Citrus Sinensis ID: 047753

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-

MLERCVGTLRARQIQRVIRHGKITLLCLFMTVIVLRGTIGAGKFGTPEQDIDDIRQHFYAHRKRVEPHRVLEEVQTTDAAKTEDPNNYEKFDMNKLFVDEGEDEKRDPNKHDPSGSKRNPTLPNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQVLNMYGFEHRTLASKKVKRIRNETSTPLEVKDELGIRHPAFKVVKVAASS

ccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccccHHHHHHHHHHccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccEEEEccEEEccccccccHHHHHHHHHcccccccccccccEEEccccccccccccccHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccccccccHHccccccccEEccccccc

cHHHHccHHHHHHHHHHHHHcHEHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccEEEEEEccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHHHHHHccccEEEEEEcccEEEEcccccccHHHcccccEEEcccccEEEcccccccccccEEEEEccHHHHHHHHHHccccccccHHHHHcHHHHHHHcccccccHHHHHHHHHHHHHccHHHcccEEEcccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEcccccccccccHHHHccccccEEEEEEcccc

MLERCVGTLRARQIQRVIRHGKITLLCLFMTVIVLRgtigagkfgtpeqdidDIRQHFYAHrkrvephrvleevqttdaaktedpnnyekfdmnklfvdegedekrdpnkhdpsgskrnptlpnflrpnkprvllvtgsspkpcenpvgdhyLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLlshpeveflwwmdsdamftdmafevpwerykdhnlvmhGWKEMVYDEknwiglntgSFLLRNCQWALDLLDawapmgpkgkirdDAGKILTrelkgrpvfeaddQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIEnyhpglgdhrwplvthfvgckpcgkfgdypveRCLKQMDRafnfgdnqvlnmYGFEHRTLASKKVKRirnetstplevkdelgirhpaFKVVKVAASS

mlercvgtlrarqiqrvirhgkitLLCLFMTVIVLRGTIGAGKFGTPEQDIDDIRQHFYAHrkrvephrvleevqttdaaktedpnnyekfdmnKLFVDEGEDekrdpnkhdpsgskrnptlpnflrpnKPRVLLVTgsspkpcenpvGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRElkgrpvfeaddqSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQVLNMYGFEHRTlaskkvkrirnetstplevkdelgirhpafkvvkvaass

****CVGTLRARQIQRVIRHGKITLLCLFMTVIVLRGTIGAGKFGTPEQDIDDIRQHFYAHRKRV********************************************************************************NPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQVLNMYGFEHRTLASKKV****************LGIRHPAFKVV******

*************IQRVIRHGKITLLCLFMTVIVLRGTIGAGKFGTPEQ************RKRVEP*****************************FVDEGEDEKRDPN************************LLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYE**IENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQVLNMYGFEHRTLAS*KVK***NETSTPLEVKDELGIRHPAFK***V****

MLERCVGTLRARQIQRVIRHGKITLLCLFMTVIVLRGTIGAGKFGTPEQDIDDIRQHFYAHRKRVEPHRVLEEVQTTDAAKTEDPNNYEKFDMNKLFVDE*****************RNPTLPNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQVLNMYGFEHRTLASKKVKRIRNETSTPLEVKDELGIRHPAFKVVKVAASS

MLERCVGTLRARQIQRVIRHGKITLLCLFMTVIVLRGTIGAGKFGTPEQDIDDIRQHFYAHRKRVEPHRVLEEVQ************YEKFDMNKLFVDEGEDEKRDPNKHDPSGSKRNPTLPNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQVLNMYGFEHRTLASKKVKRIRNETSTPLEVKDELGIRHPAFKVVKV****

iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		441	2.2.26 [Sep-21-2011]
O22775		461	Putative glycosyltransfer	yes	no	0.997	0.954	0.780	0.0
Q9LZJ3		460	Xyloglucan 6-xylosyltrans	no	no	0.997	0.956	0.745	0.0
Q9LF80		457	Putative glycosyltransfer	no	no	0.922	0.890	0.592	1e-150
Q9CA75		457	Putative glycosyltransfer	no	no	0.918	0.886	0.599	1e-150
Q9M9U0		513	Putative glycosyltransfer	no	no	0.954	0.820	0.514	1e-140
Q564G7		435	Galactomannan galactosylt	N/A	no	0.650	0.659	0.438	1e-76
O81007		449	Putative glycosyltransfer	no	no	0.634	0.623	0.428	2e-74
Q9SZG1		432	Glycosyltransferase 6 OS=	no	no	0.634	0.648	0.421	3e-73
O94622		375	Uncharacterized alpha-1,2	yes	no	0.473	0.557	0.234	1e-08
Q09174		375	Alpha-1,2-galactosyltrans	no	no	0.315	0.370	0.210	0.0003

>sp\|O22775\|GT2_ARATH Putative glycosyltransferase 2 OS=Arabidopsis thaliana GN=GT2 PE=2 SV=1	Back alignment and function desciption

 Score =  733 bits (1892), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/461 (78%), Positives = 398/461 (86%), Gaps = 21/461 (4%)

Query: 1   MLERCVGTLRARQIQRVIRHGKITLLCLFMTVIVLRGTIGAGKFGTPEQDIDDIRQHFYA 60
           M+ERC+G  R R+IQR +R  K+T+LCL +TV+VLR TIGAGKFGTPEQD+D+IRQHF+A
Sbjct: 1   MIERCLGAYRCRRIQRALRQLKVTILCLLLTVVVLRSTIGAGKFGTPEQDLDEIRQHFHA 60

