ++..+|+++||+|++++|||+.....      +.+.|+.|++||++|+||.+|+.|+-.
T Consensus         1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll~   73 (171)
T PRK05014          1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLLS   73 (171)
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHHH
Confidence            489999999995  78899999999999999999976432      456799999999999999999999854

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=99.35  E-value=9.1e-13  Score=117.53  Aligned_cols=66  Identities=24%  Similarity=0.417  Sum_probs=57.0

Q ss_pred             CCchhhcCcCCC--CCHHHHHHHHHHhhhhhCCCCCCCCC----cHHHHHHHHHHHHhcCchhhhhhhcccC
Q 047551          107 KDYYAILGVERS--CSVEEIRKAYRKLSLKVHPDKNKAPG----SEEAFKKVCKAFKCLSDDDSRRHYDHVG  172 (352)
Q Consensus       107 ~d~Y~iLgv~~~--a~~~eIkkaYrkla~~~HPDk~~~~~----a~e~f~~I~~Ay~vLsd~~kR~~YD~~g  172 (352)
                      .|||+||||++.  ++..+|+++||+|++++|||++....    +.+.+..|++||++|+||.+|+.|+-..
T Consensus         2 ~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL~l   73 (166)
T PRK01356          2 QNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYMLLL   73 (166)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHc
Confidence            589999999996  78999999999999999999986422    2234789999999999999999998653

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=99.32  E-value=6.3e-13  Score=123.69  Aligned_cols=69  Identities=38%  Similarity=0.683  Sum_probs=66.0

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      +..|.|+||||.+.++..+|.+|||+||+++|||+++.+.+.+.|+.|..||++|.|.+.|..||-..+
T Consensus        31 G~enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~e~rt~ydyald   99 (329)
T KOG0722|consen   31 GAENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDNETRTQYDYALD   99 (329)
T ss_pred             cchhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccchhhHHhHHHHhc
Confidence            367899999999999999999999999999999999999999999999999999999999999998866

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=99.29  E-value=4.4e-12  Score=113.83  Aligned_cols=68  Identities=21%  Similarity=0.334  Sum_probs=59.8

Q ss_pred             cCCCchhhcCcCCC--CCHHHHHHHHHHhhhhhCCCCCCCCC------cHHHHHHHHHHHHhcCchhhhhhhcccC
Q 047551          105 RNKDYYAILGVERS--CSVEEIRKAYRKLSLKVHPDKNKAPG------SEEAFKKVCKAFKCLSDDDSRRHYDHVG  172 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~--a~~~eIkkaYrkla~~~HPDk~~~~~------a~e~f~~I~~Ay~vLsd~~kR~~YD~~g  172 (352)
                      +..|||++|||++.  .+..+|+++||+|++++|||++....      +.+.|..||+||++|+||.+|+.|+-..
T Consensus         2 ~~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL~l   77 (173)
T PRK00294          2 GTPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLLAL   77 (173)
T ss_pred             CCCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence            46899999999996  67899999999999999999986432      4567999999999999999999999643

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=99.27  E-value=5.3e-12  Score=113.62  Aligned_cols=65  Identities=25%  Similarity=0.422  Sum_probs=56.5

Q ss_pred             CCCchhhcCcCCC--CCHHHHHHHHHHhhhhhCCCCCCC-CCcH-----HHHHHHHHHHHhcCchhhhhhhcc
Q 047551          106 NKDYYAILGVERS--CSVEEIRKAYRKLSLKVHPDKNKA-PGSE-----EAFKKVCKAFKCLSDDDSRRHYDH  170 (352)
Q Consensus       106 ~~d~Y~iLgv~~~--a~~~eIkkaYrkla~~~HPDk~~~-~~a~-----e~f~~I~~Ay~vLsd~~kR~~YD~  170 (352)
                      ..|||+||||++.  ++..+|+++||+|++++|||++.. +.++     +.+..||+||++|+||.+|+.|+.
T Consensus         5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll   77 (176)
T PRK03578          5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL   77 (176)
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence            4799999999995  689999999999999999999864 3322     336899999999999999999995

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.22  E-value=1.2e-11  Score=103.67  Aligned_cols=51  Identities=37%  Similarity=0.492  Sum_probs=48.0

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLS  160 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLs  160 (352)
                      .++|+||||+++++.++||++||+|++++|||++   ++.+.|++|++||++|.
T Consensus        65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkg---Gs~~~~~kIneAyevL~  115 (116)
T PTZ00100         65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNG---GSTYIASKVNEAKDLLL  115 (116)
T ss_pred             HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHh
Confidence            5899999999999999999999999999999985   67889999999999985

>PHA02624 large T antigen; Provisional

Probab=99.20  E-value=2.7e-11  Score=125.86  Aligned_cols=61  Identities=28%  Similarity=0.481  Sum_probs=57.4

Q ss_pred             CCCchhhcCcCCCC--CHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhc
Q 047551          106 NKDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYD  169 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a--~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD  169 (352)
                      ..++|+||||+++|  +..+||+|||++|+++||||+   ++++.|+.|+.||++|+|+.+|..|.
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKg---Gdeekfk~Ln~AYevL~d~~k~~r~~   72 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKG---GDEEKMKRLNSLYKKLQEGVKSARQS   72 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CcHHHHHHHHHHHHHHhcHHHhhhcc
Confidence            45789999999999  999999999999999999996   67899999999999999999999994

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.12  E-value=4.7e-11  Score=114.13  Aligned_cols=56  Identities=36%  Similarity=0.518  Sum_probs=50.6

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC--------CCcHHHHHHHHHHHHhcCc
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA--------PGSEEAFKKVCKAFKCLSD  161 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~--------~~a~e~f~~I~~Ay~vLsd  161 (352)
                      -.|+|+||||++++|.++||++||+|++++|||++..        +.++++|+.|++||++|+.
T Consensus       199 ~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~  262 (267)
T PRK09430        199 LEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK  262 (267)
T ss_pred             HHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence            3689999999999999999999999999999999753        2367899999999999975

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=99.07  E-value=8.3e-11  Score=117.01  Aligned_cols=74  Identities=39%  Similarity=0.636  Sum_probs=67.5

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC------CCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhh
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA------PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE  178 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~------~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~  178 (352)
                      +.-|+|+||||+.+++..+||++||+|+.++||||-+.      ..-++.++.|++||..|+|...|..|-.+|.++.++
T Consensus        96 ~~fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~pQ  175 (610)
T COG5407          96 RGFDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDSPQ  175 (610)
T ss_pred             cCCChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCCCc
Confidence            47899999999999999999999999999999999764      235789999999999999999999999999977664

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.99  E-value=4.5e-10  Score=101.50  Aligned_cols=62  Identities=40%  Similarity=0.660  Sum_probs=57.4

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC--CCcHHHHHHHHHHHHhcCchhhhhh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA--PGSEEAFKKVCKAFKCLSDDDSRRH  167 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~--~~a~e~f~~I~~Ay~vLsd~~kR~~  167 (352)
                      +.|+|+||.|.+..+.++||+.||+|++..|||||++  +.|..||-.|.+||.+|-|+..|..
T Consensus        52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr  115 (250)
T KOG1150|consen   52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKR  115 (250)
T ss_pred             ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence            6799999999999999999999999999999999984  6799999999999999999986554

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=98.84  E-value=5.5e-09  Score=93.88  Aligned_cols=65  Identities=17%  Similarity=0.199  Sum_probs=56.9

Q ss_pred             CCchhhcCcCCC--CCHHHHHHHHHHhhhhhCCCCCCCCC------cHHHHHHHHHHHHhcCchhhhhhhccc
Q 047551          107 KDYYAILGVERS--CSVEEIRKAYRKLSLKVHPDKNKAPG------SEEAFKKVCKAFKCLSDDDSRRHYDHV  171 (352)
Q Consensus       107 ~d~Y~iLgv~~~--a~~~eIkkaYrkla~~~HPDk~~~~~------a~e~f~~I~~Ay~vLsd~~kR~~YD~~  171 (352)
                      .|||++|||++.  .+...++++|++|.+++|||+....+      +.+.-..||+||.+|+||-+|+.|=-.
T Consensus         2 ~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL~   74 (173)
T PRK01773          2 NNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAIIA   74 (173)
T ss_pred             CChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHHH
Confidence            589999999996  89999999999999999999986544      334578899999999999999998653

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=98.78  E-value=7.9e-09  Score=91.48  Aligned_cols=54  Identities=20%  Similarity=0.270  Sum_probs=47.2

Q ss_pred             CCHHHHHHHHHHhhhhhCCCCCCCCC------cHHHHHHHHHHHHhcCchhhhhhhcccC
Q 047551          119 CSVEEIRKAYRKLSLKVHPDKNKAPG------SEEAFKKVCKAFKCLSDDDSRRHYDHVG  172 (352)
Q Consensus       119 a~~~eIkkaYrkla~~~HPDk~~~~~------a~e~f~~I~~Ay~vLsd~~kR~~YD~~g  172 (352)
                      .+..+|+++||+|++++|||+.....      +.+.|..|++||++|+||.+|+.|+-..
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL~l   62 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYMLSL   62 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHHHh
Confidence            47789999999999999999965432      5678999999999999999999999754

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=98.75  E-value=1.2e-08  Score=96.06  Aligned_cols=69  Identities=36%  Similarity=0.532  Sum_probs=62.4

Q ss_pred             cCCCchhhcCcCC---CCCHHHHHHHHHHhhhhhCCCCCC---CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          105 RNKDYYAILGVER---SCSVEEIRKAYRKLSLKVHPDKNK---APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       105 ~~~d~Y~iLgv~~---~a~~~eIkkaYrkla~~~HPDk~~---~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      +..|+|.+||++.   .++..+|.++.++.+.+||||+..   +.+..+.|+.|..||+||+|+.+|..||....
T Consensus        41 k~~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~df  115 (379)
T COG5269          41 KKVDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSNDF  115 (379)
T ss_pred             hhhhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhcccccc
Confidence            4689999999997   688999999999999999999974   35678999999999999999999999998754

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=98.08  E-value=3.4e-06  Score=91.40  Aligned_cols=54  Identities=41%  Similarity=0.600  Sum_probs=46.5

Q ss_pred             CCchhhcCcCCC----CCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCch
Q 047551          107 KDYYAILGVERS----CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDD  162 (352)
Q Consensus       107 ~d~Y~iLgv~~~----a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~  162 (352)
                      .+-|+||.|+-+    -..+.||++|+|||.+||||||  |+-.+.|..|++||++|+..
T Consensus      1281 d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKN--PEGRemFe~VnKAYE~L~~~ 1338 (2235)
T KOG1789|consen 1281 DLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKN--PEGREMFERVNKAYELLSSE 1338 (2235)
T ss_pred             HHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCC--chHHHHHHHHHHHHHHHHHH
Confidence            456999999853    3448999999999999999999  67789999999999999843

>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.02  E-value=5.8e-06  Score=76.72  Aligned_cols=57  Identities=30%  Similarity=0.606  Sum_probs=52.8

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHH-hcCch
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFK-CLSDD  162 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~-vLsd~  162 (352)
                      -..+|.||||...|+.++++.+|.+||+++|||........+.|..|.+||. ||+..
T Consensus        46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvlq~~  103 (342)
T KOG0568|consen   46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVLQEK  103 (342)
T ss_pred             HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHHHHH
Confidence            4679999999999999999999999999999999988888999999999999 88743

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.73  E-value=5e-05  Score=62.50  Aligned_cols=49  Identities=33%  Similarity=0.467  Sum_probs=43.1

Q ss_pred             hhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCch
Q 047551          111 AILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDD  162 (352)
Q Consensus       111 ~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~  162 (352)
                      -||||.++++.+.||.|+||+.+..|||+..+|   -.-.+|++|+++|...
T Consensus        60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP---YlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP---YLASKINEAKDLLEGT  108 (112)
T ss_pred             HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH---HHHHHHHHHHHHHhcc
Confidence            489999999999999999999999999998555   4556799999999754

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.65  E-value=6.1e-07  Score=84.31  Aligned_cols=288  Identities=25%  Similarity=0.281  Sum_probs=153.2

Q ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCCCCCCCCccccccc-ccCCCccccccc
Q 047551            5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDSGPNVSSADEKRLD-DQRSKPGLEKLG   83 (352)
Q Consensus         5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~   83 (352)
                      .+++.+|+.++..+... +..+|.+++.++.+.++++.. ...+.. +...-.++-...+....... ......+....+
T Consensus         2 ~~d~~~~l~i~~~as~~-~i~ka~~~~a~~~hpdk~~~~-~~~~~~-~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~   78 (306)
T KOG0714|consen    2 GKDYYKILGIARSASEE-DIKKAYRKLALKYHPDKNPSP-KEVAEA-KFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGG   78 (306)
T ss_pred             cccHHHHhCccccccHH-HHHHHHHHHHHhhCCCCCCCc-hhhHHH-HHhhhhccccccCCHHHhhhccccCccccccCC
Confidence            56889999999999999 999999999999999997665 222222 11000000000000000000 000000001000


Q ss_pred             CCCCCCCCCCHHHHHHHHHHhcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchh
Q 047551           84 EGLSGERSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDD  163 (352)
Q Consensus        84 ~~~~~~~~~t~~~~~~~~~~~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~  163 (352)
                         .....++.. ...+.....+.+||++||+....+..  .+.|+        |++..++ .+.|..+..+..+|.++ 
T Consensus        79 ---~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~-  142 (306)
T KOG0714|consen   79 ---SFSSSFTSE-LFYFLFRKPDKDFYEFFGVSSPFSGS--KKGYR--------DKNAAPG-EEAFKSEGKAFQSLYGP-  142 (306)
T ss_pred             ---CCCCCCCCC-cceeccCchhhhHHHHhCCCCCCccc--cccCC--------ccccccC-ccccccccccccccCCC-
Confidence               000111111 12233445588999999988776654  44444        7777777 88899999999999999 


Q ss_pred             hhhhhcccCCcchhhccccCCCCCCCcCCCCC--CCCCCCChHHHHHhhhCCCCCCCCccc------ccccCC-cchhhh
Q 047551          164 SRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHD--FFDDELDPDEIFRSFFGQQDMFRTTRV------YRTRGM-RSQERE  234 (352)
Q Consensus       164 kR~~YD~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~pediF~~fFGg~~~f~~~~~------~~~~~~-~~~~r~  234 (352)
                      .|..||..+. ........+        ..+.  .+..++.+...+.++++..........      +..... ++....
T Consensus       143 ~~~~~~~~~~-~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (306)
T KOG0714|consen  143 KRKQYDSSGS-DRSARQSPP--------VEHPLRVSLEDLYKGESKKMKISRQSFTSNGREGSSRSRYLSISIKPGWKEG  213 (306)
T ss_pred             cccccccccc-cccccCCCC--------ccCCcceeHHHhccccceeeecccccccCCcccccCccceeEEeccCCcccc
Confidence            9999999876 221110000        1111  022334444555666543311111111      110000 000000


Q ss_pred             hh---ccCCchHHHHHHHHHHHHHHHHHhcC---CCCCCccccCCCCccceeeccCCCceeeccCCccccccCCCCchhh
Q 047551          235 EF---HGAGLNFVFLLQILPFLLIFLLAYLP---YSEPDYSLHRNFNYQIPRTTEKHGIEFYVKSPASFDENFPHGSSAR  308 (352)
Q Consensus       235 ~~---~~~~~~~~~~~qllpil~l~~~~~~~---~~~P~ysl~~~~~~~~~r~T~~~~v~yyV~~~~~f~~~~~~~~~~~  308 (352)
                      ..   ...+..   -..++|+.+++++...+   +..+.++|..+..+.+.+.+...++.++|..  .+...++...  .
T Consensus       214 ~~~~~~~~~~~---~~~~~p~~~~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~--~~~~~~~~~~--~  286 (306)
T KOG0714|consen  214 TKITFPEEGDE---EPGILPADIEFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPT--LDGRSYSLSI--N  286 (306)
T ss_pred             cceeccccccc---cCCcCcceeEEEEecCCcccccCCCccceecccceeehhhhhcCcceeeec--ccCccccCcc--c
Confidence            00   000000   00056666666554332   4777888876667888889999999999985  5666665432  1


Q ss_pred             HhhHHHHHHHHHHHHHHHH
Q 047551          309 AVIEDNVIKDYRNLLWRYC  327 (352)
Q Consensus       309 ~~lE~~Ve~~y~~~l~~~C  327 (352)
                      ..++..++..|+..+...|
T Consensus       287 ~~~~~~~~~~~~~~~~~~~  305 (306)
T KOG0714|consen  287 KDLIEPGEEDVIPGEGLPC  305 (306)
T ss_pred             ccccCCCceeeecCCCCCC
Confidence            2677777777776655544

>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=96.38  E-value=0.0031  Score=55.50  Aligned_cols=68  Identities=24%  Similarity=0.431  Sum_probs=54.4

Q ss_pred             hcCCCchhhcCcCC--CCCHHHHHHHHHHhhhhhCCCCCCCC------CcHHHHHHHHHHHHhcCchhhhhhhccc
Q 047551          104 KRNKDYYAILGVER--SCSVEEIRKAYRKLSLKVHPDKNKAP------GSEEAFKKVCKAFKCLSDDDSRRHYDHV  171 (352)
Q Consensus       104 ~~~~d~Y~iLgv~~--~a~~~eIkkaYrkla~~~HPDk~~~~------~a~e~f~~I~~Ay~vLsd~~kR~~YD~~  171 (352)
                      ....+||.++|...  ..+++-++.-|.-...++|||+...+      .|.+.-..|++||.+|.||-+|+.|=..
T Consensus         5 ~~~~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yilk   80 (168)
T KOG3192|consen    5 GSPSRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLLK   80 (168)
T ss_pred             chHHHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            34678999998664  45666667688899999999995432      3567789999999999999999999754

>PF07719 TPR_2: Tetratricopeptide repeat; InterPro: IPR013105 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]

Probab=96.38  E-value=0.01  Score=37.68  Aligned_cols=34  Identities=18%  Similarity=0.215  Sum_probs=29.6

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      |+-+..+|..++..|++++|++.+++|++++|+.
T Consensus         1 a~~~~~lg~~~~~~~~~~~A~~~~~~al~l~p~~   34 (34)
T PF07719_consen    1 AEAWYYLGQAYYQLGNYEEAIEYFEKALELDPNN   34 (34)
T ss_dssp             HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTTS
T ss_pred             CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHCcCC
Confidence            4457789999999999999999999999999973

It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. This repeat includes outlying Tetratricopeptide-like repeats (TPR) that are not matched by IPR001440 from INTERPRO.; PDB: 1XNF_B 3Q15_A 4ABN_A 1OUV_A 3U4T_A 3MA5_C 2KCV_A 2KCL_A 2XEV_A 3NF1_A ....

