Citrus Sinensis ID: 047564

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------31
Protein Sequence
MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIALALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLLLMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRLEKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTPYKDVLVGQP
Secondary Structure (PSIPRED)
cccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccccHHHHHHccccHHHHHHHHHHHcccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHEccccHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHcccHHHHHHHHcccccccHHHHHHHcccccccccccccccccccccccccccccccccccEEEccc
Coil and Loop (DISEMBL)
MVKLASAretrmygprltrnRAECMNAGLYVFATIVLLGGfaaefsrepKSGLVLLLIALALIMVINVHDLLAHLAGinywfpllGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLLLMVGAILNSREqagwmhhgtellstdWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRLEKLRGGAHERLMQEREGQVPLIIEEQrrrkrpaaEEEAIAVAAGIatasstpvpapastpykdvlvgqp
Flexible Loop (DISEMBL)
mvklasaretrmygprltrnraECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIALALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLLLMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRLEKLRGGAHErlmqeregqvpliieeqrrrkrpaAEEEAIAVAAgiatasstpvpapastpykdvlvgqp
Low Complexity Region (SEG)
MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGlvlllialalimviNVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSllfflailflfiQEEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLLLMVGAILNSREQAGWMHHGTELLSTDWAWlgiigslllfigglTNVVKVFKMQQMDGLRLEKLRGGAHERLMQEREGQVPLIIeeqrrrkrpaaeeeaiavaagiatasstpvpapastpYKDVLVGQP
Disordered region (IsUnstruct)
*****************TRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIALALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLLLMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRLE********************************************************************
Disordered Region (DISOPRED)
**KLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIALALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLLLMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMD*L************************************************************TPYKDVLVGQ*
Disordered Region (DISEMBL)
MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIALALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLLLMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRLEKLRGGAHERLMQEREGQVPLIIEE***********EAIAVAAGIATASSTPVPAPASTPYKDVLVGQP
Disordered Region (DISPRO)
**KLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIALALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLLLMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRLEKLRGGAHERLMQEREGQVPLII*EQRRR***********************VPAPASTPYKDVLVGQ*
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIALALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLLLMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRLEKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTPYKDVLVGQP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
225462749	293	PREDICTED: uncharacterized protein LOC10	0.944	0.996	0.694	1e-119
302143673	306	unnamed protein product [Vitis vinifera]	0.944	0.954	0.694	1e-118
147804914	755	hypothetical protein VITISV_013673 [Viti	0.935	0.382	0.695	1e-118
255564629	297	conserved hypothetical protein [Ricinus	0.957	0.996	0.737	1e-115
224135293	293	predicted protein [Populus trichocarpa]	0.948	1.0	0.721	1e-115
224116886	293	predicted protein [Populus trichocarpa]	0.948	1.0	0.728	1e-115
224110210	296	predicted protein [Populus trichocarpa]	0.954	0.996	0.704	1e-114
356518617	296	PREDICTED: uncharacterized protein LOC10	0.948	0.989	0.620	1e-107
357463843	828	Polypyrimidine tract-binding protein-lik	0.941	0.351	0.633	1e-103
356509293	296	PREDICTED: uncharacterized protein LOC10	0.948	0.989	0.626	1e-101

>gi|225462749|ref|XP_002268340.1| PREDICTED: uncharacterized protein LOC100244979 [Vitis vinifera]

 Score =  434 bits (1115), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/308 (69%), Positives = 246/308 (79%), Gaps = 16/308 (5%)

Query: 1   MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIAL 60
           MVKLASARE+R+YG RL RNR E +NAGLYVFATIVLL GF ++ SR+PKSGL L++I L
Sbjct: 1   MVKLASARESRLYGTRLARNRFEYINAGLYVFATIVLLSGFVSQLSRDPKSGLALMMIGL 60

Query: 61  ALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQE 120
            L+ V+NVHDL+AH+AGI+Y   L+ FD+QL LVEF+VP VQ +G LL FL ILFLF+QE
Sbjct: 61  GLLFVVNVHDLVAHMAGIDYRLGLMEFDLQLGLVEFSVPFVQAMGYLLSFLGILFLFLQE 120