Query: 61  HRKRVEPHRVLEEVQTTDAAKTEDPNN-------YEKFDMNKLFVDEGEDEKRDPNKHDP 113
            RKR EPHRVLEE+QT   + + D          YE FD+NK+FVDEGE+EK DPNK   
Sbjct: 61  -RKRGEPHRVLEEIQTGGDSSSGDGGGNSGGSNNYETFDINKIFVDEGEEEKPDPNKPYT 119

Query: 114 SGSK-------------RNPTLPNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNK 160
            G K             +NP+ PNF+ PNKPRVLLVTGS+PKPCENPVGDHYLLKSIKNK
Sbjct: 120 LGPKISDWDEQRSDWLAKNPSFPNFIGPNKPRVLLVTGSAPKPCENPVGDHYLLKSIKNK 179

Query: 161 IDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFE 220
           IDYCR+HGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPE+EFLWWMDSDAMFTDMAFE
Sbjct: 180 IDYCRLHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFTDMAFE 239

Query: 221 VPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRD 280
           +PWERYKD+NLVMHGW EMVYD+KNWIGLNTGSFLLRN QWALDLLD WAPMGPKGKIR+
Sbjct: 240 LPWERYKDYNLVMHGWNEMVYDQKNWIGLNTGSFLLRNNQWALDLLDTWAPMGPKGKIRE 299

Query: 281 DAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEE 340
           +AGK+LTRELK RPVFEADDQSAMVYLL TQRD WG KVYLES YYLHGYWGILVDRYEE
Sbjct: 300 EAGKVLTRELKDRPVFEADDQSAMVYLLATQRDAWGNKVYLESGYYLHGYWGILVDRYEE 359

Query: 341 MIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQVLNMYGFEH 400
           MIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQ+L +YGF H
Sbjct: 360 MIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQIYGFTH 419

Query: 401 RTLASKKVKRIRNETSTPLEVKDELGIRHPAFKVVKVAASS 441
           ++LAS+KVKR+RNETS PLE+KDELG+ HPAFK VKV  + 
Sbjct: 420 KSLASRKVKRVRNETSNPLEMKDELGLLHPAFKAVKVQTNQ 460

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: -EC: .EC: -

>sp\|Q9LZJ3\|XT1_ARATH Xyloglucan 6-xylosyltransferase OS=Arabidopsis thaliana GN=XT1 PE=1 SV=1	Back alignment and function description

>sp\|Q9LF80\|GT3_ARATH Putative glycosyltransferase 3 OS=Arabidopsis thaliana GN=GT3 PE=2 SV=1	Back alignment and function description

>sp\|Q9CA75\|GT5_ARATH Putative glycosyltransferase 5 OS=Arabidopsis thaliana GN=GT5 PE=2 SV=1	Back alignment and function description

>sp\|Q9M9U0\|GT4_ARATH Putative glycosyltransferase 4 OS=Arabidopsis thaliana GN=GT4 PE=2 SV=1	Back alignment and function description

>sp\|Q564G7\|GMGT1_CYATE Galactomannan galactosyltransferase 1 OS=Cyamopsis tetragonoloba GN=GMGT1 PE=1 SV=1	Back alignment and function description

>sp\|O81007\|GT7_ARATH Putative glycosyltransferase 7 OS=Arabidopsis thaliana GN=GT7 PE=2 SV=1	Back alignment and function description

>sp\|Q9SZG1\|GT6_ARATH Glycosyltransferase 6 OS=Arabidopsis thaliana GN=GT6 PE=2 SV=1	Back alignment and function description

>sp\|O94622\|YBKD_SCHPO Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1289.13c PE=3 SV=1	Back alignment and function description

>sp\|Q09174\|GMA12_SCHPO Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gma12 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		441
255551747		461	Xyloglucan 6-xylosyltransferase, putativ	1.0	0.956	0.796	0.0
224110550		460	predicted protein [Populus trichocarpa]	1.0	0.958	0.791	0.0
225432316		450	PREDICTED: putative glycosyltransferase	0.990	0.971	0.796	0.0
147836354		450	hypothetical protein VITISV_027412 [Viti	0.990	0.971	0.796	0.0
449432844		456	PREDICTED: putative glycosyltransferase	1.0	0.967	0.778	0.0
147774978		452	hypothetical protein VITISV_017033 [Viti	0.993	0.969	0.797	0.0
224118952		459	predicted protein [Populus trichocarpa]	0.997	0.958	0.784	0.0
359479900		478	PREDICTED: putative glycosyltransferase	0.993	0.916	0.795	0.0
55956970		450	alpha-1,6-xylosyltransferase [Vitis vini	0.990	0.971	0.788	0.0
302398731		461	CAMTA domain class transcription factor	1.0	0.956	0.769	0.0

>gi\|255551747\|ref\|XP_002516919.1\| Xyloglucan 6-xylosyltransferase, putative [Ricinus communis] gi\|223544007\|gb\|EEF45533.1\| Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/461 (79%), Positives = 400/461 (86%), Gaps = 20/461 (4%)

Query: 1   MLERCVGTLRARQIQRVIRHGKITLLCLFMTVIVLRGTIGAGKFGTPEQDIDDIRQHFYA 60
           MLERC+GT R  +IQR IRHGK+TL CLFMTVIVLRGTIGAGKFGTPEQD +D+R+ FYA
Sbjct: 1   MLERCLGTHRVVRIQRAIRHGKVTLFCLFMTVIVLRGTIGAGKFGTPEQDFNDLRERFYA 60

Query: 61  HRKRVEPHRVLEEVQ-TTDAAKT------EDPNNYEKFDMNKLFVDEGEDEKRDPNKHDP 113
            RK  EPHRVL E Q +T++ +        DP NY  FD+N + VDEG+DEK DPNK   
Sbjct: 61  SRKHAEPHRVLVEAQLSTESTQNNNNNDNTDPKNYATFDINTILVDEGQDEKPDPNKPYS 120