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=96.12  E-value=0.0047  Score=55.51  Aligned_cols=56  Identities=36%  Similarity=0.542  Sum_probs=47.0

Q ss_pred             HhcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC--------cHHHHHHHHHHHHh
Q 047551          103 IKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG--------SEEAFKKVCKAFKC  158 (352)
Q Consensus       103 ~~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~--------a~e~f~~I~~Ay~v  158 (352)
                      .....|.|.+|||...++..+|+++||++....|||+-...+        +.+.++.|++||+.
T Consensus       109 ~~~~~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~  172 (174)
T COG1076         109 QLDREDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYED  172 (174)
T ss_pred             cccchhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHh
Confidence            333479999999999999999999999999999999864333        66778888888874

>PF00515 TPR_1: Tetratricopeptide repeat; InterPro: IPR001440 The tetratrico peptide repeat (TPR) is a structural motif present in a wide range of proteins [, , ]

Probab=96.08  E-value=0.017  Score=36.97  Aligned_cols=33  Identities=18%  Similarity=0.263  Sum_probs=29.4

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551            8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDN   40 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~   40 (352)
                      |.-+..+|..++..|++++|+..+++|++++|+
T Consensus         1 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~   33 (34)
T PF00515_consen    1 AEAYYNLGNAYFQLGDYEEALEYYQRALELDPD   33 (34)
T ss_dssp             HHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT
T ss_pred             CHHHHHHHHHHHHhCCchHHHHHHHHHHHHCcC
Confidence            455788999999999999999999999999997

It mediates protein-protein interactions and the assembly of multiprotein complexes []. The TPR motif consists of 3-16 tandem-repeats of 34 amino acids residues, although individual TPR motifs can be dispersed in the protein sequence. Sequence alignment of the TPR domains reveals a consensus sequence defined by a pattern of small and large amino acids. TPR motifs have been identified in various different organisms, ranging from bacteria to humans. Proteins containing TPRs are involved in a variety of biological processes, such as cell cycle regulation, transcriptional control, mitochondrial and peroxisomal protein transport, neurogenesis and protein folding. The X-ray structure of a domain containing three TPRs from protein phosphatase 5 revealed that TPR adopts a helix-turn-helix arrangement, with adjacent TPR motifs packing in a parallel fashion, resulting in a spiral of repeating anti-parallel alpha-helices []. The two helices are denoted helix A and helix B. The packing angle between helix A and helix B is ~24 degrees; within a single TPR and generates a right-handed superhelical shape. Helix A interacts with helix B and with helix A' of the next TPR. Two protein surfaces are generated: the inner concave surface is contributed to mainly by residue on helices A, and the other surface presents residues from both helices A and B. ; GO: 0005515 protein binding; PDB: 3SF4_C 2LNI_A 1ELW_A 2C0M_A 1FCH_B 3R9A_B 2J9Q_A 2C0L_A 1KT1_A 3FWV_A ....

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=95.70  E-value=0.011  Score=60.94  Aligned_cols=40  Identities=38%  Similarity=0.647  Sum_probs=30.5

Q ss_pred             CCCHHHHHHHHHHhhhhhCCCCCCCCCc--------HHHHHHHHHHHH
Q 047551          118 SCSVEEIRKAYRKLSLKVHPDKNKAPGS--------EEAFKKVCKAFK  157 (352)
Q Consensus       118 ~a~~~eIkkaYrkla~~~HPDk~~~~~a--------~e~f~~I~~Ay~  157 (352)
                      =.+.++|||+|||..|.+||||.+-.++        ++.|-.+.+||.
T Consensus       399 LVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn  446 (453)
T KOG0431|consen  399 LVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWN  446 (453)
T ss_pred             ccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHH
Confidence            3688999999999999999999876553        444555555554

>PF13428 TPR_14: Tetratricopeptide repeat

Probab=95.36  E-value=0.036  Score=38.00  Aligned_cols=32  Identities=16%  Similarity=0.210  Sum_probs=29.5

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .+.+|..++..|++++|++.++++++++|+..
T Consensus         4 ~~~la~~~~~~G~~~~A~~~~~~~l~~~P~~~   35 (44)
T PF13428_consen    4 WLALARAYRRLGQPDEAERLLRRALALDPDDP   35 (44)
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCCH
Confidence            56789999999999999999999999999865

>PF13181 TPR_8: Tetratricopeptide repeat; PDB: 3GW4_B 3MA5_C 2KCV_A 2KCL_A 3FP3_A 3LCA_A 3FP4_A 3FP2_A 1W3B_B 1ELW_A

Probab=94.38  E-value=0.089  Score=33.36  Aligned_cols=33  Identities=21%  Similarity=0.235  Sum_probs=29.4

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551            8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDN   40 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~   40 (352)
                      |.-+..+|..+...||+++|++.+++|++++|+
T Consensus         1 a~~~~~lg~~y~~~~~~~~A~~~~~~a~~~~~~   33 (34)
T PF13181_consen    1 AEAYYNLGKIYEQLGDYEEALEYFEKALELNPD   33 (34)
T ss_dssp             -HHHHHHHHHHHHTTSHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Confidence            345788999999999999999999999999984

...

>PF14853 Fis1_TPR_C: Fis1 C-terminal tetratricopeptide repeat; PDB: 1IYG_A 1PC2_A 1NZN_A 3UUX_C 1Y8M_A 2PQR_A 2PQN_A 3O48_A

Probab=94.34  E-value=0.11  Score=37.70  Aligned_cols=42  Identities=10%  Similarity=0.105  Sum_probs=33.9

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHh
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEK   52 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~   52 (352)
                      .--+|..+++-|++++|+++++.+++++|+.. +..|...++.
T Consensus         4 lY~lAig~ykl~~Y~~A~~~~~~lL~~eP~N~Qa~~L~~~i~~   46 (53)
T PF14853_consen    4 LYYLAIGHYKLGEYEKARRYCDALLEIEPDNRQAQSLKELIED   46 (53)
T ss_dssp             HHHHHHHHHHTT-HHHHHHHHHHHHHHTTS-HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHhhCCCcHHHHHHHHHHHH
Confidence            34578889999999999999999999999876 7777777754

>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A

Probab=94.17  E-value=0.074  Score=39.13  Aligned_cols=36  Identities=17%  Similarity=0.248  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .|+-+..+|..++..|++++|+..+.+|++++|+..
T Consensus         2 ~a~~~~~~g~~~~~~~~~~~A~~~~~~ai~~~p~~~   37 (69)
T PF13414_consen    2 NAEAWYNLGQIYFQQGDYEEAIEYFEKAIELDPNNA   37 (69)
T ss_dssp             SHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHSTTHH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCH
Confidence            477889999999999999999999999999999854

...

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=93.20  E-value=0.16  Score=43.57  Aligned_cols=51  Identities=35%  Similarity=0.356  Sum_probs=39.5

Q ss_pred             hhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchh
Q 047551          110 YAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDD  163 (352)
Q Consensus       110 Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~  163 (352)
                      ..||||++..+.++|.+.|.+|-...+|++.   |..-.-.+|..|.++|...-
T Consensus        61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kG---GSfYLQSKV~rAKErl~~El  111 (127)
T PF03656_consen   61 RQILNVKEELSREEIQKRYKHLFKANDPSKG---GSFYLQSKVFRAKERLEQEL  111 (127)
T ss_dssp             HHHHT--G--SHHHHHHHHHHHHHHT-CCCT---S-HHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCccCHHHHHHHHHHHHhccCCCcC---CCHHHHHHHHHHHHHHHHHH
Confidence            5799999999999999999999999999987   67777788999999987554

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=92.68  E-value=0.071  Score=47.87  Aligned_cols=64  Identities=22%  Similarity=0.375  Sum_probs=48.6

Q ss_pred             chhhcCcCCCC--CHHHHHHHHHHhhhhhCCCCCCCCCcH------HHHHHHHHHHHhcCchhhhhhhcccC
Q 047551          109 YYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSE------EAFKKVCKAFKCLSDDDSRRHYDHVG  172 (352)
Q Consensus       109 ~Y~iLgv~~~a--~~~eIkkaYrkla~~~HPDk~~~~~a~------e~f~~I~~Ay~vLsd~~kR~~YD~~g  172 (352)
                      |....|..+.+  ..+.++..|+.+.+.+|||+....+..      +.+..++.||.+|.||-+|+.|=..-
T Consensus         3 ~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~lal   74 (174)
T COG1076           3 GFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLLAL   74 (174)
T ss_pred             cccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHh
Confidence            34444544432  456788999999999999998765533      45788999999999999999987543

>PF13414 TPR_11: TPR repeat; PDB: 2HO1_B 2FI7_B 2DBA_A 3Q4A_B 2C2L_D 3Q47_B 3Q49_B 2PL2_B 3IEG_B 2FBN_A

Probab=92.36  E-value=0.11  Score=38.18  Aligned_cols=36  Identities=14%  Similarity=0.180  Sum_probs=30.5

Q ss_pred             CHHHHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCC
Q 047551            4 NKDEALRCIRIAEEAIASG-KKQRALKFIKIAQRLND   39 (352)
Q Consensus         4 NkdEA~rc~~iA~~~l~~g-d~~~A~kf~~kA~~L~P   39 (352)
                      |.+.+.-...+|..++..| ++++|++.+++|++++|
T Consensus        33 ~p~~~~~~~~~g~~~~~~~~~~~~A~~~~~~al~l~P   69 (69)
T PF13414_consen   33 DPNNAEAYYNLGLAYMKLGKDYEEAIEDFEKALKLDP   69 (69)
T ss_dssp             STTHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHST
T ss_pred             CCCCHHHHHHHHHHHHHhCccHHHHHHHHHHHHHcCc
Confidence            3445556778888899999 79999999999999998

...

>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A

Probab=91.46  E-value=0.2  Score=36.63  Aligned_cols=38  Identities=13%  Similarity=0.209  Sum_probs=21.7

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-CHHHHHH
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL-SVHEVLA   48 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~-~~~~ll~   48 (352)
                      .+.+|..+++.|++++|+..+.++...+|+. .+..|++
T Consensus        28 ~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~l~a   66 (68)
T PF14559_consen   28 RLLLAQCYLKQGQYDEAEELLERLLKQDPDNPEYQQLLA   66 (68)
T ss_dssp             HHHHHHHHHHTT-HHHHHHHHHCCHGGGTTHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHHCcCHHHHHHHHh
Confidence            4456666666666666666666666666663 2444443

...

>PF13176 TPR_7: Tetratricopeptide repeat; PDB: 3SF4_C 3RO3_A 3RO2_A

Probab=91.37  E-value=0.39  Score=31.41  Aligned_cols=30  Identities=13%  Similarity=0.199  Sum_probs=24.9

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDN   40 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~   40 (352)
                      +..+|..+.+.|++++|+.++++|+.+..+
T Consensus         2 l~~Lg~~~~~~g~~~~Ai~~y~~aL~l~~~   31 (36)
T PF13176_consen    2 LNNLGRIYRQQGDYEKAIEYYEQALALARD   31 (36)
T ss_dssp             HHHHHHHHHHCT-HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHhccc
Confidence            567899999999999999999997766543

>PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A

Probab=90.61  E-value=0.47  Score=29.42  Aligned_cols=31  Identities=13%  Similarity=0.142  Sum_probs=28.3

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      ...+|..+++.|++++|++.+++.++.+|+.
T Consensus         3 ~~~~a~~~~~~g~~~~A~~~~~~~~~~~P~s   33 (33)
T PF13174_consen    3 LYRLARCYYKLGDYDEAIEYFQRLIKRYPDS   33 (33)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHHHHHHSTTS
T ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHHHCcCC
Confidence            5678999999999999999999999999973

>TIGR03504 FimV_Cterm FimV C-terminal domain

Probab=90.53  E-value=0.36  Score=33.79  Aligned_cols=26  Identities=15%  Similarity=0.190  Sum_probs=24.0

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551           12 IRIAEEAIASGKKQRALKFIKIAQRL   37 (352)
Q Consensus        12 ~~iA~~~l~~gd~~~A~kf~~kA~~L   37 (352)
                      +++|+.+++.||.++|+..+++.+.-
T Consensus         3 LdLA~ayie~Gd~e~Ar~lL~evl~~   28 (44)
T TIGR03504         3 LDLARAYIEMGDLEGARELLEEVIEE   28 (44)
T ss_pred             hHHHHHHHHcCChHHHHHHHHHHHHc
Confidence            68899999999999999999999953

This protein is found at the extreme C-terminus of FimV from Pseudomonas aeruginosa, and of TspA of Neisseria meningitidis. Disruption of the former blocks twitching motility from type IV pili; Semmler, et al. suggest a role in peptidoglycan layer remodelling required by type IV fimbrial systems.

>smart00028 TPR Tetratricopeptide repeats

Probab=90.35  E-value=0.56  Score=27.12  Aligned_cols=30  Identities=20%  Similarity=0.316  Sum_probs=27.3

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDN   40 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~   40 (352)
                      +..+|..++..|+++.|+..+.++++++|+
T Consensus         4 ~~~~a~~~~~~~~~~~a~~~~~~~~~~~~~   33 (34)
T smart00028        4 LYNLGNAYLKLGDYDEALEYYEKALELDPN   33 (34)
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHccCCC
Confidence            567788999999999999999999999986

Repeats present in 4 or more copies in proteins. Contain a minimum of 34 amino acids each and self-associate via a "knobs and holes" mechanism.

>KOG0553 consensus TPR repeat-containing protein [General function prediction only]

Probab=89.96  E-value=0.48  Score=46.14  Aligned_cols=41  Identities=17%  Similarity=0.041  Sum_probs=37.8

Q ss_pred             CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHH
Q 047551            4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVH   44 (352)
Q Consensus         4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~   44 (352)
                      ++.+|+++..-..++++.++|..|+..|.+|+.|+|+..+.
T Consensus        77 ~~~~AE~LK~eGN~~m~~~~Y~eAv~kY~~AI~l~P~nAVy  117 (304)
T KOG0553|consen   77 DKALAESLKNEGNKLMKNKDYQEAVDKYTEAIELDPTNAVY  117 (304)
T ss_pred             HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcchH
Confidence            77889999999999999999999999999999999997653

>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B

Probab=89.70  E-value=0.53  Score=34.14  Aligned_cols=38  Identities=13%  Similarity=0.146  Sum_probs=30.1

Q ss_pred             HHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551           13 RIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC   50 (352)
Q Consensus        13 ~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~   50 (352)
                      ..|..+++.|++++|++.++++++.+|... +..++..|
T Consensus         2 ~~a~~~~~~g~~~~A~~~~~~~l~~~P~~~~a~~~lg~~   40 (65)
T PF13432_consen    2 ALARALYQQGDYDEAIAAFEQALKQDPDNPEAWYLLGRI   40 (65)
T ss_dssp             HHHHHHHHCTHHHHHHHHHHHHHCCSTTHHHHHHHHHHH
T ss_pred             hHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence            578899999999999999999999999743 44444444

>PF13432 TPR_16: Tetratricopeptide repeat; PDB: 3CVP_A 3CVL_A 3CVQ_A 3CV0_A 2GW1_B 3CVN_A 3QKY_A 2PL2_B

Probab=89.24  E-value=0.79  Score=33.18  Aligned_cols=35  Identities=14%  Similarity=0.160  Sum_probs=28.7

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      .+.-...+|..++..|++++|+..++++++++|+.
T Consensus        30 ~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~P~~   64 (65)
T PF13432_consen   30 NPEAWYLLGRILYQQGRYDEALAYYERALELDPDN   64 (65)
T ss_dssp             HHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHSTT-
T ss_pred             CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC
Confidence            34446677888999999999999999999999984

>PF14559 TPR_19: Tetratricopeptide repeat; PDB: 2R5S_A 3QDN_B 3QOU_A 3ASG_A 3ASD_A 3AS5_A 3AS4_A 3ASH_B 3FP3_A 3LCA_A

Probab=85.87  E-value=1.2  Score=32.38  Aligned_cols=33  Identities=21%  Similarity=0.387  Sum_probs=26.1

Q ss_pred             HHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551           18 AIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC   50 (352)
Q Consensus        18 ~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~   50 (352)
                      +++.|++++|++.+++++..+|+.. +.-.+..|
T Consensus         1 ll~~~~~~~A~~~~~~~l~~~p~~~~~~~~la~~   34 (68)
T PF14559_consen    1 LLKQGDYDEAIELLEKALQRNPDNPEARLLLAQC   34 (68)
T ss_dssp             HHHTTHHHHHHHHHHHHHHHTTTSHHHHHHHHHH
T ss_pred             ChhccCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence            4789999999999999999999854 44444443

...

>PF14863 Alkyl_sulf_dimr: Alkyl sulfatase dimerisation; PDB: 2YHE_C 2CG2_A 2CG3_A 2CFU_A 2CFZ_A

Probab=84.76  E-value=2.5  Score=36.89  Aligned_cols=42  Identities=19%  Similarity=0.195  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHH
Q 047551            8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAA   49 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~   49 (352)
                      +.+.++.|++++.+||+.-|..+++.++..+|+.. ++.|...
T Consensus        70 ~d~vl~~A~~~~~~gd~~wA~~L~d~l~~adp~n~~ar~l~A~  112 (141)
T PF14863_consen   70 ADKVLERAQAALAAGDYQWAAELLDHLVFADPDNEEARQLKAD  112 (141)
T ss_dssp             HHHHHHHHHHHHHCT-HHHHHHHHHHHHHH-TT-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence            35688899999999999999999999999999865 6665553

>PF13371 TPR_9: Tetratricopeptide repeat

Probab=84.52  E-value=1.9  Score=31.71  Aligned_cols=24  Identities=17%  Similarity=0.221  Sum_probs=12.5

Q ss_pred             HHHHcCCHHHHHHHHHHHHhhCCC
Q 047551           17 EAIASGKKQRALKFIKIAQRLNDN   40 (352)
Q Consensus        17 ~~l~~gd~~~A~kf~~kA~~L~P~   40 (352)
                      .++..+|+++|++.+++++.++|+
T Consensus         4 ~~~~~~~~~~A~~~~~~~l~~~p~   27 (73)
T PF13371_consen    4 IYLQQEDYEEALEVLERALELDPD   27 (73)
T ss_pred             HHHhCCCHHHHHHHHHHHHHhCcc
Confidence            344555555555555555555554

>PF13374 TPR_10: Tetratricopeptide repeat; PDB: 3CEQ_B 3EDT_H 3NF1_A

Probab=81.76  E-value=3.7  Score=26.46  Aligned_cols=32  Identities=19%  Similarity=0.261  Sum_probs=25.4

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551            9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDN   40 (352)
Q Consensus         9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~   40 (352)
                      .-+-.+|..+...|++++|++++++|+.+.-.
T Consensus         3 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~   34 (42)
T PF13374_consen    3 SALNNLANAYRAQGRYEEALELLEEALEIRER   34 (42)
T ss_dssp             HHHHHHHHHHHHCT-HHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHhhhhcchhhHHHHHHHHHHHH
Confidence            34667899999999999999999999987543

>PRK10370 formate-dependent nitrite reductase complex subunit NrfG; Provisional

Probab=81.58  E-value=13  Score=33.70  Aligned_cols=39  Identities=15%  Similarity=0.084  Sum_probs=33.7

Q ss_pred             CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      |-+.++-+..++..++..|+++.|+..+.+|++++|+..
T Consensus        69 ~P~~~~~w~~Lg~~~~~~g~~~~A~~a~~~Al~l~P~~~  107 (198)
T PRK10370         69 NPQNSEQWALLGEYYLWRNDYDNALLAYRQALQLRGENA  107 (198)
T ss_pred             CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCH
Confidence            334566788999999999999999999999999999854

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=80.77  E-value=8.5  Score=38.76  Aligned_cols=39  Identities=18%  Similarity=0.238  Sum_probs=37.0