Query: 121 EKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 180
           EK YG FKLE+HALNMLIAGPVLW+LGSIHNSCQIYERADGH+QILQQSVHIPFLMGSLL
Sbjct: 121 EKGYGYFKLERHALNMLIAGPVLWVLGSIHNSCQIYERADGHIQILQQSVHIPFLMGSLL 180

Query: 181 LMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRL 240
            MVG+I+N  EQA  +HHG +LL   W WLG+ GSLL FIGGL NVVKVFKMQQMDGLRL
Sbjct: 181 FMVGSIINCHEQARLVHHGIDLLGMAWVWLGMFGSLLFFIGGLMNVVKVFKMQQMDGLRL 240

Query: 241 EKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTP 300
           EKLRGGA ERL+ EREGQ+PLI+E+QRRRK              I    + PV  P  TP
Sbjct: 241 EKLRGGAQERLIHEREGQIPLILEDQRRRK--------------IHVEETMPVVVP--TP 284

Query: 301 YKDVLVGQ 308
           Y+DVLVG 
Sbjct: 285 YRDVLVGH 292

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143673|emb|CBI22534.3| unnamed protein product [Vitis vinifera]

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/308 (69%), Positives = 246/308 (79%), Gaps = 16/308 (5%)

Query: 1   MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIAL 60
           MVKLASARE+R+YG RL RNR E +NAGLYVFATIVLL GF ++ SR+PKSGL L++I L
Sbjct: 1   MVKLASARESRLYGTRLARNRFEYINAGLYVFATIVLLSGFVSQLSRDPKSGLALMMIGL 60

Query: 61  ALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQE 120
            L+ V+NVHDL+AH+AGI+Y   L+ FD+QL LVEF+VP VQ +G LL FL ILFLF+QE
Sbjct: 61  GLLFVVNVHDLVAHMAGIDYRLGLMEFDLQLGLVEFSVPFVQAMGYLLSFLGILFLFLQE 120

Query: 121 EKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 180
           EK YG FKLE+HALNMLIAGPVLW+LGSIHNSCQIYERADGH+QILQQSVHIPFLMGSLL
Sbjct: 121 EKGYGYFKLERHALNMLIAGPVLWVLGSIHNSCQIYERADGHIQILQQSVHIPFLMGSLL 180

Query: 181 LMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRL 240
            MVG+I+N  EQA  +HHG +LL   W WLG+ GSLL FIGGL NVVKVFKMQQMDGLRL
Sbjct: 181 FMVGSIINCHEQARLVHHGIDLLGMAWVWLGMFGSLLFFIGGLMNVVKVFKMQQMDGLRL 240

Query: 241 EKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTP 300
           EKLRGGA ERL+ EREGQ+PLI+E+QRRRK              I    + PV  P  TP
Sbjct: 241 EKLRGGAQERLIHEREGQIPLILEDQRRRK--------------IHVEETMPVVVP--TP 284

Query: 301 YKDVLVGQ 308
           Y+DVLVG 
Sbjct: 285 YRDVLVGH 292

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147804914|emb|CAN66869.1| hypothetical protein VITISV_013673 [Vitis vinifera]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 212/305 (69%), Positives = 243/305 (79%), Gaps = 16/305 (5%)

Query: 1   MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIAL 60
           MVKLASARE+R+YG RL RNR E +NAGLYVFATIVLL GF ++ SR+PKSGL L++I L
Sbjct: 1   MVKLASARESRLYGTRLARNRFEYINAGLYVFATIVLLSGFVSQLSRDPKSGLALMMIGL 60

Query: 61  ALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQE 120
            L+ V+NVHDL+AH+AGI+Y   L+ FD+QL LVEF+VP VQ +G LL FL ILFLF+QE
Sbjct: 61  GLLFVVNVHDLVAHMAGIDYRLGLMEFDLQLGLVEFSVPFVQAMGYLLSFLGILFLFLQE 120

Query: 121 EKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 180
           EK YG FKLE+HALNMLIAGPVLW+LGSIHNSCQIYERADGH+QILQQSVHIPFLMGSLL
Sbjct: 121 EKGYGYFKLERHALNMLIAGPVLWVLGSIHNSCQIYERADGHIQILQQSVHIPFLMGSLL 180