Query: 114 SGS-------------KRNPTLPNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNK 160
            G              K+NP  PNF+ PNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNK
Sbjct: 121 LGPRISDWDEQRAEWLKKNPNFPNFIGPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNK 180

Query: 161 IDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFE 220
           IDYCR+HGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPE+EFLWWMDSDAMFTDMAFE
Sbjct: 181 IDYCRLHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEIEFLWWMDSDAMFTDMAFE 240

Query: 221 VPWERYKDHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRD 280
           VPWERYKD N VMHGW EM+YD+KNWIGLNTGSFLLRNCQWALD+LDAWAPMGPKGKIR+
Sbjct: 241 VPWERYKDSNFVMHGWNEMIYDQKNWIGLNTGSFLLRNCQWALDILDAWAPMGPKGKIRE 300

Query: 281 DAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEE 340
           +AGK+LTRELK RPVFEADDQSAMVYLL TQRDKWG+KVYLESAYYLHGYWGILVDRYEE
Sbjct: 301 EAGKVLTRELKDRPVFEADDQSAMVYLLATQRDKWGDKVYLESAYYLHGYWGILVDRYEE 360

Query: 341 MIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQVLNMYGFEH 400
           MIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQ+L MYGF H
Sbjct: 361 MIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQILQMYGFTH 420

Query: 401 RTLASKKVKRIRNETSTPLEVKDELGIRHPAFKVVKVAASS 441
           ++LAS++VKR+RNE+S PLEVKDELG+ HPAFK VK+  SS
Sbjct: 421 KSLASRRVKRVRNESSIPLEVKDELGLLHPAFKAVKLPISS 461

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|224110550\|ref\|XP_002315554.1\| predicted protein [Populus trichocarpa] gi\|222864594\|gb\|EEF01725.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|225432316\|ref\|XP_002273887.1\| PREDICTED: putative glycosyltransferase 2 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|147836354\|emb\|CAN77730.1\| hypothetical protein VITISV_027412 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|449432844\|ref\|XP_004134208.1\| PREDICTED: putative glycosyltransferase 2-like [Cucumis sativus] gi\|449513361\|ref\|XP_004164306.1\| PREDICTED: putative glycosyltransferase 2-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|147774978\|emb\|CAN59912.1\| hypothetical protein VITISV_017033 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224118952\|ref\|XP_002331344.1\| predicted protein [Populus trichocarpa] gi\|222873377\|gb\|EEF10508.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359479900\|ref\|XP_002263821.2\| PREDICTED: putative glycosyltransferase 2 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|55956970\|emb\|CAI11449.1\| alpha-1,6-xylosyltransferase [Vitis vinifera]	Back alignment and taxonomy information

>gi\|302398731\|gb\|ADL36660.1\| CAMTA domain class transcription factor [Malus x domestica]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		441
TAIR\|locus:2132293		461	XT2 "UDP-xylosyltransferase 2"	0.798	0.763	0.841	2.4e-214
TAIR\|locus:2081625		460	XT1 "xylosyltransferase 1" [Ar	0.807	0.773	0.784	3.1e-201
TAIR\|locus:2019090		457	XXT5 "xyloglucan xylosyltransf	0.925	0.892	0.6	6.1e-142
TAIR\|locus:2160369		457	XXT3 "xyloglucan xylosyltransf	0.947	0.914	0.581	9.9e-142
TAIR\|locus:2035030		513	XXT4 "xyloglucan xylosyltransf	0.702	0.604	0.684	2.2e-135
TAIR\|locus:2059155		449	AT2G22900 [Arabidopsis thalian	0.505	0.496	0.475	1.2e-75
TAIR\|locus:2120145		432	AT4G37690 [Arabidopsis thalian	0.503	0.513	0.473	8.5e-75
TAIR\|locus:2121798		120	AT4G38310 [Arabidopsis thalian	0.176	0.65	0.506	5.6e-19
POMBASE\|SPBC1289.13c		375	SPBC1289.13c "alpha-1,2-galact	0.480	0.565	0.247	3.2e-07
POMBASE\|SPAC22E12.06c		332	gmh3 "alpha-1,2-galactosyltran	0.201	0.268	0.247	5.8e-05

TAIR\|locus:2132293 XT2 "UDP-xylosyltransferase 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 1706 (605.6 bits), Expect = 2.4e-214, Sum P(2) = 2.4e-214
 Identities = 307/365 (84%), Positives = 330/365 (90%)

Query:    86 NNYEKFDMNKLFVDEGEDEKRDPNKHDPSGSK-------------RNPTLPNFLRPNKPR 132
             NNYE FD+NK+FVDEGE+EK DPNK    G K             +NP+ PNF+ PNKPR
Sbjct:    92 NNYETFDINKIFVDEGEEEKPDPNKPYTLGPKISDWDEQRSDWLAKNPSFPNFIGPNKPR 151

Query:   133 VLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLI 192
             VLLVTGS+PKPCENPVGDHYLLKSIKNKIDYCR+HGIEIFYNMALLDAEMAGFWAKLPLI
Sbjct:   152 VLLVTGSAPKPCENPVGDHYLLKSIKNKIDYCRLHGIEIFYNMALLDAEMAGFWAKLPLI 211

Query:   193 RKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDHNLVMHGWKEMVYDEKNWIGLNTG 252
             RKLLLSHPE+EFLWWMDSDAMFTDMAFE+PWERYKD+NLVMHGW EMVYD+KNWIGLNTG
Sbjct:   212 RKLLLSHPEIEFLWWMDSDAMFTDMAFELPWERYKDYNLVMHGWNEMVYDQKNWIGLNTG 271