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      +|+.|+++-+++..+.+..|++..|+..+.+|+.++|+.
T Consensus        33 ~~~advekhlElGk~lla~~Q~sDALt~yHaAve~dp~~   71 (504)
T KOG0624|consen   33 ASPADVEKHLELGKELLARGQLSDALTHYHAAVEGDPNN   71 (504)
T ss_pred             CCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCchh
Confidence            578899999999999999999999999999999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	352
2ctp_A	78	Solution Structure Of J-Domain From Human Dnaj Subf		4e-16
1hdj_A	77	Human Hsp40 (Hdj-1), Nmr Length = 77		1e-13
2cug_A	88	Solution Structure Of The J Domain Of The Pseudo Dn		2e-13
2ctr_A	88	Solution Structure Of J-Domain From Human Dnaj Subf		4e-13
2ys8_A	90	Solution Structure Of The Dnaj-Like Domain From Hum		2e-12
3lz8_A	329	Structure Of A Putative Chaperone Dnaj From Klebsie		4e-12
2och_A	73	J-domain Of Dnj-12 From Caenorhabditis Elegans Leng		2e-11
2kqx_A	73	Nmr Structure Of The J-Domain (Residues 2-72) In Th		3e-11
1bqz_A	77	J-Domain (Residues 1-77) Of The Escherichia Coli N-		6e-11
3apo_A	780	Crystal Structure Of Full-Length Erdj5 Length = 780		6e-11
2dn9_A	79	Solution Structure Of J-Domain From The Dnaj Homolo		6e-11
1bq0_A	103	J-Domain (Residues 1-77) Of The Escherichia Coli N-		7e-11
1xbl_A	107	Nmr Structure Of The J-Domain (Residues 2-76) In Th		7e-11
3apq_A	210	Crystal Structure Of J-Trx1 Fragment Of Erdj5 Lengt		1e-10
2dmx_A	92	Solution Structure Of The J Domain Of Dnaj Homolog		2e-10
2ej7_A	82	Solution Structure Of The Dnaj Domain Of The Human		4e-10
2lo1_A	71	Nmr Structure Of The Protein Bc008182, A Dnaj-Like		1e-09
2o37_A	92	J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From S		6e-09
2lgw_A	99	Solution Structure Of The J Domain Of Hsj1a Length		1e-08
2ctw_A	109	Solution Structure Of J-Domain From Mouse Dnaj Subf		6e-08
2ctq_A	112	Solution Structure Of J-Domain From Human Dnaj Subf		3e-07
2y4u_A	450	Crystal Structure Of Human P58(Ipk) In Space Group		2e-06
2y4t_A	450	Crystal Structure Of The Human Co-Chaperone P58(Ipk		2e-06
2l6l_A	155	Solution Structure Of Human J-Protein Co-Chaperone,		1e-05
1wjz_A	94	Soluiotn Structure Of J-Domain Of Mouse Dnaj Like P		2e-05

>pdb|2CTP|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 12 Length = 78

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 36/67 (53%), Positives = 48/67 (71%)
Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR 165
           + DYY ILGV R  S E+++KAYR+L+LK HPDKN APG+ EAFK +  A+  LS+ + R
Sbjct: 6   SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKR 65
Query: 166 RHYDHVG 172
           + YD  G
Sbjct: 66  KQYDQFG 72

>pdb|1HDJ|A Chain A, Human Hsp40 (Hdj-1), Nmr Length = 77

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR 165
            KDYY  LG+ R  S EEI++AYR+ +L+ HPDKNK PG+EE FK++ +A+  LSD   R
Sbjct: 2   GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKR 61
Query: 166 RHYDHVG 172
             +D  G
Sbjct: 62  EIFDRYG 68

>pdb|2CUG|A Chain A, Solution Structure Of The J Domain Of The Pseudo Dnaj Protein, Mouse Hypothetical Mkiaa0962 Length = 88

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 49/65 (75%)
Query: 108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRH 167
           D Y +LGV R+ S  +I+KAY+KL+ + HPDKNK PG+E+ F ++ KA++ LS+++ R +
Sbjct: 18  DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTN 77
Query: 168 YDHVG 172
           YDH G
Sbjct: 78  YDHYG 82

>pdb|2CTR|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily B Menber 9 Length = 88

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 109 YYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHY 168
           YY ILGV +S S  +I+KA+ KL++K HPDKNK+P +E  F+++ +A++ LSD + R+ Y
Sbjct: 9   YYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEY 68
Query: 169 DHVG 172
           D +G
Sbjct: 69  DTLG 72

>pdb|2YS8|A Chain A, Solution Structure Of The Dnaj-Like Domain From Human Ras- Associated Protein Rap1 Length = 90

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/68 (48%), Positives = 48/68 (70%)
Query: 92  YTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKK 151
           +T+E  + IR+I+ +KD + +LGV+   S +E+ KAYRKL++ +HPDK  APGSE+AFK 
Sbjct: 12  FTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKA 71
Query: 152 VCKAFKCL 159
           V  A   L
Sbjct: 72  VVNARTAL 79

>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A Resolution. Length = 329

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 7/108 (6%)
Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           KDYYAILGV+ +  ++ I+ AYR+L+ K HPD +K   +E  FK + +A++ L D+  R 
Sbjct: 28  KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRA 87
Query: 167 HYDHVGLVDEFEHNQRHNVXXXXXXAQHDFFDDELDPDEIFRSFFGQQ 214
            YD +     ++H  R++         H+    + D D+IF S FGQQ
Sbjct: 88  EYDQL-----WQH--RNDPGFGRQRQTHEQSYSQQDFDDIFSSMFGQQ 128

>pdb|2OCH|A Chain A, J-domain Of Dnj-12 From Caenorhabditis Elegans Length = 73

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 109 YYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHY 168
           YY +LGV+   S  E++KAYRK++LK HPDKN  P   E FK++ +A++ LSD+  R+ Y
Sbjct: 10  YYDVLGVKPDASDNELKKAYRKMALKFHPDKN--PDGAEQFKQISQAYEVLSDEKKRQIY 67
Query: 169 DHVG 172
           D  G
Sbjct: 68  DQGG 71

>pdb|2KQX|A Chain A, Nmr Structure Of The J-Domain (Residues 2-72) In The Escherichia Coli Cbpa Length = 73

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           KDYYAI+GV+ +  ++ I+ AYR+L+ K HPD +K P +E  FK+V +A++ LSD+  R 
Sbjct: 5   KDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDEQRRA 64
Query: 167 HYDHV 171
            YD +
Sbjct: 65  EYDQM 69

>pdb|1BQZ|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-78) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 77

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA-FKKVCKAFKCLSDDDS 164
            +DYY ILGV ++    EIRKAY++L++K HPD+N+     EA FK++ +A++ L+D   
Sbjct: 2   KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQK 61
Query: 165 RRHYDHVG 172
           R  YD  G
Sbjct: 62  RAAYDQYG 69

>pdb|3APO|A Chain A, Crystal Structure Of Full-Length Erdj5 Length = 780

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 29/70 (41%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 104 KRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGSEEAFKKVCKAFKCLSDD 162
           + ++++Y++LGV ++ S  EIR+A++KL+LK+HPDKN   P +   F K+ +A++ L D+
Sbjct: 18  RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDE 77
Query: 163 DSRRHYDHVG 172
           D R+ YD  G
Sbjct: 78  DLRKKYDKYG 87

>pdb|2DN9|A Chain A, Solution Structure Of J-Domain From The Dnaj Homolog, Human Tid1 Protein Length = 79

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRR 166
           DYY ILGV R+ S +EI+KAY +L+ K HPD NK  P ++E F ++ +A++ LSD+  R+
Sbjct: 8   DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRK 67
Query: 167 HYDHVG 172
            YD  G
Sbjct: 68  QYDAYG 73

>pdb|1BQ0|A Chain A, J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj, Nmr, 20 Structures Length = 103

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA-FKKVCKAFKCLSDDDSR 165
           +DYY ILGV ++    EIRKAY++L++K HPD+N+     EA FK++ +A++ L+D   R
Sbjct: 3   QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKR 62
Query: 166 RHYDHVG 172
             YD  G
Sbjct: 63  AAYDQYG 69

>pdb|1XBL|A Chain A, Nmr Structure Of The J-Domain (Residues 2-76) In The Escherichia Coli N-Terminal Fragment (Residues 2-108) Of The Molecular Chaperone Dnaj, 20 Structures Length = 107

Iteration: 1
 Score = 64.7 bits (156), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA-FKKVCKAFKCLSDDDSR 165
           +DYY ILGV ++    EIRKAY++L++K HPD+N+     EA FK++ +A++ L+D   R
Sbjct: 3   QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKR 62
Query: 166 RHYDHVG 172
             YD  G
Sbjct: 63  AAYDQYG 69

>pdb|3APQ|A Chain A, Crystal Structure Of J-Trx1 Fragment Of Erdj5 Length = 210

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGSEEAFKKVCKAFKCLSDDDSR 165
           +++Y++LGV ++ S  EIR+A++KL+LK+HPDKN   P +   F K+ +A++ L D+D R
Sbjct: 2   QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 61
Query: 166 RHYDHVG 172
           + YD  G
Sbjct: 62  KKYDKYG 68

>pdb|2DMX|A Chain A, Solution Structure Of The J Domain Of Dnaj Homolog Subfamily B Member 8 Length = 92

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/67 (49%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDSR 165
           +YY +LGV+ S S E+I+KAYRKL+L+ HPDKN      +E+ FK V +A++ LSD   R
Sbjct: 10  NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKR 69
Query: 166 RHYDHVG 172
             YD  G
Sbjct: 70  SLYDRAG 76

>pdb|2EJ7|A Chain A, Solution Structure Of The Dnaj Domain Of The Human Protein Hcg3, A Hypothetical Protein Tmp_locus_21 Length = 82

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 36/68 (52%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 108 DYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA---FKKVCKAFKCLSDDDS 164
           DYY +L V R  S E I+KAYRKL+LK HPDKN     EEA   FK+V +A++ LSD   
Sbjct: 10  DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPE-NKEEAERRFKQVAEAYEVLSDAKK 68
Query: 165 RRHYDHVG 172
           R  YD  G
Sbjct: 69  RDIYDRYG 76

>pdb|2LO1|A Chain A, Nmr Structure Of The Protein Bc008182, A Dnaj-Like Domain From Homo Sapiens Length = 71

Iteration: 1
 Score = 60.5 bits (145), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/68 (47%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDS 164
           +   YY +LGV+ + + EE++KAYRKL+LK HPDKN  P   E FK++ +A++ LSD   
Sbjct: 4   KETTYYDVLGVKPNATQEELKKAYRKLALKYHPDKN--PNEGEKFKQISQAYEVLSDAKK 61
Query: 165 RRHYDHVG 172
           R  YD  G
Sbjct: 62  RELYDKGG 69

>pdb|2O37|A Chain A, J-Domain Of Sis1 Protein, Hsp40 Co-Chaperone From Saccharomyces Cerevisiae Length = 92

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 110 YAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYD 169
           Y +LGV  S + +E++K YRK +LK HPD  K  G  E FK++ +AF+ L+D   R  YD
Sbjct: 11  YDLLGVSPSANEQELKKGYRKAALKYHPD--KPTGDTEKFKEISEAFEILNDPQKREIYD 68
Query: 170 HVGL 173
             GL
Sbjct: 69  QYGL 72

>pdb|2LGW|A Chain A, Solution Structure Of The J Domain Of Hsj1a Length = 99

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 109 YYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDSRR 166
           YY IL V RS S ++I+KAYR+ +L+ HPDKN      +E+ FK+V +A++ LSD   R 
Sbjct: 4   YYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKRE 63
Query: 167 HYDHVG 172
            YD  G
Sbjct: 64  IYDRYG 69

>pdb|2CTW|A Chain A, Solution Structure Of J-Domain From Mouse Dnaj Subfamily C Menber 5 Length = 109

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 110 YAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHY 168
           Y +LG++++ + ++I+K+YRKL+LK HPDKN   P + + FK++  A   L+D   R  Y
Sbjct: 20  YHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIY 79
Query: 169 DHVG 172
           D  G
Sbjct: 80  DKYG 83

>pdb|2CTQ|A Chain A, Solution Structure Of J-Domain From Human Dnaj Subfamily C Menber 12 Length = 112

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGSEEAFKKVCKAFKCLSDDDS 164
            +DYY +LG +   SVE+I   ++  +L+ HPDK+ + P + E F+K+ KA + L++++S
Sbjct: 19  TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEES 78
Query: 165 RRHYDH 170
           R  YDH
Sbjct: 79  RARYDH 84

>pdb|2Y4U|A Chain A, Crystal Structure Of Human P58(Ipk) In Space Group P312 Length = 450

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 90  RSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPD----KNKAPGS 145
           R   E+   L++Q ++ +DYY ILGV+R+   +EI KAYRKL+L+ HPD    + +   +
Sbjct: 366 REGLEKAQRLLKQSQK-RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKA 424
Query: 146 EEAFKKVCKAFKCLSDDDSRRHYD 169
           E+ F  +  A + LSD + R+ +D
Sbjct: 425 EKKFIDIAAAKEVLSDPEXRKKFD 448

>pdb|2Y4T|A Chain A, Crystal Structure Of The Human Co-Chaperone P58(Ipk) Length = 450

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 90  RSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPD----KNKAPGS 145
           R   E+   L++Q ++ +DYY ILGV+R+   +EI KAYRKL+L+ HPD    + +   +
Sbjct: 366 REGLEKAQRLLKQSQK-RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKA 424
Query: 146 EEAFKKVCKAFKCLSDDDSRRHYD 169
           E+ F  +  A + LSD + R+ +D
Sbjct: 425 EKKFIDIAAAKEVLSDPEMRKKFD 448

>pdb|2L6L|A Chain A, Solution Structure Of Human J-Protein Co-Chaperone, Dph4 Length = 155

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK----APGSEEAFKK---VCKAFKCL 159
           KD+Y+ILG + S ++ ++++ Y+KL L  HPDK      A   EE  +K   + +A+K L
Sbjct: 10  KDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKIL 69
Query: 160 SDDDSRRHYD 169
            +++++R YD
Sbjct: 70  GNEETKREYD 79

>pdb|1WJZ|A Chain A, Soluiotn Structure Of J-Domain Of Mouse Dnaj Like Protein Length = 94

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA---PGSEE----AFKKVCKAFKCL 159
           KD+Y+ILG + S ++ ++++ Y+KL L  HPDK  A    G+ E     F ++ +A+K L
Sbjct: 16  KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKIL 75
Query: 160 SDDDSRRHYD 169
            ++++++ YD
Sbjct: 76  GNEETKKKYD 85

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	352
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	3e-37
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	5e-28
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	3e-26
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	1e-25
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	2e-25
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	4e-24
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	7e-24
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	2e-23
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	8e-23
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	8e-23
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	1e-22
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	3e-22
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	5e-22
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	5e-22
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	6e-22
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	6e-22
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	7e-22
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	9e-22
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	2e-21
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	3e-21
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	8e-21
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	1e-20
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	2e-20
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	9e-16
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	6e-14
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	8e-14
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	9e-12
2guz_A	71	Mitochondrial import inner membrane translocase su	2e-11
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	3e-11
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	4e-11
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	9e-09
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	1e-08
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-07
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	4e-05

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score =  128 bits (323), Expect = 3e-37
 Identities = 34/83 (40%), Positives = 50/83 (60%)

Query: 87  SGERSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSE 146
               S+T+E  + IR+I+ +KD + +LGV+   S +E+ KAYRKL++ +HPDK  APGSE
Sbjct: 7   GSSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSE 66

Query: 147 EAFKKVCKAFKCLSDDDSRRHYD 169
           +AFK V  A   L  +       
Sbjct: 67  DAFKAVVNARTALLKNIKSGPSS 89

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A Length = 329

 Score =  110 bits (278), Expect = 5e-28
 Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 8/121 (6%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           KDYYAILGV+ +  ++ I+ AYR+L+ K HPD +K   +E  FK + +A++ L D+  R 
Sbjct: 28  KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRA 87

Query: 167 HYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFRTTRVYRTR 226
            Y      D+   ++      R+R+     +  + D D+IF S FGQQ   +  R +  R
Sbjct: 88  EY------DQLWQHRNDPGFGRQRQTHEQSYSQQ-DFDDIFSSMFGQQ-AHQRRRQHAAR 139

Query: 227 G 227
           G
Sbjct: 140 G 140

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 77

 Score = 98.8 bits (247), Expect = 3e-26
 Identities = 34/66 (51%), Positives = 46/66 (69%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           KDYY  LG+ R  S EEI++AYR+ +L+ HPDKNK PG+EE FK++ +A+  LSD   R 
Sbjct: 3   KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE 62

Query: 167 HYDHVG 172
            +D  G
Sbjct: 63  IFDRYG 68

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 96.9 bits (242), Expect = 1e-25
 Identities = 36/67 (53%), Positives = 48/67 (71%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR 165
           + DYY ILGV R  S E+++KAYR+L+LK HPDKN APG+ EAFK +  A+  LS+ + R
Sbjct: 6   SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKR 65

Query: 166 RHYDHVG 172
           + YD  G
Sbjct: 66  KQYDQFG 72

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus} Length = 88

 Score = 97.4 bits (243), Expect = 2e-25
 Identities = 32/67 (47%), Positives = 50/67 (74%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR 165
           + D Y +LGV R+ S  +I+KAY+KL+ + HPDKNK PG+E+ F ++ KA++ LS+++ R
Sbjct: 16  DFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKR 75

Query: 166 RHYDHVG 172
            +YDH G
Sbjct: 76  TNYDHYG 82

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus} Length = 210

 Score = 97.2 bits (242), Expect = 4e-24
 Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 7/113 (6%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSR 165
           +++Y++LGV ++ S  EIR+A++KL+LK+HPDKN   P +   F K+ +A++ L D+D R
Sbjct: 2   QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLR 61

Query: 166 RHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMFR 218
           + YD  G           + +  +  +   +  D    D+       ++  F 
Sbjct: 62  KKYDKYG------EKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFD 108

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 92.8 bits (231), Expect = 7e-24
 Identities = 31/66 (46%), Positives = 48/66 (72%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
             YY ILGV +S S  +I+KA+ KL++K HPDKNK+P +E  F+++ +A++ LSD + R+
Sbjct: 7   GSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRK 66

Query: 167 HYDHVG 172
            YD +G
Sbjct: 67  EYDTLG 72

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score = 94.1 bits (234), Expect = 2e-23
 Identities = 27/112 (24%), Positives = 55/112 (49%), Gaps = 16/112 (14%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-------APGSEEAFKKVCKAFKCL 159
           KD+Y+ILG + S ++ ++++ Y+KL L  HPDK              + F ++ +A+K L
Sbjct: 10  KDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKIL 69

Query: 160 SDDDSRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFF 211
            +++++R YD     D+  +    +            + +E+  +E   SF+
Sbjct: 70  GNEETKREYDLQRCEDDLRNVGPVD---------AQVYLEEMSWNEGDHSFY 112

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A Length = 73

 Score = 89.6 bits (223), Expect = 8e-23
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
             YY +LGV+   S  E++KAYRK++LK HPDKN  P   E FK++ +A++ LSD+  R+
Sbjct: 8   TGYYDVLGVKPDASDNELKKAYRKMALKFHPDKN--PDGAEQFKQISQAYEVLSDEKKRQ 65

Query: 167 HYDHVG 172
            YD  G
Sbjct: 66  IYDQGG 71

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae} Length = 92

 Score = 90.1 bits (224), Expect = 8e-23
 Identities = 28/67 (41%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR 165
               Y +LGV  S + +E++K YRK +LK HPDK    G  E FK++ +AF+ L+D   R
Sbjct: 7   ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKP--TGDTEKFKEISEAFEILNDPQKR 64

Query: 166 RHYDHVG 172
             YD  G
Sbjct: 65  EIYDQYG 71

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 112

 Score = 90.6 bits (225), Expect = 1e-22
 Identities = 28/86 (32%), Positives = 48/86 (55%), Gaps = 1/86 (1%)

Query: 88  GERSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSE 146
           G    +     L  + +  +DYY +LG +   SVE+I   ++  +L+ HPDK+   P + 
Sbjct: 1   GSSGSSGMDAILNYRSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAV 60

Query: 147 EAFKKVCKAFKCLSDDDSRRHYDHVG 172
           E F+K+ KA + L++++SR  YDH  
Sbjct: 61  ETFQKLQKAKEILTNEESRARYDHWR 86

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A Length = 103

 Score = 88.8 bits (221), Expect = 3e-22
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 14/112 (12%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSR 165
           +DYY ILGV ++    EIRKAY++L++K HPD+N+    +E  FK++ +A++ L+D   R
Sbjct: 3   QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKR 62