Query: 181 LMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRL 240
            MVG+I+N  EQA  +HHG +LL   W WLG+ GSLL FIGGL NVVKVFKMQQMDGLRL
Sbjct: 181 FMVGSIINCHEQARLVHHGIDLLGMAWVWLGMFGSLLFFIGGLMNVVKVFKMQQMDGLRL 240

Query: 241 EKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTP 300
           EKLRGGA ERL+ EREGQ+PLI+E+QRRRK              I      PV  P  TP
Sbjct: 241 EKLRGGAQERLIHEREGQIPLILEDQRRRK--------------IHVEEXMPVVVP--TP 284

Query: 301 YKDVL 305
           Y+DVL
Sbjct: 285 YRDVL 289

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255564629|ref|XP_002523309.1| conserved hypothetical protein [Ricinus communis] gi|223537397|gb|EEF39025.1| conserved hypothetical protein [Ricinus communis]

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 227/308 (73%), Positives = 255/308 (82%), Gaps = 12/308 (3%)

Query: 1   MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIAL 60
           MVKLASARE+RMYGPRL RNRAE +NAGLYVFATIVLLGGFAA FS EPKSGLVL+ IAL
Sbjct: 1   MVKLASARESRMYGPRLGRNRAEYINAGLYVFATIVLLGGFAALFSMEPKSGLVLMFIAL 60

Query: 61  ALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQE 120
            LIM +N+HDL AHLAGI+Y  PL+GFD+QLALVEFAVP+VQ LG+LL FL I FLF+QE
Sbjct: 61  GLIMAVNLHDLFAHLAGIDYRLPLMGFDVQLALVEFAVPIVQALGALLLFLGIFFLFLQE 120

Query: 121 EKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 180
           EK YG +KLEKH+LNMLIAGP+LW+LGSIHNSCQIYERADGHVQILQ+SVHIPFLMGSLL
Sbjct: 121 EKRYGYYKLEKHSLNMLIAGPILWILGSIHNSCQIYERADGHVQILQESVHIPFLMGSLL 180

Query: 181 LMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRL 240
            +VGAILN +EQ G  HHG +LL     W+GI G+LLLFIGGLTNVVKVFKMQQ+DGLRL
Sbjct: 181 FLVGAILNIQEQDGLDHHGLQLLGRSLVWMGIFGTLLLFIGGLTNVVKVFKMQQIDGLRL 240

Query: 241 EKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTP 300
           EKLRGGA ERL+Q+REGQ+PLI EE RRRK    E +A+ V              P  TP
Sbjct: 241 EKLRGGAQERLIQQREGQLPLIAEEHRRRKMIIEETKAVPVP------------DPVPTP 288

Query: 301 YKDVLVGQ 308
           YKDVL+GQ
Sbjct: 289 YKDVLIGQ 296

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224135293|ref|XP_002322030.1| predicted protein [Populus trichocarpa] gi|222869026|gb|EEF06157.1| predicted protein [Populus trichocarpa]

 Score =  419 bits (1078), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 223/309 (72%), Positives = 249/309 (80%), Gaps = 16/309 (5%)

Query: 1   MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIAL 60
           MVKLASARE+RMYGPRL RNR E MNAGL VFA IVL+GGF AE S+EPKSGLVLLLIAL
Sbjct: 1   MVKLASARESRMYGPRLARNRGEYMNAGLCVFAAIVLVGGFVAELSKEPKSGLVLLLIAL 60

Query: 61  ALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQE 120
            LIMV+N+HDL+AHLAGI+Y FPL+GFD QLALVEFAVPVVQ  G+LL FL    L  QE
Sbjct: 61  LLIMVVNLHDLVAHLAGIDYRFPLMGFDTQLALVEFAVPVVQASGALLSFLGNPQL--QE 118

Query: 121 EKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 180
            K YG FKLE+HALN+LIAGP LW+LGSIHNSCQIYERADGHVQILQQSV IPFLMGSLL
Sbjct: 119 YKGYGHFKLERHALNLLIAGPALWVLGSIHNSCQIYERADGHVQILQQSVQIPFLMGSLL 178

Query: 181 LMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRL 240
            +VG+ILN  EQAG  HHG +LL   W W GI GSL++FIGGL NVVKVFKMQQ+DGLRL
Sbjct: 179 FLVGSILNIHEQAGRGHHGLKLLGKTWVWTGICGSLMIFIGGLANVVKVFKMQQIDGLRL 238