Query:   253 SFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQR 312
             SFLLRN QWALDLLD WAPMGPKGKIR++AGK+LTRELK RPVFEADDQSAMVYLL TQR
Sbjct:   272 SFLLRNNQWALDLLDTWAPMGPKGKIREEAGKVLTRELKDRPVFEADDQSAMVYLLATQR 331

Query:   313 DKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDY 372
             D WG KVYLES YYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDY
Sbjct:   332 DAWGNKVYLESGYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDY 391

Query:   373 PVERCLKQMDRAFNFGDNQVLNMYGFEHRTLASKKVKRIRNETSTPLEVKDELGIRHPAF 432
             PVERCLKQMDRAFNFGDNQ+L +YGF H++LAS+KVKR+RNETS PLE+KDELG+ HPAF
Sbjct:   392 PVERCLKQMDRAFNFGDNQILQIYGFTHKSLASRKVKRVRNETSNPLEMKDELGLLHPAF 451

Query:   433 KVVKV 437
             K VKV
Sbjct:   452 KAVKV 456

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016740 "transferase activity" evidence=ISS

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0000271 "polysaccharide biosynthetic process" evidence=RCA;IDA

GO:0035252 "UDP-xylosyltransferase activity" evidence=IDA

GO:0009969 "xyloglucan biosynthetic process" evidence=IGI

GO:0033843 "xyloglucan 6-xylosyltransferase activity" evidence=IGI

GO:0048767 "root hair elongation" evidence=IGI;RCA

GO:0009825 "multidimensional cell growth" evidence=RCA

GO:0009932 "cell tip growth" evidence=RCA

GO:0010817 "regulation of hormone levels" evidence=RCA

GO:0019761 "glucosinolate biosynthetic process" evidence=RCA

GO:0043481 "anthocyanin accumulation in tissues in response to UV light" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0005515 "protein binding" evidence=IPI

GO:0010411 "xyloglucan metabolic process" evidence=IDA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

TAIR\|locus:2081625 XT1 "xylosyltransferase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2019090 XXT5 "xyloglucan xylosyltransferase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2160369 XXT3 "xyloglucan xylosyltransferase 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2035030 XXT4 "xyloglucan xylosyltransferase 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2059155 AT2G22900 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2120145 AT4G37690 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2121798 AT4G38310 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

POMBASE\|SPBC1289.13c SPBC1289.13c "alpha-1,2-galactosyltransferase (predicted)" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

POMBASE\|SPAC22E12.06c gmh3 "alpha-1,2-galactosyltransferase Gmh3" [Schizosaccharomyces pombe (taxid:4896)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O22775	GT2_ARATH	2, ., 4, ., -, ., -	0.7809	0.9977	0.9544	yes	no
Q9LZJ3	XT1_ARATH	2, ., 4, ., 2, ., 3, 9	0.7456	0.9977	0.9565	no	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.2	0.983
3rd Layer	2.4.2.39	0.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00100276	hypothetical protein (460 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		441
PLN03182		429	PLN03182, PLN03182, xyloglucan 6-xylosyltransferas	0.0
PLN03181		453	PLN03181, PLN03181, glycosyltransferase; Provision	1e-128
pfam05637		239	pfam05637, Glyco_transf_34, galactosyl transferase	8e-87

>gnl\|CDD\|215617 PLN03182, PLN03182, xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

 Score =  775 bits (2003), Expect = 0.0
 Identities = 304/446 (68%), Positives = 362/446 (81%), Gaps = 30/446 (6%)

Query: 1   MLERCVGTLRARQIQRVIRHGKITLLCLFMTVIVLRGTIGAGKFGTPEQDIDDIRQHFYA 60
           ML+RC+GT R RQ+QR + + KIT+LC F+T++VLRGTI  GKFGTPEQD  ++R HF +
Sbjct: 1   MLQRCLGTPRGRQLQRTLNNLKITILCGFVTILVLRGTIA-GKFGTPEQDFVELRAHFLS 59

Query: 61  HRKRVEPHRVLEEVQTTDAAKTEDPNNYEKFDMNKLFVDEGEDEKRDPNKHDPSGSK--- 117
            R+  EP RVL E++  D               +   +DE E+E+ DPN     G K   
Sbjct: 60  ARRIEEPSRVLAEIRFDD---------------DLTDLDEVEEERWDPNTPYTLGPKISD 104

Query: 118 ----------RNPTLPNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIH 167
                     +NP  P+F+   KPRVLLVTGS PKPCENPVGDHYLLKS+KNKIDYCR+H
Sbjct: 105 WDEQRRRWLRKNPGFPSFVNG-KPRVLLVTGSQPKPCENPVGDHYLLKSLKNKIDYCRLH 163

Query: 168 GIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYK 227
           GIEIFYNMA LDAEMAGFWAKLPL+RKL+L+HPEVE++WWMDSDA+FTDM FE+P E+Y+
Sbjct: 164 GIEIFYNMAHLDAEMAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYE 223

Query: 228 DHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILT 287
            +NLV+HGW E+VYD+K+WIGLNTGSFL+RNCQW+LDLLDAWAPMGPKG IRD+AGKILT
Sbjct: 224 GYNLVIHGWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILT 283

Query: 288 RELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHP 347
            ELKGRP FEADDQSA+VYLL+TQR++WG+KVYLE++YYLHGYW  LVDRYEEM+E YHP
Sbjct: 284 AELKGRPAFEADDQSALVYLLLTQRERWGDKVYLENSYYLHGYWVGLVDRYEEMMEKYHP 343