Query: 166 RHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQQDMF 217
             YD  G    FE                  F    D  +IF   FG  D+F
Sbjct: 63  AAYDQYG-HAAFEQGG----------MGGGGFGGGADFSDIFGDVFG--DIF 101

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 82

 Score = 87.7 bits (218), Expect = 5e-22
 Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 2/68 (2%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK--APGSEEAFKKVCKAFKCLSDDDS 164
            DYY +L V R  S E I+KAYRKL+LK HPDKN      +E  FK+V +A++ LSD   
Sbjct: 9   VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKK 68

Query: 165 RRHYDHVG 172
           R  YD  G
Sbjct: 69  RDIYDRYG 76

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 79

 Score = 87.3 bits (217), Expect = 5e-22
 Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSR 165
            DYY ILGV R+ S +EI+KAY +L+ K HPD NK  P ++E F ++ +A++ LSD+  R
Sbjct: 7   GDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKR 66

Query: 166 RHYDHVG 172
           + YD  G
Sbjct: 67  KQYDAYG 73

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus} Length = 109

 Score = 88.2 bits (219), Expect = 6e-22
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSR 165
           +  Y +LG++++ + ++I+K+YRKL+LK HPDKN   P + + FK++  A   L+D   R
Sbjct: 17  ESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKR 76

Query: 166 RHYDHVG 172
             YD  G
Sbjct: 77  NIYDKYG 83

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1 Length = 94

 Score = 87.9 bits (218), Expect = 6e-22
 Identities = 21/73 (28%), Positives = 42/73 (57%), Gaps = 7/73 (9%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-------APGSEEAFKKVCKAFKCL 159
           KD+Y+ILG + S ++ ++++ Y+KL L  HPDK              + F ++ +A+K L
Sbjct: 16  KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKIL 75

Query: 160 SDDDSRRHYDHVG 172
            ++++++ YD   
Sbjct: 76  GNEETKKKYDLQR 88

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 92

 Score = 87.7 bits (218), Expect = 7e-22
 Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 2/68 (2%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK--APGSEEAFKKVCKAFKCLSDDDS 164
            +YY +LGV+ S S E+I+KAYRKL+L+ HPDKN      +E+ FK V +A++ LSD   
Sbjct: 9   ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKK 68

Query: 165 RRHYDHVG 172
           R  YD  G
Sbjct: 69  RSLYDRAG 76

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 99

 Score = 87.5 bits (217), Expect = 9e-22
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSR 165
              Y +LGV  + +  +I+ AY +     HPD+N     + E F ++ +A+  L     R
Sbjct: 17  TALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLR 76

Query: 166 RHYDHVGLVDE 176
           R YD   L DE
Sbjct: 77  RKYDRGLLSDE 87

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans} Length = 109

 Score = 87.1 bits (216), Expect = 2e-21
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 107 KDYYAILGVER-SCSVEEIRKAYRKLSLKVHPDKNKAP----GSEEAFKKVCKAFKCLSD 161
           ++ Y +L V R     +++ KAYR L+ K HPD+ K       +EE F+ +  A++ L D
Sbjct: 15  ENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKD 74

Query: 162 DDSRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHD 195
           D+++ +YD+    D  +    +  +  R RA   
Sbjct: 75  DEAKTNYDYYL--DHPDQRFYNYYQYYRLRAAPK 106

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens} Length = 99

 Score = 86.2 bits (214), Expect = 3e-21
 Identities = 31/68 (45%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK--APGSEEAFKKVCKAFKCLSDDDS 164
             YY IL V RS S ++I+KAYR+ +L+ HPDKN      +E+ FK+V +A++ LSD   
Sbjct: 2   ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHK 61

Query: 165 RRHYDHVG 172
           R  YD  G
Sbjct: 62  REIYDRYG 69

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 85.6 bits (212), Expect = 8e-21
 Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 6/108 (5%)

Query: 104 KRNKDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSD 161
           + +     +LG+ERS   ++  +RKAY K   + HPDK    G EE  KK+   +K + D
Sbjct: 5   EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG---GDEEKMKKMNTLYKKMED 61

Query: 162 DDSRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRS 209
                H    G   +      +       +  + F ++ L   E   S
Sbjct: 62  GVKYAHQPDFGGFWDATEIPTYG-TDEWEQWWNAFNEENLFCSEEMPS 108

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 86.5 bits (214), Expect = 1e-20
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)

Query: 106 NKDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDD 163
           +     +LG+ERS   ++  +RKAY K   + HPDK    G EE  KK+   +K + D  
Sbjct: 10  SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKG---GDEEKMKKMNTLYKKMEDGV 66

Query: 164 SRRHYDHVG 172
              H    G
Sbjct: 67  KYAHQPDFG 75

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score = 91.4 bits (226), Expect = 2e-20
 Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 1/109 (0%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN-KAPGSEEAFKKVCKAFKCLSDDDS 164
           ++++Y++LGV ++ S  EIR+A++KL+LK+HPDKN   P +   F K+ +A++ L D+D 
Sbjct: 20  DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDL 79

Query: 165 RRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRSFFGQ 213
           R+ YD  G     ++           R     +DD+ +   + R  F  
Sbjct: 80  RKKYDKYGEKGLEDNQGGQYESWSYYRYDFGIYDDDPEIITLERREFDA 128

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1 Length = 88

 Score = 70.9 bits (174), Expect = 9e-16
 Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 5/68 (7%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKN--KAPGSEEAFKKVCKAFKCLSDDDS 164
           K+  +++         E +K  R+L LK HPDKN      + E FK +      L     
Sbjct: 16  KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK--- 72

Query: 165 RRHYDHVG 172
           +   D   
Sbjct: 73  QAFLDQNA 80

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A Length = 450

 Score = 71.6 bits (176), Expect = 6e-14
 Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 4/79 (5%)

Query: 95  EHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG----SEEAFK 150
           E  + + +  + +DYY ILGV+R+   +EI KAYRKL+L+ HPD  +       +E+ F 
Sbjct: 370 EKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFI 429

Query: 151 KVCKAFKCLSDDDSRRHYD 169
            +  A + LSD + R+ +D
Sbjct: 430 DIAAAKEVLSDPEMRKKFD 448

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 65.0 bits (158), Expect = 8e-14
 Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 104 KRNKDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSD 161
              +    +L + R        +++AY++ SL +HPDK    GS    +++   +     
Sbjct: 8   ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLWGTFKT 64

Query: 162 DDSRRHYD 169
           +      +
Sbjct: 65  EVYNLRMN 72

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score = 57.8 bits (140), Expect = 2e-11
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 107 KDYYAILGVERSC-SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR 165
           K+   IL +  +  + +++++ +RK+ L  HPDK    GS     K+ +A   L      
Sbjct: 14  KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGIS 70

Query: 166 R 166
           +
Sbjct: 71  K 71

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1 Length = 171

 Score = 60.4 bits (146), Expect = 3e-11
 Identities = 13/71 (18%), Positives = 27/71 (38%), Gaps = 8/71 (11%)

Query: 108 DYYAILGVERSCSV--EEIRKAYRKLSLKVHPDKNKAPGSEE------AFKKVCKAFKCL 159
           DY+ + G+     +  + +   ++ L  + HPDK  +    E          + +A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 160 SDDDSRRHYDH 170
                R  Y  
Sbjct: 62  RHPLMRAEYLL 72

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A Length = 181

 Score = 60.4 bits (146), Expect = 4e-11
 Identities = 16/76 (21%), Positives = 25/76 (32%), Gaps = 9/76 (11%)

Query: 102 QIKRNKDYYAILGVERSC-------SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCK 154
           Q +    +Y +                  +RK YR+L  + HPD        E    + +
Sbjct: 6   QRRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMA--QQGSEQSSTLNQ 63

Query: 155 AFKCLSDDDSRRHYDH 170
           A+  L D   R  Y  
Sbjct: 64  AYHTLKDPLRRSQYML 79

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score = 51.5 bits (123), Expect = 9e-09
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 100 IRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVC-KAFKC 158
           ++ I  +   +  + +        +RK+Y++  L +HPDK +  G+    K +  K F+ 
Sbjct: 33  LQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFEL 92

Query: 159 LSD 161
           L +
Sbjct: 93  LQE 95

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 52.9 bits (126), Expect = 1e-08
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGS----EEAFKKVCKAFKCLSD 161
            +  +  +G+    + E+++K YRK  L VHPDK          +  F ++  A+    +
Sbjct: 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 175

Query: 162 DDSRRHY 168
              +  Y
Sbjct: 176 QGQKPLY 182

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens} Length = 207

 Score = 53.2 bits (127), Expect = 2e-08
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 100 IRQIKRNKDYYAILGVERSCSV--EEIRKAYRKLSLKVHPDKNKAPGSEEA------FKK 151
           ++     +DY++++   RS  V   +++  Y++L   VHPD        E          
Sbjct: 36  LQAPDPTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTL 95

Query: 152 VCKAFKCLSDDDSRRHYD 169
           V  A+K L    SR  Y 
Sbjct: 96  VNDAYKTLLAPLSRGLYL 113

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.0 bits (121), Expect = 4e-07
 Identities = 58/413 (14%), Positives = 119/413 (28%), Gaps = 103/413 (24%)

Query: 26  RALKFIKIAQRL-----NDNLSVH-------EVLAA--CEKLGVGDSGPN----VSSADE 67
           R   ++K+ Q L       N+ +          +A   C    V          ++  + 
Sbjct: 133 RLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNC 192

Query: 68  KRLDDQ---------RSKPGLEKLGEGLSGERSYTEEHVELIRQIKRNKDY---YAIL-G 114
              +           +  P      +  S  +         +R++ ++K Y     +L  
Sbjct: 193 NSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN 252

Query: 115 VE------------------RSCSVEEIRKA--YRKLSLKVHPDKNKAPGSEEAFKKV-- 152
           V+                  R   V +   A     +SL  H         +    K   
Sbjct: 253 VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLD 312

Query: 153 CKAFKCLSDDDSRRHYDHVGLVDEFEHNQ-------RHNVRPRRRRAQHDFFDDELDPDE 205
           C+  + L  +    +   + ++ E   +        +H    +         +  L+P E
Sbjct: 313 CRP-QDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLN-VLEPAE 370

Query: 206 IFRSFFGQQDMFR-----TTRVYRT--RGMRSQERE----EFHGAGLNFVFLLQILPFLL 254
            +R  F +  +F       T +       +   +      + H   L    + +      
Sbjct: 371 -YRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL----VEKQPKEST 425

Query: 255 IFL----LAYLPYSEPDYSLHRNF--NYQIPRTTEKHGIEFYVKSPASFDENFP-----H 303
           I +    L      E +Y+LHR+   +Y IP+T +   +      P   D+ F      H
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL-----IPPYLDQYFYSHIGHH 480

Query: 304 GSSARAVIEDNVIKD-YRNLLWRYCHVELQKRR---WNKNLPTPHCNKLENLD 352
             +        + +  + +  +    +E QK R      N      N L+ L 
Sbjct: 481 LKNIEHPERMTLFRMVFLDFRF----LE-QKIRHDSTAWNASGSILNTLQQLK 528

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 50.6 bits (120), Expect = 5e-07
 Identities = 52/331 (15%), Positives = 85/331 (25%), Gaps = 104/331 (31%)

Query: 24  KQRALKFIKIAQRLN-----DNLSVHEVLAA----CEKL------GVGDSGPNVSSADEK 68
           +    + +K     N      N+   +   A    C+ L       V D    +S+A   
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDF---LSAATTT 287

Query: 69  RLDDQRSKPGLEKLGEGLSGERSYTEE---------------HVELIRQIKRNK----DY 109
            +        L    E  S    Y +                 + +I +  R+     D 
Sbjct: 288 HISLDHHSMTLTP-DEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN 346

Query: 110 YAILGVER-----SCSVE-----EIRKAYRKLSLKVHPDKNKAP--------------GS 145
           +  +  ++       S+      E RK + +LS  V P     P                
Sbjct: 347 WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS--VFPPSAHIPTILLSLIWFDVIKSDV 404

Query: 146 EEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQR----HN-----VRPRRRRAQHDF 196
                K+ K                   ++     +     H          +     D 
Sbjct: 405 MVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDL 464

Query: 197 FDDELDPDEIFRSFFGQQDMFRTTRVYRTRGMRSQER-EEFHGAGLNFVFLLQ------- 248
               LD  + F S  G          +  + +   ER   F    L+F FL Q       
Sbjct: 465 IPPYLD--QYFYSHIG----------HHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDST 512

Query: 249 -------ILPFLLIFLLAYLPY---SEPDYS 269
                  IL   L  L  Y PY   ++P Y 
Sbjct: 513 AWNASGSILN-TLQQLKFYKPYICDNDPKYE 542

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 41.1 bits (96), Expect = 4e-05
 Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 110 YAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSD 161
           +  +G+    + E+++K YRK  L VHP K      E+  K +   F  L+D
Sbjct: 36  WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMI---FMELND 84

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	352
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.86
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.83
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.83
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.81
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.8
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.8
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.8
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.8
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.8
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.79
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.77
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.77
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.77
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.77
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.76
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	99.76
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.75
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.72
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.72
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.69
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.68
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.65
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.64
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.63
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.6
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.6
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.6
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.58
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.58
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.57
2guz_A	71	Mitochondrial import inner membrane translocase su	99.55
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.53
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	99.52
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	99.48
2guz_B	65	Mitochondrial import inner membrane translocase su	98.69
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	97.14
4gco_A	126	Protein STI-1; structural genomics, PSI-biology, m	93.91
4ga2_A	150	E3 SUMO-protein ligase ranbp2; TPR motif, nuclear	93.68
4gcn_A	127	Protein STI-1; structural genomics, PSI-biology, m	93.48
3upv_A	126	Heat shock protein STI1; TPR-fold, adaptor protein	92.77
3ma5_A	100	Tetratricopeptide repeat domain protein; NESG, str	91.8
2l6j_A	111	TPR repeat-containing protein associated with HSP;	91.6
3sz7_A	164	HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G	91.38
4gco_A	126	Protein STI-1; structural genomics, PSI-biology, m	90.71
2xcb_A	142	PCRH, regulatory protein PCRH; protein transport,	90.62
3vtx_A	184	MAMA; tetratricopeptide repeats (TPR) containing p	90.46
1na3_A	91	Designed protein CTPR2; de novo protein; HET: IPT;	90.27
4gcn_A	127	Protein STI-1; structural genomics, PSI-biology, m	90.09
2v5f_A	104	Prolyl 4-hydroxylase subunit alpha-1; endoplasmic	90.0
1pc2_A	152	Mitochondria fission protein; unknown function; NM	89.98
3gyz_A	151	Chaperone protein IPGC; asymmetric homodimer, tetr	89.86
1elw_A	118	TPR1-domain of HOP; HOP, TPR-domain, peptide-compl	89.79
1na3_A	91	Designed protein CTPR2; de novo protein; HET: IPT;	88.99
2hr2_A	159	Hypothetical protein; alpha-alpha superhelix fold,	88.97
1elr_A	131	TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp	88.0
3k9i_A	117	BH0479 protein; putative protein binding protein,	87.74
2vgx_A	148	Chaperone SYCD; alternative dimer assembly, tetrat	87.69
3q49_B	137	STIP1 homology and U box-containing protein 1; E3	87.35
2kat_A	115	Uncharacterized protein; NESG, structure, structur	87.12
1elr_A	131	TPR2A-domain of HOP; HOP, TPR-domain, peptide-comp	86.95
1nzn_A	126	CGI-135 protein, fission protein FIS1P; TPR, unkno	86.8
1hxi_A	121	PEX5, peroxisome targeting signal 1 receptor PEX5;	86.73
2xev_A	129	YBGF; tetratricopeptide, alpha-helical, metal bind	86.53
2vyi_A	131	SGTA protein; chaperone, TPR repeat, phosphoprotei	86.42
2dba_A	148	Smooth muscle cell associated protein-1, isoform 2	85.81
2kc7_A	99	BFR218_protein; tetratricopeptide repeat, all-alph	85.6
2l6j_A	111	TPR repeat-containing protein associated with HSP;	85.44
2r5s_A	176	Uncharacterized protein VP0806; APC090868.1, vibri	85.29
1hxi_A	121	PEX5, peroxisome targeting signal 1 receptor PEX5;	85.14
1elw_A	118	TPR1-domain of HOP; HOP, TPR-domain, peptide-compl	85.13
2dba_A	148	Smooth muscle cell associated protein-1, isoform 2	84.9
3ax2_A	73	Mitochondrial import receptor subunit TOM20 homol;	84.88
1a17_A	166	Serine/threonine protein phosphatase 5; hydrolase,	84.53
3o48_A	134	Mitochondria fission 1 protein; tetratricopeptide	84.37
2kc7_A	99	BFR218_protein; tetratricopeptide repeat, all-alph	84.27
3upv_A	126	Heat shock protein STI1; TPR-fold, adaptor protein	84.07
2e2e_A	177	Formate-dependent nitrite reductase complex NRFG;	83.91
3rkv_A	162	Putative peptidylprolyl isomerase; structural geno	83.85
2fbn_A	198	70 kDa peptidylprolyl isomerase, putative; sulfur	83.65
2xcb_A	142	PCRH, regulatory protein PCRH; protein transport,	83.62
2xev_A	129	YBGF; tetratricopeptide, alpha-helical, metal bind	83.44
1om2_A	95	Protein (mitochondrial import receptor subunit TOM	83.38
2lni_A	133	Stress-induced-phosphoprotein 1; structural genomi	83.05
3gyz_A	151	Chaperone protein IPGC; asymmetric homodimer, tetr	83.01
1y8m_A	144	FIS1; mitochondria, unknown function; NMR {Sacchar	83.0
2lni_A	133	Stress-induced-phosphoprotein 1; structural genomi	82.93
2v5f_A	104	Prolyl 4-hydroxylase subunit alpha-1; endoplasmic	82.7
2kck_A	112	TPR repeat; tetratricopeptide repeat, structural g	82.69
3bee_A	93	Putative YFRE protein; putaive YFRE protein, struc	82.58
2gw1_A	514	Mitochondrial precursor proteins import receptor;	82.34
3sz7_A	164	HSC70 cochaperone (SGT); TPR domain, GET4, GET5, G	82.17
3uq3_A	258	Heat shock protein STI1; HSP90, peptide binding, c	82.06
2vyi_A	131	SGTA protein; chaperone, TPR repeat, phosphoprotei	81.24
4ga2_A	150	E3 SUMO-protein ligase ranbp2; TPR motif, nuclear	80.85
2vgx_A	148	Chaperone SYCD; alternative dimer assembly, tetrat	80.7
1na0_A	125	Designed protein CTPR3; de novo protein; HET: IPT;	80.66
2fbn_A	198	70 kDa peptidylprolyl isomerase, putative; sulfur	80.54
3rkv_A	162	Putative peptidylprolyl isomerase; structural geno	80.27
1zu2_A	158	Mitochondrial import receptor subunit TOM20-3; TPR	80.03

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.86  E-value=1.9e-22  Score=164.67  Aligned_cols=98  Identities=38%  Similarity=0.706  Sum_probs=66.9

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhhccccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFEHNQRHN  184 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~~~  184 (352)
                      ..|||+||||+++|+.++||+|||+|++++|||++. .+.+++.|+.|++||+||+||.+|+.||..|. .+...+    
T Consensus         2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~-~~~~~~----   76 (103)
T 1bq0_A            2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGH-AAFEQG----   76 (103)
T ss_dssp             CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTT-TSSCSC----
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhh-hhhccc----
Confidence            468999999999999999999999999999999998 47889999999999999999999999999997 443311    