Query: 241 EKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTP 300
           EKLRGGA ERL+++REG  PLI+EE+RRRK  AAE  A  +              PA+TP
Sbjct: 239 EKLRGGAQERLIRDREGHSPLILEEERRRKMTAAETRAAHI--------------PATTP 284

Query: 301 YKDVLVGQP 309
           Y+DVLVGQP
Sbjct: 285 YRDVLVGQP 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224116886|ref|XP_002331838.1| predicted protein [Populus trichocarpa] gi|222875076|gb|EEF12207.1| predicted protein [Populus trichocarpa]

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 225/309 (72%), Positives = 248/309 (80%), Gaps = 16/309 (5%)

Query: 1   MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIAL 60
           MVKLASARE+RMYGPRL RNR E MNAGL VFA IVL+GGF AE S+EPKSGLVLLLI L
Sbjct: 1   MVKLASARESRMYGPRLARNRGEYMNAGLCVFAAIVLVGGFVAELSKEPKSGLVLLLIGL 60

Query: 61  ALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQE 120
            LIMV+N+HDL+AHLAGI+Y FPL+GFD QLALVEFAVPVV   G+LL FL    L  QE
Sbjct: 61  LLIMVVNLHDLVAHLAGIDYRFPLMGFDTQLALVEFAVPVVLASGALLSFLGNPQL--QE 118

Query: 121 EKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 180
            K YG FKLE+HALN+LIAGP LW+LGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL
Sbjct: 119 YKGYGHFKLERHALNLLIAGPALWVLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 178

Query: 181 LMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRL 240
            +VG+ILN  EQAG  HHG +LL   W W GI GSL++FIGGL NVVKVFKMQQ+DGLRL
Sbjct: 179 FLVGSILNIHEQAGRGHHGLKLLGKTWVWTGICGSLIIFIGGLANVVKVFKMQQIDGLRL 238

Query: 241 EKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTP 300
           EKLRGGA ERL++EREG  PLI+EE+RRRK  AAE  A               P PA+TP
Sbjct: 239 EKLRGGAQERLIREREGHSPLILEEERRRKMIAAETRA--------------TPLPATTP 284

Query: 301 YKDVLVGQP 309
           YKDVLVGQP
Sbjct: 285 YKDVLVGQP 293

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224110210|ref|XP_002333135.1| predicted protein [Populus trichocarpa] gi|222834949|gb|EEE73398.1| predicted protein [Populus trichocarpa]

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 217/308 (70%), Positives = 248/308 (80%), Gaps = 13/308 (4%)

Query: 1   MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIAL 60
           MVKLASARE+RMYG RL++NRAE MNAGLYVFATIVL+GGF AE S+E K GLVLLLIAL
Sbjct: 1   MVKLASARESRMYGARLSKNRAEYMNAGLYVFATIVLIGGFVAELSKETKPGLVLLLIAL 60

Query: 61  ALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQE 120
            LI V+N+HDL+AHLAGI+Y + L+G+D QLALVEFAVPV+Q LG+LL FL ILFLFIQE
Sbjct: 61  LLITVVNLHDLVAHLAGIDYRWRLMGYDTQLALVEFAVPVIQALGTLLSFLGILFLFIQE 120

Query: 121 EKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 180
            K Y  FKLE+HALN+L AGP  W+LGS+HNSCQIYERADGHVQILQQSVHIPFLMGS L
Sbjct: 121 YKGYDHFKLERHALNLLAAGPAFWVLGSLHNSCQIYERADGHVQILQQSVHIPFLMGSSL 180

Query: 181 LMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRL 240
            +VG+ILN REQAGW HHG ELL   W W+G  GSL+ FIGGL +VVKVF+MQQ+D LRL
Sbjct: 181 FLVGSILNIREQAGWGHHGLELLGKTWVWIGFFGSLMFFIGGLADVVKVFEMQQIDVLRL 240

Query: 241 EKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTP 300
           EKLRGGA ERL++EREGQ PLI+ E  RR +  AE              + P+PAP  TP
Sbjct: 241 EKLRGGAQERLVREREGQAPLILAEAERRGKRIAE-----------GTRAAPIPAP--TP 287