Query: 348 GLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNFGDNQVLNMYGFEHRTLASKK 407
           GLGD RWP VTHFVGCKPCG +GDYPVERCLKQM+RAFNF DNQVL +YGF H++LAS +
Sbjct: 344 GLGDDRWPFVTHFVGCKPCGGYGDYPVERCLKQMERAFNFADNQVLELYGFRHKSLASAE 403

Query: 408 VKRIRNETSTPLEVKDELGIRHPAFK 433
           VKR+RN+TS PLE KDELG+RHPAFK
Sbjct: 404 VKRVRNDTSNPLEAKDELGLRHPAFK 429

Length = 429

>gnl\|CDD\|215616 PLN03181, PLN03181, glycosyltransferase; Provisional	Back alignment and domain information

>gnl\|CDD\|203296 pfam05637, Glyco_transf_34, galactosyl transferase GMA12/MNN10 family	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		441
PLN03182		429	xyloglucan 6-xylosyltransferase; Provisional	100.0
PLN03181		453	glycosyltransferase; Provisional	100.0
KOG4748		364	consensus Subunit of Golgi mannosyltransferase com	100.0
PF05637		239	Glyco_transf_34: galactosyl transferase GMA12/MNN1	100.0
PF03314		222	DUF273: Protein of unknown function, DUF273; Inter	99.43
KOG4748		364	consensus Subunit of Golgi mannosyltransferase com	99.09
PF03407		212	Nucleotid_trans: Nucleotide-diphospho-sugar transf	98.44
PF01501		250	Glyco_transf_8: Glycosyl transferase family 8; Int	97.04
cd06914		278	GT8_GNT1 GNT1 is a fungal enzyme that belongs to t	96.8
cd04194		248	GT8_A4GalT_like A4GalT_like proteins catalyze the	96.68
cd02537		240	GT8_Glycogenin Glycogenin belongs the GT 8 family	96.61
PLN00176		333	galactinol synthase	95.92
cd00505		246	Glyco_transf_8 Members of glycosyltransferase fami	94.61
cd06429		257	GT8_like_1 GT8_like_1 represents a subfamily of GT	94.48
PRK15171		334	lipopolysaccharide 1,3-galactosyltransferase; Prov	93.57
cd06430		304	GT8_like_2 GT8_like_2 represents a subfamily of GT	93.0
cd06431		280	GT8_LARGE_C LARGE catalytic domain has closest hom	92.23
PLN02829		639	Probable galacturonosyltransferase	91.31
PLN02769		629	Probable galacturonosyltransferase	89.52
COG1442		325	RfaJ Lipopolysaccharide biosynthesis proteins, LPS	86.49
PLN02718		603	Probable galacturonosyltransferase	84.0
PLN02910		657	polygalacturonate 4-alpha-galacturonosyltransferas	83.86
PLN02742		534	Probable galacturonosyltransferase	83.4

>PLN03182 xyloglucan 6-xylosyltransferase; Provisional	Back alignment and domain information

Probab=100.00  E-value=4.6e-139  Score=1058.77  Aligned_cols=415  Identities=72%  Similarity=1.313  Sum_probs=393.7

Q ss_pred             CccccccchHHHHHHHhhhcceehhhhhHHHHhhhhccccCCCCCCCCCchHHHHHHhhhhccccCccchhhhhhccccC
Q 047753            1 MLERCVGTLRARQIQRVIRHGKITLLCLFMTVIVLRGTIGAGKFGTPEQDIDDIRQHFYAHRKRVEPHRVLEEVQTTDAA   80 (441)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~t~~c~~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (441)
                      +.+++++.+|+|++||++||+||||||||||||||||| |+|+||++++|+.++++++.+.+.+++++|+|+|++.+.+ 
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~k~t~lc~~~tilvlrgt-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-   78 (429)
T PLN03182          1 MLQRCLGTPRGRQLQRTLNNLKITILCGFVTILVLRGT-IAGKFGTPEQDFVELRAHFLSARRIEEPSRVLAEIRFDDD-   78 (429)
T ss_pred             CccccccchhhhhHHHHHhccchhhhhhhheeeEeccc-cccccCCCCcchhhhhhhhccccccccccccchhccccCc-
Confidence            46789999999999999999999999999999999999 9999999999999999999999999999999999884333 


Q ss_pred             CCCCCCCcccccccccccccCccCCCC--CC-CCCCc----------ccccCCCCCCCCCCCCCcEEEEEccCCCCCCCC
Q 047753           81 KTEDPNNYEKFDMNKLFVDEGEDEKRD--PN-KHDPS----------GSKRNPTLPNFLRPNKPRVLLVTGSSPKPCENP  147 (441)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~l~~~----------wl~~hp~~~~~~~~~~prIvIVT~sd~~~c~~~  147 (441)
                       ..             ..++.+++.++  .| +|||+          ||.+||+|+.+.. |+|+|+|||++++++|+|+
T Consensus        79 -~~-------------~~~~~~~~~~~~~~~y~lg~~i~~wd~~R~~wl~~~p~~~~~~~-g~prVviVT~sdp~~c~n~  143 (429)
T PLN03182         79 -LT-------------DLDEVEEERWDPNTPYTLGPKISDWDEQRRRWLRKNPGFPSFVN-GKPRVLLVTGSQPKPCENP  143 (429)
T ss_pred             -cc-------------cccccchhhcCCCCCcccCCCCCCHHHHHHHHHHhCCCCCCccC-CCCCEEEEeCCCCCcCCCc
Confidence             11             11233333333  66 99999          9999999998665 8899999999999999999