Q ss_pred             CCCCCcCCCCCCCCCCCChHHHHHhhhCCC
Q 047551          185 VRPRRRRAQHDFFDDELDPDEIFRSFFGQQ  214 (352)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~pediF~~fFGg~  214 (352)
                        ..   +.++ +...+++.++|..|||+.
T Consensus        77 --~~---~~~~-~~~~~~~~~~f~~~f~~~  100 (103)
T 1bq0_A           77 --GM---GGGG-FGGGADFSDIFGDVFGDI  100 (103)
T ss_dssp             --C---------------------------
T ss_pred             --Cc---CCCC-CCCCCCHHHHHHHHHHhh
Confidence              00   0011 111234568888888653

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.83  E-value=8.7e-21  Score=151.38  Aligned_cols=80  Identities=43%  Similarity=0.662  Sum_probs=75.8

Q ss_pred             CCCCCCHHHHHHHHHHhcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhh
Q 047551           88 GERSYTEEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRH  167 (352)
Q Consensus        88 ~~~~~t~~~~~~~~~~~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~  167 (352)
                      +...|+.++.+.+.++....|||+||||+++|+.++||+|||+|++++||||+..+++.++|+.|++||++|+||.+|+.
T Consensus         8 ~~~~~s~~~~~~~~~~~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~   87 (90)
T 2ys8_A            8 SSASFTKEQADAIRRIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP   87 (90)
T ss_dssp             CCCCCCHHHHHHHHHHHTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred             cccCCCHHHHHHHHHHhcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence            34579999999999999999999999999999999999999999999999999999999999999999999999998874

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.83  E-value=7.1e-21  Score=147.20  Aligned_cols=70  Identities=49%  Similarity=0.868  Sum_probs=66.7

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcch
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDE  176 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~  176 (352)
                      ..|||+||||+++++.++||+|||+|++++|||++..+++.+.|+.|++||++|+||.+|..||..|. ++
T Consensus         2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~-~~   71 (77)
T 1hdj_A            2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGE-EG   71 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCG-GG
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHcc-cc
Confidence            46899999999999999999999999999999999989999999999999999999999999999987 44

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.81  E-value=1.6e-20  Score=145.52  Aligned_cols=69  Identities=52%  Similarity=0.932  Sum_probs=66.4

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ...|||+||||+++++.++||+|||+|++++|||++..+++.+.|+.|++||++|+||.+|..||..|.
T Consensus         5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~   73 (78)
T 2ctp_A            5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGS   73 (78)
T ss_dssp             CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCS
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence            368999999999999999999999999999999999888899999999999999999999999999987

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.80  E-value=1.9e-20  Score=148.54  Aligned_cols=72  Identities=44%  Similarity=0.852  Sum_probs=67.6

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE  178 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~  178 (352)
                      ..|||+||||+++|+.++||+|||+|++++|||++..+.+.+.|+.|++||++|+||.+|..||..|. .+..
T Consensus         6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~-~~~~   77 (88)
T 2ctr_A            6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGH-SAFT   77 (88)
T ss_dssp             CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCH-HHHT
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc-cccc
Confidence            68999999999999999999999999999999999888889999999999999999999999999987 4443

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.80  E-value=2.9e-20  Score=147.51  Aligned_cols=69  Identities=46%  Similarity=0.828  Sum_probs=66.7

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ...|||+||||+++++.++||+|||+|++++|||++..+.+++.|+.|++||++|+||.+|..||..|.
T Consensus        15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   83 (88)
T 2cug_A           15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGS   83 (88)
T ss_dssp             SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence            378999999999999999999999999999999999999999999999999999999999999999987

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.80  E-value=5.3e-20  Score=140.91  Aligned_cols=68  Identities=44%  Similarity=0.802  Sum_probs=62.8

Q ss_pred             hcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          104 KRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       104 ~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ....|||+||||+++++.++||++||+|++++|||+++  ++.+.|+.|++||++|+||.+|..||.+|.
T Consensus         5 ~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   72 (73)
T 2och_A            5 VKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNP--DGAEQFKQISQAYEVLSDEKKRQIYDQGGE   72 (73)
T ss_dssp             -CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCT--TCHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCc--CHHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence            35789999999999999999999999999999999984  457999999999999999999999999985

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.80  E-value=4.3e-20  Score=143.36  Aligned_cols=69  Identities=46%  Similarity=0.802  Sum_probs=65.6

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ...|||+||||+++++.++||++||+|++++|||++. .+.+.+.|+.|++||++|+||.+|..||..|.
T Consensus         5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   74 (79)
T 2dn9_A            5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGS   74 (79)
T ss_dssp             CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCC
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccC
Confidence            3689999999999999999999999999999999997 47889999999999999999999999999987

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.80  E-value=3.9e-20  Score=148.02  Aligned_cols=72  Identities=40%  Similarity=0.727  Sum_probs=65.7

Q ss_pred             hcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhh
Q 047551          104 KRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE  178 (352)
Q Consensus       104 ~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~  178 (352)
                      ....|||+||||+++++.++||+|||+|++++|||++.  +..+.|+.|++||+||+||.+|+.||..|. ....
T Consensus         5 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~--~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~-~~~~   76 (92)
T 2o37_A            5 VKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPT--GDTEKFKEISEAFEILNDPQKREIYDQYGL-EAAR   76 (92)
T ss_dssp             CSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTT--CCHHHHHHHHHHHHHHTSHHHHHHHHHHCH-HHHH
T ss_pred             ccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCC--ChHHHHHHHHHHHHHHCCHHHHHHHHHHCH-HHhh
Confidence            35789999999999999999999999999999999984  567899999999999999999999999987 5443

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=8.5e-20  Score=142.65  Aligned_cols=68  Identities=50%  Similarity=0.771  Sum_probs=64.0

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++++.++||+|||+|++++|||++...  .+++.|+.|++||++|+||.+|..||..|.
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~   77 (82)
T 2ej7_A            8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGS   77 (82)
T ss_dssp             SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCC
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCc
Confidence            58999999999999999999999999999999999753  567899999999999999999999999987

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.77  E-value=1.7e-19  Score=144.05  Aligned_cols=68  Identities=49%  Similarity=0.797  Sum_probs=64.1

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++++.++||++||+|++++|||++...  .+++.|+.|++||++|+||.+|..||..|.
T Consensus         8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~   77 (92)
T 2dmx_A            8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGC   77 (92)
T ss_dssp             CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCS
T ss_pred             CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence            57999999999999999999999999999999999753  578899999999999999999999999987

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.77  E-value=1.9e-19  Score=149.18  Aligned_cols=68  Identities=38%  Similarity=0.674  Sum_probs=65.2

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++|+.++||+|||+|++++||||+. .+.+++.|+.|++||+||+||.+|..||..|.
T Consensus        19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~   87 (112)
T 2ctq_A           19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRR   87 (112)
T ss_dssp             CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhh
Confidence            589999999999999999999999999999999997 68899999999999999999999999999875

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.77  E-value=1.5e-19  Score=146.80  Aligned_cols=67  Identities=46%  Similarity=0.753  Sum_probs=62.9

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .|||+||||+++|+.++||+|||+|++++|||+++..  .+++.|+.|++||++|+||.+|..||..|.
T Consensus         2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~   70 (99)
T 2lgw_A            2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGR   70 (99)
T ss_dssp             CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence            5899999999999999999999999999999999754  378899999999999999999999999876

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.77  E-value=3.9e-19  Score=144.08  Aligned_cols=69  Identities=29%  Similarity=0.550  Sum_probs=64.8

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ...|||+||||+++|+.++||+|||+|++++|||++. .+.+.+.|+.|++||+||+||.+|..||....
T Consensus        15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   84 (99)
T 2yua_A           15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL   84 (99)
T ss_dssp             CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred             CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            3689999999999999999999999999999999996 57789999999999999999999999999765

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.76  E-value=1.8e-19  Score=144.21  Aligned_cols=69  Identities=32%  Similarity=0.629  Sum_probs=64.0

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC-------CCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-------PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~-------~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ...|||+||||+++|+.++||+|||+|++++|||++..       +.+.+.|+.|++||+||+||.+|+.||....
T Consensus        14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~   89 (94)
T 1wjz_A           14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence            47899999999999999999999999999999999863       4578999999999999999999999998765

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=99.76  E-value=3.7e-20  Score=180.02  Aligned_cols=68  Identities=41%  Similarity=0.711  Sum_probs=0.0

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++|+.++||+|||+||++||||+|+.+.|+++|+.|++||++|+||.+|+.||.++.
T Consensus        27 ~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~   94 (329)
T 3lz8_A           27 LKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ   94 (329)
T ss_dssp             --------------------------------------------------------------------
T ss_pred             ccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence            47999999999999999999999999999999999988999999999999999999999999999854

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.75  E-value=5e-19  Score=145.94  Aligned_cols=69  Identities=38%  Similarity=0.740  Sum_probs=65.2

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ...|||+||||+++|+.++||+|||+|++++|||++. .+.+.+.|+.|++||+||+||.+|+.||.+|.
T Consensus        15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~   84 (109)
T 2ctw_A           15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGS   84 (109)
T ss_dssp             CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence            3689999999999999999999999999999999997 46788999999999999999999999999987

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.72  E-value=1e-18  Score=143.84  Aligned_cols=69  Identities=33%  Similarity=0.527  Sum_probs=64.6

Q ss_pred             cCCCchhhcCcCCCC-CHHHHHHHHHHhhhhhCCCCCCC----CCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          105 RNKDYYAILGVERSC-SVEEIRKAYRKLSLKVHPDKNKA----PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a-~~~eIkkaYrkla~~~HPDk~~~----~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ...|||+||||+++| +.++||+|||+|++++|||++..    +.+.+.|+.|++||++|+||.+|+.||..+.
T Consensus        13 ~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~   86 (109)
T 2qsa_A           13 GLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD   86 (109)
T ss_dssp             TTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             CCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence            478999999999999 99999999999999999999875    5678999999999999999999999998765

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.72  E-value=6.5e-18  Score=152.13  Aligned_cols=67  Identities=43%  Similarity=0.864  Sum_probs=64.4

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .|||+||||+++|+.++||+|||+|++++||||++ .+.+.++|+.|++||++|+||.+|+.||.+|.
T Consensus         2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~   69 (210)
T 3apq_A            2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE   69 (210)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTT
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcc
Confidence            58999999999999999999999999999999995 67899999999999999999999999999987

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.69  E-value=1.3e-17  Score=145.34  Aligned_cols=68  Identities=32%  Similarity=0.650  Sum_probs=63.2

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC-------cHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG-------SEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~-------a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++++.++||+|||+|++++||||+....       +.+.|+.|++||+||+||.+|+.||..+.
T Consensus         9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~   83 (155)
T 2l6l_A            9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC   83 (155)
T ss_dssp             CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred             CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence            579999999999999999999999999999999998654       46899999999999999999999998764

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.68  E-value=6e-18  Score=140.77  Aligned_cols=65  Identities=34%  Similarity=0.425  Sum_probs=60.9

Q ss_pred             CCCchhhcCcCCCCCH--HHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSV--EEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~--~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++|+.  ++||+|||+|++++||||++.   +++|+.|++||+||+||.+|+.||.+|.
T Consensus         7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~   73 (114)
T 1gh6_A            7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence            4689999999999999  999999999999999999854   6899999999999999999999998875

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.65  E-value=5.2e-17  Score=126.48  Aligned_cols=63  Identities=21%  Similarity=0.398  Sum_probs=57.5

Q ss_pred             CCchhhcCcCCC--CCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          107 KDYYAILGVERS--CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       107 ~d~Y~iLgv~~~--a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .++|+||||+++  ++.++||+|||+|++++|||++   ++.+.|+.|++||++|+|+.+|..++ +|.
T Consensus        11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~---~~~~~f~~i~~AYe~L~~~~~r~~~~-~g~   75 (79)
T 1faf_A           11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLWGTFKTEVYNLRMN-LGG   75 (79)
T ss_dssp             HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS---CCHHHHHHHHHHHHHHHHHHHHHTTC-CSS
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCC---CCHHHHHHHHHHHHHHhhHHHHHHHh-cCC
Confidence            578999999999  9999999999999999999997   56899999999999999999999844 444

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.64  E-value=2.7e-17  Score=146.11  Aligned_cols=65  Identities=34%  Similarity=0.458  Sum_probs=58.4

Q ss_pred             CCCchhhcCcCCCCC--HHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCS--VEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~--~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++|+  .++||+|||+||+++|||++++   +++|+.|++||++|+||.+|+.||.+|.
T Consensus        10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~---~e~F~~I~~AYevLsdp~kR~~YD~~G~   76 (174)
T 2pf4_E           10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG   76 (174)
T ss_dssp             HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C---CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred             cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            478999999999998  6999999999999999999854   5799999999999999999999999986

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.60  E-value=1e-16  Score=127.42  Aligned_cols=60  Identities=27%  Similarity=0.307  Sum_probs=55.0

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSR  165 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR  165 (352)
                      ..++|+||||+++|+.++||+|||+|+++||||+++..  .+++.|+.|++||++|+|...|
T Consensus        15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r   76 (88)
T 1iur_A           15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL   76 (88)
T ss_dssp             HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence            46789999999999999999999999999999999753  4789999999999999998766

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.60  E-value=2.9e-16  Score=139.32  Aligned_cols=67  Identities=18%  Similarity=0.311  Sum_probs=60.9

Q ss_pred             CCchhhcCcCCCC--CHHHHHHHHHHhhhhhCCCCCCCCC------cHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          107 KDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPG------SEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       107 ~d~Y~iLgv~~~a--~~~eIkkaYrkla~~~HPDk~~~~~------a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      .|||+||||++++  +..+||++||+|++++||||++...      |.+.|+.|++||+||+||.+|+.||....
T Consensus         1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~   75 (171)
T 1fpo_A            1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH   75 (171)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred             CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence            3799999999999  9999999999999999999997654      34689999999999999999999998643

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.60  E-value=2.1e-16  Score=141.28  Aligned_cols=62  Identities=24%  Similarity=0.454  Sum_probs=58.6

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC----cHHHHHHHHHHHHhcCchhhhhhh
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG----SEEAFKKVCKAFKCLSDDDSRRHY  168 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~----a~e~f~~I~~Ay~vLsd~~kR~~Y  168 (352)
                      .|||+||||+++|+.++||+|||+|++++||||+....    |++.|+.|++||+||+|+.+|+.|
T Consensus       117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y  182 (182)
T 1n4c_A          117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY  182 (182)
T ss_dssp             CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence            69999999999999999999999999999999997654    788999999999999999999987

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.58  E-value=2.2e-16  Score=129.66  Aligned_cols=58  Identities=21%  Similarity=0.378  Sum_probs=52.5

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC--------cHHHHHHHHHHHHhcCchh
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG--------SEEAFKKVCKAFKCLSDDD  163 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~--------a~e~f~~I~~Ay~vLsd~~  163 (352)
                      ...|||+|||++. |+.++||+|||+|++++||||++.++        |+++|+.|++||+||+|+.
T Consensus        39 ~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~  104 (106)
T 3ag7_A           39 SGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG  104 (106)
T ss_dssp             TTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred             ccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence            3579999999996 99999999999999999999987543        4789999999999999975

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.58  E-value=7.7e-16  Score=140.50  Aligned_cols=66  Identities=29%  Similarity=0.413  Sum_probs=59.7

Q ss_pred             CCCchhhcCcCCC--CCHHHHHHHHHHhhhhhCCCCCCCCC------cHHHHHHHHHHHHhcCchhhhhhhccc
Q 047551          106 NKDYYAILGVERS--CSVEEIRKAYRKLSLKVHPDKNKAPG------SEEAFKKVCKAFKCLSDDDSRRHYDHV  171 (352)
Q Consensus       106 ~~d~Y~iLgv~~~--a~~~eIkkaYrkla~~~HPDk~~~~~------a~e~f~~I~~Ay~vLsd~~kR~~YD~~  171 (352)
                      ..|||+||||+++  ++..+||++||+|++++|||++....      |.+.|+.|++||+||+||.+|+.||..
T Consensus        42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~  115 (207)
T 3bvo_A           42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK  115 (207)
T ss_dssp             TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence            6899999999986  79999999999999999999997543      456799999999999999999999953

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.57  E-value=3.7e-16  Score=125.09  Aligned_cols=55  Identities=24%  Similarity=0.410  Sum_probs=50.7

Q ss_pred             CCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC----cHHHHHHHHHHHHhcCc
Q 047551          107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG----SEEAFKKVCKAFKCLSD  161 (352)
Q Consensus       107 ~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~----a~e~f~~I~~Ay~vLsd  161 (352)
                      .++|+||||+++|+.++||+|||++|+++|||||+...    |+++|+.|++||+||.+
T Consensus        33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            58999999999999999999999999999999997543    78899999999999975

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.55  E-value=1.3e-15  Score=116.16  Aligned_cols=56  Identities=27%  Similarity=0.367  Sum_probs=52.0

Q ss_pred             CCchhhcCcCC-CCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhh
Q 047551          107 KDYYAILGVER-SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSR  165 (352)
Q Consensus       107 ~d~Y~iLgv~~-~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR  165 (352)
                      .++|+||||++ +++.++||+|||+|++++|||++   ++.+.|+.|++||++|+|+..|
T Consensus        14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~---g~~~~f~~i~~Aye~L~~~~~r   70 (71)
T 2guz_A           14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKG---GSPFLATKINEAKDFLEKRGIS   70 (71)
T ss_dssp             HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGT---CCHHHHHHHHHHHHHHHHHCCC
T ss_pred             HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCC---CCHHHHHHHHHHHHHHhhhhhc
Confidence            57899999999 79999999999999999999996   6778999999999999998766

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.53  E-value=2e-15  Score=135.12  Aligned_cols=66  Identities=23%  Similarity=0.380  Sum_probs=60.1

Q ss_pred             cCCCchhhc------CcCC-CCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccC
Q 047551          105 RNKDYYAIL------GVER-SCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVG  172 (352)
Q Consensus       105 ~~~d~Y~iL------gv~~-~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g  172 (352)
                      ...|||+||      |+++ +++..+||++||+|++++|||+++.  +.+.|+.|++||+||+||.+|+.||...
T Consensus         9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l   81 (181)
T 3uo3_A            9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL   81 (181)
T ss_dssp             CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred             CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence            368999999      4665 8999999999999999999999865  8889999999999999999999999843

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=99.52  E-value=2e-14  Score=138.44  Aligned_cols=145  Identities=26%  Similarity=0.329  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHH-HHHhcCCCCCCCCCCCcccccccccCCCcccccccCCCC
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLA-ACEKLGVGDSGPNVSSADEKRLDDQRSKPGLEKLGEGLS   87 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (352)
                      -...+|..+...|++++|+.++.+|+.++|+.. +...+. .+..++  ....+.        .      ....+-...+
T Consensus       297 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~--~~~~A~--------~------~~~~al~~~p  360 (450)
T 2y4t_A          297 SKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEE--MYDEAI--------Q------DYETAQEHNE  360 (450)
T ss_dssp             HHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTT--CHHHHH--------H------HHHHHHTTSS
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhc--CHHHHH--------H------HHHHHHHhCc
Confidence            456678888999999999999999999999753 322222 222221  100000        0      0000000000


Q ss_pred             CCCCCCHHHH---HHHHHHhcCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC----cHHHHHHHHHHHHhcC
Q 047551           88 GERSYTEEHV---ELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG----SEEAFKKVCKAFKCLS  160 (352)
Q Consensus        88 ~~~~~t~~~~---~~~~~~~~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~----a~e~f~~I~~Ay~vLs  160 (352)
                      .... .-..+   ....+.....++|++||+.+.++.++|+++|+++++++|||+.+.+.    +++.|+.|++||++|+
T Consensus       361 ~~~~-~~~~l~~~~~~~~~~~~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~  439 (450)
T 2y4t_A          361 NDQQ-IREGLEKAQRLLKQSQKRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLS  439 (450)
T ss_dssp             SCHH-HHHHHHHHHHHHHHHHSCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             chHH-HHHHHHHHHHHhhcccchhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhC
Confidence            0000 00011   11112234679999999999999999999999999999999987644    7889999999999999


Q ss_pred             chhhhhhhccc
Q 047551          161 DDDSRRHYDHV  171 (352)
Q Consensus       161 d~~kR~~YD~~  171 (352)
                      ||++|..||.+
T Consensus       440 d~~~r~~yd~g  450 (450)
T 2y4t_A          440 DPEMRKKFDDG  450 (450)
T ss_dssp             GGGGC------
T ss_pred             CHHHHHhccCC
Confidence            99999999973

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=99.48  E-value=3.6e-15  Score=158.35  Aligned_cols=73  Identities=41%  Similarity=0.830  Sum_probs=40.9

Q ss_pred             cCCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCC-CCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchhh
Q 047551          105 RNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNK-APGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEFE  178 (352)
Q Consensus       105 ~~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~-~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~~  178 (352)
                      ...|||+||||+++|+.++||+|||+|++++||||++ .+.++++|+.|++||++|+||.+|+.||.+|. .+..
T Consensus        19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~-~~~~   92 (780)
T 3apo_A           19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGE-KGLE   92 (780)
T ss_dssp             ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC-------
T ss_pred             CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcc-cccc
Confidence            4789999999999999999999999999999999995 67889999999999999999999999999997 5443

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=98.69  E-value=1.3e-08  Score=76.11  Aligned_cols=49  Identities=27%  Similarity=0.243  Sum_probs=45.8

Q ss_pred             hhhcCcCCC---CCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCc
Q 047551          110 YAILGVERS---CSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSD  161 (352)
Q Consensus       110 Y~iLgv~~~---a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd  161 (352)
                      |.||||+++   ++.++|+++||+|....||||.   |......+|++|+++|..
T Consensus         7 ~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkG---GS~yl~~ki~~Ake~l~~   58 (65)
T 2guz_B            7 CKILNIEESKGDLNMDKINNRFNYLFEVNDKEKG---GSFYLQSKVYRAAERLKW   58 (65)
T ss_dssp             HHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGT---CCHHHHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHHH
Confidence            789999999   9999999999999999999996   788899999999999864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=97.14  E-value=0.00028  Score=73.59  Aligned_cols=133  Identities=13%  Similarity=0.074  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHHHhcCCCCC-CCCCCCcccccccccCCCccccc---ccC
Q 047551            9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEKLGVGDS-GPNVSSADEKRLDDQRSKPGLEK---LGE   84 (352)
Q Consensus         9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~   84 (352)
                      .-...+|..++..|++++|+..+++|++++|... ...+.....+-.+.. ..+.  ...       .....+.   ...
T Consensus       535 ~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~-~a~~~~~~~~~~~~~~~~~~--~~~-------~~~A~~~l~~~~~  604 (681)
T 2pzi_A          535 SAAFGLARARSAEGDRVGAVRTLDEVPPTSRHFT-TARLTSAVTLLSGRSTSEVT--EEQ-------IRDAARRVEALPP  604 (681)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTHH-HHHHHHHHHTC-------CC--HHH-------HHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHhhcccCcccH-HHHHHHHHHHHccCCCCCCC--HHH-------HHHHHHHHhhCCC
Confidence            3467788888999999999999999999999843 222222222211010 0000  000       0000000   000


Q ss_pred             CCCCCCCCCHHHHHHHH--HHhcCCCchhhcCcCCCCCH--HHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHh
Q 047551           85 GLSGERSYTEEHVELIR--QIKRNKDYYAILGVERSCSV--EEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKC  158 (352)
Q Consensus        85 ~~~~~~~~t~~~~~~~~--~~~~~~d~Y~iLgv~~~a~~--~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~v  158 (352)
                      .......+..+..+...  ...+..|||.|||++.+...  .+|+++||+||+..+++       .+.+..|..|..|
T Consensus       605 ~~~~~~~l~~~ll~~~l~~~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v  675 (681)
T 2pzi_A          605 TEPRVLQIRALVLGGALDWLKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV  675 (681)
T ss_dssp             TSTTHHHHHHHHHHHHHHHHTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence            00000001111111111  23447889999999776655  77999999999965554       5788888888876

>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}

Probab=93.91  E-value=0.14  Score=40.89  Aligned_cols=40  Identities=15%  Similarity=0.070  Sum_probs=36.7

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      -|.+.|+...+.+..+++.|++++|+..+.+|++++|...
T Consensus         8 inP~~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~   47 (126)
T 4gco_A            8 INPELAQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENA   47 (126)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence            4678888899999999999999999999999999999854

>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*

Probab=93.68  E-value=0.091  Score=43.13  Aligned_cols=48  Identities=13%  Similarity=0.144  Sum_probs=39.3

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551            3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC   50 (352)
Q Consensus         3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~   50 (352)
                      .+.+.+.....+|..+++.|++++|++++++|++++|+.. +...+..+
T Consensus        26 ~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~   74 (150)
T 4ga2_A           26 SPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLL   74 (150)
T ss_dssp             SHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred             cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence            3456677788999999999999999999999999999865 44455444

>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}

Probab=93.48  E-value=0.16  Score=40.36  Aligned_cols=38  Identities=16%  Similarity=0.082  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .|.|....+++..+++.|++++|+.++.+|++++|+..
T Consensus         5 ~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~   42 (127)
T 4gcn_A            5 TDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNI   42 (127)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence            47788888999999999999999999999999999854

>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}

Probab=92.77  E-value=0.25  Score=38.21  Aligned_cols=37  Identities=11%  Similarity=-0.084  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +.|..+..+|..++..|++++|+..+.+|++++|+..
T Consensus         2 ~~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~   38 (126)
T 3upv_A            2 MKAEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDA   38 (126)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCh
Confidence            4678899999999999999999999999999999854

>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A

Probab=91.80  E-value=0.27  Score=37.19  Aligned_cols=45  Identities=13%  Similarity=0.177  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551            6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC   50 (352)
Q Consensus         6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~   50 (352)
                      +.+.-+..+|..++..|++++|++.+++|++++|+.. +...|..+
T Consensus         5 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~   50 (100)
T 3ma5_A            5 EDPFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKL   50 (100)
T ss_dssp             CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence            3455678899999999999999999999999999865 44444444

>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}

Probab=91.60  E-value=0.33  Score=36.02  Aligned_cols=36  Identities=6%  Similarity=-0.050  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .+..+..+|..++..|++++|++.+.+|++++|...
T Consensus         3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~   38 (111)
T 2l6j_A            3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNP   38 (111)
T ss_dssp             HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCH
Confidence            567788999999999999999999999999999854

>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}

Probab=91.38  E-value=0.43  Score=38.89  Aligned_cols=40  Identities=13%  Similarity=0.086  Sum_probs=36.3

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .+.+.|..+..+|..++..|++++|+..+.+|++++|+..
T Consensus         6 ~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~   45 (164)
T 3sz7_A            6 APTPESDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANP   45 (164)
T ss_dssp             SCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred             hhhhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCH
Confidence            3567888999999999999999999999999999999854

>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}

Probab=90.71  E-value=0.34  Score=38.53  Aligned_cols=31  Identities=23%  Similarity=0.072  Sum_probs=17.7

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      +..+|..++..|++++|+..+++|++++|+.
T Consensus        50 ~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~   80 (126)
T 4gco_A           50 YSNRAACLTKLMEFQRALDDCDTCIRLDSKF   80 (126)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHhhHHHhhccHHHHHHHHHHHHHhhhhh
Confidence            4455555555566666666666666665553

>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A

Probab=90.62  E-value=0.73  Score=36.74  Aligned_cols=40  Identities=15%  Similarity=0.068  Sum_probs=36.1

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .+.+.+.....+|..++..|++++|++.+.++++++|+..
T Consensus        13 ~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~   52 (142)
T 2xcb_A           13 LSEDTLEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDA   52 (142)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             CCHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccH
Confidence            4567788899999999999999999999999999999854

>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A

Probab=90.46  E-value=0.36  Score=39.68  Aligned_cols=36  Identities=14%  Similarity=0.148  Sum_probs=32.1

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .+.-...++..++..|++++|++.+++|++++|+..
T Consensus         4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~~p~~~   39 (184)
T 3vtx_A            4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKADPNNV   39 (184)
T ss_dssp             CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence            355678899999999999999999999999999854

>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A

Probab=90.27  E-value=0.8  Score=32.55  Aligned_cols=37  Identities=16%  Similarity=0.238  Sum_probs=32.9

Q ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +.+.-+..+|..++..|++++|++++.+|++++|...
T Consensus         7 ~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~   43 (91)
T 1na3_A            7 NSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNA   43 (91)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             ccHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence            3566788899999999999999999999999999854

>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}

Probab=90.09  E-value=0.49  Score=37.48  Aligned_cols=38  Identities=5%  Similarity=-0.010  Sum_probs=29.4

Q ss_pred             HHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHH
Q 047551           13 RIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAAC   50 (352)
Q Consensus        13 ~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~   50 (352)
                      .++..+...|++++|++++.+|+.++|++++...|..+
T Consensus        88 ~lg~~~~~~~~~~~A~~~~~kal~~~~~~~~~~~l~~l  125 (127)
T 4gcn_A           88 RAGNAFQKQNDLSLAVQWFHRSLSEFRDPELVKKVKEL  125 (127)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHSCCHHHHHHHHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHhhCcCHHHHHHHHHh
Confidence            34555677899999999999999999997655445444

>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A

Probab=90.00  E-value=0.63  Score=35.87  Aligned_cols=31  Identities=16%  Similarity=0.186  Sum_probs=29.2

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551            8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLN   38 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~   38 (352)
                      |+-|.+|+..++..|++..|+.|+++|+++.
T Consensus         5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~   35 (104)
T 2v5f_A            5 AEDCFELGKVAYTEADYYHTELWMEQALRQL   35 (104)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccchHHHHHHHHHHHHhh
Confidence            5679999999999999999999999999986

>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1

Probab=89.98  E-value=0.71  Score=39.51  Aligned_cols=44  Identities=14%  Similarity=0.101  Sum_probs=37.5

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHh
Q 047551            9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEK   52 (352)
Q Consensus         9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~   52 (352)
                      +-+..+|..+++.|||++|+++++++++++|... +..|...++.
T Consensus        72 d~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~  116 (152)
T 1pc2_A           72 DYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDK  116 (152)
T ss_dssp             HHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence            3467788999999999999999999999999765 7777777754

>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A

Probab=89.86  E-value=0.87  Score=37.89  Aligned_cols=41  Identities=12%  Similarity=-0.044  Sum_probs=36.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            2 DGNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         2 e~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +-+.+.+.-+..+|..+++.|++++|+..+.+|++++|...
T Consensus        30 ~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~   70 (151)
T 3gyz_A           30 AIPDDMMDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNV   70 (151)
T ss_dssp             CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             CCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence            34667788899999999999999999999999999999865

>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1

Probab=89.79  E-value=0.63  Score=34.24  Aligned_cols=37  Identities=16%  Similarity=0.190  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +.+..+..+|..++..|++++|++++++++.++|+..
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~   38 (118)
T 1elw_A            2 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNH   38 (118)
T ss_dssp             CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             chHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcH
Confidence            3567788999999999999999999999999999753

>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A

Probab=88.99  E-value=0.67  Score=32.98  Aligned_cols=32  Identities=16%  Similarity=0.260  Sum_probs=28.3

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +..+|..++..|++++|++.+.+|++++|+..
T Consensus        46 ~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~   77 (91)
T 1na3_A           46 WYNLGNAYYKQGDYDEAIEYYQKALELDPNNA   77 (91)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCH
Confidence            45677888999999999999999999999864

>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8

Probab=88.97  E-value=0.35  Score=41.65  Aligned_cols=37  Identities=14%  Similarity=0.142  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      ..+|..++.++...++.|+++.|+..+.||++++|+.
T Consensus         8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~   44 (159)
T 2hr2_A            8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTM   44 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCC
Confidence            4678899999999999999999999999999999994

>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A

Probab=88.00  E-value=1.3  Score=33.12  Aligned_cols=37  Identities=22%  Similarity=0.225  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +.|..+..+|..++..|++++|+..+.+|+.++|...
T Consensus         2 ~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~   38 (131)
T 1elr_A            2 KQALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNM   38 (131)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccH
Confidence            4567789999999999999999999999999999854

>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}

Probab=87.74  E-value=1.2  Score=34.19  Aligned_cols=38  Identities=16%  Similarity=0.074  Sum_probs=33.3

Q ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .+.+.-...+|..++..|++++|++.+++|++++|+..
T Consensus        24 p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~   61 (117)
T 3k9i_A           24 KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQ   61 (117)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCch
Confidence            45556678889999999999999999999999999864

>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*

Probab=87.69  E-value=1.5  Score=35.58  Aligned_cols=40  Identities=18%  Similarity=0.037  Sum_probs=35.7

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .+.+.+.....+|..++..|++++|+..+.+|+.++|+..
T Consensus        16 ~~p~~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~   55 (148)
T 2vgx_A           16 ISSDTLEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDS   55 (148)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             CCHhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccH
Confidence            4566777889999999999999999999999999999854

>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*

Probab=87.35  E-value=0.68  Score=35.79  Aligned_cols=38  Identities=13%  Similarity=-0.041  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      ...+..+..+|..++..|+++.|+..+.+|++++|+..
T Consensus         6 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~   43 (137)
T 3q49_B            6 SPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA   43 (137)
T ss_dssp             CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             cccHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcH
Confidence            34567789999999999999999999999999999854

>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}

Probab=87.12  E-value=0.84  Score=34.67  Aligned_cols=36  Identities=14%  Similarity=0.156  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .+.-+..+|..++..|++++|++.+.+|++++|...
T Consensus        18 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~   53 (115)
T 2kat_A           18 NMLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYS   53 (115)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             cHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcH
Confidence            445577889999999999999999999999999864

>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A

Probab=86.95  E-value=1  Score=33.68  Aligned_cols=43  Identities=16%  Similarity=0.118  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHH
Q 047551            8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAAC   50 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~   50 (352)
                      +.-+..+|..++..|++++|++++.++++++|+..+...+..+
T Consensus        79 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~l~~~  121 (131)
T 1elr_A           79 AKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRTPDVLKKCQQA  121 (131)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence            4456777888999999999999999999999975555555544

>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A

Probab=86.80  E-value=1.3  Score=36.61  Aligned_cols=42  Identities=14%  Similarity=0.152  Sum_probs=36.4

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHh
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEK   52 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~   52 (352)
                      ..-+|..+++.|||++|+++++..+++.|... +..|...++.
T Consensus        77 lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~~i~~  119 (126)
T 1nzn_A           77 VFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDK  119 (126)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence            55789999999999999999999999999765 7777777754

>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1

Probab=86.73  E-value=1.1  Score=35.02  Aligned_cols=41  Identities=5%  Similarity=-0.077  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC   50 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~   50 (352)
                      ..+.+|..++..|++++|+..+++|++++|+.. +...+..+
T Consensus        19 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~   60 (121)
T 1hxi_A           19 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLT   60 (121)
T ss_dssp             CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence            467889999999999999999999999999854 44344433

>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}

Probab=86.53  E-value=1.6  Score=33.18  Aligned_cols=31  Identities=13%  Similarity=-0.113  Sum_probs=18.9

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      ...+|..++..|++++|+..+.++++++|+.
T Consensus        42 ~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~   72 (129)
T 2xev_A           42 LYWLGESYYATRNFQLAEAQFRDLVSRYPTH   72 (129)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence            4445566666666666666666666666654

>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1

Probab=86.42  E-value=1.6  Score=32.47  Aligned_cols=39  Identities=23%  Similarity=0.180  Sum_probs=34.6

Q ss_pred             CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +...+.-...+|..++..|++++|+.++.+++.++|+..
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~   46 (131)
T 2vyi_A            8 DSAEAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANA   46 (131)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             chhhhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCH
Confidence            456677889999999999999999999999999999753

>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.81  E-value=0.76  Score=35.63  Aligned_cols=37  Identities=16%  Similarity=0.073  Sum_probs=33.5

Q ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      .+.+..+..+|..++..|++++|++.++++++++|+.
T Consensus        25 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~   61 (148)
T 2dba_A           25 ASSVEQLRKEGNELFKCGDYGGALAAYTQALGLDATP   61 (148)
T ss_dssp             CCCHHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCH
T ss_pred             hHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccc
Confidence            3567788999999999999999999999999999984

>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}

Probab=85.60  E-value=1.4  Score=32.19  Aligned_cols=33  Identities=21%  Similarity=0.138  Sum_probs=26.0

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      -...+|..++..|++++|++.+.+|++++|+..
T Consensus        37 ~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~   69 (99)
T 2kc7_A           37 AYYLMGNAYRKLGDWQKALNNYQSAIELNPDSP   69 (99)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTST
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcH
Confidence            345567777888888888888888888888765

>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}

Probab=85.44  E-value=0.78  Score=33.89  Aligned_cols=32  Identities=16%  Similarity=0.143  Sum_probs=28.4

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      -+..+|..++..|++++|++.+.+|++++|+.
T Consensus        40 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~   71 (111)
T 2l6j_A           40 GYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA   71 (111)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence            35567788899999999999999999999986

>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}

Probab=85.29  E-value=0.28  Score=40.76  Aligned_cols=47  Identities=17%  Similarity=0.186  Sum_probs=35.4

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHH
Q 047551            3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAA   49 (352)
Q Consensus         3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~   49 (352)
                      +|.......+..|..++..|++++|+..+++|++++|+.. +...+..
T Consensus         1 ~~~~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~   48 (176)
T 2r5s_A            1 SNASPDEQLLKQVSELLQQGEHAQALNVIQTLSDELQSRGDVKLAKAD   48 (176)
T ss_dssp             -----CTTHHHHHHHHHHTTCHHHHHHHHHTSCHHHHTSHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHH
Confidence            4667777789999999999999999999999999999865 3333433

>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1

Probab=85.14  E-value=1.3  Score=34.78  Aligned_cols=32  Identities=13%  Similarity=0.016  Sum_probs=28.1

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +..+|..++..|++++|+..+++|++++|+..
T Consensus        54 ~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~   85 (121)
T 1hxi_A           54 WRSLGLTQAENEKDGLAIIALNHARMLDPKDI   85 (121)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence            45567778899999999999999999999864

>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1

Probab=85.13  E-value=1.5  Score=32.03  Aligned_cols=33  Identities=12%  Similarity=-0.023  Sum_probs=24.4

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      .-+..+|..++..|++++|+..+.+++.++|+.
T Consensus        39 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~   71 (118)
T 1elw_A           39 VLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW   71 (118)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc
Confidence            345666777777788888888888888887764

>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.90  E-value=2.1  Score=33.00  Aligned_cols=34  Identities=12%  Similarity=-0.126  Sum_probs=25.0

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      +.-+..+|..++..|++++|+..+.++++++|+.
T Consensus        65 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~   98 (148)
T 2dba_A           65 AVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD   98 (148)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC
Confidence            4556667777777777777777777777777764

>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A

Probab=84.88  E-value=2  Score=32.32  Aligned_cols=41  Identities=17%  Similarity=0.314  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHHHh
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEK   52 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~~   52 (352)
                      ..+.+++..+..|+++.|...+-+|+++||.+  .+||..+++
T Consensus        19 ~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP--~~LL~i~q~   59 (73)
T 3ax2_A           19 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQP--QQLLQVLQQ   59 (73)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC--HHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCCH--HHHHHHHHh
Confidence            56899999999999999999999999999994  335655543

>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A

Probab=84.53  E-value=2.3  Score=33.49  Aligned_cols=38  Identities=21%  Similarity=0.158  Sum_probs=34.2

Q ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .+.+..+..+|..++..|++++|++.+.+|++++|...
T Consensus        10 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~~~~~   47 (166)
T 1a17_A           10 LKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNA   47 (166)
T ss_dssp             HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCH
T ss_pred             HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCh
Confidence            35678889999999999999999999999999999853

>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A

Probab=84.37  E-value=1.9  Score=36.22  Aligned_cols=42  Identities=12%  Similarity=0.089  Sum_probs=36.2

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHh
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEK   52 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~   52 (352)
                      +.-+|..+++.|||++|+++++..+++.|... +..|...|+.
T Consensus        81 LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~~Ie~  123 (134)
T 3o48_A           81 LYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVED  123 (134)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Confidence            55678889999999999999999999999876 7777777754

>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}

Probab=84.27  E-value=1  Score=32.97  Aligned_cols=32  Identities=16%  Similarity=0.139  Sum_probs=28.9

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      .+..|..++..|++++|++.+++|++++|+..
T Consensus         3 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~   34 (99)
T 2kc7_A            3 QLKTIKELINQGDIENALQALEEFLQTEPVGK   34 (99)
T ss_dssp             THHHHHHHHHHTCHHHHHHHHHHHHHHCSSTH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHHCCCcH
Confidence            46788999999999999999999999999853

>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}

Probab=84.07  E-value=1.6  Score=33.53  Aligned_cols=33  Identities=12%  Similarity=-0.108  Sum_probs=28.9

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      -+..+|..++..|++++|+..+.+|++++|+..
T Consensus        40 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~   72 (126)
T 3upv_A           40 GYSNRAAALAKLMSFPEAIADCNKAIEKDPNFV   72 (126)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcH
Confidence            355678888999999999999999999999864

>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}

Probab=83.91  E-value=2  Score=35.04  Aligned_cols=41  Identities=12%  Similarity=0.184  Sum_probs=28.1

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHH
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACE   51 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~   51 (352)
                      +..+|..++..|++++|+..+.++++++|+.. ...++..+.
T Consensus       118 ~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~i~  159 (177)
T 2e2e_A          118 LMLLASDAFMQANYAQAIELWQKVMDLNSPRINRTQLVESIN  159 (177)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHTCCTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHcccHHHHHHHHHHHHhhCCCCccHHHHHHHHH
Confidence            44566667778888888888888888888654 444555443

>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}

Probab=83.85  E-value=1.7  Score=35.05  Aligned_cols=30  Identities=7%  Similarity=0.044  Sum_probs=14.7

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDN   40 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~   40 (352)
                      +..+|..++..|++++|+..+.+|++++|+
T Consensus        66 ~~nla~~~~~~~~~~~A~~~~~~al~~~p~   95 (162)
T 3rkv_A           66 YANMSQCYLNIGDLHEAEETSSEVLKREET   95 (162)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHHHhcCcHHHHHHHHHHHHhcCCc
Confidence            344444444555555555555555555544

>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1

Probab=83.65  E-value=2.9  Score=34.92  Aligned_cols=37  Identities=14%  Similarity=-0.003  Sum_probs=33.8

Q ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +.+..+..+|..++..|++++|++.+.+|++++|...
T Consensus        36 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~   72 (198)
T 2fbn_A           36 QSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTE   72 (198)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCT
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhccc
Confidence            4677889999999999999999999999999999865

>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A

Probab=83.62  E-value=1.9  Score=34.23  Aligned_cols=32  Identities=13%  Similarity=0.085  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +..+|..++..|++++|+..+.+|++++|+..
T Consensus        55 ~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~   86 (142)
T 2xcb_A           55 FLGLGACRQSLGLYEQALQSYSYGALMDINEP   86 (142)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCT
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc
Confidence            45667888999999999999999999999876

>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}

Probab=83.44  E-value=2.4  Score=32.09  Aligned_cols=32  Identities=22%  Similarity=0.170  Sum_probs=29.7

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      ...+|..++..|++++|+..+.++++++|+..
T Consensus         5 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~   36 (129)
T 2xev_A            5 AYNVAFDALKNGKYDDASQLFLSFLELYPNGV   36 (129)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCSSST
T ss_pred             HHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCc
Confidence            56789999999999999999999999999876

>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1

Probab=83.38  E-value=2.2  Score=33.67  Aligned_cols=41  Identities=17%  Similarity=0.319  Sum_probs=34.6

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCCHHHHHHHHHh
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLSVHEVLAACEK   52 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~~~~ll~~~~~   52 (352)
                      ..+.+++..+..|+++.|+..+-+|+++||.  ..+||.+++.
T Consensus        22 ~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~q--P~~LL~i~q~   62 (95)
T 1om2_A           22 EEIQLGEELLAQGDYEKGVDHLTNAIAVCGQ--PQQLLQVLQQ   62 (95)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHHHHHHHHSC--HHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHHcCC--HHHHHHHHHh
Confidence            5689999999999999999999999999999  4446666543

>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}

Probab=83.05  E-value=1.6  Score=32.85  Aligned_cols=32  Identities=19%  Similarity=-0.093  Sum_probs=19.9

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      -+..+|..++..|++++|++++++|++++|+.
T Consensus        52 ~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~   83 (133)
T 2lni_A           52 LYSNRAACYTKLLEFQLALKDCEECIQLEPTF   83 (133)
T ss_dssp             HHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc
Confidence            34555666666666666666666666666653

>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A

Probab=83.01  E-value=1.9  Score=35.72  Aligned_cols=32  Identities=19%  Similarity=0.079  Sum_probs=28.3

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +..+|..+...|++++|+..+.+|++++|+..
T Consensus        73 ~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~  104 (151)
T 3gyz_A           73 IMGLAAIYQIKEQFQQAADLYAVAFALGKNDY  104 (151)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCC
T ss_pred             HHHHHHHHHHHccHHHHHHHHHHHHhhCCCCc
Confidence            45567778899999999999999999999866

>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1

Probab=83.00  E-value=2.3  Score=36.09  Aligned_cols=42  Identities=12%  Similarity=0.089  Sum_probs=36.0

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHh
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEK   52 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~   52 (352)
                      +.-+|..+++.|||++|+++++..++++|... +..|...++.
T Consensus        80 LYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk~~Ie~  122 (144)
T 1y8m_A           80 LYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVED  122 (144)
T ss_dssp             HHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence            45678899999999999999999999999875 7777777754

>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}

Probab=82.93  E-value=2.2  Score=32.02  Aligned_cols=35  Identities=23%  Similarity=0.160  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      .+..+..+|..++..|++++|++.+.++++++|..
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~   49 (133)
T 2lni_A           15 LALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKD   49 (133)
T ss_dssp             HHHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTC
T ss_pred             cHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc
Confidence            44568889999999999999999999999999975

>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A

Probab=82.70  E-value=3  Score=31.92  Aligned_cols=32  Identities=16%  Similarity=0.119  Sum_probs=28.7

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      ...+|..+++.|++++|+.++++|+++.|+..
T Consensus        49 ~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~~   80 (104)
T 2v5f_A           49 LDYLSYAVYQQGDLDKALLLTKKLLELDPEHQ   80 (104)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHhcCCCCH
Confidence            45678888999999999999999999999975

>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}

Probab=82.69  E-value=3.2  Score=29.93  Aligned_cols=30  Identities=3%  Similarity=0.036  Sum_probs=20.0

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDN   40 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~   40 (352)
                      +..+|..++..|++++|+..+.+|++++|.
T Consensus        43 ~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~   72 (112)
T 2kck_A           43 WLMKGKALYNLERYEEAVDCYNYVINVIED   72 (112)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence            344555666677777777777777777776

>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}

Probab=82.58  E-value=2.6  Score=32.20  Aligned_cols=34  Identities=15%  Similarity=-0.008  Sum_probs=16.6

Q ss_pred             HHHHHHHHHHHHHcCC---HHHHHHHHHHHHhhCCCC
Q 047551            8 ALRCIRIAEEAIASGK---KQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd---~~~A~kf~~kA~~L~P~~   41 (352)
                      +......|+..+-.++   .++|+.++.+|++++|+.
T Consensus         6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~   42 (93)
T 3bee_A            6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYN   42 (93)
T ss_dssp             HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCC
Confidence            3344444544443333   455555555555555553

>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}

Probab=82.34  E-value=2  Score=40.70  Aligned_cols=37  Identities=19%  Similarity=0.193  Sum_probs=29.1

Q ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            5 KDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         5 kdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      ++.|..++.+|..++..|++++|++.+.++++++|+.
T Consensus         3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~   39 (514)
T 2gw1_A            3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALELKEDP   39 (514)
T ss_dssp             HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCCCH
T ss_pred             chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhcCccH
Confidence            4567778888888888888888888888888888763

>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}

Probab=82.17  E-value=1.8  Score=34.95  Aligned_cols=33  Identities=21%  Similarity=0.171  Sum_probs=29.0

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      -+..+|..++..|++++|+..+.+|++++|+..
T Consensus        47 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~   79 (164)
T 3sz7_A           47 YLSNRAAAYSASGQHEKAAEDAELATVVDPKYS   79 (164)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCH
Confidence            356678888999999999999999999999854

>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}

Probab=82.06  E-value=3.2  Score=34.97  Aligned_cols=35  Identities=11%  Similarity=-0.008  Sum_probs=32.9

Q ss_pred             CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 047551            4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLN   38 (352)
Q Consensus         4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~   38 (352)
                      .+++|+.+..+|..++..|++++|+.++.++++++
T Consensus         1 ~~~~a~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~   35 (258)
T 3uq3_A            1 GGSMADKEKAEGNKFYKARQFDEAIEHYNKAWELH   35 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred             CchHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhh
Confidence            36789999999999999999999999999999999

>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1

Probab=81.24  E-value=2.5  Score=31.41  Aligned_cols=31  Identities=13%  Similarity=-0.027  Sum_probs=18.4

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      +..+|..++..|++++|++.+.++++++|+.
T Consensus        49 ~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~   79 (131)
T 2vyi_A           49 FCNRAAAYSKLGNYAGAVQDCERAICIDPAY   79 (131)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHhhchHHHHHHHHHHHhcCccC
Confidence            4455555566666666666666666666653

>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*

Probab=80.85  E-value=2.2  Score=34.48  Aligned_cols=33  Identities=9%  Similarity=-0.015  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      -...+|..++..|++++|+..+++|++++|+..
T Consensus        67 a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~   99 (150)
T 4ga2_A           67 AHRFLGLLYELEENTDKAVECYRRSVELNPTQK   99 (150)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCH
Confidence            355667778899999999999999999999854

>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*

Probab=80.70  E-value=2.7  Score=34.01  Aligned_cols=32  Identities=9%  Similarity=0.034  Sum_probs=28.1

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +..+|..++..|++++|+..+.+|++++|+..
T Consensus        58 ~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~   89 (148)
T 2vgx_A           58 FLGLGACRQAMGQYDLAIHSYSYGAVMDIXEP   89 (148)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCT
T ss_pred             HHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCc
Confidence            44567778999999999999999999999865

>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A

Probab=80.66  E-value=2.7  Score=30.91  Aligned_cols=33  Identities=15%  Similarity=0.207  Sum_probs=22.6

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            9 LRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         9 ~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      .-+..+|..++..|++++|+.+++++++++|..
T Consensus        44 ~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~   76 (125)
T 1na0_A           44 EAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN   76 (125)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc
Confidence            345566677777777777777777777777654

>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1

Probab=80.54  E-value=2.2  Score=35.65  Aligned_cols=29  Identities=21%  Similarity=0.134  Sum_probs=16.9

Q ss_pred             HHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           13 RIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        13 ~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      .+|..++..|++++|++++.+|++++|+.
T Consensus       127 ~lg~~~~~~~~~~~A~~~~~~al~~~p~~  155 (198)
T 2fbn_A          127 KLGVANMYFGFLEEAKENLYKAASLNPNN  155 (198)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHHHHHSTTC
T ss_pred             HHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence            34444555566666666666666666654

>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}

Probab=80.27  E-value=2  Score=34.72  Aligned_cols=32  Identities=9%  Similarity=-0.027  Sum_probs=30.3

Q ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 047551            6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRL   37 (352)
Q Consensus         6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L   37 (352)
                      ..|..+...+..+++.|++++|+..+.+|+++
T Consensus         9 ~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~   40 (162)
T 3rkv_A            9 KSVEALRQKGNELFVQKDYKEAIDAYRDALTR   40 (162)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            56788999999999999999999999999999

>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1

Probab=80.03  E-value=2.3  Score=36.44  Aligned_cols=30  Identities=13%  Similarity=0.041  Sum_probs=23.6

Q ss_pred             CCHHHHHHHHHHHHhhCCCCC-HHHHHHHHH
Q 047551           22 GKKQRALKFIKIAQRLNDNLS-VHEVLAACE   51 (352)
Q Consensus        22 gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~   51 (352)
                      |++++|++.++||+.++|+.. ....|..+.
T Consensus       105 g~~~eA~~~~~kAl~l~P~~~~y~~al~~~~  135 (158)
T 1zu2_A          105 HNFDLATQFFQQAVDEQPDNTHYLKSLEMTA  135 (158)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence            589999999999999999876 344444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	352
d1wjza_	94	a.2.3.1 (A:) CSL-type zinc finger-containing prote	3e-15
d1hdja_	77	a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9	5e-15
d1xbla_	75	a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain	1e-14
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	2e-13
d1fpoa1	76	a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) doma	7e-13
d1fafa_	79	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	3e-12
d1gh6a_	114	a.2.3.1 (A:) Large T antigen, the N-terminal J dom	1e-11
d1iura_	88	a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human	6e-11

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]} Length = 94

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.5 bits (167), Expect = 3e-15
 Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 7/70 (10%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEA-------FKKVCKAFKCL 159
           KD+Y+ILG + S ++ ++++ Y+KL L  HPDK  A             F ++ +A+K L
Sbjct: 16  KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKIL 75

Query: 160 SDDDSRRHYD 169
            ++++++ YD
Sbjct: 76  GNEETKKKYD 85

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]} Length = 77

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 5e-15
 Identities = 34/66 (51%), Positives = 46/66 (69%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRR 166
           KDYY  LG+ R  S EEI++AYR+ +L+ HPDKNK PG+EE FK++ +A+  LSD   R 
Sbjct: 3   KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKRE 62

Query: 167 HYDHVG 172
            +D  G
Sbjct: 63  IFDRYG 68

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 75

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 65.8 bits (160), Expect = 1e-14
 Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)

Query: 107 KDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSR 165
           +DYY ILGV ++    EIRKAY++L++K HPD+N+    +E  FK++ +A++ L+D   R
Sbjct: 3   QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKR 62

Query: 166 RHYDHVG 172
             YD  G
Sbjct: 63  AAYDQYG 69

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 63.0 bits (153), Expect = 2e-13
 Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGS----EEAFKKVCKAFKCLSD 161
            +  +  +G+    + E+++K YRK  L VHPDK          +  F ++  A+    +
Sbjct: 32  GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFEN 91

Query: 162 DDSRRHY 168
              +  Y
Sbjct: 92  QGQKPLY 98

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]} Length = 76

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

 Score = 61.2 bits (148), Expect = 7e-13
 Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 8/70 (11%)

Query: 108 DYYAILGVERSCSV--EEIRKAYRKLSLKVHPDKNKAPGSEE------AFKKVCKAFKCL 159
           DY+ + G+     +  + +   ++ L  + HPDK  +    E          + +A++ L
Sbjct: 2   DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTL 61

Query: 160 SDDDSRRHYD 169
                R  Y 
Sbjct: 62  RHPLMRAEYL 71

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]} Length = 79

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

 Score = 59.2 bits (143), Expect = 3e-12
 Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 5/68 (7%)

Query: 104 KRNKDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSD 161
              +    +L + R        +++AY++ SL +HPDK    GS    +++   +     
Sbjct: 8   ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLWGTFKT 64

Query: 162 DDSRRHYD 169
           +      +
Sbjct: 65  EVYNLRMN 72

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]} Length = 114

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

 Score = 58.7 bits (141), Expect = 1e-11
 Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 5/108 (4%)

Query: 104 KRNKDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSD 161
           + +     +LG+ERS   ++  +RKAY K   + HPDK       E  KK+   +K + D
Sbjct: 5   EESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMED 61

Query: 162 DDSRRHYDHVGLVDEFEHNQRHNVRPRRRRAQHDFFDDELDPDEIFRS 209
                H    G   +      +      +       ++    +E+  S
Sbjct: 62  GVKYAHQPDFGGFWDATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSS 109

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]} Length = 88

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (135), Expect = 6e-11
 Identities = 18/79 (22%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 94  EEHVELIRQIKRNKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA--PGSEEAFKK 151
             H  L+ +    K+  +++         E +K  R+L LK HPDKN      + E FK 
Sbjct: 3   HHHHHLVPRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKH 62

Query: 152 VCKAFKCLSDDDSRRHYDH 170
           +      L           
Sbjct: 63  LQNEINRLEKQAFLDQNAD 81

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	352
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.85
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.78
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.77
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.68
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.63
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.58
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.53
d1nzna_	122	Mitochondria fission protein Fis1 {Human (Homo sap	94.5
d1a17a_	159	Protein phosphatase 5 {Human (Homo sapiens) [TaxId	94.36
d1elra_	128	Hop {Human (Homo sapiens) [TaxId: 9606]}	94.1
d1elwa_	117	Hop {Human (Homo sapiens) [TaxId: 9606]}	93.83
d2c2la1	201	STIP1 homology and U box-containing protein 1, STU	93.66
d1tjca_	95	Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human	93.33
d1tjca_	95	Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human	92.98
d2pqrb1	124	Mitochondria fission protein Fis1 {Baker's yeast (	92.51
d1elwa_	117	Hop {Human (Homo sapiens) [TaxId: 9606]}	89.31
d1hxia_	112	Peroxin pex5 (peroxisomal targeting signal 1 (PTS1	88.16
d1p5qa1	170	FKBP52 (FKBP4), C-terminal domain {Human (Homo sap	86.72
d1ihga1	169	Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}	86.51
d2fbna1	153	Putative 70 kda peptidylprolyl isomerase PFL2275c	86.49
d1p5qa1	170	FKBP52 (FKBP4), C-terminal domain {Human (Homo sap	86.14
d1a17a_	159	Protein phosphatase 5 {Human (Homo sapiens) [TaxId	84.71
d1hh8a_	192	Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {H	84.63
d2hr2a1	156	Hypothetical protein CT2138 {Chlorobium tepidum [T	84.03
d1xnfa_	259	Lipoprotein NlpI {Escherichia coli [TaxId: 562]}	83.91
d1kt1a1	168	FKBP51, C-terminal domain {Monkey (Saimiri bolivie	83.72
d1w3ba_	388	O-GlcNAc transferase p110 subunit, OGT {Human (Hom	83.33
d1fcha_	323	Peroxin pex5 (peroxisomal targeting signal 1 (PTS1	81.93
d2c2la1	201	STIP1 homology and U box-containing protein 1, STU	81.68
d1hxia_	112	Peroxin pex5 (peroxisomal targeting signal 1 (PTS1	81.52

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=2.5e-22  Score=153.40  Aligned_cols=68  Identities=43%  Similarity=0.828  Sum_probs=64.2

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCC-CCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKA-PGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~-~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++||.++||+|||+|++++|||++.. +.+++.|+.|++||+||+||.+|..||.+|.
T Consensus         2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~   70 (75)
T d1xbla_           2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGH   70 (75)
T ss_dssp             CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTT
T ss_pred             CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCc
Confidence            5799999999999999999999999999999999974 5677889999999999999999999999987

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=8.8e-22  Score=150.99  Aligned_cols=71  Identities=48%  Similarity=0.865  Sum_probs=67.6

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCCcchh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGLVDEF  177 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~~~~~  177 (352)
                      .+|||+||||+++|+.++|++||+++++++|||++..+.+.+.|+.|++||+||+||.+|+.||.+|. +++
T Consensus         2 ~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~-~~~   72 (77)
T d1hdja_           2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGE-EGL   72 (77)
T ss_dssp             CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCG-GGC
T ss_pred             CCChHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCHHHHHHHHhhhh-hhh
Confidence            46999999999999999999999999999999999999999999999999999999999999999998 544

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.78  E-value=3.3e-20  Score=152.29  Aligned_cols=65  Identities=34%  Similarity=0.479  Sum_probs=60.4

Q ss_pred             CCCchhhcCcCCCC--CHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a--~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++|  +.++||+|||+||+++||||+++   .++|+.|++||+||+||.+|+.||..|.
T Consensus         7 ~~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~---~e~F~~I~~AY~vLsd~~kR~~YD~~~~   73 (114)
T d1gh6a_           7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG   73 (114)
T ss_dssp             HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh---HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence            57899999999999  78899999999999999999854   5689999999999999999999999876

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.77  E-value=7.3e-20  Score=145.41  Aligned_cols=68  Identities=32%  Similarity=0.648  Sum_probs=62.3

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC-------CcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP-------GSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~-------~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..|||+||||+++|+.++||+||++|++++||||+...       .+++.|+.|++||+||+||.+|+.||....
T Consensus        15 ~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~~   89 (94)
T d1wjza_          15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS   89 (94)
T ss_dssp             CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred             ccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHccC
Confidence            57999999999999999999999999999999998653       367889999999999999999999997654

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.68  E-value=6e-18  Score=130.02  Aligned_cols=65  Identities=20%  Similarity=0.373  Sum_probs=60.5

Q ss_pred             CCCchhhcCcCCCC--CHHHHHHHHHHhhhhhCCCCCCCCCcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSC--SVEEIRKAYRKLSLKVHPDKNKAPGSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a--~~~eIkkaYrkla~~~HPDk~~~~~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      ..+||+||||++++  +.++||+|||++++++|||++   +..++|++|++||++|+|+.+|..||..+.
T Consensus        10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~---g~~e~~~~in~Ay~~L~d~~~r~~~~~~~~   76 (79)
T d1fafa_          10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKG---GSHALMQELNSLWGTFKTEVYNLRMNLGGT   76 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGS---CCHHHHHHHHHHHHHHHHHHHHHTTCCSSC
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccC---CCHHHHHHHHHHHHHHCCHHHHHHHccCCC
Confidence            46899999999988  999999999999999999997   567899999999999999999999998764

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=4.6e-17  Score=123.93  Aligned_cols=65  Identities=18%  Similarity=0.348  Sum_probs=57.2

Q ss_pred             CCchhhcCcCCC--CCHHHHHHHHHHhhhhhCCCCCCCCC------cHHHHHHHHHHHHhcCchhhhhhhccc
Q 047551          107 KDYYAILGVERS--CSVEEIRKAYRKLSLKVHPDKNKAPG------SEEAFKKVCKAFKCLSDDDSRRHYDHV  171 (352)
Q Consensus       107 ~d~Y~iLgv~~~--a~~~eIkkaYrkla~~~HPDk~~~~~------a~e~f~~I~~Ay~vLsd~~kR~~YD~~  171 (352)
                      .|||+||||+++  ++.++||+|||++++++|||+.....      +.+.|+.|++||+||+||.+|+.|+..
T Consensus         1 lnyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll~   73 (76)
T d1fpoa1           1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLS   73 (76)
T ss_dssp             CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred             CChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence            489999999985  45899999999999999999976433      567799999999999999999999853

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.58  E-value=1.3e-16  Score=127.35  Aligned_cols=63  Identities=24%  Similarity=0.449  Sum_probs=58.6

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCCC----cHHHHHHHHHHHHhcCchhhhhhh
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAPG----SEEAFKKVCKAFKCLSDDDSRRHY  168 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~~----a~e~f~~I~~Ay~vLsd~~kR~~Y  168 (352)
                      ..++|++|||...++.++||+|||++++++||||+..+.    +++.|+.|++||++|+||.+|+.|
T Consensus        32 ~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y   98 (98)
T d1nz6a_          32 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY   98 (98)
T ss_dssp             TCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred             cccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence            457899999999999999999999999999999988665    678899999999999999999987

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.53  E-value=1.1e-15  Score=119.45  Aligned_cols=65  Identities=26%  Similarity=0.309  Sum_probs=57.2

Q ss_pred             CCCchhhcCcCCCCCHHHHHHHHHHhhhhhCCCCCCCC--CcHHHHHHHHHHHHhcCchhhhhhhcccCC
Q 047551          106 NKDYYAILGVERSCSVEEIRKAYRKLSLKVHPDKNKAP--GSEEAFKKVCKAFKCLSDDDSRRHYDHVGL  173 (352)
Q Consensus       106 ~~d~Y~iLgv~~~a~~~eIkkaYrkla~~~HPDk~~~~--~a~e~f~~I~~Ay~vLsd~~kR~~YD~~g~  173 (352)
                      -.|+|+||||..+|+.++||+|||+|+++||||+++..  .|+++|+.|++||++|+   ++..||.+++
T Consensus        15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~---~~~~~d~~~~   81 (88)
T d1iura_          15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLE---KQAFLDQNAD   81 (88)
T ss_dssp             HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHH---HHTTCSSSSS
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHH---HHHHhhccch
Confidence            36899999999999999999999999999999998743  47889999999999996   4677787654

>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Mitochondria fission protein Fis1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.50  E-value=0.04  Score=42.89  Aligned_cols=44  Identities=11%  Similarity=0.073  Sum_probs=37.3

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHH
Q 047551            8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACE   51 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~   51 (352)
                      +.-+..+|..+++.|++++|++.+++|++++|+.. +..++..|.
T Consensus        72 ~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~P~~~~A~~l~~~I~  116 (122)
T d1nzna_          72 RDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLID  116 (122)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCcCCHHHHHHHHHHH
Confidence            34467889999999999999999999999999875 777777664

>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Protein phosphatase 5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.36  E-value=0.023  Score=45.28  Aligned_cols=48  Identities=19%  Similarity=0.113  Sum_probs=39.5

Q ss_pred             CCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551            3 GNKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC   50 (352)
Q Consensus         3 ~NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~   50 (352)
                      ++-+.|++.+..|..+++.|++++|+..+.+|++++|+.. +...+..|
T Consensus         5 ~~l~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p~~~~~~~~lg~~   53 (159)
T d1a17a_           5 GALKRAEELKTQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLA   53 (159)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCHHHHHHHhhhccccchhhhhhhhhhHHH
Confidence            3457889999999999999999999999999999999864 33444443

>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.10  E-value=0.047  Score=42.20  Aligned_cols=36  Identities=22%  Similarity=0.227  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +|++..++...++..|++++|+..+.+|+.++|+..
T Consensus         3 ~a~~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p~~~   38 (128)
T d1elra_           3 QALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNM   38 (128)
T ss_dssp             HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccH
Confidence            789999999999999999999999999999999854

>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.047  Score=41.52  Aligned_cols=37  Identities=16%  Similarity=0.190  Sum_probs=34.0

Q ss_pred             HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            6 DEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         6 dEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      |++....+.|..++..|++++|+.++.+|+.++|+..
T Consensus         1 ~~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p~~~   37 (117)
T d1elwa_           1 EQVNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNH   37 (117)
T ss_dssp             CHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             CHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCcch
Confidence            4677888999999999999999999999999999965

>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: STIP1 homology and U box-containing protein 1, STUB1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.66  E-value=0.043  Score=44.19  Aligned_cols=36  Identities=14%  Similarity=-0.038  Sum_probs=32.8

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +|+...+.+..+++.|++++|++++.+|+.++|...
T Consensus         3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p~~~   38 (201)
T d2c2la1           3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVA   38 (201)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCH
T ss_pred             hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCH
Confidence            466788999999999999999999999999999864

>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.33  E-value=0.034  Score=40.99  Aligned_cols=34  Identities=15%  Similarity=0.070  Sum_probs=31.2

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551            8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      |+-|.+++..+++.||+++|+.++++|+++.|..
T Consensus         5 addc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~   38 (95)
T d1tjca_           5 AEDSFELGKVAYTEADYYHTELWMEQALRQLDEG   38 (95)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhh
Confidence            5669999999999999999999999999998764

>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Prolyl 4-hydroxylase alpha-1 subunit, P4HA1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.98  E-value=0.088  Score=38.58  Aligned_cols=40  Identities=15%  Similarity=0.086  Sum_probs=31.5

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC   50 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~   50 (352)
                      .-.+|..+.+.|++++|+..+++|++++|+.+ +..-|..+
T Consensus        49 l~~Lg~~~~~~g~~~~A~~~y~~aL~l~P~~~~a~~Nl~~~   89 (95)
T d1tjca_          49 LDYLSYAVYQQGDLDKALLLTKKLLELDPEHQRANGNLKYF   89 (95)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred             HHHHhhHHHhcCChHHHHHHHHHHHHhCcCCHHHHHHHHHH
Confidence            34568888899999999999999999999976 44334433

>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Mitochondria fission protein Fis1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.51  E-value=0.11  Score=41.27  Aligned_cols=43  Identities=12%  Similarity=0.070  Sum_probs=37.2

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHHHh
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAACEK   52 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~~~   52 (352)
                      .+..+|..+++.||+++|+++++++++++|+.. +..|...|+.
T Consensus        75 ~lY~Lav~yyklgdy~~A~~~~~~~L~ieP~n~qA~~L~~~Ie~  118 (124)
T d2pqrb1          75 CLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKSMVED  118 (124)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhHHHHHHHHHHHHccCCCcHHHHHHHHHHHH
Confidence            456899999999999999999999999999976 6777777754

>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Hop
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.31  E-value=0.26  Score=37.07  Aligned_cols=31  Identities=13%  Similarity=-0.020  Sum_probs=19.1

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      ...+|..++..|++++|+..+.+|++++|+.
T Consensus        40 ~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~   70 (117)
T d1elwa_          40 YSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW   70 (117)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred             hhcccccccccccccccchhhhhHHHhccch
Confidence            4455666666666666666666666666654

>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
species: Trypanosoma brucei [TaxId: 5691]

Probab=88.16  E-value=0.4  Score=35.68  Aligned_cols=41  Identities=5%  Similarity=-0.077  Sum_probs=33.2

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC   50 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~   50 (352)
                      -+..++..+++.|++++|+.++++|++++|+.. +...+..+
T Consensus        18 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~   59 (112)
T d1hxia_          18 NPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLT   59 (112)
T ss_dssp             CHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHhhhcccccccchhhhhhhhh
Confidence            357789999999999999999999999999854 44444444

>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: FKBP52 (FKBP4), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.72  E-value=0.51  Score=37.77  Aligned_cols=28  Identities=18%  Similarity=0.095  Sum_probs=16.1

Q ss_pred             HHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551           13 RIAEEAIASGKKQRALKFIKIAQRLNDN   40 (352)
Q Consensus        13 ~iA~~~l~~gd~~~A~kf~~kA~~L~P~   40 (352)
                      .+|..+++.|++++|+.++.+|++++|+
T Consensus        67 nla~~y~k~~~~~~A~~~~~~al~~~p~   94 (170)
T d1p5qa1          67 NLAMCHLKLQAFSAAIESCNKALELDSN   94 (170)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred             HHHHHHHhhhhcccccchhhhhhhcccc
Confidence            3555555555555555555555555554

>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Cyclophilin 40
species: Cow (Bos taurus) [TaxId: 9913]

Probab=86.51  E-value=0.41  Score=37.96  Aligned_cols=31  Identities=23%  Similarity=0.070  Sum_probs=16.6

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      ...+|..++..|+++.|+..+.+|++++|..
T Consensus       114 ~~~~g~~~~~l~~~~~A~~~~~~al~l~p~n  144 (169)
T d1ihga1         114 LYRRAQGWQGLKEYDQALADLKKAQEIAPED  144 (169)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHhHHHHHHHccCHHHHHHHHHHHHHhCCCC
Confidence            3444555555555555555555555555543

>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Putative 70 kda peptidylprolyl isomerase PFL2275c
species: Plasmodium falciparum [TaxId: 5833]

Probab=86.49  E-value=0.52  Score=37.00  Aligned_cols=27  Identities=11%  Similarity=0.134  Sum_probs=14.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 047551           14 IAEEAIASGKKQRALKFIKIAQRLNDN   40 (352)
Q Consensus        14 iA~~~l~~gd~~~A~kf~~kA~~L~P~   40 (352)
                      +|..+++.|+++.|++++.+|++++|+
T Consensus        73 la~~~~~l~~~~~Al~~~~~al~~~p~   99 (153)
T d2fbna1          73 LATCYNKNKDYPKAIDHASKVLKIDKN   99 (153)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred             HHHHHHHhcccchhhhhhhccccccch
Confidence            444455555555555555555555554

>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: FKBP52 (FKBP4), C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.14  E-value=0.54  Score=37.58  Aligned_cols=35  Identities=17%  Similarity=-0.019  Sum_probs=31.7

Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            8 ALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         8 A~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      |....+.+..++..|+++.|+..+.+|++++|...
T Consensus        13 a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~   47 (170)
T d1p5qa1          13 STIVKERGTVYFKEGKYKQALLQYKKIVSWLEYES   47 (170)
T ss_dssp             HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcc
Confidence            77778889999999999999999999999999753

>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Protein phosphatase 5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.71  E-value=0.63  Score=36.34  Aligned_cols=31  Identities=13%  Similarity=-0.101  Sum_probs=15.6

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      +..+|..++..|++++|+..+++|++++|..
T Consensus        47 ~~~lg~~~~~~~~~~~A~~~~~kal~~~p~~   77 (159)
T d1a17a_          47 YGNRSLAYLRTECYGYALGDATRAIELDKKY   77 (159)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             hhhhHHHHHhccccchHHHHHHHHHHHcccc
Confidence            4444555555555555555555555555543

>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Neutrophil cytosolic factor 2 (NCF-2, p67-phox)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.63  E-value=0.79  Score=37.37  Aligned_cols=33  Identities=15%  Similarity=0.087  Sum_probs=30.7

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      -+..++..++..|++++|++.+.||++++|+..
T Consensus        38 ~~~nlG~~~~~~g~~~~A~~~~~kAl~ldp~~~   70 (192)
T d1hh8a_          38 ICFNIGCMYTILKNMTEAEKAFTRSINRDKHLA   70 (192)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             HHHHHHHHHHHcCCchhHHHHHHHHHHHhhhhh
Confidence            478899999999999999999999999999975

>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: CT2138-like
domain: Hypothetical protein CT2138
species: Chlorobium tepidum [TaxId: 1097]

Probab=84.03  E-value=0.54  Score=36.84  Aligned_cols=36  Identities=14%  Similarity=0.192  Sum_probs=32.0

Q ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551            7 EALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus         7 EA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +|...+..+...+..|++++|+..+.+|+.++|..+
T Consensus         8 ~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~   43 (156)
T d2hr2a1           8 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMP   43 (156)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhh
Confidence            566777789999999999999999999999999754

>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Lipoprotein NlpI
species: Escherichia coli [TaxId: 562]

Probab=83.91  E-value=0.89  Score=37.25  Aligned_cols=46  Identities=13%  Similarity=0.034  Sum_probs=37.2

Q ss_pred             CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHH
Q 047551            4 NKDEALRCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAA   49 (352)
Q Consensus         4 NkdEA~rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~   49 (352)
                      +.+.|.-...++..++..|++++|+..+.+|++++|+.. +...+..
T Consensus        33 ~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~~~~a~~~lg~   79 (259)
T d1xnfa_          33 DDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGI   79 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCCCHHHHhhhch
Confidence            345677788899999999999999999999999999864 3333433

>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: FKBP51, C-terminal domain
species: Monkey (Saimiri boliviensis) [TaxId: 27679]

Probab=83.72  E-value=0.87  Score=36.07  Aligned_cols=29  Identities=14%  Similarity=0.054  Sum_probs=16.8

Q ss_pred             HHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           13 RIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        13 ~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      .+|..++..|++++|+.++++|++++|+.
T Consensus        69 Nla~~~~~l~~~~~Ai~~~~~al~l~p~~   97 (168)
T d1kt1a1          69 NLAMCYLKLREYTKAVECCDKALGLDSAN   97 (168)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             hHHHHHHHhhhcccchhhhhhhhhcccch
Confidence            34555555666666666666666666553

>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: O-GlcNAc transferase p110 subunit, OGT
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.33  E-value=0.42  Score=40.70  Aligned_cols=30  Identities=17%  Similarity=0.242  Sum_probs=16.4

Q ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 047551           12 IRIAEEAIASGKKQRALKFIKIAQRLNDNL   41 (352)
Q Consensus        12 ~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~   41 (352)
                      ..+|..++..|++++|+.++.+|++++|+.
T Consensus        37 ~~la~~~~~~~~~~~A~~~~~~al~~~p~~   66 (388)
T d1w3ba_          37 LLLSSIHFQCRRLDRSAHFSTLAIKQNPLL   66 (388)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence            334445555555555555555555555553

>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.93  E-value=0.9  Score=38.61  Aligned_cols=40  Identities=10%  Similarity=0.092  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC-HHHHHHHH
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS-VHEVLAAC   50 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~-~~~ll~~~   50 (352)
                      .++.|..+++.|++++|++.+++|++++|+.. +...+..+
T Consensus        22 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~   62 (323)
T d1fcha_          22 PFEEGLRRLQEGDLPNAVLLFEAAVQQDPKHMEAWQYLGTT   62 (323)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence            57789999999999999999999999999854 44444433

>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: STIP1 homology and U box-containing protein 1, STUB1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=81.68  E-value=0.9  Score=35.81  Aligned_cols=32  Identities=16%  Similarity=0.014  Sum_probs=28.4

Q ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           11 CIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        11 c~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      +..+|..+++.|++++|+..+.+|+.++|+..
T Consensus        41 ~~~lg~~y~~~~~~~~Ai~~~~~al~l~p~~~   72 (201)
T d2c2la1          41 YTNRALCYLKMQQPEQALADCRRALELDGQSV   72 (201)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCH
T ss_pred             HHhHHHHHhhhhhhhhhhHHHHHHHHhCCCcH
Confidence            45668889999999999999999999999853

>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: TPR-like
family: Tetratricopeptide repeat (TPR)
domain: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
species: Trypanosoma brucei [TaxId: 5691]

Probab=81.52  E-value=1  Score=33.24  Aligned_cols=33  Identities=12%  Similarity=0.010  Sum_probs=28.6

Q ss_pred             HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCC
Q 047551           10 RCIRIAEEAIASGKKQRALKFIKIAQRLNDNLS   42 (352)
Q Consensus        10 rc~~iA~~~l~~gd~~~A~kf~~kA~~L~P~~~   42 (352)
                      -+..+|..++..|++++|+..+.+|++++|+..
T Consensus        52 a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~   84 (112)
T d1hxia_          52 AWRSLGLTQAENEKDGLAIIALNHARMLDPKDI   84 (112)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred             hhhhhhhhhhhhhhHHHhhcccccccccccccc
Confidence            355667788999999999999999999999954