Query: 301 YKDVLVGQ 308
           YKDVLVGQ
Sbjct: 288 YKDVLVGQ 295

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518617|ref|XP_003527975.1| PREDICTED: uncharacterized protein LOC100808653 [Glycine max]

 Score =  395 bits (1014), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/308 (62%), Positives = 233/308 (75%), Gaps = 15/308 (4%)

Query: 1   MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIAL 60
           MVKLASAR+ R YGP L +NR E +NAGLY+ A++VL+ G  A+ S   +SGLVL++ AL
Sbjct: 1   MVKLASARDFRTYGPGLAKNRCEYINAGLYLIASVVLVSGLVAQLSSLARSGLVLIIAAL 60

Query: 61  ALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQE 120
            +I+++N+HD  AHL GI++  PL+ FD+QLA VEFAVPV+Q LG+LL FL + FLFIQE
Sbjct: 61  GIILLVNLHDFFAHLVGIDFRLPLMAFDLQLAFVEFAVPVIQMLGTLLTFLGVFFLFIQE 120

Query: 121 EKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 180
           EK YG FKLEKHALNML+AGPVLW++GSIHNSCQIYERADGHVQILQQ V++PFLMGSL 
Sbjct: 121 EKGYGYFKLEKHALNMLVAGPVLWVIGSIHNSCQIYERADGHVQILQQCVNVPFLMGSLS 180

Query: 181 LMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRL 240
            M+ AILN  E++  +HHG  LLS  W WLGI GSL+ FIGGLTN++KVFKMQQM+G+RL
Sbjct: 181 FMLSAILNYHEKSKDIHHGLHLLSGTWIWLGIFGSLMFFIGGLTNLIKVFKMQQMNGIRL 240

Query: 241 EKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTP 300
           EKLRGGAHERL+  RE Q+PLI+E Q        E               T V +P  TP
Sbjct: 241 EKLRGGAHERLLSARERQIPLIMEHQTNISHQPQE---------------TKVTSPLPTP 285

Query: 301 YKDVLVGQ 308
           YKDVL+GQ
Sbjct: 286 YKDVLIGQ 293

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357463843|ref|XP_003602203.1| Polypyrimidine tract-binding protein-like protein [Medicago truncatula] gi|355491251|gb|AES72454.1| Polypyrimidine tract-binding protein-like protein [Medicago truncatula]

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/308 (63%), Positives = 232/308 (75%), Gaps = 17/308 (5%)

Query: 1   MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIAL 60
           MVKLASARE R YGP LTRNR E +NAGLY+FAT++L  GF A+ S E +SGLV+LLIAL
Sbjct: 1   MVKLASAREFRTYGPGLTRNRYEYINAGLYLFATVILCSGFVAQLSPEARSGLVVLLIAL 60

Query: 61  ALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQE 120
            +I+ +N+HD+LAH A I++   LL FD+QL  VEFA PVVQ LGSLL FL ILF FI+E
Sbjct: 61  TIIIFVNLHDILAHFAAIDFRSSLLPFDLQLLFVEFAAPVVQILGSLLIFLGILFTFIEE 120

Query: 121 EKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 180
           EK Y L KLEKH +NML+AGPVLW++GSIHNSCQIYERADGHVQILQQ V+IPFLMGSL 
Sbjct: 121 EKGYYL-KLEKHVVNMLVAGPVLWMVGSIHNSCQIYERADGHVQILQQFVYIPFLMGSLS 179

Query: 181 LMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDG-LR 239
            M+GAILN  +Q+G +HHG  LL   W WLGI GSL+ FIGGLTN++KVFKMQQM+G +R
Sbjct: 180 FMLGAILNHHQQSGIIHHGMNLLGGTWVWLGIFGSLMFFIGGLTNLIKVFKMQQMNGTMR 239

Query: 240 LEKLRGGAHERLMQEREGQVPLII-EEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPAS 298
           LEKLRGGA ERL+  REG+VPLI+   Q    R  +EE  + +              P  
Sbjct: 240 LEKLRGGAQERLVSAREGRVPLILGHHQPMINRQISEETKVDI--------------PLP 285

Query: 299 TPYKDVLV 306
           TPYKDVL+
Sbjct: 286 TPYKDVLL 293

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509293|ref|XP_003523385.1| PREDICTED: uncharacterized protein LOC100775278 [Glycine max]

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 193/308 (62%), Positives = 231/308 (75%), Gaps = 15/308 (4%)

Query: 1   MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFSREPKSGLVLLLIAL 60
           MVKLASAR  R YGP L +NR E +NA LY+ A++VLL G AA+ S E +SGLVL++ AL
Sbjct: 1   MVKLASARVFRTYGPGLAKNRYEYINAALYLIASLVLLSGLAAQLSSEARSGLVLIIAAL 60

Query: 61  ALIMVINVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQE 120
           A+I+++N+HDL AHL GI++  PL+ FD+QLA VEFAVPV+Q  G+LL FL + FLFIQE
Sbjct: 61  AIILLVNLHDLFAHLVGIDFRLPLIAFDLQLAFVEFAVPVIQMFGTLLAFLGVFFLFIQE 120

Query: 121 EKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSLL 180
           EK YG FKLEKHALNML+AGPVLW++GSIHNSCQIYERADGHVQILQQ V+IPFLMGSL 
Sbjct: 121 EKGYGYFKLEKHALNMLVAGPVLWVIGSIHNSCQIYERADGHVQILQQCVYIPFLMGSLS 180

Query: 181 LMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKVFKMQQMDGLRL 240
            M+ AILN  E++  +HHG  LL   W WLGI GSL+ FIGGLTN++KVFKMQQM+G+RL
Sbjct: 181 FMLSAILNYHEKSRDIHHGLHLLGGTWIWLGIFGSLMFFIGGLTNLIKVFKMQQMNGIRL 240

Query: 241 EKLRGGAHERLMQEREGQVPLIIEEQRRRKRPAAEEEAIAVAAGIATASSTPVPAPASTP 300
           EKLRG AHERL+  RE Q+PLI+E Q        E               T V  P  TP
Sbjct: 241 EKLRGEAHERLLSAREAQIPLIMEHQTNISHQPQE---------------TKVTLPLPTP 285

Query: 301 YKDVLVGQ 308
           YKDVL+GQ
Sbjct: 286 YKDVLIGQ 293

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	309
TAIR|locus:2167418	316	AT5G24130 "AT5G24130" [Arabido	0.847	0.829	0.558	3.3e-70

TAIR|locus:2167418 AT5G24130 "AT5G24130" [Arabidopsis thaliana (taxid:3702)]

 Score = 711 (255.3 bits), Expect = 3.3e-70, P = 3.3e-70
 Identities = 147/263 (55%), Positives = 176/263 (66%)

Query:     1 MVKLASARETRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAE-FSREPKSGXXXXXXX 59
             MVKLA+ARE R YGPRL R+RAE +NAGLY+FAT+VL+GGF A  FS EP+SG       
Sbjct:     1 MVKLATAREIRTYGPRLGRSRAEYINAGLYLFATVVLIGGFTATGFSWEPRSGLVLILLA 60

Query:    60 XXXXXXXNVHDLLAHLAGINYWFPLLGFDIQLALVEFAVPVVQTLGSXXXXXXXXXXXXQ 119
                    NVHDL+AHLAGI+Y   L+ +D+QL LVEFAVP+VQ  GS            Q
Sbjct:    61 LVLITAVNVHDLVAHLAGIDYRLRLMEYDLQLGLVEFAVPLVQIAGSVVFFLGIFFVFHQ 120

Query:   120 EEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLMGSL 179
              E   G    E HALN+LIAGP+LWL+GSIHNSCQIYERAD HVQILQQ V+IPFL+GSL
Sbjct:   121 AETKRGYSGREHHALNLLIAGPLLWLIGSIHNSCQIYERADSHVQILQQCVYIPFLVGSL 180

Query:   180 LLMVGAILNSREQAGWMHHGTELLSTDWAWXXXXXXXXXXXXXXTNVVKVFKMQQMDGLR 239
             L +V A+LNS + +G    G +LL   W W               NVVKVF   Q+ GLR
Sbjct:   181 LFLVSAVLNSLDISGSSRSGLKLLGERWIWLGISGAICLFVGGLLNVVKVFNFVQISGLR 240