Q ss_pred             CchHHHHHHHHHHHHHHHHhCCcEEEeccccCccccCccchHHHHHHHHhcCCCccEEEEEeCCcceeccCCCCCccccC
Q 047753          148 VGDHYLLKSIKNKIDYCRIHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYK  227 (441)
Q Consensus       148 ~gd~yl~ksikNk~dYAr~HGY~~~~n~~~ld~~~~~~WaKip~LR~aM~a~P~aEWvwWLDsDAlImN~~~~Lple~~~  227 (441)
                      +|++||+++++||++||++|||+++|+++.++++++++|+|+|+||++|.+||++|||||||+||+||||+++||+++|+
T Consensus       144 ~gd~yLlks~kNK~dYAr~HGY~~fyn~~~ld~~~p~~WaKlpaLR~aM~~~PeaEWiWWLDsDALImNmsfelPlery~  223 (429)
T PLN03182        144 VGDHYLLKSLKNKIDYCRLHGIEIFYNMAHLDAEMAGFWAKLPLLRKLMLAHPEVEWIWWMDSDALFTDMTFEIPLEKYE  223 (429)
T ss_pred             ccHHHHHHHHHHHHHHHHHhCCEEEeehhhcCcCCCcchhHHHHHHHHHHHCCCceEEEEecCCceeecCCCCCCHhHcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCeeecCcccccccCCCCcccccccceeeccHHHHHHHHHhccCCCCCccccccchhhhhhhcCCCCCCCCchHHHHHH
Q 047753          228 DHNLVMHGWKEMVYDEKNWIGLNTGSFLLRNCQWALDLLDAWAPMGPKGKIRDDAGKILTRELKGRPVFEADDQSAMVYL  307 (441)
Q Consensus       228 d~nlVI~g~~dlIltq~dw~GLNtGsFLIRNs~WS~~fLd~Wa~m~P~~pv~~~~g~~l~~~~~~~~~~e~~DQsAL~~L  307 (441)
                      ++|+|||||.++++.++||+|||+|||||||||||++|||+|++|||++|+|++|||+|+++|+++|.||++|||||+||
T Consensus       224 ~~NlVihg~~~~l~~~kdW~GLNtGsFLIRNcqWSldlLDaWa~mgp~~~~~~~~g~~l~~~l~~rp~~eaDDQSAlvyL  303 (429)
T PLN03182        224 GYNLVIHGWDELVYDQKSWIGLNTGSFLIRNCQWSLDLLDAWAPMGPKGPIRDEAGKILTAELKGRPAFEADDQSALVYL  303 (429)
T ss_pred             CcCeeeccchhhheeccccCccceeeEEEEcCHHHHHHHHHHHhcCCCCchhhhHHHHHHHhhcCCCCCCcccHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCcccccceeEEecchhcccchhhhhhhhhhhhhccCCCCCCCCcCeEEEccCCccCCCCCCCcHHHHHHHhHhhhcC
Q 047753          308 LITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAFNF  387 (441)
Q Consensus       308 L~~~~~~w~~kv~l~~~y~~ngYw~~iv~~ye~~~~~y~~g~GD~r~pFVvHFaGC~~cg~~~~y~~~~C~~~m~ra~nf  387 (441)
                      |.+++++|++||++|++|||||||.+||++||+++++||+|.||+||||||||+|||||+++++|++++|+++|+|||||
T Consensus       304 l~~~~~~w~~kv~le~~y~l~Gyw~~iv~~yee~~~~~~~g~gd~rwPfvtHF~GckpC~~~~~y~~~~C~~~m~ra~nF  383 (429)
T PLN03182        304 LLTQRERWGDKVYLENSYYLHGYWVGLVDRYEEMMEKYHPGLGDDRWPFVTHFVGCKPCGGYGDYPVERCLKQMERAFNF  383 (429)
T ss_pred             HHhcchhhccceEEeecceeccccHHHHHHHHHHHHhcCCCCCCcccceeEeeccceecCCCCCcCHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CchhhhhhcCccccCCCcccccccccccCCcccchhhcCCCCccc
Q 047753          388 GDNQVLNMYGFEHRTLASKKVKRIRNETSTPLEVKDELGIRHPAF  432 (441)
Q Consensus       388 adnqvl~~yg~~h~~l~~~~v~~~~~~~~~pl~~~~~~~~~~~~~  432 (441)
                      ||||||++|||+|++|+|.+|+||||+|++||++++++++.++.+
T Consensus       384 aDnQvL~~yGf~H~~l~~~~v~~~~~~~~~pl~~~~~~~~~~~~~  428 (429)
T PLN03182        384 ADNQVLELYGFRHKSLASAEVKRVRNDTSNPLEAKDELGLRHPAF  428 (429)
T ss_pred             chHHHHHHhCccccccCccceeehhccCCCcchhhhhhcccCCCC
Confidence            999999999999999999999999999999999999998877654

>PLN03181 glycosyltransferase; Provisional	Back alignment and domain information

>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PF05637 Glyco_transf_34: galactosyl transferase GMA12/MNN10 family; InterPro: IPR008630 This family contains a number of glycosyltransferase enzymes that contain a DXD motif	Back alignment and domain information

>PF03314 DUF273: Protein of unknown function, DUF273; InterPro: IPR004988 This is a family of proteins of unknown function	Back alignment and domain information

>KOG4748 consensus Subunit of Golgi mannosyltransferase complex [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PF03407 Nucleotid_trans: Nucleotide-diphospho-sugar transferase; InterPro: IPR005069 Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases []	Back alignment and domain information

>PF01501 Glyco_transf_8: Glycosyl transferase family 8; InterPro: IPR002495 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>cd06914 GT8_GNT1 GNT1 is a fungal enzyme that belongs to the GT 8 family	Back alignment and domain information

>cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface	Back alignment and domain information

>cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen	Back alignment and domain information

>PLN00176 galactinol synthase	Back alignment and domain information

>cd00505 Glyco_transf_8 Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis	Back alignment and domain information

>cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>PRK15171 lipopolysaccharide 1,3-galactosyltransferase; Provisional	Back alignment and domain information

>cd06430 GT8_like_2 GT8_like_2 represents a subfamily of GT8 with unknown function	Back alignment and domain information

>cd06431 GT8_LARGE_C LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis	Back alignment and domain information

>PLN02829 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02769 Probable galacturonosyltransferase	Back alignment and domain information

>COG1442 RfaJ Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PLN02718 Probable galacturonosyltransferase	Back alignment and domain information

>PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase	Back alignment and domain information

>PLN02742 Probable galacturonosyltransferase	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		441
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-10
2p6w_A		213	VP54, putative glycosyltransferase (mannosyltransf	4e-09

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 62.9 bits (152), Expect = 1e-10
 Identities = 79/487 (16%), Positives = 143/487 (29%), Gaps = 111/487 (22%)

Query: 17  VIRHGKITLL--CLF----MTVIVLRGTIGAGKFGTPEQDIDDIRQH-------FYAH-R 62
           V R      L   L        +++ G +G+GK           +         F+ + +
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 63  KRVEPHRVLEEVQTTDAAKTEDPNNYEKFDMNKLFVDEGEDEKRDP-NKHDPSGSKRNPT 121
               P  VLE +Q              + D N  +    +         H      R   
Sbjct: 191 NCNSPETVLEMLQKL----------LYQIDPN--WTSRSDHSSNIKLRIHSIQAELRR-- 236

Query: 122 LPNFLRPNKPRVLLVTGSSPKPCENPVGDHYLLKSIKNK--IDY----CRIHGIEIFYNM 175
           L           LLV                 L +++N    +     C+I  +      
Sbjct: 237 L--LKSKPYENCLLV-----------------LLNVQNAKAWNAFNLSCKI--LLTTRFK 275

Query: 176 ALLDAEMAGFWAKLPLI-RKLLLSHPEVE--FLWWMDSDAMFTDMAFEV----P------ 222
            + D   A     + L    + L+  EV+   L ++D      D+  EV    P      
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRP--QDLPREVLTTNPRRLSII 333

Query: 223 WERYKDHNLVMHGWKEMVYDEKNWI---GLNT-GSFLLRNCQWALDLL--DAWAPMGP-- 274
            E  +D       WK +  D+   I    LN       R     L +    A  P     
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS 393

Query: 275 ---KGKIRDDAGKILTRELKGRPVFEADDQSAMVYLLITQRDKWGEKVYLESAYYLHGYW 331
                 I+ D   ++  +L    + E   + + + +     +    KV LE+ Y LH   
Sbjct: 394 LIWFDVIKSDVMVVVN-KLHKYSLVEKQPKESTISIPSIYLE---LKVKLENEYALH--- 446

Query: 332 GILVDRYEEMIENYHP-GLGDHR------WPLVTHFVGCKPCGKFGDYP--------VER 376
             +VD Y  + + +    L            +  H    +   +   +         +E+
Sbjct: 447 RSIVDHY-NIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQ 505

Query: 377 CLKQMDRAFNFGDN-----QVLNMYGFEHRTLASKKVKRIRNETSTPLEVKDELGIRHPA 431
            ++    A+N   +     Q L  Y   +      K +R+ N     L   +E  I    
Sbjct: 506 KIRHDSTAWNASGSILNTLQQLKFYK-PYICDNDPKYERLVNAILDFLPKIEENLICSKY 564

Query: 432 FKVVKVA 438
             ++++A
Sbjct: 565 TDLLRIA 571

PyMOL of 1vt4

>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A* Length = 213	Back alignment and structure

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		441
2p6w_A		213	VP54, putative glycosyltransferase (mannosyltransf	100.0
1g9r_A		311	Glycosyl transferase; alpha-beta structure; HET: U	95.73
1ll2_A		333	Glycogenin-1; protein-substrate complex, beta-alph	94.82
3u2u_A		263	Glycogenin-1, GN-1, GN1; structural genomics, stru	94.29
3tzt_A		276	Glycosyl transferase family 8; structural genomics	94.2

>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*	Back alignment and structure

Probab=100.00  E-value=8.8e-42  Score=317.66  Aligned_cols=185  Identities=24%  Similarity=0.474  Sum_probs=149.2

Q ss_pred             CCCcEEEEEccCCCCCCCCCchHHHHHHHHHHHHHHHHhCCcEEEecccc-Cc-cccCccchHHHHHHHHhcCCCccEEE
Q 047753          129 NKPRVLLVTGSSPKPCENPVGDHYLLKSIKNKIDYCRIHGIEIFYNMALL-DA-EMAGFWAKLPLIRKLLLSHPEVEFLW  206 (441)
Q Consensus       129 ~~prIvIVT~sd~~~c~~~~gd~yl~ksikNk~dYAr~HGY~~~~n~~~l-d~-~~~~~WaKip~LR~aM~a~P~aEWvw  206 (441)
                      .+|||+||||++|++|      +|++++++||++||++|||+++|+...+ +. ++.+.|.|.++||++|.+||++||||
T Consensus         4 ~~p~IllvtGs~p~ew------~yl~ksiKNK~DYArrHGYelfy~d~~l~k~~e~a~eW~ksW~IR~AM~khPeAEWfW   77 (213)
T 2p6w_A            4 TTPCITILSGHFPKET------IYARKTKELVEEYCSIHGYNFYYEESEPLETEEHALHFRRSWIIQQAAEKFPSTEWFL   77 (213)
T ss_dssp             --CCEEEEEECSCTTC------HHHHHHHHHHHHHHHHHTCEEEEECSCCSCCSHHHHHHTHHHHHHHHHHHCTTCSEEE
T ss_pred             CCceEEEEeCCCCCCc------HHHHHHHHHHHHHHHHcCCeEEEeecccccchhhcccchhhHHHHHHHHHCCCceEEE
Confidence            4799999999999987      8999999999999999999999975544 33 37788999999999999999999999


