Citrus Sinensis ID: 047567

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-
Protein Sequence
MLSFYKSKSLSLFILLIFEFLVNSIKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGTLLSVVYVGWFRIIAAWIELFDNK
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mlsfykskSLSLFILLIFEFLVNSIKSLKWVLVktgeisplmprscryvptcseysMQAYKKYGVVKGTVLTAWRlcrcnplgnsVALFSVLKFIFGTLLSVVYVGWFRIIAAWIELFDNK
Flexible Loop (DISEMBL)
MLSFYKSKSLSLFILLIFEFLVNSIKSLKWVLVKtgeisplmprscrYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGTLLSVVYVGWFRIIAAWIELFDNK
Low Complexity Region (SEG)
MlsfykskslslfillifeflVNSIKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGTLLSVVYVGWFRIIAAWIELFDNK
Disordered region (IsUnstruct)
******SKSLSLFILLIFEFLVNSIKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGTLLSVVYVGWFRIIAAWIELF***
Disordered Region (DISOPRED)
MLSF***KSLSLFILLIFEFLVNSIKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGTLLSVVYVGWFRIIAAWIELFDN*
Disordered Region (DISEMBL)
MLSFYKSKSLSLFILLIFEFLVNSIKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGTLLSVVYVGWFRIIAAWIELFDNK
Disordered Region (DISPRO)
*LSFYKSKSLSLFILLIFEFLVNSIKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGTLLSVVYVGWFRIIAAWIELFDNK
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MLSFYKSKSLSLFILLIFEFLVNSIKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGTLLSVVYVGWFRIIAAWIELFDNK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	121	2.2.26 [Sep-21-2011]
Q9SR32	170	UPF0161 protein At3g09310	yes	no	0.404	0.288	0.877	3e-21
Q11SD8	79	Putative membrane protein	yes	no	0.553	0.848	0.492	1e-11
B0K5N7	69	Putative membrane protein	yes	no	0.371	0.652	0.577	2e-11
B0K8I2	69	Putative membrane protein	yes	no	0.371	0.652	0.577	2e-11
B0T0Z8	84	Putative membrane protein	yes	no	0.396	0.571	0.583	4e-11
Q8R6K5	69	Putative membrane protein	yes	no	0.371	0.652	0.555	6e-11
Q04XE1	84	Putative membrane protein	yes	no	0.388	0.559	0.531	2e-10
Q04W31	84	Putative membrane protein	yes	no	0.388	0.559	0.531	2e-10
Q1IV77	88	Putative membrane protein	yes	no	0.363	0.5	0.636	2e-10
C0QTH8	68	Putative membrane protein	yes	no	0.371	0.661	0.533	3e-10

>sp|Q9SR32|U161_ARATH UPF0161 protein At3g09310 OS=Arabidopsis thaliana GN=At3g09310 PE=2 SV=2

 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query: 37  EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
           EISP++PRSCRYVPTCSEYSM+AYKKYGV+KGTVLT WRLCRCNPLG S
Sbjct: 88  EISPVLPRSCRYVPTCSEYSMEAYKKYGVLKGTVLTTWRLCRCNPLGGS 136

Arabidopsis thaliana (taxid: 3702)

>sp|Q11SD8|YIDD_CYTH3 Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN=CHU_2420 PE=3 SV=1

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 2/69 (2%)

Query: 19 EFLVNSIKSLKWVLVKTGE--ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRL 76
          EF   ++K +  + VK  +  ISPL+P +CRY PTCSEY +QA +KYG +KG  L   R+
Sbjct: 5  EFFTGAVKQVFIIPVKIYQYSISPLLPGACRYTPTCSEYCVQAIEKYGPLKGIWLGTKRI 64

Query: 77 CRCNPLGNS 85
          C CNP G S
Sbjct: 65 CSCNPWGGS 73

Could be involved in insertion of integral membrane proteins into the membrane.

Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) (taxid: 269798)

>sp|B0K5N7|YIDD_THEPX Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter sp. (strain X514) GN=Teth514_2412 PE=3 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 37/45 (82%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          ISP+ PRSCR+ PTCS+YS++A  KYG++KG +++ WR+ RCNP 
Sbjct: 16 ISPMKPRSCRFYPTCSQYSIEAISKYGLLKGGIMSIWRILRCNPF 60

Could be involved in insertion of integral membrane proteins into the membrane.

Thermoanaerobacter sp. (strain X514) (taxid: 399726)

>sp|B0K8I2|YIDD_THEP3 Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=Teth39_2293 PE=3 SV=1

 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 37/45 (82%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          ISP+ PRSCR+ PTCS+YS++A  KYG++KG +++ WR+ RCNP 
Sbjct: 16 ISPMKPRSCRFYPTCSQYSIEAISKYGLLKGGIMSIWRILRCNPF 60

Could be involved in insertion of integral membrane proteins into the membrane.

Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) (taxid: 340099)

>sp|B0T0Z8|YIDD_CAUSK Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain K31) GN=Caul_4526 PE=3 SV=1

 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 28/48 (58%), Positives = 36/48 (75%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
          +SP + R CRY+PTCSEY+ QA K +G +KG+ L   R+CRCNPLG S
Sbjct: 19 LSPFIGRQCRYLPTCSEYAAQALKDHGPLKGSWLAVGRICRCNPLGGS 66

Could be involved in insertion of integral membrane proteins into the membrane.

Caulobacter sp. (strain K31) (taxid: 366602)

>sp|Q8R6K5|YIDD_THETN Putative membrane protein insertion efficiency factor OS=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=TTE2800 PE=3 SV=1

 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 25/45 (55%), Positives = 37/45 (82%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          ISP+ PR+CR+ PTCS+YS++A  KYG++KG +++ WR+ RCNP 
Sbjct: 16 ISPMKPRTCRFYPTCSQYSIEAISKYGLLKGGLMSIWRILRCNPF 60

Could be involved in insertion of integral membrane proteins into the membrane.

Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) (taxid: 273068)

>sp|Q04XE1|YIDD_LEPBL Putative membrane protein insertion efficiency factor OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=LBL_2937 PE=3 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 36/47 (76%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
          ISPL+P +CR+ PTCSEY++QA+++ G  +   L+AWR+ RCNPL  
Sbjct: 16 ISPLLPPACRFTPTCSEYTIQAFRECGFFQAIQLSAWRILRCNPLSQ 62

Could be involved in insertion of integral membrane proteins into the membrane.

Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) (taxid: 355276)

>sp|Q04W31|YIDD_LEPBJ Putative membrane protein insertion efficiency factor OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=LBJ_0146 PE=3 SV=1

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 36/47 (76%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
          ISPL+P +CR+ PTCSEY++QA+++ G  +   L+AWR+ RCNPL  
Sbjct: 16 ISPLLPPACRFTPTCSEYTIQAFRECGFFQAIQLSAWRILRCNPLSQ 62

Could be involved in insertion of integral membrane proteins into the membrane.

Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) (taxid: 355277)

>sp|Q1IV77|YIDD_KORVE Putative membrane protein insertion efficiency factor OS=Koribacter versatilis (strain Ellin345) GN=Acid345_0218 PE=3 SV=1

 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/44 (63%), Positives = 35/44 (79%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
          ISPL+P SCRYVPTCSEY+M+A   +G V+G+VL   RL RC+P
Sbjct: 16 ISPLLPVSCRYVPTCSEYAMEAISIHGAVRGSVLALGRLLRCHP 59

Could be involved in insertion of integral membrane proteins into the membrane.

Koribacter versatilis (strain Ellin345) (taxid: 204669)

>sp|C0QTH8|YIDD_PERMH Putative membrane protein insertion efficiency factor OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=PERMA_0195 PE=3 SV=1

 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 24/45 (53%), Positives = 34/45 (75%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          +SP +P SCRY PTCS Y++Q+ +KYG +KG++   WR+ RCNP 
Sbjct: 16 VSPALPNSCRYYPTCSSYAIQSIEKYGALKGSLKAVWRILRCNPF 60

Could be involved in insertion of integral membrane proteins into the membrane.

Persephonella marina (strain DSM 14350 / EX-H1) (taxid: 123214)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
224140273	97	predicted protein [Populus trichocarpa]	0.404	0.505	0.918	4e-20
115445405	110	Os02g0260400 [Oryza sativa Japonica Grou	0.454	0.5	0.8	5e-20
225440388	143	PREDICTED: UPF0161 protein At3g09310-lik	0.404	0.342	0.897	6e-20
297740358	140	unnamed protein product [Vitis vinifera]	0.404	0.35	0.897	7e-20
242072097	136	hypothetical protein SORBIDRAFT_05g02784	0.396	0.352	0.895	8e-20
255580315	175	conserved hypothetical protein [Ricinus	0.404	0.28	0.918	1e-19
449448622	152	PREDICTED: UPF0161 protein At3g09310-lik	0.404	0.322	0.877	1e-19
42563869	170	uncharacterized protein [Arabidopsis tha	0.404	0.288	0.877	1e-19
47497897	130	unknown protein [Oryza sativa Japonica G	0.396	0.369	0.895	2e-19
218190446	130	hypothetical protein OsI_06645 [Oryza sa	0.396	0.369	0.895	2e-19

>gi|224140273|ref|XP_002323507.1| predicted protein [Populus trichocarpa] gi|222868137|gb|EEF05268.1| predicted protein [Populus trichocarpa]

 Score =  102 bits (253), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 45/49 (91%), Positives = 47/49 (95%)

Query: 37 EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
          EISPL+P SCRYVPTCSEYSM+AYKKYGVVKGTVLTAWRLCRCNPLG S
Sbjct: 32 EISPLLPNSCRYVPTCSEYSMEAYKKYGVVKGTVLTAWRLCRCNPLGGS 80

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|115445405|ref|NP_001046482.1| Os02g0260400 [Oryza sativa Japonica Group] gi|47497896|dbj|BAD20080.1| unknown protein [Oryza sativa Japonica Group] gi|47497920|dbj|BAD20126.1| unknown protein [Oryza sativa Japonica Group] gi|113536013|dbj|BAF08396.1| Os02g0260400 [Oryza sativa Japonica Group] gi|215717104|dbj|BAG95467.1| unnamed protein product [Oryza sativa Japonica Group]

 Score =  101 bits (252), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 44/55 (80%), Positives = 47/55 (85%)

Query: 30 WVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
          +     GEISPL+P SCRYVPTCSEYSMQAYKKYGV KGT+LTAWRLCRCNPLG 
Sbjct: 39 YCAADEGEISPLLPSSCRYVPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGG 93

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440388|ref|XP_002268102.1| PREDICTED: UPF0161 protein At3g09310-like [Vitis vinifera]

 Score =  101 bits (251), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 44/49 (89%), Positives = 46/49 (93%)

Query: 37  EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
           EISPL+P SCRYVPTCSEYSM+AYKKYGVVKGTVLT WRLCRCNPLG S
Sbjct: 79  EISPLLPNSCRYVPTCSEYSMEAYKKYGVVKGTVLTTWRLCRCNPLGGS 127

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740358|emb|CBI30540.3| unnamed protein product [Vitis vinifera]

 Score =  100 bits (250), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 44/49 (89%), Positives = 46/49 (93%)

Query: 37  EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
           EISPL+P SCRYVPTCSEYSM+AYKKYGVVKGTVLT WRLCRCNPLG S
Sbjct: 76  EISPLLPNSCRYVPTCSEYSMEAYKKYGVVKGTVLTTWRLCRCNPLGGS 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242072097|ref|XP_002451325.1| hypothetical protein SORBIDRAFT_05g027840 [Sorghum bicolor] gi|241937168|gb|EES10313.1| hypothetical protein SORBIDRAFT_05g027840 [Sorghum bicolor]

 Score =  100 bits (250), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 43/48 (89%), Positives = 46/48 (95%)

Query: 37  EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
           EISPL+P SCRYVPTCSEYSMQAYK+YGVVKGT+LTAWRLCRCNPLG 
Sbjct: 72  EISPLLPSSCRYVPTCSEYSMQAYKRYGVVKGTILTAWRLCRCNPLGG 119

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580315|ref|XP_002530986.1| conserved hypothetical protein [Ricinus communis] gi|223529438|gb|EEF31398.1| conserved hypothetical protein [Ricinus communis]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 45/49 (91%), Positives = 46/49 (93%)

Query: 37  EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
           EISPL+P SCRYVPTCSEYSM AYKKYGVVKGTVLTAWRLCRCNPLG S
Sbjct: 111 EISPLLPNSCRYVPTCSEYSMIAYKKYGVVKGTVLTAWRLCRCNPLGGS 159

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448622|ref|XP_004142065.1| PREDICTED: UPF0161 protein At3g09310-like [Cucumis sativus] gi|449520217|ref|XP_004167130.1| PREDICTED: UPF0161 protein At3g09310-like [Cucumis sativus]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/49 (87%), Positives = 46/49 (93%)

Query: 37  EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
           EISPL+P SCRY+PTCSEYSMQAYKKYGV KGT+LTAWRLCRCNPLG S
Sbjct: 86  EISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGS 134

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|42563869|ref|NP_187542.2| uncharacterized protein [Arabidopsis thaliana] gi|209572699|sp|Q9SR32.2|U161_ARATH RecName: Full=UPF0161 protein At3g09310 gi|89274167|gb|ABD65604.1| At3g09310 [Arabidopsis thaliana] gi|332641228|gb|AEE74749.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  100 bits (249), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query: 37  EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
           EISP++PRSCRYVPTCSEYSM+AYKKYGV+KGTVLT WRLCRCNPLG S
Sbjct: 88  EISPVLPRSCRYVPTCSEYSMEAYKKYGVLKGTVLTTWRLCRCNPLGGS 136

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|47497897|dbj|BAD20081.1| unknown protein [Oryza sativa Japonica Group] gi|47497921|dbj|BAD20127.1| unknown protein [Oryza sativa Japonica Group]

 Score = 99.8 bits (247), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/48 (89%), Positives = 45/48 (93%)

Query: 37  EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
           EISPL+P SCRYVPTCSEYSMQAYKKYGV KGT+LTAWRLCRCNPLG 
Sbjct: 66  EISPLLPSSCRYVPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGG 113

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218190446|gb|EEC72873.1| hypothetical protein OsI_06645 [Oryza sativa Indica Group]

 Score = 99.4 bits (246), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 43/48 (89%), Positives = 45/48 (93%)

Query: 37  EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
           EISPL+P SCRYVPTCSEYSMQAYKKYGV KGT+LTAWRLCRCNPLG 
Sbjct: 66  EISPLLPSSCRYVPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGG 113

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	121
TAIR|locus:2083494	170	AT3G09310 "AT3G09310" [Arabido	0.404	0.288	0.877	2.4e-21
UNIPROTKB|P45649	88	CBU_1919 "Putative membrane pr	0.479	0.659	0.466	3.2e-10
TIGR_CMR|CBU_1919	88	CBU_1919 "conserved hypothetic	0.479	0.659	0.466	3.2e-10
UNIPROTKB|P0A8C8	85	yidD "inner membrane protein i	0.371	0.529	0.488	4.7e-09
UNIPROTKB|Q81KF2	78	BAS4688 "Putative membrane pro	0.363	0.564	0.477	9.7e-09
TIGR_CMR|BA_5048	78	BA_5048 "conserved hypothetica	0.363	0.564	0.477	9.7e-09
UNIPROTKB|Q47U34	82	CPS_5051 "Putative membrane pr	0.388	0.573	0.446	2.6e-08
UNIPROTKB|Q5LW07	85	SPO0536 "Putative membrane pro	0.380	0.541	0.478	2.6e-08
TIGR_CMR|CPS_5051	82	CPS_5051 "conserved hypothetic	0.388	0.573	0.446	2.6e-08
TIGR_CMR|SPO_0536	85	SPO_0536 "conserved hypothetic	0.380	0.541	0.478	2.6e-08

TAIR|locus:2083494 AT3G09310 "AT3G09310" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 43/49 (87%), Positives = 47/49 (95%)

Query:    37 EISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
             EISP++PRSCRYVPTCSEYSM+AYKKYGV+KGTVLT WRLCRCNPLG S
Sbjct:    88 EISPVLPRSCRYVPTCSEYSMEAYKKYGVLKGTVLTTWRLCRCNPLGGS 136

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|P45649 CBU_1919 "Putative membrane protein insertion efficiency factor" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 28/60 (46%), Positives = 43/60 (71%)

Query:    24 SIKSLKWVLVKTGE--ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
             +I++L   L+K+    ISP++  SCR+ P+CS Y+  A K++GV+KG+ LT WRL RC+P
Sbjct:    12 AIQTLLLGLIKSYRYLISPVLMSSCRFYPSCSCYAETALKRFGVIKGSGLTVWRLLRCHP 71

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CBU_1919 CBU_1919 "conserved hypothetical protein TIGR00278" [Coxiella burnetii RSA 493 (taxid:227377)]

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 28/60 (46%), Positives = 43/60 (71%)

Query:    24 SIKSLKWVLVKTGE--ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
             +I++L   L+K+    ISP++  SCR+ P+CS Y+  A K++GV+KG+ LT WRL RC+P
Sbjct:    12 AIQTLLLGLIKSYRYLISPVLMSSCRFYPSCSCYAETALKRFGVIKGSGLTVWRLLRCHP 71

GO:0008150 "biological_process" evidence=ND

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

UNIPROTKB|P0A8C8 yidD "inner membrane protein insertion factor" [Escherichia coli K-12 (taxid:83333)]

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 22/45 (48%), Positives = 34/45 (75%)

Query:    38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
             ISPL+   CR+ PTCS Y ++A +++GV+KG+ LT  R+ +C+PL
Sbjct:    23 ISPLLGPHCRFTPTCSSYGIEALRRFGVIKGSWLTVKRVLKCHPL 67

GO:0051205 "protein insertion into membrane" evidence=IMP

GO:0032977 "membrane insertase activity" evidence=IMP

GO:0005887 "integral to plasma membrane" evidence=IDA

UNIPROTKB|Q81KF2 BAS4688 "Putative membrane protein insertion efficiency factor" [Bacillus anthracis (taxid:1392)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 21/44 (47%), Positives = 32/44 (72%)

Query:    38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
             ISP+ P +CR+ PTCS Y ++A++K+G  KG  LT  R+ +C+P
Sbjct:    16 ISPMTPPTCRFYPTCSHYGLEAFQKHGAFKGFWLTCKRILKCHP 59

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|BA_5048 BA_5048 "conserved hypothetical protein TIGR00278" [Bacillus anthracis str. Ames (taxid:198094)]

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 21/44 (47%), Positives = 32/44 (72%)

Query:    38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
             ISP+ P +CR+ PTCS Y ++A++K+G  KG  LT  R+ +C+P
Sbjct:    16 ISPMTPPTCRFYPTCSHYGLEAFQKHGAFKGFWLTCKRILKCHP 59

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q47U34 CPS_5051 "Putative membrane protein insertion efficiency factor" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 21/47 (44%), Positives = 34/47 (72%)

Query:    38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
             ISPL+  +CR+ P+CS Y+ +A  ++GV+KG  L + R+ RC+PL +
Sbjct:    23 ISPLLGSNCRFTPSCSAYATEAINRFGVIKGGWLASKRILRCHPLND 69

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5LW07 SPO0536 "Putative membrane protein insertion efficiency factor" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query:    39 SPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
             SP +  +CRY PTCS Y+++A +K+G ++G+ L A R+ RC+PLG+
Sbjct:    20 SPWVGFNCRYQPTCSAYALEALEKHGALRGSWLAARRIGRCHPLGS 65

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|CPS_5051 CPS_5051 "conserved hypothetical protein TIGR00278" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 21/47 (44%), Positives = 34/47 (72%)

Query:    38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
             ISPL+  +CR+ P+CS Y+ +A  ++GV+KG  L + R+ RC+PL +
Sbjct:    23 ISPLLGSNCRFTPSCSAYATEAINRFGVIKGGWLASKRILRCHPLND 69

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

TIGR_CMR|SPO_0536 SPO_0536 "conserved hypothetical protein TIGR00278" [Ruegeria pomeroyi DSS-3 (taxid:246200)]

 Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
 Identities = 22/46 (47%), Positives = 35/46 (76%)

Query:    39 SPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
             SP +  +CRY PTCS Y+++A +K+G ++G+ L A R+ RC+PLG+
Sbjct:    20 SPWVGFNCRYQPTCSAYALEALEKHGALRGSWLAARRIGRCHPLGS 65

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SR32	U161_ARATH	No assigned EC number	0.8775	0.4049	0.2882	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	Sb05g027840.1	hypothetical protein (136 aa)
		(Sorghum bicolor)
Predicted Functional Partners:
	Sb03g025760.1	hypothetical protein (142 aa)	•			•			•		0.838
	Sb07g020060.1	hypothetical protein (549 aa)	•						•		0.830
	Sb03g006010.1	annotation not avaliable (456 aa)	•						•		0.806
	Sb03g046560.1	hypothetical protein (714 aa)	•						•		0.768
	Sb10g008640.1	hypothetical protein (190 aa)	•						•		0.726
	Sb09g025020.1	annotation not avaliable (282 aa)	•								0.581
	Sb03g003010.1	hypothetical protein (558 aa)	•						•		0.566
	Sb03g010630.1	hypothetical protein (729 aa)	•						•		0.563
	Sb10g025480.1	hypothetical protein (142 aa)	•								0.537
	atpI	ATP synthase CF0 subunit IV ; Key component of the proton channel; it plays a direct role in th [...] (247 aa)	•								0.529

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	121
pfam01809	68	pfam01809, Haemolytic, Haemolytic domain	6e-24
PRK00041	93	PRK00041, PRK00041, hypothetical protein; Validate	2e-19
COG0759	92	COG0759, COG0759, Uncharacterized conserved protei	2e-19
PRK14387	84	PRK14387, PRK14387, hypothetical protein; Provisio	2e-17
PRK14391	84	PRK14391, PRK14391, hypothetical protein; Provisio	6e-17
PRK14369	119	PRK14369, PRK14369, hypothetical protein; Provisio	1e-15
PRK14373	73	PRK14373, PRK14373, hypothetical protein; Provisio	3e-15
PRK14382	68	PRK14382, PRK14382, hypothetical protein; Provisio	4e-15
PRK14370	120	PRK14370, PRK14370, hypothetical protein; Provisio	5e-15
PRK14386	106	PRK14386, PRK14386, hypothetical protein; Provisio	6e-15
PRK14383	84	PRK14383, PRK14383, hypothetical protein; Provisio	2e-14
PRK14375	70	PRK14375, PRK14375, hypothetical protein; Provisio	4e-14
TIGR00278	75	TIGR00278, TIGR00278, putative membrane protein in	1e-13
PRK14378	103	PRK14378, PRK14378, hypothetical protein; Provisio	2e-13
PRK14379	95	PRK14379, PRK14379, hypothetical protein; Provisio	1e-12
PRK14372	97	PRK14372, PRK14372, hypothetical protein; Provisio	7e-12
PRK14380	81	PRK14380, PRK14380, hypothetical protein; Provisio	1e-11
PRK14389	98	PRK14389, PRK14389, hypothetical protein; Provisio	3e-11
PRK14384	56	PRK14384, PRK14384, hypothetical protein; Provisio	6e-11
PRK14381	103	PRK14381, PRK14381, hypothetical protein; Provisio	4e-10
PRK14371	81	PRK14371, PRK14371, hypothetical protein; Provisio	1e-09
PRK14388	82	PRK14388, PRK14388, hypothetical protein; Provisio	5e-09
PRK14376	176	PRK14376, PRK14376, hypothetical protein; Provisio	8e-08
PRK14377	104	PRK14377, PRK14377, hypothetical protein; Provisio	1e-07
PRK14390	63	PRK14390, PRK14390, hypothetical protein; Provisio	9e-07
PRK14385	96	PRK14385, PRK14385, hypothetical protein; Provisio	9e-06

>gnl|CDD|201984 pfam01809, Haemolytic, Haemolytic domain

 Score = 86.7 bits (216), Expect = 6e-24
 Identities = 22/46 (47%), Positives = 33/46 (71%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLG 83
          ISPL+  SCR+ PTCSEY+++A +++G +KG  L   R+ RC+P  
Sbjct: 16 ISPLLGPSCRFYPTCSEYAIEAIERHGALKGGWLALKRILRCHPFH 61

This domain has haemolytic activity. It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues. Length = 68

>gnl|CDD|178815 PRK00041, PRK00041, hypothetical protein; Validated

 Score = 75.8 bits (187), Expect = 2e-19
 Identities = 23/46 (50%), Positives = 34/46 (73%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLG 83
          ISPL+  SCR+ PTCSEY+++A  ++G+ KG+ LT  R+ RC+P  
Sbjct: 23 ISPLLGPSCRFYPTCSEYAIEAIARHGLWKGSWLTLKRILRCHPFH 68

Length = 93

>gnl|CDD|223830 COG0759, COG0759, Uncharacterized conserved protein [Function unknown]

 Score = 75.8 bits (187), Expect = 2e-19
 Identities = 26/46 (56%), Positives = 36/46 (78%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLG 83
          ISPL+P SCR+ PTCSEY+++A KK+G++KG  LT  R+ RC+P  
Sbjct: 21 ISPLLPPSCRFYPTCSEYAIEALKKHGLLKGLWLTLKRILRCHPFH 66

Length = 92

>gnl|CDD|184655 PRK14387, PRK14387, hypothetical protein; Provisional

 Score = 70.7 bits (173), Expect = 2e-17
 Identities = 25/48 (52%), Positives = 34/48 (70%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
          +SPL+ R CR+ P+CSEY+  A K +G +KG+ L   R+CRCNP G S
Sbjct: 19 LSPLIGRQCRFTPSCSEYTAAALKDHGPLKGSWLGLRRICRCNPFGGS 66

Length = 84

>gnl|CDD|172867 PRK14391, PRK14391, hypothetical protein; Provisional

 Score = 69.7 bits (170), Expect = 6e-17
 Identities = 25/45 (55%), Positives = 35/45 (77%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          ISPL+P +CR+ PTCSEY+ QA+++ G  +   L+AWR+ RCNPL
Sbjct: 16 ISPLLPPACRFTPTCSEYAAQAFQECGFFQAIQLSAWRILRCNPL 60

Length = 84

>gnl|CDD|184650 PRK14369, PRK14369, hypothetical protein; Provisional

 Score = 67.4 bits (164), Expect = 1e-15
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 6/61 (9%)

Query: 21 LVNSIKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCN 80
          L+  IK  +W       ISPL+   C+Y P+CS Y   A  ++G +KGT LTAWR+ RCN
Sbjct: 5  LLALIKLYQWT------ISPLLGPVCKYYPSCSHYGYTAIDRHGAIKGTALTAWRILRCN 58

Query: 81 P 81
          P
Sbjct: 59 P 59

Length = 119

>gnl|CDD|172849 PRK14373, PRK14373, hypothetical protein; Provisional

 Score = 65.0 bits (158), Expect = 3e-15
 Identities = 26/46 (56%), Positives = 33/46 (71%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLG 83
          ISPL+P  CRY PTCS+Y+++A KKYG  KG  L   R+ RC+P G
Sbjct: 20 ISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGGRLAIKRIARCHPFG 65

Length = 73

>gnl|CDD|172858 PRK14382, PRK14382, hypothetical protein; Provisional

 Score = 64.4 bits (157), Expect = 4e-15
 Identities = 24/44 (54%), Positives = 33/44 (75%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
          ISPL P SCR+ PTCS Y++ + +KYG +KG++   WR+ RCNP
Sbjct: 16 ISPLYPSSCRFYPTCSTYAILSIEKYGALKGSLKAFWRILRCNP 59

Length = 68

>gnl|CDD|184651 PRK14370, PRK14370, hypothetical protein; Provisional

 Score = 65.6 bits (160), Expect = 5e-15
 Identities = 25/46 (54%), Positives = 32/46 (69%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLG 83
          ISP++P  CRY PTCS Y  QA   +GV KG++L   R+ RC+PLG
Sbjct: 24 ISPILPARCRYYPTCSNYGKQAIAWHGVGKGSLLLLKRIGRCHPLG 69

Length = 120

>gnl|CDD|172862 PRK14386, PRK14386, hypothetical protein; Provisional

 Score = 65.1 bits (158), Expect = 6e-15
 Identities = 24/48 (50%), Positives = 37/48 (77%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNS 85
          ISPL+   CRY+PTCS+Y+++A + +G +KG  L++ R+CRC+P G S
Sbjct: 16 ISPLLGPRCRYIPTCSQYALEALQTHGAIKGVWLSSKRICRCHPWGGS 63

Length = 106

>gnl|CDD|237698 PRK14383, PRK14383, hypothetical protein; Provisional

 Score = 63.1 bits (153), Expect = 2e-14
 Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 37 EISPLMPR-SCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
           +SP  P  +CR+ PTCS+Y+++A +++G +KG  L  WR+ RCNPL
Sbjct: 18 VLSPRKPAPTCRFSPTCSQYAVEAIERHGALKGGWLALWRVLRCNPL 64

Length = 84

>gnl|CDD|172851 PRK14375, PRK14375, hypothetical protein; Provisional

 Score = 61.9 bits (150), Expect = 4e-14
 Identities = 26/45 (57%), Positives = 34/45 (75%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          ISP +P  CRY PTCSEY+++A K +G++KG  LT  RL RC+PL
Sbjct: 10 ISPFIPARCRYYPTCSEYALEALKTHGILKGLYLTTRRLLRCHPL 54

Length = 70

>gnl|CDD|232903 TIGR00278, TIGR00278, putative membrane protein insertion efficiency factor

 Score = 60.6 bits (147), Expect = 1e-13
 Identities = 24/45 (53%), Positives = 33/45 (73%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          ISP  P SCR+ PTCS+Y+++A K +G +KG  LT  R+ RC+PL
Sbjct: 12 ISPFFPPSCRFYPTCSQYAIEALKTHGFLKGGWLTLKRILRCHPL 56

This model describes a family, YidD, of small, non-essential proteins now suggested to improve YidC-dependent inner membrane protein insertion. A related protein is found in the temperature phage HP1 of Haemophilus influenzae. Annotation of some members of this family as hemolysins appears to represent propagation from an unpublished GenBank submission, L36462, attributed to Aeromonas hydrophila but a close match to E. coli [Hypothetical proteins, Conserved]. Length = 75

>gnl|CDD|237696 PRK14378, PRK14378, hypothetical protein; Provisional

 Score = 61.1 bits (148), Expect = 2e-13
 Identities = 19/44 (43%), Positives = 30/44 (68%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
          +SP     CRY P+CS Y ++A +++G++ G  L  WR+CRC+P
Sbjct: 27 VSPFYGDVCRYYPSCSAYGLEAVQEHGLIFGGYLAVWRVCRCHP 70

Length = 103

>gnl|CDD|237697 PRK14379, PRK14379, hypothetical protein; Provisional

 Score = 59.1 bits (143), Expect = 1e-12
 Identities = 23/45 (51%), Positives = 31/45 (68%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          ISP++P SCRY PTCS Y + A KK+G + G ++   R+ RCNP 
Sbjct: 16 ISPILPPSCRYYPTCSSYMIDALKKHGPILGLIMGLARILRCNPF 60

Length = 95

>gnl|CDD|172848 PRK14372, PRK14372, hypothetical protein; Provisional

 Score = 56.9 bits (137), Expect = 7e-12
 Identities = 20/44 (45%), Positives = 28/44 (63%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
          IS   P  C+Y P+CS Y+++A +++G  KG VL   RL RC P
Sbjct: 12 ISANTPPCCKYYPSCSNYAIEAIERFGAFKGGVLAVLRLLRCRP 55

Length = 97

>gnl|CDD|184654 PRK14380, PRK14380, hypothetical protein; Provisional

 Score = 55.7 bits (134), Expect = 1e-11
 Identities = 24/44 (54%), Positives = 31/44 (70%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
          ISPL+   CRY P+CSEY+  A K YGV+KG ++   RL RC+P
Sbjct: 23 ISPLITPCCRYYPSCSEYADSAIKHYGVIKGLLMALNRLSRCHP 66

Length = 81

>gnl|CDD|184656 PRK14389, PRK14389, hypothetical protein; Provisional

 Score = 55.3 bits (133), Expect = 3e-11
 Identities = 21/44 (47%), Positives = 31/44 (70%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
          +SP +  +CR+ PTCS YS+QA +++G   G+ LT  RL RC+P
Sbjct: 17 LSPWLGSACRFEPTCSAYSLQALEQHGAAAGSYLTLRRLARCHP 60

Length = 98

>gnl|CDD|172860 PRK14384, PRK14384, hypothetical protein; Provisional

 Score = 53.5 bits (128), Expect = 6e-11
 Identities = 21/38 (55%), Positives = 29/38 (76%)

Query: 45 SCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          SCR+ P+CS Y+  A K++GV+KG+ LT WRL RC+P 
Sbjct: 3  SCRFYPSCSCYAETALKRFGVIKGSGLTVWRLLRCHPF 40

Length = 56

>gnl|CDD|172857 PRK14381, PRK14381, hypothetical protein; Provisional

 Score = 52.6 bits (126), Expect = 4e-10
 Identities = 20/44 (45%), Positives = 30/44 (68%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
          ISPL+   CR+ P+CS+Y++QA K +G + G  LT  R+ +C P
Sbjct: 26 ISPLLGSPCRFFPSCSQYALQALKHHGCIMGLWLTIKRIGKCGP 69

Length = 103

>gnl|CDD|172847 PRK14371, PRK14371, hypothetical protein; Provisional

 Score = 51.1 bits (122), Expect = 1e-09
 Identities = 20/44 (45%), Positives = 31/44 (70%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
          ISPLM   CR+ P+CS Y+ +A + +G+++G  L+  RL RC+P
Sbjct: 16 ISPLMASHCRFYPSCSCYAYEAIENHGLLRGGWLSVRRLGRCHP 59

Length = 81

>gnl|CDD|172864 PRK14388, PRK14388, hypothetical protein; Provisional

 Score = 49.1 bits (117), Expect = 5e-09
 Identities = 20/47 (42%), Positives = 30/47 (63%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGN 84
          ISPL+  +CR+ PTCSEY+ +A   +G +KG   T  R+ +C P  +
Sbjct: 16 ISPLLGNNCRFHPTCSEYAKEAISMHGSIKGLWFTFKRIIKCQPFCD 62

Length = 82

>gnl|CDD|237695 PRK14376, PRK14376, hypothetical protein; Provisional

 Score = 47.6 bits (113), Expect = 8e-08
 Identities = 17/37 (45%), Positives = 26/37 (70%)

Query: 46  CRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
           CR+ P+CS Y++ A +++G V+G +L   RL RC PL
Sbjct: 64  CRFEPSCSAYALTAVRRHGGVRGGLLAVRRLLRCQPL 100

Length = 176

>gnl|CDD|172853 PRK14377, PRK14377, hypothetical protein; Provisional

 Score = 46.3 bits (109), Expect = 1e-07
 Identities = 21/44 (47%), Positives = 28/44 (63%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNP 81
          ISP +   CR+ PTCSEY++ A KK+ + K   L A RL +C P
Sbjct: 21 ISPFLGAPCRFFPTCSEYALVALKKHPLRKSLFLIAKRLLKCGP 64

Length = 104

>gnl|CDD|172866 PRK14390, PRK14390, hypothetical protein; Provisional

 Score = 42.7 bits (100), Expect = 9e-07
 Identities = 20/44 (45%), Positives = 27/44 (61%)

Query: 39 SPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          SP     CR++P+CS Y  +A  ++G  KG  LT  RL RC+PL
Sbjct: 10 SPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLRRLSRCHPL 53

Length = 63

>gnl|CDD|172861 PRK14385, PRK14385, hypothetical protein; Provisional

 Score = 41.0 bits (96), Expect = 9e-06
 Identities = 16/45 (35%), Positives = 27/45 (60%)

Query: 38 ISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPL 82
          +S ++   C Y P+CS Y+++  KKY ++   +L   R+ RCN L
Sbjct: 25 LSKIVGFQCIYKPSCSNYALECLKKYNILTALILITLRIIRCNAL 69

Length = 96

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	121
PRK14382	68	hypothetical protein; Provisional	100.0
TIGR00278	75	conserved hypothetical protein YidD. This model de	100.0
PRK14373	73	hypothetical protein; Provisional	100.0
PRK14390	63	hypothetical protein; Provisional	100.0
COG0759	92	Uncharacterized conserved protein [Function unknow	100.0
PRK14380	81	hypothetical protein; Provisional	100.0
PRK14387	84	hypothetical protein; Provisional	100.0
PRK14385	96	hypothetical protein; Provisional	100.0
PRK14371	81	hypothetical protein; Provisional	100.0
PRK14388	82	hypothetical protein; Provisional	100.0
PRK14391	84	hypothetical protein; Provisional	100.0
PRK14379	95	hypothetical protein; Provisional	100.0
PRK14389	98	hypothetical protein; Provisional	100.0
PRK14375	70	hypothetical protein; Provisional	100.0
PRK14383	84	hypothetical protein; Provisional	100.0
PRK14374	118	hypothetical protein; Provisional	100.0
PRK14381	103	hypothetical protein; Provisional	100.0
PRK00041	93	hypothetical protein; Validated	100.0
PRK14378	103	hypothetical protein; Provisional	100.0
PRK14386	106	hypothetical protein; Provisional	100.0
PF01809	68	Haemolytic: Haemolytic domain; InterPro: IPR002696	100.0
PRK14372	97	hypothetical protein; Provisional	100.0
PRK14377	104	hypothetical protein; Provisional	100.0
PRK14370	120	hypothetical protein; Provisional	100.0
PRK14369	119	hypothetical protein; Provisional	100.0
PRK14376	176	hypothetical protein; Provisional	99.97
PRK14384	56	hypothetical protein; Provisional	99.96

>PRK14382 hypothetical protein; Provisional

Probab=100.00  E-value=1.9e-37  Score=210.43  Aligned_cols=64  Identities=39%  Similarity=0.846  Sum_probs=62.1

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCC
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFS   90 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp   90 (121)
                      .+.+|++||+++||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+|||
T Consensus         5 ~i~~I~~Yq~~iSp~~~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRC~P~~~gG~D~p   68 (68)
T PRK14382          5 LIKFIKFYQKFISPLYPSSCRFYPTCSTYAILSIEKYGALKGSLKAFWRILRCNPFSKGGVDYP   68 (68)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCccCHHHHHHHHHHHhCcHHHHHHHHHHHHhcCCCCCCCCCCC
Confidence            3667899999999999999999999999999999999999999999999999999999999998

>TIGR00278 conserved hypothetical protein YidD

Probab=100.00  E-value=1.5e-37  Score=214.33  Aligned_cols=72  Identities=35%  Similarity=0.478  Sum_probs=68.5

Q ss_pred             HHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccccccccc
Q 047567           28 LKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGTL   99 (121)
Q Consensus        28 l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~~~~~   99 (121)
                      +.+|++||+++||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+||||.++++...
T Consensus         2 i~lI~~Yq~~iSp~~~~~CRy~PTCS~Ya~~ai~~~G~~~G~~l~~~RilRC~P~~~gG~Dpvp~~~~~~~~   73 (75)
T TIGR00278         2 IALIRGYQIFISPFFPPSCRFYPTCSQYAIEALKTHGFLKGGWLTLKRILRCHPLHPGGNDPVPKKKQILES   73 (75)
T ss_pred             cHHHHHHHHHcCCCCCCCCCcCcCHHHHHHHHHHHhCcHHHHHHHHHHHhcCCCCCCCCcCCCCCccccccc
Confidence            467899999999999999999999999999999999999999999999999999999999999999887653

This model describes a family of small proteins of unknown function restricted to and broadly but not universally distributed among the Bacteria. Members frequently are found in the vicinity of rnpA, the gene for the protein subunit of ribonuclease P. A related protein is found in the temperature phage HP1 of Haemophilus influenzae. Annotation of some members of this family as hemolysins appears to represent propagation from an unpublished GenBank submission, L36462, attributed to Aeromonas hydrophila but a close match to E. coli.

>PRK14373 hypothetical protein; Provisional

Probab=100.00  E-value=5.4e-37  Score=210.82  Aligned_cols=66  Identities=41%  Similarity=0.681  Sum_probs=63.3

Q ss_pred             HHHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCc
Q 047567           26 KSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSV   91 (121)
Q Consensus        26 ~~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~   91 (121)
                      ..+.+|++||+++||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+||+|
T Consensus         8 ~~i~lI~~Yq~~iSp~~~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRC~P~~~gG~DpvP   73 (73)
T PRK14373          8 LLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKKYGAFKGGRLAIKRIARCHPFGGHGHDPVP   73 (73)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcCcCHHHHHHHHHHHhCcHHHHHHHHHHHhcCCCCCCCCCCCCc
Confidence            356788999999999999999999999999999999999999999999999999999999999986

>PRK14390 hypothetical protein; Provisional

Probab=100.00  E-value=3.5e-37  Score=206.90  Aligned_cols=62  Identities=32%  Similarity=0.529  Sum_probs=60.6

Q ss_pred             HHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCc
Q 047567           30 WVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSV   91 (121)
Q Consensus        30 lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~   91 (121)
                      +|++||++|||++|++|||+|||||||+||+++||++||++|+++||+|||||++||+||+|
T Consensus         1 ~I~~Yq~~iSp~~~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRC~P~~~gG~DpvP   62 (63)
T PRK14390          1 MISFYQKWFSPFFGPRCRFIPSCSSYGYEAITRHGPWKGGWLTLRRLSRCHPLTPCGCDPVP   62 (63)
T ss_pred             ChhHHHhHhCCCCCCCCCcCccHHHHHHHHHHHhCcHHHHHHHHHHHhcCCCCCCCCcCcCc
Confidence            47999999999999999999999999999999999999999999999999999999999987

>COG0759 Uncharacterized conserved protein [Function unknown]

Probab=100.00  E-value=8.7e-37  Score=217.92  Aligned_cols=70  Identities=37%  Similarity=0.597  Sum_probs=66.4

Q ss_pred             HHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccccccc
Q 047567           28 LKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFG   97 (121)
Q Consensus        28 l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~~~   97 (121)
                      +.+||+||++|||+.|++|||+|||||||+|||++||+++|+||+++||+|||||++||+||||..+...
T Consensus        11 i~~Ir~YQ~~iSpl~~~~CRf~PTCS~Ya~eAi~~hG~lkG~~l~~~RIlrC~Pf~~GG~DpvP~~~~~~   80 (92)
T COG0759          11 IFLIRFYQRFISPLLPPSCRFYPTCSEYAIEALKKHGLLKGLWLTLKRILRCHPFHKGGYDPVPERLSLR   80 (92)
T ss_pred             HHHHHHHHHHhCCCCCCCCcccccHHHHHHHHHHHhchHHHHHHHHHHHHhcCCCCCCCCCCCCcccccc
Confidence            3478999999999999999999999999999999999999999999999999999999999999977654

>PRK14380 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-36  Score=212.34  Aligned_cols=68  Identities=35%  Similarity=0.524  Sum_probs=64.2

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCcccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKF   94 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~   94 (121)
                      .+.+|++||+++||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+||+|..+
T Consensus        12 ~i~~I~~Yq~~iSP~~~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRC~P~~~gG~Dpvp~~~   79 (81)
T PRK14380         12 VCLPIKMYQYFISPLITPCCRYYPSCSEYADSAIKHYGVIKGLLMALNRLSRCHPWSKGGYDPLFPND   79 (81)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcCcCHHHHHHHHHHHhChHHHHHHHHHHHHhCCCCCCCCcCCCCCCC
Confidence            36688999999999999999999999999999999999999999999999999999999999987543

>PRK14387 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-36  Score=213.50  Aligned_cols=70  Identities=36%  Similarity=0.561  Sum_probs=66.2

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCcccccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIF   96 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~~   96 (121)
                      .+.+|++||+++||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+||||.+++-
T Consensus         8 ~i~lI~~Yq~~iSp~~~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRC~P~~~gG~DpvP~~~~~   77 (84)
T PRK14387          8 VDLGLRAYKLTLSPLIGRQCRFTPSCSEYTAAALKDHGPLKGSWLGLRRICRCNPFGGSGYDPPPPRHQP   77 (84)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHHHhChHHHHHHHHHHHhcCCCCCCCCcCCCCCCCCc
Confidence            4567799999999999999999999999999999999999999999999999999999999999987753

>PRK14385 hypothetical protein; Provisional

Probab=100.00  E-value=2.3e-36  Score=217.16  Aligned_cols=73  Identities=23%  Similarity=0.398  Sum_probs=69.8

Q ss_pred             HHHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCcccccccc
Q 047567           26 KSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGT   98 (121)
Q Consensus        26 ~~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~~~~   98 (121)
                      ..+.+|++||+++||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+||+|.+.+..+
T Consensus        13 ~~i~lI~~YQ~~iSPllg~~CRf~PTCSeYa~~Ai~~~G~~kG~~lt~~RIlRCnP~~~gG~DpVP~~~~~~~   85 (96)
T PRK14385         13 ILILLIKIYQNTLSKIVGFQCIYKPSCSNYALECLKKYNILTALILITLRIIRCNALFKGGNESLPTKKPILN   85 (96)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcCccHHHHHHHHHHHhChHHHHHHHHHHHhhCCCCCCCCCCCCCCCCCccc
Confidence            3478899999999999999999999999999999999999999999999999999999999999999988876

>PRK14371 hypothetical protein; Provisional

Probab=100.00  E-value=2e-36  Score=211.55  Aligned_cols=70  Identities=30%  Similarity=0.441  Sum_probs=66.4

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCcccccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIF   96 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~~   96 (121)
                      .+.+|++||++|||++|++|||+|||||||+|||++||+++|++|+++||+|||||++||+||+|.++..
T Consensus         5 ~i~lI~~Yq~~iSp~~~~~CRy~PTCS~Ya~~ai~~~G~~kG~~l~~~RilRC~P~~~gG~DpvP~~~~~   74 (81)
T PRK14371          5 ALVPIQFYRYAISPLMASHCRFYPSCSCYAYEAIENHGLLRGGWLSVRRLGRCHPWNPGGYDPVPPAPTS   74 (81)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHHHhCcHHHHHHHHHHHhcCCCCCCCCcCCCCCCCCC
Confidence            4667899999999999999999999999999999999999999999999999999999999999977654

>PRK14388 hypothetical protein; Provisional

Probab=100.00  E-value=2e-36  Score=212.13  Aligned_cols=67  Identities=31%  Similarity=0.480  Sum_probs=63.7

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLK   93 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k   93 (121)
                      .+.+|++||+++||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+||+|.+
T Consensus         5 ~i~lI~~YQ~~iSp~~~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRC~P~~~gG~DpVP~~   71 (82)
T PRK14388          5 LLLLLRFYQYFISPLLGNNCRFHPTCSEYAKEAISMHGSIKGLWFTFKRIIKCQPFCDGGYDTVPIS   71 (82)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHHHhCcHHHHHHHHHHHhcCCCCCCCCcCCCCCc
Confidence            3567899999999999999999999999999999999999999999999999999999999997764

>PRK14391 hypothetical protein; Provisional

Probab=100.00  E-value=4.5e-36  Score=211.06  Aligned_cols=69  Identities=36%  Similarity=0.715  Sum_probs=65.2

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFI   95 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~   95 (121)
                      .+.+|++||++|||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+||+|..++
T Consensus         5 ~i~lI~~Yq~~iSpl~~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRC~P~~~Gg~DPvP~~~~   73 (84)
T PRK14391          5 VIQLIQLYKKIISPLLPPACRFTPTCSEYAAQAFQECGFFQAIQLSAWRILRCNPLSQGFDDPLPPNTK   73 (84)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCcCcCHHHHHHHHHHHhCcHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence            356789999999999999999999999999999999999999999999999999999999999886654

>PRK14379 hypothetical protein; Provisional

Probab=100.00  E-value=7e-36  Score=214.11  Aligned_cols=70  Identities=37%  Similarity=0.559  Sum_probs=66.2

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCcccccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIF   96 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~~   96 (121)
                      .+.+|++||++|||++|++|||+|||||||+|||++||+++|++|+++||+|||||++||+||+|.++..
T Consensus         5 ~i~lIr~YQ~~iSp~~~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRCnP~~~gG~DpvP~~~~~   74 (95)
T PRK14379          5 LIFLVRVYQKFISPILPPSCRYYPTCSSYMIDALKKHGPILGLIMGLARILRCNPFIRGGVDPVPDYFTL   74 (95)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHHHHHhChHHHHHHHHHHHHhcCCCCCCCCCCCCCcccc
Confidence            3567899999999999999999999999999999999999999999999999999999999999987654

>PRK14389 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-35  Score=213.73  Aligned_cols=69  Identities=32%  Similarity=0.454  Sum_probs=65.8

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFI   95 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~   95 (121)
                      .+.+|++||++|||++|++|||+|||||||+|||++||+++|++|+++||+|||||++||+||+|.+++
T Consensus         6 ~i~lIr~Yq~~iSPl~~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRC~P~~~gG~DpVP~~~~   74 (98)
T PRK14389          6 LMALVRGYRLLLSPWLGSACRFEPTCSAYSLQALEQHGAAAGSYLTLRRLARCHPWCDGGHDPVPQEKP   74 (98)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHHHHHhChHHHHHHHHHHHhcCCCCCCCCcCCCCCCCC
Confidence            366789999999999999999999999999999999999999999999999999999999999998765

>PRK14375 hypothetical protein; Provisional

Probab=100.00  E-value=8.8e-36  Score=203.64  Aligned_cols=65  Identities=42%  Similarity=0.690  Sum_probs=61.8

Q ss_pred             HHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCc-ccCCcccc
Q 047567           30 WVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSV-ALFSVLKF   94 (121)
Q Consensus        30 lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG-~Dyp~~k~   94 (121)
                      +|++||+++||+++++|||+|||||||+|||++||+++|++|+++||+|||||++|| +||+|.+.
T Consensus         2 lI~~Yq~~iSp~~~~~CRy~PTCS~Ya~~Ai~~~G~~~G~~l~~~RilRCnP~~~gGg~DpvP~~~   67 (70)
T PRK14375          2 LINLYRYCISPFIPARCRYYPTCSEYALEALKTHGILKGLYLTTRRLLRCHPLSKRDYYDLVPCKN   67 (70)
T ss_pred             chHHHHHHhCCCCCCCCCCCcCHHHHHHHHHHHhChHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC
Confidence            579999999999999999999999999999999999999999999999999999995 99988654

>PRK14383 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-35  Score=208.34  Aligned_cols=68  Identities=35%  Similarity=0.609  Sum_probs=64.4

Q ss_pred             HHHHHHHhhhccCCCC-CCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccccc
Q 047567           28 LKWVLVKTGEISPLMP-RSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFI   95 (121)
Q Consensus        28 l~lIr~YQ~~ISP~~g-~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~   95 (121)
                      +.+|++||++|||+++ ++|||+|||||||+||+++||+++|+||+++||+|||||++||+|++|.+.+
T Consensus         9 i~lI~~Yq~~iSpl~~~~~CRy~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRC~P~~~gG~DpvP~~~~   77 (84)
T PRK14383          9 VRAVRWYQRVLSPRKPAPTCRFSPTCSQYAVEAIERHGALKGGWLALWRVLRCNPLVPGGFDPVPEHFP   77 (84)
T ss_pred             HHHHHHHHHHhCCcCCCCCCCcCccHHHHHHHHHHHhCcHHHHHHHHHHHhcCCCCCCCCcCCCCCccC
Confidence            5678999999999996 9999999999999999999999999999999999999999999999987654

>PRK14374 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-35  Score=219.72  Aligned_cols=86  Identities=19%  Similarity=0.258  Sum_probs=76.7

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCcccccccccchheehh
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFIFGTLLSVVYVG  106 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~~~~~~~~~~~~  106 (121)
                      .+.+|++||++|||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+|||.+++.+.+    ..++
T Consensus        13 li~lIr~YQ~~iSPll~~~CRf~PTCSeYaieAi~~~G~~kG~~L~~~RIlRCnP~~~GG~D~p~~~~~~~~----~~~~   88 (118)
T PRK14374         13 FTASIRGYQRFFSAFTFSSCRFYPTCSNYALWLLCFENPLSAMGKIAIRILSCNPFCSGGIAYPTTRLKRPS----LLQS   88 (118)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCCccHHHHHHHHHHHhChHHHHHHHHHHHhhCCCCCCCCcCCcHHHhccch----hhhc
Confidence            366889999999999999999999999999999999999999999999999999999999999999999987    2334


Q ss_pred             HHH------HHHHHHH
Q 047567          107 WFR------IIAAWIE  116 (121)
Q Consensus       107 ~~~------~i~~w~~  116 (121)
                      -.+      -|++|+-
T Consensus        89 ~~~~~~~~~~i~~W~v  104 (118)
T PRK14374         89 HKDFNRNFKTITFWLV  104 (118)
T ss_pred             ccccccccccceEEEe
Confidence            443      4777764

>PRK14381 hypothetical protein; Provisional

Probab=100.00  E-value=3.6e-35  Score=213.11  Aligned_cols=68  Identities=31%  Similarity=0.552  Sum_probs=64.7

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCcccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKF   94 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~   94 (121)
                      .+.+|++||+.|||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+||+|..+
T Consensus        15 ~i~lI~~YQ~~iSP~~~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~lt~~RIlRCnP~~~gG~DpVP~~~   82 (103)
T PRK14381         15 CLGLIHLYRWTISPLLGSPCRFFPSCSQYALQALKHHGCIMGLWLTIKRIGKCGPWHPGGIDLVPMTT   82 (103)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcCcCHHHHHHHHHHHhChHHHHHHHHHHHhhCCCCCCCCcCCCCCcC
Confidence            46778999999999999999999999999999999999999999999999999999999999988754

>PRK00041 hypothetical protein; Validated

Probab=100.00  E-value=4.5e-35  Score=208.62  Aligned_cols=71  Identities=35%  Similarity=0.505  Sum_probs=66.5

Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccccc
Q 047567           25 IKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFI   95 (121)
Q Consensus        25 ~~~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~   95 (121)
                      ..++.+|++||++|||++|++|||+|||||||+|||++||+++|++|+++||+|||||++||+||+|.+..
T Consensus        10 ~~~i~lI~~YQ~~iSP~~g~~CRy~PSCS~Ya~~Ai~~~G~~~G~~l~~~RilRC~P~~~gG~DpvP~~~~   80 (93)
T PRK00041         10 RLLIALIRFYQRFISPLLGPSCRFYPTCSEYAIEAIARHGLWKGSWLTLKRILRCHPFHPGGFDPVPDKFS   80 (93)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHhhcCCCCCCCcCCCCCccC
Confidence            34567889999999999999999999999999999999999999999999999999999999999996654

>PRK14378 hypothetical protein; Provisional

Probab=100.00  E-value=3.4e-35  Score=213.31  Aligned_cols=72  Identities=26%  Similarity=0.568  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCcccc
Q 047567           23 NSIKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKF   94 (121)
Q Consensus        23 ~~~~~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~   94 (121)
                      .+...+.+|++||++|||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+||+|.+.
T Consensus        12 ~~~~~i~lIr~YQ~~iSPllg~~CRf~PTCS~Ya~eAi~~~G~~kG~~Lt~~RIlRCnP~~~gG~DPVP~~~   83 (103)
T PRK14378         12 PRNAAIAVIRLYRRVVSPFYGDVCRYYPSCSAYGLEAVQEHGLIFGGYLAVWRVCRCHPWAEGGIDDVPARG   83 (103)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCcCccHHHHHHHHHHHhChHHHHHHHHHHHhcCCCCCCCCcCCCCCCC
Confidence            345668899999999999999999999999999999999999999999999999999999999999988664

>PRK14386 hypothetical protein; Provisional

Probab=100.00  E-value=3.3e-35  Score=214.19  Aligned_cols=68  Identities=38%  Similarity=0.681  Sum_probs=65.2

Q ss_pred             HHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccccc
Q 047567           28 LKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFI   95 (121)
Q Consensus        28 l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~   95 (121)
                      +.+|++||++|||++|++|||+|||||||+||+++||+++|++|+++||+|||||++||+||+|.+++
T Consensus         6 i~lIr~YQ~~iSPl~g~~CRf~PTCS~Ya~~Ai~~~G~~kG~~L~~~RIlRCnP~~~gGyDPVP~~~~   73 (106)
T PRK14386          6 RWFIRLYQIAISPLLGPRCRYIPTCSQYALEALQTHGAIKGVWLSSKRICRCHPWGGSGYDPVPPKAI   73 (106)
T ss_pred             HHHHHHHHHHhCCCCCCCCCcCcCHHHHHHHHHHHhCcHHHHHHHHHHHhcCCCCCCCCcCCCCCccc
Confidence            56789999999999999999999999999999999999999999999999999999999999998755

>PF01809 Haemolytic: Haemolytic domain; InterPro: IPR002696 This is a family of short (70 amino acid) hypothetical proteins from various bacteria

Probab=100.00  E-value=6.8e-35  Score=196.61  Aligned_cols=66  Identities=39%  Similarity=0.607  Sum_probs=63.2

Q ss_pred             HHHHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCC
Q 047567           25 IKSLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFS   90 (121)
Q Consensus        25 ~~~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp   90 (121)
                      ..++.+|++||+++||.+|++|||+|||||||+||+++||+++|++|+++||+|||||++||+|||
T Consensus         3 ~~~~~~I~~Yq~~iSp~~g~~Cr~~PSCS~Y~~~ai~~~G~~~G~~l~~~Ri~rC~p~~~gG~Dpv   68 (68)
T PF01809_consen    3 KLAIGLIRFYQRYISPLKGPRCRFYPSCSEYAKQAIRKYGLFKGLWLTADRILRCNPFSKGGYDPV   68 (68)
T ss_pred             HHHHHHHHHHHhHhCCCCCCCCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHcCCCCCCCCCCC
Confidence            346778899999999999999999999999999999999999999999999999999999999997

They contain three conserved cysteine residues. Q44066 from SWISSPROT from Aeromonas hydrophila has been found to have hemolytic activity.

>PRK14372 hypothetical protein; Provisional

Probab=100.00  E-value=8.9e-35  Score=209.31  Aligned_cols=68  Identities=29%  Similarity=0.583  Sum_probs=64.4

Q ss_pred             HHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccccc
Q 047567           28 LKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFI   95 (121)
Q Consensus        28 l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~   95 (121)
                      +.+|++||+++||++|++|||+||||+||+|||++||+++|++|+++||+|||||++||+|++|.++.
T Consensus         2 i~lIr~YQ~~iSPl~g~~CRf~PTCS~YA~qAi~~~G~~kG~~Lt~~RIlRCnP~~~gG~DpVP~~~~   69 (97)
T PRK14372          2 IRGIRWYQQRISANTPPCCKYYPSCSNYAIEAIERFGAFKGGVLAVLRLLRCRPWSRGGIDDVPQRYS   69 (97)
T ss_pred             cHHHHHHHHHhCCCCCCCCCcCccHHHHHHHHHHHhChHHHHHHHHHHHhcCCCCCCCCcCCCCCccc
Confidence            35679999999999999999999999999999999999999999999999999999999999987654

>PRK14377 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-34  Score=209.93  Aligned_cols=67  Identities=33%  Similarity=0.443  Sum_probs=64.2

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLK   93 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k   93 (121)
                      .+.+|++||++|||++|++|||+|||||||+|||++||+++|++|+++||+|||||++||+|++|..
T Consensus        10 ~i~lIr~YQ~~iSP~~~~~CRf~PTCSeYa~~Ai~~~G~~kG~~lt~~RIlRCnP~~~gG~DPVP~~   76 (104)
T PRK14377         10 FRGLVHLYRWAISPFLGAPCRFFPTCSEYALVALKKHPLRKSLFLIAKRLLKCGPWCIGGIDLVPRT   76 (104)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCcCHHHHHHHHHHHhChHHHHHHHHHHHhcCCCCCCCCcCCCCCc
Confidence            3567899999999999999999999999999999999999999999999999999999999999965

>PRK14370 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-34  Score=214.60  Aligned_cols=68  Identities=41%  Similarity=0.687  Sum_probs=64.9

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCcccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKF   94 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~   94 (121)
                      .+.+|++||+++||++|++|||+|||||||+||+++||+++|+||+++||+|||||++||+||+|...
T Consensus        13 li~lIr~YQ~~iSPllg~~CRf~PTCSeYA~~Ai~~hG~~kG~~Lt~~RIlRCnP~~~GG~DPVP~~~   80 (120)
T PRK14370         13 LLAFIHFYQRIISPILPARCRYYPTCSNYGKQAIAWHGVGKGSLLLLKRIGRCHPLGGHGIDFVPLPL   80 (120)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCCcCHHHHHHHHHHHhChHHHHHHHHHHHhcCCCCCCCCcCCCCChh
Confidence            46788999999999999999999999999999999999999999999999999999999999988654

>PRK14369 hypothetical protein; Provisional

Probab=100.00  E-value=3.1e-34  Score=212.62  Aligned_cols=69  Identities=36%  Similarity=0.628  Sum_probs=65.8

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFI   95 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~   95 (121)
                      .+.+|++||++|||++|++|||+|||||||+|||++||++||++|+++||+|||||++||+||||.++.
T Consensus         5 li~lIr~YQ~~iSPllg~~CRf~PTCSeYa~eAi~~~G~~kG~~Lt~~RIlRCnP~~~GG~DpVP~~~~   73 (119)
T PRK14369          5 LLALIKLYQWTISPLLGPVCKYYPSCSHYGYTAIDRHGAIKGTALTAWRILRCNPWSLGGVDHVPPRKR   73 (119)
T ss_pred             HHHHHHHHHHHhCCcCCCCCCcCcCHHHHHHHHHHHhChHHHHHHHHHHHhcCCCCCCCCcCCCCCccc
Confidence            356779999999999999999999999999999999999999999999999999999999999998865

>PRK14376 hypothetical protein; Provisional

Probab=99.97  E-value=9.1e-32  Score=209.77  Aligned_cols=69  Identities=28%  Similarity=0.381  Sum_probs=65.4

Q ss_pred             HHHHHHHHhhhccCCCCCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCccccc
Q 047567           27 SLKWVLVKTGEISPLMPRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKFI   95 (121)
Q Consensus        27 ~l~lIr~YQ~~ISP~~g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~~   95 (121)
                      .+.+|++||++|||+++++|||+|||||||+|||++||+++|.||+++||+|||||++||+||+|...+
T Consensus        45 lI~LIr~YQ~~ISPllg~~CRF~PTCSeYAiqAI~k~G~~kG~~Lt~~RILRCnP~~~GGyDPVP~~~~  113 (176)
T PRK14376         45 FAGLVRLYRAGWSGRNAGCCRFEPSCSAYALTAVRRHGGVRGGLLAVRRLLRCQPLSAGGYDPVPGEAP  113 (176)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCcCccHHHHHHHHHHHhCcHHHHHHHHHHHhcCCCCCCCCcCCCCCCCC
Confidence            366789999999999999999999999999999999999999999999999999999999999988753

>PRK14384 hypothetical protein; Provisional

Probab=99.96  E-value=6.4e-30  Score=168.74  Aligned_cols=52  Identities=44%  Similarity=0.825  Sum_probs=49.5

Q ss_pred             CCCCCcCCCcHHHHHHHHHHhChhHHHHHHHHHHhhcCCCCCCcccCCcccc
Q 047567           43 PRSCRYVPTCSEYSMQAYKKYGVVKGTVLTAWRLCRCNPLGNSVALFSVLKF   94 (121)
Q Consensus        43 g~~CRf~PTCSeYa~eAI~k~G~~kG~~Lt~~RIlRCnP~~~gG~Dyp~~k~   94 (121)
                      +++|||+|||||||+|||++||++||++|+++||+|||||++||+||+|.+.
T Consensus         1 ~~~CRf~PTCS~Ya~~Ai~~~G~~kG~~l~~~RilRCnP~~~gG~DpvP~~~   52 (56)
T PRK14384          1 MSSCRFYPSCSCYAETALKRFGVIKGSGLTVWRLLRCHPFHPGGVDFVPEKS   52 (56)
T ss_pred             CCCCcccccHHHHHHHHHHHHChHHHHHHHHHHHhcCCCCCCCCcCCCCCcc
Confidence            3689999999999999999999999999999999999999999999999764

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00