Query:   240 LEKLRGGAHERLMQEREGQVPLI 262
             LEKLRGGA +RL++ REG +PL+
Sbjct:   241 LEKLRGGAQDRLLEGREGYLPLV 263


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.139   0.424    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      309       232   0.00085  113 3  11 22  0.36    33
                                                     32  0.42    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  183 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.32u 0.09s 14.41t   Elapsed:  00:00:00
  Total cpu time:  14.32u 0.09s 14.41t   Elapsed:  00:00:00
  Start:  Sat May 11 13:45:53 2013   End:  Sat May 11 13:45:53 2013

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=ISM

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00006510001 SubName- Full=Chromosome undetermined scaffold_171, whole genome shotgun sequence; (293 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	309
PF14145	59	YrhK: YrhK-like protein	98.46
PF14145	59	YrhK: YrhK-like protein	98.1
PF09925	145	DUF2157: Predicted membrane protein (DUF2157); Int	90.5

>PF14145 YrhK: YrhK-like protein

Probab=98.46  E-value=3.1e-07  Score=68.99  Aligned_cols=55  Identities=29%  Similarity=0.481  Sum_probs=46.3

Q ss_pred             HHHhhhhhhHHHHHHHHHHHhhhccccccccccccccccccchhHHHHHHHHHHHHHhhhhhhhh
Q 047564          165 ILQQSVHIPFLMGSLLLMVGAILNSREQAGWMHHGTELLSTDWAWLGIIGSLLLFIGGLTNVVKV  229 (309)
Q Consensus       165 iLq~~V~ipfLiGSlLFLVgsIln~~~~~~~~~~~~~lLg~~~aW~~I~GSlLfliGgl~NvlKV  229 (309)
                      .++..-.++.++|+++|++||+++.++.  .        .....|++++||++|+++.+.|.+|-
T Consensus         3 ~ye~~~~~~d~~~~~~FliGSilfl~~~--~--------~~~g~wlFiiGS~~f~i~~~i~~ir~   57 (59)
T PF14145_consen    3 RYEIISTVNDFIGGLLFLIGSILFLPES--L--------YTAGTWLFIIGSILFLIRPIIRLIRE   57 (59)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHcCch--h--------HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4455556899999999999999997762  1        25899999999999999999999874

>PF14145 YrhK: YrhK-like protein

Probab=98.10  E-value=5e-06  Score=62.53  Aligned_cols=54  Identities=22%  Similarity=0.399  Sum_probs=47.9

Q ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhccchhhHHhhhhHHhhhhHHHHHhhhcceee
Q 047564           93 LVEFAVPVVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHALNMLIAGPVLWLLGSIHNSCQ  154 (309)
Q Consensus        93 lvE~~~Pav~~~G~lL~~vg~iffl~q~e~~y~~~~le~hganllIaG~~LwllGSihN~cQ  154 (309)
                      ..|.+.-+...+|+++|++||++|++..        .+.-|.|+|++||++++++++.|..+
T Consensus         3 ~ye~~~~~~d~~~~~~FliGSilfl~~~--------~~~~g~wlFiiGS~~f~i~~~i~~ir   56 (59)
T PF14145_consen    3 RYEIISTVNDFIGGLLFLIGSILFLPES--------LYTAGTWLFIIGSILFLIRPIIRLIR   56 (59)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHcCch--------hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4688888999999999999999999873        36899999999999999999988653

>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function

Probab=90.50  E-value=4.7  Score=34.07  Aligned_cols=114  Identities=25%  Similarity=0.237  Sum_probs=68.0

Q ss_pred             hhhcCcccccchhhhhhhHHHHHHHHHHHhhhhhccC-------CCCcchHHHHHHHHHHHHHhhhhhhhhhhhcccccc
Q 047564           10 TRMYGPRLTRNRAECMNAGLYVFATIVLLGGFAAEFS-------REPKSGLVLLLIALALIMVINVHDLLAHLAGINYWF   82 (309)
Q Consensus        10 ~R~Ygp~la~~RwEyiNAg~Yvfaalll~~G~~a~ls-------~~~~~Gl~l~~val~li~~VN~HDl~AhlAGvdyrl   82 (309)
                      .+.|+.+..+.|  +.+-.++.+|++++..|.+.+..       +..|-++.+..+....+..+-...            
T Consensus        19 ~~~~~~~~~~~~--~~~~~l~~lGall~~~gii~fvA~nW~~i~~~~k~~~~~~~~~~~~~~~~~~~~------------   84 (145)
T PF09925_consen   19 LAFYGERPSRSS--WLARILLYLGALLLGLGIILFVAANWDDIPRLAKLGLLLALLLLSYVGGFWLWR------------   84 (145)
T ss_pred             HHHhhccccchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHh------------
Confidence            456776544444  88999999999999999998855       245666666555555555444322            


Q ss_pred             cccccchhhhHHHHHhHHHHHHHHHHHHHHHHHHHhhhhhhccchhhHHhhhhHHhhhhHHHHHhh
Q 047564           83 PLLGFDIQLALVEFAVPVVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHALNMLIAGPVLWLLGS  148 (309)
Q Consensus        83 ~l~~~D~Ql~lvE~~~Pav~~~G~lL~~vg~iffl~q~e~~y~~~~le~hganllIaG~~LwllGS  148 (309)
                         +-++      ...=+.-.+++++ +.+++.+.-|..+--.. .-+--..|.+.+-|..|+..|
T Consensus        85 ---~~~~------~~~~~l~~l~~~l-~ga~ialigQ~y~~~~~-~~~~~~~W~~~~l~~~~~~~~  139 (145)
T PF09925_consen   85 ---RRSP------RLAEALLLLGAVL-FGALIALIGQIYQTGAD-PWQLFLLWALLALPLAYLLRS  139 (145)
T ss_pred             ---ccCc------HHHHHHHHHHHHH-HHHHHHHHHhHhcCCCc-hHHHHHHHHHHHHHHHHHHCC
Confidence               1111      2223344566666 44555555565311111 124557788888888888765

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	309
d1xioa_	226	Sensory rhodopsin {Anabaena sp. PCC 7120 [TaxId: 1	85.27

>d1xioa_ f.13.1.1 (A:) Sensory rhodopsin {Anabaena sp. PCC 7120 [TaxId: 103690]}

class: Membrane and cell surface proteins and peptides
fold: Family A G protein-coupled receptor-like
superfamily: Family A G protein-coupled receptor-like
family: Bacteriorhodopsin-like
domain: Sensory rhodopsin
species: Anabaena sp. PCC 7120 [TaxId: 103690]

Probab=85.27  E-value=4.7  Score=33.11  Aligned_cols=84  Identities=10%  Similarity=0.046  Sum_probs=48.7

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhhhccchhhHHhhh---hHHhhhhHHHHHhhhcceeeeeeecchhhHHHHhhhhhhHHH
Q 047564          100 VVQTLGSLLFFLAILFLFIQEEKNYGLFKLEKHAL---NMLIAGPVLWLLGSIHNSCQIYERADGHVQILQQSVHIPFLM  176 (309)
Q Consensus       100 av~~~G~lL~~vg~iffl~q~e~~y~~~~le~hga---nllIaG~~LwllGSihN~cQIYErAdghvQiLq~~V~ipfLi  176 (309)
                      ..|-++++.+.++.++|+....+--+- ++..|-.   =++|++-.=+...+-....+...|..-..--.++.+..|.++
T Consensus         6 ~~~wv~~~~m~~~~~~f~~~~~~~~~~-~r~~~~~~~~I~~iA~~~Y~~ma~~~g~~~~~~~~v~~~RYiDW~lTtPlll   84 (226)
T d1xioa_           6 LLHWIYVAGMTIGALHFWSLSRNPRGV-PQYEYLVAMFIPIWSGLAYMAMAIDQGKVEAAGQIAHYARYIDWMVTTPLLL   84 (226)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSCTTC-CHHHHHHHHHHHHHHHHHHHHHHHC---------CTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHccCCcc-chhhHHHHHHHHHHHHHHHHHHHhcCCeeeecCceeeHHHHHHHHHcccHHH
Confidence            477889999999999988654221111 1233434   444555554455554555666667666667899999999998


Q ss_pred             HHHHHHHH
Q 047564          177 GSLLLMVG  184 (309)
Q Consensus       177 GSlLFLVg  184 (309)
                      -.+..+.+
T Consensus        85 ~~l~l~~~   92 (226)
T d1xioa_          85 LSLSWTAM   92 (226)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHHH
Confidence            87766543