Q ss_pred             EEeCCcceeccCCCCCcccc---CCCCeeecCcccccccCCCCcccccccce-------eeccHHHHHHHHHhccCCCCC
Q 047753          207 WMDSDAMFTDMAFEVPWERY---KDHNLVMHGWKEMVYDEKNWIGLNTGSFL-------LRNCQWALDLLDAWAPMGPKG  276 (441)
Q Consensus       207 WLDsDAlImN~~~~Lple~~---~d~nlVI~g~~dlIltq~dw~GLNtGsFL-------IRNs~WS~~fLd~Wa~m~P~~  276 (441)
                      |||+||+||||++++|++++   +++|+|+|||.+.++++   .||||||||       |||||||++|||+|++| |  
T Consensus        78 WLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~---~~lNtGvfL~~~~~~~irncqWSld~~~~w~~~-~--  151 (213)
T 2p6w_A           78 WLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGS---YPINTGVKFVHKDALEIEKIVWSLRNEAPWNTF-P--  151 (213)
T ss_dssp             EECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSS---SSCCTTEEEEEGGGHHHHHHHHHTTTSTTTTST-T--
T ss_pred             EecCCceeecCCCCCcHHHccccccCceeecccccccccc---ccccceeeeecccchhhhhceeehhhhhcccCC-C--
Confidence            99999999999999999998   99999999998887765   499999999       99999999999999987 3  


Q ss_pred             ccccccchhhhhhhcCCCCCCCCchHH-HHHHHHhCcccccceeEEecchhcccchhhhhhhhhhhhhccCCCCCCCCcC
Q 047753          277 KIRDDAGKILTRELKGRPVFEADDQSA-MVYLLITQRDKWGEKVYLESAYYLHGYWGILVDRYEEMIENYHPGLGDHRWP  355 (441)
Q Consensus       277 pv~~~~g~~l~~~~~~~~~~e~~DQsA-L~~LL~~~~~~w~~kv~l~~~y~~ngYw~~iv~~ye~~~~~y~~g~GD~r~p  355 (441)
                                            .||.. .+|+.-.-+    .+..+-..|.+|+.    |..|.+...       |   .
T Consensus       152 ----------------------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~-------~---~  191 (213)
T 2p6w_A          152 ----------------------YEQKTVYEYVFPRIP----GRYIVHDPYTLNCI----VKAYPEHVK-------D---A  191 (213)
T ss_dssp             ----------------------THHHHHHHTHHHHST----TSEEEECCTTTSEE----TTTCTTTGG-------G---C
T ss_pred             ----------------------cccceeeeeeccCCC----cceEecCcceeeee----hhhchhhhh-------h---h
Confidence                                  24443 455554333    34445567888764    333332211       1   2


Q ss_pred             eEEEccCCcc
Q 047753          356 LVTHFVGCKP  365 (441)
Q Consensus       356 FVvHFaGC~~  365 (441)
                      +.||++|..-
T Consensus       192 ~~~~~~~~~~  201 (213)
T 2p6w_A          192 LFVHMCGTSR  201 (213)
T ss_dssp             SEEECTTCCH
T ss_pred             hhhhhccCcc
Confidence            8899988763

PyMOL of 2p6w

>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*	Back alignment and structure

>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*	Back alignment and structure

>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A	Back alignment and structure

>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		441
d1ga8a_		282	Galactosyltransferase LgtC {Neisseria meningitidis	97.19
d1ll2a_		263	Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId:	96.65

>d1ga8a_ c.68.1.4 (A:) Galactosyltransferase LgtC {Neisseria meningitidis [TaxId: 487]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Galactosyltransferase LgtC
domain: Galactosyltransferase LgtC
species: Neisseria meningitidis [TaxId: 487]

Probab=97.19  E-value=0.00089  Score=61.41  Aligned_cols=56  Identities=14%  Similarity=0.102  Sum_probs=33.6

Q ss_pred             HHHHHhCCcEEE-ec--cccC--ccccCccchHHHHHHHHhc-CCCccEEEEEeCCcceecc
Q 047753          162 DYCRIHGIEIFY-NM--ALLD--AEMAGFWAKLPLIRKLLLS-HPEVEFLWWMDSDAMFTDM  217 (441)
Q Consensus       162 dYAr~HGY~~~~-n~--~~ld--~~~~~~WaKip~LR~aM~a-~P~aEWvwWLDsDAlImN~  217 (441)
                      .+...++..+.+ ..  ..+.  +.....|++..+.|=.+-. .|+++-+.|||+|++|...
T Consensus        50 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~~lp~~~kiiyLD~D~iv~~d  111 (282)
T d1ga8a_          50 ANLRGGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDS  111 (282)
T ss_dssp             HTSGGGTTTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSC
T ss_pred             HHHHHcCCeEEEEECCchHhccccccccccCHHHHHHHHHhhhCCccceEEEecCCEEEecc
Confidence            344567777764 22  1121  2233445555544433322 4889999999999999874

PyMOL of d1ga8a_

>d1ll2a_ c.68.1.14 (A:) Glycogenin {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure