Citrus Sinensis ID: 047775

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380------
Protein Sequence
MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL
Secondary Structure (PSIPRED)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHccccccccccccHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHHHHHccccccHHHHHHHHHHHccEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccHHHHHccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcHHEEEEEHHHHHHHHHHHHHHcccccHHcccHHHccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHcEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHEEEHHHHHHHHHHHHHHHHHHHHcccHEEEEHHHEHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccccHHHHHccc
Coil and Loop (DISEMBL)
MGWRYRAGLFLISAVVIIWVTSAEVTQDifsdykqpfavTYLGASLMVVYLPVAFLKDWFCNLLkrrssksvkdaetLNETSAALNSPMRHRVFEMELqgtfnkkdseldlssseegmplvsklkddahkepttreiATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGktwaadesqfsaangkrslVGDLFGLLSAMSYGLFTVLLKKFcgeegekidVQKLFGYIGLFTLVALWWLVWpltalgiepkftiphsaKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL
Flexible Loop (DISEMBL)
MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRrssksvkdaetlnetsaalnspmrhRVFEMELQGTFNKKDSELDLSSSEEGMPLvsklkddahkepttreiatigFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL
Low Complexity Region (SEG)
MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKdseldlssseeGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARtsvasttvlsstsglftlfIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL
Disordered region (IsUnstruct)
**WRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLK**********************************************************************EIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVS*********
Disordered Region (DISOPRED)
MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSV***********************************************************PTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTW**********NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLS*KLG*
Disordered Region (DISEMBL)
MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRS*********LNETSAALNSPMRHRVFEMELQGTFNKKD*********EGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL
Disordered Region (DISPRO)
MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRR**************************************************************KEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT*************KRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLS*****
Transmembrane Helix (TMHMM)
iiiiHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	386	2.2.26 [Sep-21-2011]
Q03730	393	Uncharacterized vacuolar	yes	no	0.898	0.882	0.314	3e-46
A6QL92	524	Solute carrier family 35	yes	no	0.924	0.681	0.297	8e-37
Q5R6J3	523	Solute carrier family 35	yes	no	0.932	0.688	0.302	9e-37
Q8WV83	523	Solute carrier family 35	yes	no	0.932	0.688	0.300	2e-36
Q8R314	524	Solute carrier family 35	yes	no	0.932	0.687	0.292	3e-36
Q4R794	432	Solute carrier family 35	N/A	no	0.601	0.537	0.331	4e-31
O94654	341	Uncharacterized transport	yes	no	0.813	0.920	0.303	4e-31
Q04083	370	Thiamine-repressible mito	no	no	0.836	0.872	0.303	1e-26

>sp|Q03730|YMB8_YEAST Uncharacterized vacuolar membrane protein YML018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML018C PE=1 SV=1

 Score =  186 bits (471), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 203/388 (52%), Gaps = 41/388 (10%)

Query: 4   RYRAGLFLISAVVIIWVTSAEVTQDIFSD--YKQPFAVTYLGASLMVVYL-PVAFLKDWF 60
           R+  GL ++  V+I+WV S+ +   IF D  Y++PF +TY   +  + YL P A      
Sbjct: 12  RWTLGLLMLGLVIILWVLSSFLINLIFEDDSYRKPFFITYTNTAAFIFYLFPTA------ 65

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPL 120
                +    + KD    N           HR   ME +GT +  +  +D++S     PL
Sbjct: 66  -----KAVVVNYKDTGRAN----------VHRELIMEEEGTGSDSNRSVDMTS-----PL 105

Query: 121 VSKLKDDAH----KEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGL 176
           ++ L+   H    K  T  E   +      +WF     +NA+LA TSVAS T+LS+TS  
Sbjct: 106 LTNLEAGTHANQKKRLTLYETIKLSAEFCILWFTANLVTNASLAFTSVASQTILSTTSSF 165

Query: 177 FTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRS-----LV 231
           FTLFIGA    ++L+ +KV+   +S  G+ M T   +    +   +  +G  +     L+
Sbjct: 166 FTLFIGAICHVESLSKSKVLGSFISFVGIIMVTKSDSHQRYQRHIADVSGDDNDAVQVLI 225

Query: 232 GDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIE 291
           G+L  L  A+ YG+++ LLK+  G+E  +++++  FG++GLF L+ LW  +  L   G E
Sbjct: 226 GNLLALAGAVLYGVYSTLLKREVGDE-TRVNMKIFFGFVGLFNLLFLWPSLIVLDFFGWE 284

Query: 292 PKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVI 351
           P F++P   K+  ++  N  + + +SD+ WA  ++ T+PL  T+G+S+TIPLAM  D++ 
Sbjct: 285 P-FSLPKDPKVVVIIFVNCLI-TFVSDFCWAKAMLLTSPLTVTVGLSITIPLAMFGDVIF 342

Query: 352 HGRHYSAIYILGSAQVFAGFVIVNVSDR 379
             +  SA+Y+ G+  +   F I+N S  
Sbjct: 343 KHKTMSALYLFGATLILGSFFIINKSSE 370

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|A6QL92|S35F5_BOVIN Solute carrier family 35 member F5 OS=Bos taurus GN=SLC35F5 PE=2 SV=1

 Score =  154 bits (390), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/414 (29%), Positives = 199/414 (48%), Gaps = 57/414 (13%)

Query: 4   RYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFL--KDWFC 61
           R   G+ ++  V +IWV S+E+T  +F+ Y +PF  T+   S+ V+YL + F+  K W  
Sbjct: 68  RMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYL-LGFIVWKPWRQ 126

Query: 62  NLLKRRSSKSVK---DAE----------TLNET-SAALNSPMRHRVFEMELQGTFN---- 103
              +    K      DAE          T+N + S  L  P++      E     N    
Sbjct: 127 QCTRGFRGKHATFFADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSEKPENTNIDTE 186

Query: 104 --KKDSELDLSSSEEGMPLVSKLKDDAH----KEPTTRE---------------IATIGF 142
              K S +  S+  E   L S    +A       PT +E               +A I F
Sbjct: 187 KIPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSYPTVKEQESLLKTVGKLTATQVAKISF 246

Query: 143 YIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQ---DTLNVAKVVAVL 199
           +   +WF+  +    AL+ T VA   +LSSTSGLFTL + A       D   ++K++AV+
Sbjct: 247 FFCFVWFLANFSYQEALSDTQVAIVNILSSTSGLFTLILAAMFPSNSGDRFTLSKLLAVI 306

Query: 200 VSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGE 259
           +S+ GV +  L           S  +  R+ +G ++ L+ AM Y ++ V++K+    E +
Sbjct: 307 LSIGGVVLVNLSG---------SEKSPGRNTIGSIWSLVGAMLYAVYIVMIKRKVDRE-D 356

Query: 260 KIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDY 319
           K+D+   FG++GLF L+ LW   + L   G E  F  P+   +  +V+ NG +G+VLS++
Sbjct: 357 KLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE-DFEFPNKVVLMCIVI-NGLIGTVLSEF 414

Query: 320 FWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVI 373
            W      T+ L+ TL +SLTIPL+++ADM +    +S ++  G+  VF  F I
Sbjct: 415 LWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFI 468

Putative solute transporter.

Bos taurus (taxid: 9913)

>sp|Q5R6J3|S35F5_PONAB Solute carrier family 35 member F5 OS=Pongo abelii GN=SLC35F5 PE=2 SV=1

 Score =  154 bits (390), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 126/416 (30%), Positives = 206/416 (49%), Gaps = 56/416 (13%)

Query: 4   RYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFL--KDWF- 60
           R   G+ ++  V +IWV S+E+T  +F+ Y +PF  T+   S+ V+YL + F+  K W  
Sbjct: 68  RMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYL-LGFIIWKPWRQ 126

Query: 61  -CNL-LKRRSSKSVKDAE----------TLNET-SAALNSPMRHRVFEMELQGTFN---- 103
            C   L+ + +    DAE          T+N + S  L  P++      E   + N    
Sbjct: 127 QCTRGLRGKHAAFFADAEGYFAACATDTTMNSSLSEPLYVPVKFHDLPSEKPESTNIDTE 186

Query: 104 --KKDSELDLSSSEE--GMP----LVSKLKDDAH--KEP----------TTREIATIGFY 143
              K S +  S+  E   +P    L SKL   ++  KE           T  ++A I F+
Sbjct: 187 KTPKKSRVRFSNIMEIRQLPSNHALESKLSRMSYPVKEQESILKTVGKLTATQVAKISFF 246

Query: 144 IAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQ---DTLNVAKVVAVLV 200
              +WF+       AL+ T VA   +LSSTSGLFTL + A       D   ++K++AV++
Sbjct: 247 FCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVIL 306

Query: 201 SMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEK 260
           S+ GV +  L           S  +  R  +G ++ L  AM Y ++ V++K+    E +K
Sbjct: 307 SIGGVVLVNLSG---------SEKSAGRDTIGSIWSLAGAMLYAVYIVMIKRKVDRE-DK 356

Query: 261 IDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYF 320
           +D+   FG++GLF L+ LW   + L   G E  F  P+   +  +++ NG +G+VLS++ 
Sbjct: 357 LDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE-DFEFPNKVVLMCIII-NGLIGTVLSEFL 414

Query: 321 WALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376
           W      T+ L+ TL +SLTIPL+++ADM +    +S ++  G+  VF  F IV +
Sbjct: 415 WLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTL 470

Putative solute transporter.

Pongo abelii (taxid: 9601)

>sp|Q8WV83|S35F5_HUMAN Solute carrier family 35 member F5 OS=Homo sapiens GN=SLC35F5 PE=2 SV=1

 Score =  153 bits (387), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 201/416 (48%), Gaps = 56/416 (13%)

Query: 4   RYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFL--KDWF- 60
           R   G+ ++  V +IWV S+E+T  +F+ Y +PF  T+   S+ V+YL + F+  K W  
Sbjct: 68  RMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYL-LGFIIWKPWRQ 126

Query: 61  -CNL-LKRRSSKSVKDAE----------TLNET-SAALNSPMRHRVFEMELQGTFN---- 103
            C   L+ + +    DAE          T+N + S  L  P++      E   + N    
Sbjct: 127 QCTRGLRGKHAAFFADAEGYFAACTTDTTMNSSLSEPLYVPVKFHDLPSEKPESTNIDTE 186

Query: 104 --KKDSELDLSSSEEGMPLVSKLKDDAH--------KEP----------TTREIATIGFY 143
              K S +  S+  E   L S    +A         KE           T  ++A I F+
Sbjct: 187 KTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSYPVKEQESILKTVGKLTATQVAKISFF 246

Query: 144 IAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQ---DTLNVAKVVAVLV 200
              +WF+       AL+ T VA   +LSSTSGLFTL + A       D   ++K++AV++
Sbjct: 247 FCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVIL 306

Query: 201 SMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEK 260
           S+ GV +  L           S     R  VG ++ L  AM Y ++ V++K+    E +K
Sbjct: 307 SIGGVVLVNLAG---------SEKPAGRDTVGSIWSLAGAMLYAVYIVMIKRKVDRE-DK 356

Query: 261 IDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYF 320
           +D+   FG++GLF L+ LW   + L   G E  F  P+   +  +++ NG +G+VLS++ 
Sbjct: 357 LDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE-DFEFPNKVVLMCIII-NGLIGTVLSEFL 414

Query: 321 WALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376
           W      T+ L+ TL +SLTIPL+++ADM +    +S ++  G+  VF  F IV +
Sbjct: 415 WLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTL 470

Putative solute transporter.

Homo sapiens (taxid: 9606)

>sp|Q8R314|S35F5_MOUSE Solute carrier family 35 member F5 OS=Mus musculus GN=Slc35f5 PE=2 SV=1

 Score =  152 bits (385), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 201/417 (48%), Gaps = 57/417 (13%)

Query: 4   RYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFL--KDWFC 61
           R   G+ ++  V +IWV S+E+T  +F+ Y +PF  T+   S+ V+YL + F+  K W  
Sbjct: 68  RMALGIVILLLVDVIWVASSELTSYVFTQYNKPFFSTFAKTSMFVLYL-LGFIIWKPWRQ 126

Query: 62  NLLKRRSSKSVK---DAE-------TLNETSAALNSPMR-----HRVFEMELQGTF---- 102
              +    K      DAE       T    S++L+ P+      H +   +L+ T     
Sbjct: 127 QCTRGFRGKPAAFFADAEGYFAACTTDTSMSSSLSEPLYVPVKFHDLPSEKLESTNIGTE 186

Query: 103 -NKKDSELDLSSSEEGMPLVSKLKDDAH----KEPTTR---------------EIATIGF 142
              K S +  S+  E   L S    +A       PT +               ++A I F
Sbjct: 187 KTPKKSRVRFSNIMEIRQLPSSHALEAKLSRMSYPTVKDQESILKTVGKLTATQVAKISF 246

Query: 143 YIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQ---DTLNVAKVVAVL 199
           +   +WF+       AL+ T VA   +LSSTSGLFTL + A       D   ++K++AV+
Sbjct: 247 FFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDRFTLSKLLAVI 306

Query: 200 VSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGE 259
           +S+ GV +  L           S  +  R  +G ++ L  AM Y ++ V++K+    E +
Sbjct: 307 LSIGGVVLVNLSG---------SEKSAGRDTIGSIWSLAGAMFYAVYIVMIKRKVDRE-D 356

Query: 260 KIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDY 319
           K+D+   FG++GLF L+ LW   + L   G E  F  P+   +  +++ NG +G+VLS++
Sbjct: 357 KLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE-DFEFPNKVVLLCIII-NGLIGTVLSEF 414

Query: 320 FWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376
            W      T+ L+ TL +SLTIPL+++ADM +    +S ++  G+  VF  F IV +
Sbjct: 415 LWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFFSFFIVTL 471

Putative solute transporter.

Mus musculus (taxid: 10090)

>sp|Q4R794|S35F5_MACFA Solute carrier family 35 member F5 OS=Macaca fascicularis GN=SLC35F5 PE=2 SV=1

 Score =  135 bits (341), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 136/247 (55%), Gaps = 15/247 (6%)

Query: 133 TTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQ---DT 189
           T  ++A I F+   +WF+       AL+ T VA   +LSSTSGLFTL + A       D 
Sbjct: 145 TATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDR 204

Query: 190 LNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVL 249
             ++K++AV++S+ GV +  L           S  +  R+ +G ++ L  AM Y ++ V+
Sbjct: 205 FTLSKLLAVILSIGGVVLVNLSG---------SEKSAGRNTIGSIWSLAGAMLYAVYIVM 255

Query: 250 LKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLAN 309
           +K+    E +K+D+   FG++GLF L+ LW   + L   G E  F  P+   +  +++ N
Sbjct: 256 IKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFE-DFEFPNKVVLMCIII-N 312

Query: 310 GFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFA 369
           G +G+VLS++ W      T+ L+ TL +SLTIPL+++ADM +    +S ++  G+  VF 
Sbjct: 313 GLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFF 372

Query: 370 GFVIVNV 376
            F IV +
Sbjct: 373 SFFIVTL 379

Putative solute transporter.

Macaca fascicularis (taxid: 9541)

>sp|O94654|YGF3_SCHPO Uncharacterized transporter C405.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC405.03c PE=3 SV=1

 Score =  135 bits (341), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 189/363 (52%), Gaps = 49/363 (13%)

Query: 19  WVTSAEVTQDIFSD--YKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAE 76
           W+ S+ +T  +  D  +  PF +TY+     V YL       W+ +  K R         
Sbjct: 23  WLISSFLTSSLLDDDNFFSPFLITYINTGTFVFYL-----IPWYFSEKKTR--------- 68

Query: 77  TLNETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTRE 136
                        +HR+   EL    +  DS  +L +     PL    +  A+       
Sbjct: 69  -------------KHRLMS-ELSMYESVHDSSFNLGTRPNS-PL--GFRQTAY------- 104

Query: 137 IATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVV 196
             ++GF I  IWF   YFSN++L  T+VAS T++SS SG FTL +G  +  +   ++K++
Sbjct: 105 -LSLGFCI--IWFAANYFSNSSLGFTNVASFTIISSMSGFFTLGLGTIVNVERFTLSKLL 161

Query: 197 AVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGE 256
           A++ S+ GV +     T  A ++  + +   R  +G+ + LL+A+ YG ++V++K    E
Sbjct: 162 ALMASVGGVIIVV---TQDAKQADLNDSPPSRPALGNAYALLAALLYGCYSVMVKFHITE 218

Query: 257 EGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVL 316
           E   +  +  FG +GLF L+ LW  +  L   G+E +F++P +     V++ N  + + +
Sbjct: 219 E-SCVSTRLFFGLVGLFDLILLWPFLIILHLYGVE-RFSLPSTTAGLIVLIINASI-TFV 275

Query: 317 SDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV 376
           SDY W + ++ T+PL+ T+GMSL+IPLA+  D+++ G + +   ILGS  VFAGF++VN 
Sbjct: 276 SDYLWVIAMLMTSPLLVTVGMSLSIPLALFFDILLKGHYLNFSLILGSLLVFAGFIVVNY 335

Query: 377 SDR 379
           + +
Sbjct: 336 NQQ 338

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|Q04083|THI74_YEAST Thiamine-repressible mitochondrial transport protein THI74 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=THI74 PE=1 SV=1

 Score =  120 bits (302), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 179/359 (49%), Gaps = 36/359 (10%)

Query: 19  WVTSAEVTQDIF--SDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAE 76
           WV ++ +T ++   + Y +PF +TYL  S   +YL      D +  +  RR S   +   
Sbjct: 24  WVGASCLTNELLETNAYNKPFFLTYLNISSFALYLT----PDLWRIIQSRRKSLQERTER 79

Query: 77  TLNETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTRE 136
           TL         P+  +    E    F    S    +SS       +K+KD      T R 
Sbjct: 80  TL---------PIHTQ----ESFSEFLPLLSSTPSTSSNLSSIADTKVKD------TMR- 119

Query: 137 IATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVV 196
              +      +WFV    +NAAL+ T+VAS+T+LSSTS  FTLF+   +G +T +  K++
Sbjct: 120 ---LSLLFCVLWFVANLAANAALSYTTVASSTILSSTSSFFTLFLATSLGIETFSTKKLL 176

Query: 197 AVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGE 256
            + VS+ G+ +  +  +   D     + +    LVG+   LL ++ Y ++T LLK     
Sbjct: 177 GLFVSLFGIILIVMQSSKQQD-----SVSASSFLVGNTLALLGSLGYSVYTTLLKYEISS 231

Query: 257 EGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVL 316
           +G ++D+Q   GY+G+FT +  W ++  L    +E  F +P +  +  +V+ N  +  V 
Sbjct: 232 KGLRLDIQMFLGYVGIFTFLLFWPILIILDITHME-TFELPSNFHISFLVMLNCIIIFV- 289

Query: 317 SDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVN 375
           SDYFW   ++ T+PLV T+ ++ TIPLAM AD V     ++  YI+G   +F  F +VN
Sbjct: 290 SDYFWCKALILTSPLVVTVALTFTIPLAMFADFVWREAFFTPWYIIGVIFIFVSFFLVN 348

May be involved in thiaminediphosphate transport across the mitochondrial membrane.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	386
147792538	396	hypothetical protein VITISV_001627 [Viti	1.0	0.974	0.828	0.0
255548852	392	conserved hypothetical protein [Ricinus	1.0	0.984	0.839	0.0
225430460	396	PREDICTED: uncharacterized vacuolar memb	1.0	0.974	0.828	0.0
224089286	391	predicted protein [Populus trichocarpa]	0.997	0.984	0.839	0.0
356515282	394	PREDICTED: uncharacterized vacuolar memb	0.997	0.977	0.802	0.0
356507620	392	PREDICTED: uncharacterized vacuolar memb	0.994	0.979	0.802	1e-180
388497358	393	unknown [Lotus japonicus]	0.997	0.979	0.771	1e-174
297798744	391	hypothetical protein ARALYDRAFT_491520 [	0.994	0.982	0.788	1e-174
449437164	390	PREDICTED: uncharacterized vacuolar memb	0.997	0.987	0.774	1e-174
449517195	390	PREDICTED: uncharacterized vacuolar memb	0.997	0.987	0.769	1e-173

>gi|147792538|emb|CAN72310.1| hypothetical protein VITISV_001627 [Vitis vinifera]

 Score =  662 bits (1707), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/396 (82%), Positives = 356/396 (89%), Gaps = 10/396 (2%)

Query: 1   MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
           M W+YRAGLFLI+AVV+IWVTSAEVTQDIF DYKQPFAVTYLGASLMVVYLP+AF+KDW 
Sbjct: 1   MSWKYRAGLFLIAAVVVIWVTSAEVTQDIFIDYKQPFAVTYLGASLMVVYLPIAFIKDWL 60

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMRH----RVFEMELQGTFNKKDSELDLSSSEE 116
           CN LKRRSSKS K+AETLNE+SA LNSP++H    + FE+E  GT  +KDSE D S+ EE
Sbjct: 61  CNSLKRRSSKSGKNAETLNESSAGLNSPLKHIGGQKTFELEHLGTLPRKDSETDYSAYEE 120

Query: 117 GMPLVSKLKDDA-----HKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLS 171
           G PLVSK +DD       K  TTR+IA  GFYIAPIWF+TEYFSNAALARTSVASTTVLS
Sbjct: 121 GRPLVSKRRDDTDLLKQEKALTTRQIAIYGFYIAPIWFITEYFSNAALARTSVASTTVLS 180

Query: 172 STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAA-NGKRSL 230
           STSGLFTLFIGA +GQD+LNVAK+VAV VSMAGVAMTT+GKTWA DES+ SA+ NGKRSL
Sbjct: 181 STSGLFTLFIGALLGQDSLNVAKLVAVFVSMAGVAMTTMGKTWATDESKLSASLNGKRSL 240

Query: 231 VGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGI 290
           VGDLFGLLSAMSYGLFTVLLKKF GEEGE++DVQKLFGYIGLFTLVALWWLVWPLTALGI
Sbjct: 241 VGDLFGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLVWPLTALGI 300

Query: 291 EPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMV 350
           EPKFTIPHSAKM+EVV+ANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADM+
Sbjct: 301 EPKFTIPHSAKMDEVVIANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMM 360

Query: 351 IHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
           IHGRHYSAIYILGSAQVFAGFVI N+SD  SKKLGL
Sbjct: 361 IHGRHYSAIYILGSAQVFAGFVIANLSDWFSKKLGL 396

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255548852|ref|XP_002515482.1| conserved hypothetical protein [Ricinus communis] gi|223545426|gb|EEF46931.1| conserved hypothetical protein [Ricinus communis]

 Score =  660 bits (1704), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/392 (83%), Positives = 349/392 (89%), Gaps = 6/392 (1%)

Query: 1   MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
           M WRY+AGLFLI+AVVIIWVTSAEVTQ IF+DYKQPFAVTYLGASLMVVYLP+AFLKDW 
Sbjct: 1   MSWRYKAGLFLIAAVVIIWVTSAEVTQGIFTDYKQPFAVTYLGASLMVVYLPIAFLKDWI 60

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPL 120
           C +LK RSSKS KDA +LNE S  LNSP+  ++FEMELQGT  +KDSE DLSS  EG PL
Sbjct: 61  CKILKHRSSKSGKDAGSLNECSDGLNSPLSQKIFEMELQGTLTRKDSEADLSSEAEGKPL 120

Query: 121 VSKLKDDAH-----KEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSG 175
           V + KDD +     KE TTREIAT GFYIAPIWFVTEY SNAALARTSVASTTVLSSTSG
Sbjct: 121 VPRHKDDLNVLKHDKELTTREIATYGFYIAPIWFVTEYLSNAALARTSVASTTVLSSTSG 180

Query: 176 LFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAA-NGKRSLVGDL 234
           LFTLFIG F+GQDTLN AKV AVLVSMAGV MT LGKTWAADESQ S + NGKRS VGDL
Sbjct: 181 LFTLFIGVFLGQDTLNAAKVAAVLVSMAGVVMTALGKTWAADESQLSTSINGKRSFVGDL 240

Query: 235 FGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKF 294
           FGLLSAMSYGLFTVLLKKF GEEGE++DVQKLFGYIGLFTLVALWWLV PLTALGIEPKF
Sbjct: 241 FGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLVLPLTALGIEPKF 300

Query: 295 TIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGR 354
           TIPHSAKM+EVVLANGF+GSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGR
Sbjct: 301 TIPHSAKMDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGR 360

Query: 355 HYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
           HYSAIYILGSAQVFAGFVI N+SD  S+KLGL
Sbjct: 361 HYSAIYILGSAQVFAGFVIANLSDWFSRKLGL 392

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430460|ref|XP_002285494.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C [Vitis vinifera] gi|296082125|emb|CBI21130.3| unnamed protein product [Vitis vinifera]

 Score =  660 bits (1702), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 328/396 (82%), Positives = 355/396 (89%), Gaps = 10/396 (2%)

Query: 1   MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
           M W+YRAGLFLI+AVV+IWVTSAEVTQ IF DYKQPFAVTYLGASLMVVYLP+AF+KDW 
Sbjct: 1   MSWKYRAGLFLIAAVVVIWVTSAEVTQGIFIDYKQPFAVTYLGASLMVVYLPIAFIKDWL 60

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMRH----RVFEMELQGTFNKKDSELDLSSSEE 116
           CN LKRRSSKS K+AETLNE+SA LNSP++H    + FE+E  GT  +KDSE D S+ EE
Sbjct: 61  CNSLKRRSSKSGKNAETLNESSAGLNSPLKHIGGQKTFELEHLGTLPRKDSETDYSAYEE 120

Query: 117 GMPLVSKLKDDA-----HKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLS 171
           G PLVSK +DD       K  TTR+IA  GFYIAPIWF+TEYFSNAALARTSVASTTVLS
Sbjct: 121 GRPLVSKRRDDTDLLKQEKALTTRQIAIYGFYIAPIWFITEYFSNAALARTSVASTTVLS 180

Query: 172 STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAA-NGKRSL 230
           STSGLFTLFIGA +GQD+LNVAKVVAV VSMAGVAMTT+GKTWA DES+ SA+ NGKRSL
Sbjct: 181 STSGLFTLFIGALLGQDSLNVAKVVAVFVSMAGVAMTTMGKTWATDESKLSASLNGKRSL 240

Query: 231 VGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGI 290
           VGDLFGLLSAMSYGLFTVLLKKF GEEGE++DVQKLFGYIGLFTLVALWWLVWPLTALGI
Sbjct: 241 VGDLFGLLSAMSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLVALWWLVWPLTALGI 300

Query: 291 EPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMV 350
           EPKFTIPHSAKM+EVV+ANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADM+
Sbjct: 301 EPKFTIPHSAKMDEVVIANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMM 360

Query: 351 IHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
           IHGRHYSAIYILGSAQVFAGFVI N+SD  SKKLGL
Sbjct: 361 IHGRHYSAIYILGSAQVFAGFVIANLSDWFSKKLGL 396

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224089286|ref|XP_002308677.1| predicted protein [Populus trichocarpa] gi|222854653|gb|EEE92200.1| predicted protein [Populus trichocarpa]

 Score =  656 bits (1692), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/392 (83%), Positives = 356/392 (90%), Gaps = 7/392 (1%)

Query: 1   MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
           MGWRYRAGLFLI+AVVIIWVTSAEVTQDIF+DYKQPFAVTYLGASL+VVYLPVAFLKDW 
Sbjct: 1   MGWRYRAGLFLIAAVVIIWVTSAEVTQDIFADYKQPFAVTYLGASLLVVYLPVAFLKDWT 60

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPL 120
            NLLKR+SSKS  DA  +N +S  L+SP+  ++FEMELQGT  KKDSELDL+SSEEG PL
Sbjct: 61  RNLLKRQSSKSGNDATNVNGSSDELSSPLSRKIFEMELQGTLTKKDSELDLASSEEGKPL 120

Query: 121 VSKLKDDAH-----KEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSG 175
           VS+ KDD +     KEPT REIA  GFYIAPIWFVTEY SNAALARTSVASTTVLSSTSG
Sbjct: 121 VSRHKDDLNVLIHDKEPTIREIAMCGFYIAPIWFVTEYLSNAALARTSVASTTVLSSTSG 180

Query: 176 LFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAA-NGKRSLVGDL 234
           LFTLFIG F+GQD+LN AKV+AVLVSMAGVAMTTLGKTWAADES  SA+ NGKRSLVGDL
Sbjct: 181 LFTLFIGVFLGQDSLNAAKVIAVLVSMAGVAMTTLGKTWAADESPLSASTNGKRSLVGDL 240

Query: 235 FGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKF 294
           FGLLSA+SYGLFTVLLKKF GE GE++DVQKLFGYIGLFTLVALWWLVWPLTALGIEPKF
Sbjct: 241 FGLLSAVSYGLFTVLLKKFAGE-GERVDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKF 299

Query: 295 TIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGR 354
           TIPHSAK++E+VLANGFVGSVLSDYFWAL VVWTTPLVATLGMSLTIPLAM+ADMVIHGR
Sbjct: 300 TIPHSAKVDEIVLANGFVGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMLADMVIHGR 359

Query: 355 HYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
           HYSAIYILGSAQVFAGF+I N+S+  SKKLGL
Sbjct: 360 HYSAIYILGSAQVFAGFMIANLSNWFSKKLGL 391

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515282|ref|XP_003526330.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Glycine max]

 Score =  640 bits (1652), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 317/395 (80%), Positives = 351/395 (88%), Gaps = 10/395 (2%)

Query: 1   MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
           MGWRY AGLFLI  VVIIWVTSAEVTQDIF+DYKQPFAVTYLGASLMVVYLP+AF+KDWF
Sbjct: 1   MGWRYNAGLFLIVTVVIIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWF 60

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMR----HRVFEMELQGTFNKKDSELDLSSSEE 116
           CNLLK RSSKS K+AE ++E S  ++SP++     + FE+EL G+ N+KDS+LDLS+  E
Sbjct: 61  CNLLKSRSSKSGKNAECVDEFSVRISSPLKSNGVQKNFELEL-GSVNRKDSDLDLSTLAE 119

Query: 117 GMPLVSKLKDDAH-----KEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLS 171
             PLV+K  D+ +     ++   +EIA  GFYIAPIWF+TEY SNAALARTSVASTTVLS
Sbjct: 120 VKPLVAKYNDNTNVLKVERQLNGKEIAAYGFYIAPIWFITEYLSNAALARTSVASTTVLS 179

Query: 172 STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLV 231
           STSGLFTLFIGAFMGQD+LNVAKVVAVLVSMAGV MTTLGKTWAADESQ S A+GK SLV
Sbjct: 180 STSGLFTLFIGAFMGQDSLNVAKVVAVLVSMAGVVMTTLGKTWAADESQLSDASGKHSLV 239

Query: 232 GDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIE 291
           GDLFG+LSAMSYGLFTVLLKKF GEEGE++DVQKLFGYIGLFTLVALWWLVWPL ALGIE
Sbjct: 240 GDLFGILSAMSYGLFTVLLKKFSGEEGERVDVQKLFGYIGLFTLVALWWLVWPLMALGIE 299

Query: 292 PKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVI 351
           PKFTIPHSAK++EVVLANGF+GSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVI
Sbjct: 300 PKFTIPHSAKVDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVI 359

Query: 352 HGRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
           HGRHYSA+YILGS QVFAGFVI N+SDRL+K LGL
Sbjct: 360 HGRHYSAVYILGSVQVFAGFVIANLSDRLTKMLGL 394

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356507620|ref|XP_003522562.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Glycine max]

 Score =  636 bits (1640), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 316/394 (80%), Positives = 350/394 (88%), Gaps = 10/394 (2%)

Query: 1   MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
           MGWRY AGLFLI  VVIIWVTSAEVTQDIF+DYKQPFAVTYLGASLMVVYLP+AF+KDWF
Sbjct: 1   MGWRYNAGLFLIVTVVIIWVTSAEVTQDIFTDYKQPFAVTYLGASLMVVYLPIAFIKDWF 60

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMR----HRVFEMELQGTFNKKDSELDLSSSEE 116
           CNLLK RSSKS K+AE ++E S  ++SP++    H+ FE+EL G+ N+KDS+LDLS+  E
Sbjct: 61  CNLLKSRSSKSGKNAECVDEFSVRISSPLKSNGVHKNFELEL-GSVNRKDSDLDLSTLAE 119

Query: 117 GMPLVSKLKDDA----HKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSS 172
             PLV+K  D+      ++ T +E+A  GFYIAPIWF+TEY SNAALARTSVASTTVLSS
Sbjct: 120 VKPLVAKYNDNTVLKVERQLTGKEVAAYGFYIAPIWFITEYLSNAALARTSVASTTVLSS 179

Query: 173 TSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVG 232
           TSGLFTLFIGAFMGQD+LNVAKVVAVLVSMAGV MTTLGKTWAADESQ S A GK SLVG
Sbjct: 180 TSGLFTLFIGAFMGQDSLNVAKVVAVLVSMAGVVMTTLGKTWAADESQLSDA-GKHSLVG 238

Query: 233 DLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEP 292
           DLFG+LSAMSYGLFTVLLKKF GEEGE++DVQKLFGYIGLFTLVALWWL+WPL ALGIEP
Sbjct: 239 DLFGILSAMSYGLFTVLLKKFSGEEGERVDVQKLFGYIGLFTLVALWWLIWPLMALGIEP 298

Query: 293 KFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIH 352
           KFTIPHSAK++EVVLANGF+GSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIH
Sbjct: 299 KFTIPHSAKVDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIH 358

Query: 353 GRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
           GRHYSA+YILGS QVFAGFVI N+SDRL+K L L
Sbjct: 359 GRHYSAVYILGSVQVFAGFVIANLSDRLTKMLRL 392

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388497358|gb|AFK36745.1| unknown [Lotus japonicus]

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 304/394 (77%), Positives = 345/394 (87%), Gaps = 9/394 (2%)

Query: 1   MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
           MGWRYRAGLFLI+ VVIIWV+SAEVTQDIF DYKQPFAVTYLGASLMVVYLP+AF+KDW 
Sbjct: 1   MGWRYRAGLFLIATVVIIWVSSAEVTQDIFVDYKQPFAVTYLGASLMVVYLPIAFIKDWL 60

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMR----HRVFEMELQGTFNKKDSELDLSSSEE 116
           CNLLK RSSKS K+AE+ +E S  + SP +     R FE+EL G   +KDS+LDLS+  E
Sbjct: 61  CNLLKHRSSKSGKNAESGDEFSVRIGSPFKGNEAQRSFEVEL-GNIIRKDSDLDLSTLSE 119

Query: 117 GMPLVSKLKD----DAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSS 172
             PLV +  D       K  T +EIAT GFYIAPIWF+TEY SNAALARTSVASTTVLSS
Sbjct: 120 VKPLVVRYNDTNLPKEEKALTAKEIATYGFYIAPIWFITEYLSNAALARTSVASTTVLSS 179

Query: 173 TSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVG 232
           TSGLFTLFIG  MGQD+L+++KVVAV VSM GVAMTT+GKTWAAD+S+FS++NG+RSLVG
Sbjct: 180 TSGLFTLFIGVLMGQDSLSMSKVVAVFVSMVGVAMTTMGKTWAADDSKFSSSNGQRSLVG 239

Query: 233 DLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEP 292
           DLFGLLSA+SYGLFTVLLKKF GEEGE++DVQKLFGY+GLFTLVALWWL+WPL+ALGIEP
Sbjct: 240 DLFGLLSAVSYGLFTVLLKKFSGEEGERVDVQKLFGYVGLFTLVALWWLIWPLSALGIEP 299

Query: 293 KFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIH 352
           KFTIPHS +++EVVLANGF+GSVLSDYFWALCVVWTTPLVATLGMSLTIPLAM+ADMVIH
Sbjct: 300 KFTIPHSTRVDEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMLADMVIH 359

Query: 353 GRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
           GRHYSA+YILGS QVFAGFVI N+SD ++KKLGL
Sbjct: 360 GRHYSALYILGSVQVFAGFVIANISDWMTKKLGL 393

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297798744|ref|XP_002867256.1| hypothetical protein ARALYDRAFT_491520 [Arabidopsis lyrata subsp. lyrata] gi|297313092|gb|EFH43515.1| hypothetical protein ARALYDRAFT_491520 [Arabidopsis lyrata subsp. lyrata]

 Score =  617 bits (1592), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 310/393 (78%), Positives = 340/393 (86%), Gaps = 9/393 (2%)

Query: 1   MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
           MGWRY+AGLFLI  VVIIWVTSAEVTQDIF+ YKQPFAVTYLGASLM+VYLPVAFLKDW 
Sbjct: 1   MGWRYKAGLFLIGTVVIIWVTSAEVTQDIFTAYKQPFAVTYLGASLMIVYLPVAFLKDWL 60

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEG-MP 119
           C  L RRSSKS K     +E+S  + SP++H++ EM LQGT  KKDSE  LSS EE   P
Sbjct: 61  CRYLDRRSSKSSKVPALTDESS--VGSPLKHKIIEMGLQGTITKKDSEEHLSSHEEDERP 118

Query: 120 LVSKLKDDAH-----KEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTS 174
           L+ K++++       KE TT++IA  G Y+APIWFVTEY SNAALARTSVASTTVLSSTS
Sbjct: 119 LIGKVREEVQTLKQRKEITTKQIAMYGLYLAPIWFVTEYLSNAALARTSVASTTVLSSTS 178

Query: 175 GLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQF-SAANGKRSLVGD 233
           GLFTLFIG F+GQDTLN++KVVAV VSMAGV MTTLGKTWAADESQ  S+ NG+RSL+GD
Sbjct: 179 GLFTLFIGVFLGQDTLNLSKVVAVFVSMAGVVMTTLGKTWAADESQLNSSLNGERSLMGD 238

Query: 234 LFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK 293
           LFGLLSA+SYGLFTVLLKKF GEEGE +DVQKLFGYIGLFTLVALWWLVWPLTALGIEPK
Sbjct: 239 LFGLLSAVSYGLFTVLLKKFAGEEGEGVDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK 298

Query: 294 FTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHG 353
           FTIPHS K++EVVLANGFVGSVLSDYFWAL VVWTTPLVATLGMSLTIPLAMVADM+IHG
Sbjct: 299 FTIPHSVKVDEVVLANGFVGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMVADMMIHG 358

Query: 354 RHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
           RHYSAIYILGS QVFAGFVI N+SD  SKKLGL
Sbjct: 359 RHYSAIYILGSTQVFAGFVIANISDLFSKKLGL 391

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437164|ref|XP_004136362.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Cucumis sativus]

 Score =  617 bits (1591), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 303/391 (77%), Positives = 339/391 (86%), Gaps = 6/391 (1%)

Query: 1   MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
           MGWRY+AGLFLI  VVIIWVTSAEVTQDIF+ YKQPFA+TYLGASLMVVYLP+AFLKDWF
Sbjct: 1   MGWRYKAGLFLIVTVVIIWVTSAEVTQDIFTAYKQPFAITYLGASLMVVYLPIAFLKDWF 60

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPL 120
           CNL+KR SSKS K+AE+ +ET  AL         ++ELQG F +KDS+ D S+  E  PL
Sbjct: 61  CNLVKRHSSKSGKNAESFSET-CALKQSGGETSLDVELQGNFTRKDSDADFSTHAEESPL 119

Query: 121 VSKLKDDAH-----KEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSG 175
           VS+ KDD +     KE T REIAT GFYIAPIWFVTEY SNAALARTSVASTTVLSSTSG
Sbjct: 120 VSRNKDDPYILKQEKELTNREIATYGFYIAPIWFVTEYLSNAALARTSVASTTVLSSTSG 179

Query: 176 LFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLF 235
           LFTLFIGA +GQD+LN+ KVVAV VSMAGV MTTLGKTWA+DESQ +A++ + SL+GDLF
Sbjct: 180 LFTLFIGAALGQDSLNMVKVVAVFVSMAGVVMTTLGKTWASDESQLTASDNEHSLIGDLF 239

Query: 236 GLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFT 295
           GLLSA+SYGLFTVLLKKF GEEGE++DVQKLFGYIGLFTL+ LWWLVWPLTALGIEPKF+
Sbjct: 240 GLLSAVSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLITLWWLVWPLTALGIEPKFS 299

Query: 296 IPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRH 355
           IPHS + EEVVLANGF+GSVLSDYFWALCVVWTTPLVATLGMSLTIPLAM+ADM +HGRH
Sbjct: 300 IPHSLRTEEVVLANGFIGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMLADMFLHGRH 359

Query: 356 YSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
           YSA+Y+LGS QVFAGFVI N+SD  SKKLGL
Sbjct: 360 YSAVYMLGSTQVFAGFVIANLSDWFSKKLGL 390

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449517195|ref|XP_004165631.1| PREDICTED: uncharacterized vacuolar membrane protein YML018C-like [Cucumis sativus]

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 301/391 (76%), Positives = 338/391 (86%), Gaps = 6/391 (1%)

Query: 1   MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
           MGWRY+AGLFLI  VVIIWVTSAEVTQDIF+ YKQPFA+TYLGASLMVVYLP+AFLKDWF
Sbjct: 1   MGWRYKAGLFLIVTVVIIWVTSAEVTQDIFTAYKQPFAITYLGASLMVVYLPIAFLKDWF 60

Query: 61  CNLLKRRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPL 120
           CNL+KR SSKS K+AE+ +ET  AL         ++ELQG F +KDS+ D S+  E  PL
Sbjct: 61  CNLVKRHSSKSGKNAESFSET-CALKQSGGETSLDVELQGNFTRKDSDADFSTHAEESPL 119

Query: 121 VSKLKDDAH-----KEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSG 175
           VS+ KDD +     KE T REIAT GFYIAPIWFVTEY SNAALARTSVASTTVLSSTSG
Sbjct: 120 VSRNKDDPYILKQEKELTNREIATYGFYIAPIWFVTEYLSNAALARTSVASTTVLSSTSG 179

Query: 176 LFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLF 235
           LFTLFIGA +GQD+LN+ KVVAV VSMAGV MTTLGKTWA+DESQ +A++ + SL+GDLF
Sbjct: 180 LFTLFIGAALGQDSLNMVKVVAVFVSMAGVVMTTLGKTWASDESQLTASDNEHSLIGDLF 239

Query: 236 GLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFT 295
           GLLSA+SYGLFTVLLKKF GEEGE++DVQKLFGYIGLFTL+ LWWLVWPLTALGIEPKF+
Sbjct: 240 GLLSAVSYGLFTVLLKKFAGEEGERVDVQKLFGYIGLFTLITLWWLVWPLTALGIEPKFS 299

Query: 296 IPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRH 355
           IPHS + EEVVLANGF+G VLSDYFWALCVVWTTPLVATLGMSLTIPLAM+ADM +HGRH
Sbjct: 300 IPHSLRTEEVVLANGFIGGVLSDYFWALCVVWTTPLVATLGMSLTIPLAMLADMFLHGRH 359

Query: 356 YSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
           YSA+Y+LGS QVFAGFVI N+SD  S+KLGL
Sbjct: 360 YSAVYMLGSTQVFAGFVIANLSDWFSRKLGL 390

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	386
TAIR|locus:2116657	394	AT4G32140 "AT4G32140" [Arabido	1.0	0.979	0.715	1.7e-146
SGD|S000004480	393	YML018C "Protein of unknown fu	0.722	0.709	0.280	2.5e-39
POMBASE|SPBC405.03c	341	SPBC405.03c "membrane transpor	0.603	0.683	0.307	5.7e-38
MGI|MGI:1921400	524	Slc35f5 "solute carrier family	0.601	0.442	0.287	5.5e-36
RGD|1308125	524	Slc35f5 "solute carrier family	0.601	0.442	0.287	5.5e-36
SGD|S000002846	370	THI74 "Mitochondrial transport	0.575	0.6	0.296	2.7e-34
CGD|CAL0005492	404	orf19.7427 [Candida albicans (	0.911	0.871	0.273	2.8e-34
UNIPROTKB|Q5A2Y4	404	CaO19.7427 "Putative uncharact	0.911	0.871	0.273	2.8e-34
UNIPROTKB|E2RAG9	524	SLC35F5 "Uncharacterized prote	0.601	0.442	0.287	3.3e-34
UNIPROTKB|F1RY25	524	SLC35F5 "Uncharacterized prote	0.601	0.442	0.287	3.3e-34

TAIR|locus:2116657 AT4G32140 "AT4G32140" [Arabidopsis thaliana (taxid:3702)]

 Score = 1431 (508.8 bits), Expect = 1.7e-146, P = 1.7e-146
 Identities = 282/394 (71%), Positives = 313/394 (79%)

Query:     1 MGWRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWF 60
             MGWRY+AGLFLI  VVIIWVTSAEVTQDIF+ YKQPFAVTYLGASLM+VYLPVAFLKDW 
Sbjct:     1 MGWRYKAGLFLIGTVVIIWVTSAEVTQDIFTAYKQPFAVTYLGASLMIVYLPVAFLKDWL 60

Query:    61 CNLLKRRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKXXXXXXXXXXXG--M 118
             C  L RRSSKS K     +++S  L SP+RH++ EM LQGT  KK               
Sbjct:    61 CRYLDRRSSKSNKIPALTDDSSVELGSPLRHKIIEMGLQGTITKKDSEEHLSSHEEEDER 120

Query:   119 PLVSKLKDDAH-----KEPTTREIATIGFYIAPIWFVTEYFSNAALARXXXXXXXXXXXX 173
             PL+ K++++       KE TT++IA  G Y+APIWFVTEY SNAALAR            
Sbjct:   121 PLIGKVREEVQTLKQRKEITTKQIAMYGLYLAPIWFVTEYLSNAALARTSVASTTVLSST 180

Query:   174 XXXXXXXIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQF-SAANGKRSLVG 232
                    IG F+GQDTLN++KVVAV VSMAGV MTTLGKTWA+DESQ  S+ NG+RSL+G
Sbjct:   181 SGLFTLFIGVFLGQDTLNLSKVVAVFVSMAGVVMTTLGKTWASDESQLNSSLNGERSLMG 240

Query:   233 DLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEP 292
             DLFGLLSA+SYGLFTVLLKKF GEEGE +DVQKLFGYIGLFTLVALWWLVWPLTALGIEP
Sbjct:   241 DLFGLLSAVSYGLFTVLLKKFAGEEGEGVDVQKLFGYIGLFTLVALWWLVWPLTALGIEP 300

Query:   293 KFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIH 352
             KFTIPHS K++EVVLANGF+GSVLSDYFWAL VVWTTPLVATLGMSLTIPLAMVADM+IH
Sbjct:   301 KFTIPHSVKVDEVVLANGFIGSVLSDYFWALSVVWTTPLVATLGMSLTIPLAMVADMMIH 360

Query:   353 GRHYSAIYILGSAQVFAGFVIVNVSDRLSKKLGL 386
             GRHYSAIYILGS QVFAGFVI N+SD  SKKLGL
Sbjct:   361 GRHYSAIYILGSTQVFAGFVIANISDLFSKKLGL 394

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

SGD|S000004480 YML018C "Protein of unknown function" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 338 (124.0 bits), Expect = 2.5e-39, Sum P(2) = 2.5e-39
 Identities = 83/296 (28%), Positives = 144/296 (48%)

Query:    91 HRVFEMELQGTFNKKXXXXXXXXXXXGMPLVSKLKDDAH----KEPTTREIATIGFYIAP 146
             HR   ME +GT +               PL++ L+   H    K  T  E   +      
Sbjct:    81 HRELIMEEEGTGSDSNRSVDMTS-----PLLTNLEAGTHANQKKRLTLYETIKLSAEFCI 135

Query:   147 IWFVTEYFSNAALARXXXXXXXXXXXXXXXXXXXIGAFMGQDTLNVAKVVAVLVSMAGVA 206
             +WF     +NA+LA                    IGA    ++L+ +KV+   +S  G+ 
Sbjct:   136 LWFTANLVTNASLAFTSVASQTILSTTSSFFTLFIGAICHVESLSKSKVLGSFISFVGII 195

Query:   207 MTTLGKTWAADESQFSAANGKRS-----LVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKI 261
             M T   +    +   +  +G  +     L+G+L  L  A+ YG+++ LLK+  G+E  ++
Sbjct:   196 MVTKSDSHQRYQRHIADVSGDDNDAVQVLIGNLLALAGAVLYGVYSTLLKREVGDE-TRV 254

Query:   262 DVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFW 321
             +++  FG++GLF L+ LW  +  L   G EP F++P   K+  ++  N  + + +SD+ W
Sbjct:   255 NMKIFFGFVGLFNLLFLWPSLIVLDFFGWEP-FSLPKDPKVVVIIFVNCLI-TFVSDFCW 312

Query:   322 ALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVS 377
             A  ++ T+PL  T+G+S+TIPLAM  D++   +  SA+Y+ G+  +   F I+N S
Sbjct:   313 AKAMLLTSPLTVTVGLSITIPLAMFGDVIFKHKTMSALYLFGATLILGSFFIINKS 368

GO:0000329 "fungal-type vacuole membrane" evidence=IDA

GO:0005774 "vacuolar membrane" evidence=IEA

GO:0005773 "vacuole" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=ISM;IEA

GO:0055085 "transmembrane transport" evidence=IEA

POMBASE|SPBC405.03c SPBC405.03c "membrane transporter (predicted)" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 340 (124.7 bits), Expect = 5.7e-38, Sum P(2) = 5.7e-38
 Identities = 74/241 (30%), Positives = 134/241 (55%)

Query:   139 TIGFYIAPIWFVTEYFSNAALARXXXXXXXXXXXXXXXXXXXIGAFMGQDTLNVAKVVAV 198
             ++GF I  IWF   YFSN++L                     +G  +  +   ++K++A+
Sbjct:   106 SLGFCI--IWFAANYFSNSSLGFTNVASFTIISSMSGFFTLGLGTIVNVERFTLSKLLAL 163

Query:   199 LVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEG 258
             + S+ GV +     T  A ++  + +   R  +G+ + LL+A+ YG ++V++K    EE 
Sbjct:   164 MASVGGVIIVV---TQDAKQADLNDSPPSRPALGNAYALLAALLYGCYSVMVKFHITEES 220

Query:   259 EKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSD 318
               +  +  FG +GLF L+ LW  +  L   G+E +F++P +     V++ N  + + +SD
Sbjct:   221 -CVSTRLFFGLVGLFDLILLWPFLIILHLYGVE-RFSLPSTTAGLIVLIINASI-TFVSD 277

Query:   319 YFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD 378
             Y W + ++ T+PL+ T+GMSL+IPLA+  D+++ G + +   ILGS  VFAGF++VN + 
Sbjct:   278 YLWVIAMLMTSPLLVTVGMSLSIPLALFFDILLKGHYLNFSLILGSLLVFAGFIVVNYNQ 337

Query:   379 R 379
             +
Sbjct:   338 Q 338

GO:0000139 "Golgi membrane" evidence=IEA

GO:0000329 "fungal-type vacuole membrane" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0022857 "transmembrane transporter activity" evidence=ISM

GO:0055085 "transmembrane transport" evidence=ISM

MGI|MGI:1921400 Slc35f5 "solute carrier family 35, member F5" [Mus musculus (taxid:10090)]

 Score = 290 (107.1 bits), Expect = 5.5e-36, Sum P(3) = 5.5e-36
 Identities = 71/247 (28%), Positives = 123/247 (49%)

Query:   133 TTREIATIGFYIAPIWFVTEYFSNAALARXXXXXXXXXXXXXXXXXXXIGAFMGQ---DT 189
             T  ++A I F+   +WF+       AL+                    + A       D 
Sbjct:   237 TATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDR 296

Query:   190 LNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVL 249
               ++K++AV++S+ GV +  L        S+ SA    R  +G ++ L  AM Y ++ V+
Sbjct:   297 FTLSKLLAVILSIGGVVLVNLSG------SEKSAG---RDTIGSIWSLAGAMFYAVYIVM 347

Query:   250 LKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLAN 309
             +K+    E +K+D+   FG++GLF L+ LW   + L   G E  F  P+   +  +++ N
Sbjct:   348 IKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPNKVVLLCIII-N 404

Query:   310 GFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFA 369
             G +G+VLS++ W      T+ L+ TL +SLTIPL+++ADM +    +S ++  G+  VF 
Sbjct:   405 GLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFF 464

Query:   370 GFVIVNV 376
              F IV +
Sbjct:   465 SFFIVTL 471

GO:0003674 "molecular_function" evidence=ND

GO:0005575 "cellular_component" evidence=ND

GO:0006810 "transport" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1308125 Slc35f5 "solute carrier family 35, member F5" [Rattus norvegicus (taxid:10116)]

 Score = 290 (107.1 bits), Expect = 5.5e-36, Sum P(3) = 5.5e-36
 Identities = 71/247 (28%), Positives = 123/247 (49%)

Query:   133 TTREIATIGFYIAPIWFVTEYFSNAALARXXXXXXXXXXXXXXXXXXXIGAFMGQ---DT 189
             T  ++A I F+   +WF+       AL+                    + A       D 
Sbjct:   237 TATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDR 296

Query:   190 LNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVL 249
               ++K++AV++S+ GV +  L        S+ SA    R  +G ++ L  AM Y ++ V+
Sbjct:   297 FTLSKLLAVILSIGGVVLVNLSG------SEKSAG---RDTIGSIWSLAGAMFYAVYIVM 347

Query:   250 LKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLAN 309
             +K+    E +K+D+   FG++GLF L+ LW   + L   G E  F  P+   +  +++ N
Sbjct:   348 IKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPNKVVLLCIII-N 404

Query:   310 GFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFA 369
             G +G+VLS++ W      T+ L+ TL +SLTIPL+++ADM +    +S ++  G+  VF 
Sbjct:   405 GLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFF 464

Query:   370 GFVIVNV 376
              F IV +
Sbjct:   465 SFFIVTL 471

GO:0016020 "membrane" evidence=IEA

SGD|S000002846 THI74 "Mitochondrial transporter repressible by thiamine" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 304 (112.1 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
 Identities = 68/229 (29%), Positives = 117/229 (51%)

Query:   147 IWFVTEYFSNAALARXXXXXXXXXXXXXXXXXXXIGAFMGQDTLNVAKVVAVLVSMAGVA 206
             +WFV    +NAAL+                    +   +G +T +  K++ + VS+ G+ 
Sbjct:   127 LWFVANLAANAALSYTTVASSTILSSTSSFFTLFLATSLGIETFSTKKLLGLFVSLFGII 186

Query:   207 MTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKL 266
             +  +  +   D    SA++    LVG+   LL ++ Y ++T LLK     +G ++D+Q  
Sbjct:   187 LIVMQSSKQQDS--VSASS---FLVGNTLALLGSLGYSVYTTLLKYEISSKGLRLDIQMF 241

Query:   267 FGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVV 326
              GY+G+FT +  W ++  L    +E  F +P +  +  +V+ N  +  V SDYFW   ++
Sbjct:   242 LGYVGIFTFLLFWPILIILDITHMET-FELPSNFHISFLVMLNCIIIFV-SDYFWCKALI 299

Query:   327 WTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVN 375
              T+PLV T+ ++ TIPLAM AD V     ++  YI+G   +F  F +VN
Sbjct:   300 LTSPLVVTVALTFTIPLAMFADFVWREAFFTPWYIIGVIFIFVSFFLVN 348

GO:0031966 "mitochondrial membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA;ISM

GO:0005739 "mitochondrion" evidence=IEA;IDA

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

CGD|CAL0005492 orf19.7427 [Candida albicans (taxid:5476)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 103/376 (27%), Positives = 184/376 (48%)

Query:     8 GLFLISAVVIIWVTSAEVTQDIFSD--YKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLK 65
             GL  ++AVVI WV+S+ +   +  D  Y++PF +TY+  S    YL + +L+      L+
Sbjct:    34 GLINLAAVVIFWVSSSFLVNAVVEDDTYRKPFFITYINTSCFCFYL-IPYLR------LE 86

Query:    66 RRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKXXXXXXXXXXXGMPLVSKLK 125
             + S +   D      T     S + H+  E +L   +  +            +   ++L 
Sbjct:    87 KLSVREFID----KFTQEYRYSKVSHKS-EQDLIQDYGSRDNLAVLEEQTLRVIDSNELA 141

Query:   126 D--DAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARXXXXXXXXXXXXXXXXXXXIGA 183
             +  D  ++    E A +      +WF     +NA+L+                    IG 
Sbjct:   142 EGGDEDQDINIYETAKLSLQFIVLWFSANLVTNASLSYTSVASQTILSSTSSFFTLIIGY 201

Query:   184 FMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSY 243
              +  + +N  K++ +L+S AGV + T  K  A +++  +  +    L G++  LL A+ Y
Sbjct:   202 LVSIEKINQNKILGILLSFAGVLIVT--KADATEDNPNTDNSALLILWGNILALLGALIY 259

Query:   244 GLFTVLLK-KFC--GEEGEK-IDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHS 299
             G++T+LLK K      + EK ++    FG++G+F LV LW ++  L    +E KF +P +
Sbjct:   260 GIYTILLKFKITIPHSKREKNLNTHLFFGFVGIFCLVFLWPMLVMLNYFRVE-KFELPPT 318

Query:   300 AKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAI 359
             + +  ++ AN  + + +SD+ W   V+ T+PL  T+G+S+TIPLAMV D V      + +
Sbjct:   319 SSVATIIAANAVI-TFVSDFCWCNAVLLTSPLTVTVGLSMTIPLAMVGDWVFKQFKLNLL 377

Query:   360 YILGSAQVFAGFVIVN 375
             Y+ G+  V  GF+I+N
Sbjct:   378 YVFGATIVTTGFLIIN 393

GO:0003674 "molecular_function" evidence=ND

GO:0000329 "fungal-type vacuole membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5A2Y4 CaO19.7427 "Putative uncharacterized protein" [Candida albicans SC5314 (taxid:237561)]

 Score = 372 (136.0 bits), Expect = 2.8e-34, P = 2.8e-34
 Identities = 103/376 (27%), Positives = 184/376 (48%)

Query:     8 GLFLISAVVIIWVTSAEVTQDIFSD--YKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLK 65
             GL  ++AVVI WV+S+ +   +  D  Y++PF +TY+  S    YL + +L+      L+
Sbjct:    34 GLINLAAVVIFWVSSSFLVNAVVEDDTYRKPFFITYINTSCFCFYL-IPYLR------LE 86

Query:    66 RRSSKSVKDAETLNETSAALNSPMRHRVFEMELQGTFNKKXXXXXXXXXXXGMPLVSKLK 125
             + S +   D      T     S + H+  E +L   +  +            +   ++L 
Sbjct:    87 KLSVREFID----KFTQEYRYSKVSHKS-EQDLIQDYGSRDNLAVLEEQTLRVIDSNELA 141

Query:   126 D--DAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARXXXXXXXXXXXXXXXXXXXIGA 183
             +  D  ++    E A +      +WF     +NA+L+                    IG 
Sbjct:   142 EGGDEDQDINIYETAKLSLQFIVLWFSANLVTNASLSYTSVASQTILSSTSSFFTLIIGY 201

Query:   184 FMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSY 243
              +  + +N  K++ +L+S AGV + T  K  A +++  +  +    L G++  LL A+ Y
Sbjct:   202 LVSIEKINQNKILGILLSFAGVLIVT--KADATEDNPNTDNSALLILWGNILALLGALIY 259

Query:   244 GLFTVLLK-KFC--GEEGEK-IDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHS 299
             G++T+LLK K      + EK ++    FG++G+F LV LW ++  L    +E KF +P +
Sbjct:   260 GIYTILLKFKITIPHSKREKNLNTHLFFGFVGIFCLVFLWPMLVMLNYFRVE-KFELPPT 318

Query:   300 AKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAI 359
             + +  ++ AN  + + +SD+ W   V+ T+PL  T+G+S+TIPLAMV D V      + +
Sbjct:   319 SSVATIIAANAVI-TFVSDFCWCNAVLLTSPLTVTVGLSMTIPLAMVGDWVFKQFKLNLL 377

Query:   360 YILGSAQVFAGFVIVN 375
             Y+ G+  V  GF+I+N
Sbjct:   378 YVFGATIVTTGFLIIN 393

GO:0003674 "molecular_function" evidence=ND

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|E2RAG9 SLC35F5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 294 (108.6 bits), Expect = 3.3e-34, Sum P(2) = 3.3e-34
 Identities = 71/247 (28%), Positives = 124/247 (50%)

Query:   133 TTREIATIGFYIAPIWFVTEYFSNAALARXXXXXXXXXXXXXXXXXXXIGAFMGQ---DT 189
             TT ++A I F+   +WF+       AL+                    + A       D 
Sbjct:   237 TTTQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDR 296

Query:   190 LNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVL 249
               ++K++AV++S+ GV +  L        S+ SA    R  +G ++ L+ AM Y ++ V+
Sbjct:   297 FTLSKLLAVILSIGGVVLVNLSG------SEKSAG---RDTIGSIWSLVGAMLYAVYIVM 347

Query:   250 LKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLAN 309
             +K+    E +K+D+   FG++GLF L+ LW   + L   G E  F  P+   +  +++ N
Sbjct:   348 IKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPNKVVLMCIII-N 404

Query:   310 GFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFA 369
             G +G+VLS++ W      T+ L+ TL +SLTIPL+++ADM +    +S ++  G+  VF 
Sbjct:   405 GLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIPVFF 464

Query:   370 GFVIVNV 376
              F I  +
Sbjct:   465 SFFIATL 471

GO:0016020 "membrane" evidence=IEA

UNIPROTKB|F1RY25 SLC35F5 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 294 (108.6 bits), Expect = 3.3e-34, Sum P(2) = 3.3e-34
 Identities = 71/247 (28%), Positives = 123/247 (49%)

Query:   133 TTREIATIGFYIAPIWFVTEYFSNAALARXXXXXXXXXXXXXXXXXXXIGAFMGQ---DT 189
             T  ++A I F+   +WF+       AL+                    + A       D 
Sbjct:   237 TATQVAKISFFFCFVWFLANLSYQEALSDTQVAIVNILSSTSGLFTLILAAVFPSNSGDR 296

Query:   190 LNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVL 249
               ++K++AV++S+ GV +  L        S+ SA    R  +G ++ L+ AM Y ++ V+
Sbjct:   297 FTLSKLLAVILSIGGVVLVNLSG------SEKSAG---RDTIGSIWSLVGAMLYAVYIVM 347

Query:   250 LKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLAN 309
             +K+    E +K+D+   FG++GLF L+ LW   + L   G E  F  P+   +   ++ N
Sbjct:   348 IKRKVDRE-DKLDIPMFFGFVGLFNLLLLWPGFFLLHYTGFED-FEFPNKVVLM-CIIVN 404

Query:   310 GFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFA 369
             G +G+VLS++ W      T+ L+ TL +SLTIPL+++ADM +    +S ++  G+  VF 
Sbjct:   405 GLIGTVLSEFLWLWGCFLTSSLIGTLALSLTIPLSIIADMCMQKVQFSWLFFAGAIHVFF 464

Query:   370 GFVIVNV 376
              F IV +
Sbjct:   465 SFFIVTL 471

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O94654	YGF3_SCHPO	No assigned EC number	0.3030	0.8134	0.9208	yes	no
Q03730	YMB8_YEAST	No assigned EC number	0.3144	0.8989	0.8829	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00032766001 SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (396 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	386
COG0697	292	COG0697, RhaT, Permeases of the drug/metabolite tr	1e-08
TIGR00950	260	TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Tran	5e-04

>gnl|CDD|223769 COG0697, RhaT, Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

 Score = 55.6 bits (134), Expect = 1e-08
 Identities = 47/228 (20%), Positives = 95/228 (41%), Gaps = 23/228 (10%)

Query: 153 YFSNAALARTSVASTTVLSSTSGLFTLFIGA-FMGQDTLNVAKVVAVLVSMAGVAMTTLG 211
                AL  TS +  +++     LFT  +    +  + L++ +++ +L+++AGV +  LG
Sbjct: 85  LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLG 144

Query: 212 KTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIG 271
                         G  SL+G L  L +A+ + L+T L+K+          +  +   + 
Sbjct: 145 ----------GGGGGILSLLGLLLALAAALLWALYTALVKRL-------SRLGPVTLALL 187

Query: 272 LFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPL 331
           L  L+AL  L+    +      F  P  ++   ++L  G   + L+   W   +      
Sbjct: 188 LQLLLALLLLLLFFLSG-----FGAPILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGAS 242

Query: 332 VATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR 379
           +  L   L    A +  +++ G   S   +LG+A V  G ++ ++  R
Sbjct: 243 LVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLRAR 290

Length = 292

>gnl|CDD|233205 TIGR00950, 2A78, Carboxylate/Amino Acid/Amine Transporter

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 47/226 (20%), Positives = 85/226 (37%), Gaps = 29/226 (12%)

Query: 149 FVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT 208
            V       A+ R  V    +L   + L+   +   MG++      ++A ++ +AG  + 
Sbjct: 58  GVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLL 117

Query: 209 TLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEG-EKIDVQKLF 267
                        S  N   +  G L GL S +S+ L TVL K+   +EG E +      
Sbjct: 118 ------------LSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWV 165

Query: 268 GYIG-LFTLVALWWL--VWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALC 324
             +G L  L   W+L       +L                 +L  G +G+ L+ + W   
Sbjct: 166 LLLGALLLLPFAWFLGPNPQALSLQW-------------GALLYLGLIGTALAYFLWNKG 212

Query: 325 VVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAG 370
           +    P  A++       +A++  ++I G   S   ++G A + A 
Sbjct: 213 LTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAA 258

[Transport and binding proteins, Amino acids, peptides and amines]. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	386
KOG2765	416	consensus Predicted membrane protein [Function unk	100.0
PLN00411	358	nodulin MtN21 family protein; Provisional	99.97
PRK11272	292	putative DMT superfamily transporter inner membran	99.96
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	99.96
PRK11689	295	aromatic amino acid exporter; Provisional	99.96
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	99.96
PRK15430	296	putative chloramphenical resistance permease RarD;	99.95
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	99.95
PRK10532	293	threonine and homoserine efflux system; Provisiona	99.95
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	99.93
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	99.91
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	99.91
COG0697	292	RhaT Permeases of the drug/metabolite transporter	99.89
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	99.89
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	99.86
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	99.85
KOG4510	346	consensus Permease of the drug/metabolite transpor	99.82
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	99.78
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	99.74
COG2962	293	RarD Predicted permeases [General function predict	99.7
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	99.61
KOG3912	372	consensus Predicted integral membrane protein [Gen	99.58
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	99.57
KOG2234	345	consensus Predicted UDP-galactose transporter [Car	99.56
KOG2766	336	consensus Predicted membrane protein [Function unk	99.5
KOG1580	337	consensus UDP-galactose transporter related protei	99.26
KOG1443	349	consensus Predicted integral membrane protein [Fun	99.25
COG2510	140	Predicted membrane protein [Function unknown]	99.16
KOG1581	327	consensus UDP-galactose transporter related protei	99.06
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	99.06
COG2510	140	Predicted membrane protein [Function unknown]	99.05
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	98.98
PF00892	126	EamA: EamA-like transporter family; InterPro: IPR0	98.98
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.96
PRK13499	345	rhamnose-proton symporter; Provisional	98.92
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	98.88
KOG1583	330	consensus UDP-N-acetylglucosamine transporter [Car	98.83
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.78
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	98.73
KOG1442	347	consensus GDP-fucose transporter [Carbohydrate tra	98.69
TIGR00950	260	2A78 Carboxylate/Amino Acid/Amine Transporter.	98.66
TIGR03340	281	phn_DUF6 phosphonate utilization associated putati	98.64
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.6
KOG1582	367	consensus UDP-galactose transporter related protei	98.58
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	98.57
PLN00411	358	nodulin MtN21 family protein; Provisional	98.5
PRK15430	296	putative chloramphenical resistance permease RarD;	98.45
KOG2922	335	consensus Uncharacterized conserved protein [Funct	98.39
COG5070	309	VRG4 Nucleotide-sugar transporter [Carbohydrate tr	98.39
PRK10532	293	threonine and homoserine efflux system; Provisiona	98.37
TIGR00688	256	rarD rarD protein. This uncharacterized protein is	98.35
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.34
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	98.33
PRK11689	295	aromatic amino acid exporter; Provisional	98.27
PRK11453	299	O-acetylserine/cysteine export protein; Provisiona	98.19
PRK11272	292	putative DMT superfamily transporter inner membran	98.18
PF03151	153	TPT: Triose-phosphate Transporter family; InterPro	98.13
PF13536	113	EmrE: Multidrug resistance efflux transporter	98.1
PRK15051	111	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	98.1
TIGR00817	302	tpt Tpt phosphate/phosphoenolpyruvate translocator	98.03
PTZ00343	350	triose or hexose phosphate/phosphate translocator;	97.94
PRK02971	129	4-amino-4-deoxy-L-arabinose-phosphoundecaprenol fl	97.77
COG2962	293	RarD Predicted permeases [General function predict	97.7
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.64
PF06027	334	DUF914: Eukaryotic protein of unknown function (DU	97.63
TIGR00776	290	RhaT RhaT L-rhamnose-proton symporter family prote	97.62
COG0697	292	RhaT Permeases of the drug/metabolite transporter	97.52
PRK09541	110	emrE multidrug efflux protein; Reviewed	97.46
COG2076	106	EmrE Membrane transporters of cations and cationic	97.35
PRK11431	105	multidrug efflux system protein; Provisional	97.26
PRK10650	109	multidrug efflux system protein MdtI; Provisional	97.09
PRK10452	120	multidrug efflux system protein MdtJ; Provisional	97.04
PRK09541	110	emrE multidrug efflux protein; Reviewed	96.89
PF05653	300	Mg_trans_NIPA: Magnesium transporter NIPA; InterPr	96.84
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	96.8
PRK13499	345	rhamnose-proton symporter; Provisional	96.73
PRK10650	109	multidrug efflux system protein MdtI; Provisional	96.7
PRK11431	105	multidrug efflux system protein; Provisional	96.7
COG2076	106	EmrE Membrane transporters of cations and cationic	96.67
PF08449	303	UAA: UAA transporter family; InterPro: IPR013657 T	96.66
COG5006	292	rhtA Threonine/homoserine efflux transporter [Amin	96.17
PF04142	244	Nuc_sug_transp: Nucleotide-sugar transporter; Inte	96.03
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	96.0
PF00893	93	Multi_Drug_Res: Small Multidrug Resistance protein	95.96
PF06800	269	Sugar_transport: Sugar transport protein; InterPro	95.54
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	95.5
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	95.39
KOG4510	346	consensus Permease of the drug/metabolite transpor	95.08
KOG2765	416	consensus Predicted membrane protein [Function unk	94.97
COG3238	150	Uncharacterized protein conserved in bacteria [Fun	94.7
PF06379	344	RhaT: L-rhamnose-proton symport protein (RhaT); In	93.96
COG4975	288	GlcU Putative glucose uptake permease [Carbohydrat	93.25
TIGR00803	222	nst UDP-galactose transporter. NSTs generally appe	92.81
KOG1441	316	consensus Glucose-6-phosphate/phosphate and phosph	92.07
PF04657	138	DUF606: Protein of unknown function, DUF606; Inter	91.84
PF10639	113	UPF0546: Uncharacterised protein family UPF0546; I	90.95
KOG4314	290	consensus Predicted carbohydrate/phosphate translo	90.86
KOG2922	335	consensus Uncharacterized conserved protein [Funct	87.9
KOG1580	337	consensus UDP-galactose transporter related protei	84.29
KOG1443	349	consensus Predicted integral membrane protein [Fun	82.63
KOG1444	314	consensus Nucleotide-sugar transporter VRG4/SQV-7	80.72

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=100.00  E-value=1.9e-51  Score=374.89  Aligned_cols=372  Identities=43%  Similarity=0.725  Sum_probs=290.6

Q ss_pred             chhhHHHHHHHHHHHHHHHhhHHHHHHHHhc--CCCcEEeeeecchhHHHHHHHHHHH--HHHHHHhhhccccccchhhh
Q 047775            2 GWRYRAGLFLISAVVIIWVTSAEVTQDIFSD--YKQPFAVTYLGASLMVVYLPVAFLK--DWFCNLLKRRSSKSVKDAET   77 (386)
Q Consensus         2 ~~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~--~~~P~~~~~~~~~~~~i~lp~~~~~--~~~~~~~~~~~~~~~~~~~~   77 (386)
                      .||+.+|+++++++.++|+++++++|.++++  |+|||++||++++.+++|+|.+.+.  +|+....|. .+......++
T Consensus         9 ~~r~~lGl~lL~~V~viWV~SSeLT~~if~~~~f~kPFfiTY~~ts~fivYL~~~~~~d~~~~~~~~R~-~~~~~~~~~e   87 (416)
T KOG2765|consen    9 RWRWTLGLVLLLLVVVIWVASSELTQSIFEDYNFRKPFFITYLKTSLFIVYLPPFILIDAPWRILETRS-KRSNHAIMEE   87 (416)
T ss_pred             hhHHHHHHHHHHHHHHHHHhHHHHHHHHHhhcccCCceeEeeecccceehhhhhhhhhcchhhhhhhhc-cccchhhhhh
Confidence            4899999999999999999999999999997  6699999999999999999854432  333323221 1111111111


Q ss_pred             hhccccc-cCCCccccchhhhhhccccccCCcccCCCcccCccccccc------------cccCCCCCCHHHHHHHHHHH
Q 047775           78 LNETSAA-LNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKL------------KDDAHKEPTTREIATIGFYI  144 (386)
Q Consensus        78 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~  144 (386)
                        ++..+ .+.+.+|.+-|.+.+....+++......+++++++..+..            .-+.+++++.++..+.++.+
T Consensus        88 --~d~e~y~~~~~~~~~~~~~l~~~~~~~~~~~~l~s~~~~~~~s~~~e~~~~~~~~~rs~l~~~~~~t~~~~ak~sl~f  165 (416)
T KOG2765|consen   88 --ADAEGYFSACTTDKTMESGLSGPESVPDKSPLLGSGEEEKPESTNLEVREKANTKKRSNLKERGKLTATQTAKLSLFF  165 (416)
T ss_pred             --hhhhccccccccccccccccCCceeeeccccccccccccCCCCccccccccCCcccccchhhhhhhHHHHHHHHHHHH
Confidence              11111 1122222222222222222222222222222211111100            01124456778999999999


Q ss_pred             HHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCccccccccc
Q 047775          145 APIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAA  224 (386)
Q Consensus       145 ~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~  224 (386)
                      |++||.+|++++.|+.||+++..+++.+++-+||.+++.++..||+++.|.+++++++.|++++...++...+     +.
T Consensus       166 c~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~-----~~  240 (416)
T KOG2765|consen  166 CPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNS-----DL  240 (416)
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccc-----cC
Confidence            9999999999999999999999999999999999999999999999999999999999999999988654322     12


Q ss_pred             CCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHH
Q 047775          225 NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEE  304 (386)
Q Consensus       225 ~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~  304 (386)
                      ..+....|+++++++|+.||+|.++.||...++++++++.+++|++|+++++++||+.++++..+.|. +++|.+.+ ..
T Consensus       241 ~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~-F~lP~~~q-~~  318 (416)
T KOG2765|consen  241 PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEER-FELPSSTQ-FS  318 (416)
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCc-ccCCCCce-eE
Confidence            45567899999999999999999999999987768999999999999999999999999999998776 88887654 55


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhhhc
Q 047775          305 VVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKK  383 (386)
Q Consensus       305 ~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~~~  383 (386)
                      .++.+++++++++.++|.+++-.++|..+++++++++|+|++.|+++.|.++++.+++|.+.|++|++++++.++..++
T Consensus       319 ~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~~~~  397 (416)
T KOG2765|consen  319 LVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSENSKK  397 (416)
T ss_pred             eeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccccccc
Confidence            6777788899999999999999999999999999999999999999999999999999999999999999987655443

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=99.97  E-value=1.5e-29  Score=242.22  Aligned_cols=306  Identities=13%  Similarity=0.090  Sum_probs=215.3

Q ss_pred             hhHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHH-HHHHHHHHHHHHHhhhccccccchhhhhhccc
Q 047775            4 RYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVY-LPVAFLKDWFCNLLKRRSSKSVKDAETLNETS   82 (386)
Q Consensus         4 ~~~~g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (386)
                      |..+.++.++++.+.+++...+.|..++++.+|+.++.+|+....++ +|+.+..        +|.+..           
T Consensus        10 ~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~--------~~~~~~-----------   70 (358)
T PLN00411         10 REAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFT--------NRSRSL-----------   70 (358)
T ss_pred             hccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHH--------HHhccc-----------
Confidence            44568889999999999999999999999999999999998886554 5554431        111100           


Q ss_pred             cccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Q 047775           83 AALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALART  162 (386)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~  162 (386)
                                                                     ++.+++++.+.++.+.+. +..+.+++.|++|+
T Consensus        71 -----------------------------------------------~~~~~~~~~~l~l~g~~g-~~~~~~~~~gl~~t  102 (358)
T PLN00411         71 -----------------------------------------------PPLSVSILSKIGLLGFLG-SMYVITGYIGIEYS  102 (358)
T ss_pred             -----------------------------------------------CcchHHHHHHHHHHHHHH-HHHHHHHHHHHhhc
Confidence                                                           001234444444433332 34566899999999


Q ss_pred             chhhHHHhhcccHHHHHHHHHHh------ccccchHHHHHHHHHhhhceEEEEecCCCCc-cc---------ccc--ccc
Q 047775          163 SVASTTVLSSTSGLFTLFIGAFM------GQDTLNVAKVVAVLVSMAGVAMTTLGKTWAA-DE---------SQF--SAA  224 (386)
Q Consensus       163 ~~~~~~~i~~~~p~~~~lls~~~------~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~-~~---------~~~--~~~  224 (386)
                      ++++++++.++.|+++.++++++      +|||+++++++|++++++|+.++...++... .+         ...  ...
T Consensus       103 sa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~~~~~~~~~~~~~~~  182 (358)
T PLN00411        103 NPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVASSPPYLNFRQLSPPLSS  182 (358)
T ss_pred             cHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccccccccccccccccccCC
Confidence            99999999999999999999999      6999999999999999999998775432110 00         000  001


Q ss_pred             CCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CceecCCChhHH
Q 047775          225 NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIE-PKFTIPHSAKME  303 (386)
Q Consensus       225 ~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e-~~~~~~~~~~~~  303 (386)
                      ...+...|+++.++++++||+|.++.|+..++++........   .++++.....++  .....+.+ ..+....+.. .
T Consensus       183 ~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~---~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~-~  256 (358)
T PLN00411        183 SNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFL---YTVCVSIVTSMI--GLVVEKNNPSVWIIHFDIT-L  256 (358)
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHH---HHHHHHHHHHHH--HHHHccCCcccceeccchH-H
Confidence            122345699999999999999999999987654332211111   112221111111  01111100 0012223333 3


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhhhc
Q 047775          304 EVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKK  383 (386)
Q Consensus       304 ~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~~~  383 (386)
                      ..++|.+++ +.++|.+|++++++.+|++++++.+++|+++++++++++||++++.+++|+++|+.|+++.+++++++.|
T Consensus       257 ~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~~~~~  335 (358)
T PLN00411        257 ITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKANEEK  335 (358)
T ss_pred             HHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence            457888876 6789999999999999999999999994449999999999999999999999999999999887666544

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=99.96  E-value=3.2e-27  Score=222.04  Aligned_cols=285  Identities=16%  Similarity=0.100  Sum_probs=206.8

Q ss_pred             CchhhHHHHH-HHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHH-HHHHHHHHHHHHHhhhccccccchhhhh
Q 047775            1 MGWRYRAGLF-LISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVY-LPVAFLKDWFCNLLKRRSSKSVKDAETL   78 (386)
Q Consensus         1 ~~~~~~~g~~-~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (386)
                      |..|..+.++ .++.+.++|+.+...+|...+ +.+|+.++..|.....+. +|+...        ++++..        
T Consensus         1 ~~~~~~~~~~~~~~~~~~iWg~~~~~~K~~~~-~~~p~~~~~~R~~~a~l~ll~~~~~--------~~~~~~--------   63 (292)
T PRK11272          1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVE-SWPPLMMAGVRFLIAGILLLAFLLL--------RGHPLP--------   63 (292)
T ss_pred             CchHHHHHHHHHHHHHHHHHhhHHHHHHHHhc-cCCHHHHHHHHHHHHHHHHHHHHHH--------hCCCCC--------
Confidence            5566666554 778889999998888887766 567999999998876554 443221        111000        


Q ss_pred             hccccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047775           79 NETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAA  158 (386)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  158 (386)
                                                                            +.++.......+...+...+.+++.+
T Consensus        64 ------------------------------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~   89 (292)
T PRK11272         64 ------------------------------------------------------TLRQWLNAALIGLLLLAVGNGMVTVA   89 (292)
T ss_pred             ------------------------------------------------------cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                                                                  01222222222222333466788899


Q ss_pred             h-cccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHH
Q 047775          159 L-ARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGL  237 (386)
Q Consensus       159 l-~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l  237 (386)
                      . ++++++.++++.++.|+++.+++++ +|||+++++++|++++++|+.++..+++.            +....|+++++
T Consensus        90 ~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~------------~~~~~G~l~~l  156 (292)
T PRK11272         90 EHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNL------------SGNPWGAILIL  156 (292)
T ss_pred             HHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCccc------------ccchHHHHHHH
Confidence            8 9999999999999999999999986 69999999999999999999887543211            12457999999


Q ss_pred             HHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHH
Q 047775          238 LSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLS  317 (386)
Q Consensus       238 ~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~  317 (386)
                      +++++||.|.+..||..++  ++..   ...+...++...+.+.   ...  .+.......+...|..+++.++++++++
T Consensus       157 ~a~~~~a~~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~i~~l~i~~s~~~  226 (292)
T PRK11272        157 IASASWAFGSVWSSRLPLP--VGMM---AGAAEMLAAGVVLLIA---SLL--SGERLTALPTLSGFLALGYLAVFGSIIA  226 (292)
T ss_pred             HHHHHHHHHHHHHHhcCCC--cchH---HHHHHHHHHHHHHHHH---HHH--cCCcccccCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999997542  2211   1112122222222221   111  1111222234567889999999999999


Q ss_pred             HHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775          318 DYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR  379 (386)
Q Consensus       318 ~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~  379 (386)
                      +.+|++++++.++..+++..+++|+++++++++++||++++.+++|+++|+.|+++.++.++
T Consensus       227 ~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~  288 (292)
T PRK11272        227 ISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKY  288 (292)
T ss_pred             HHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999555999999999999999999999999999999877544

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=99.96  E-value=3.4e-27  Score=222.58  Aligned_cols=283  Identities=16%  Similarity=0.193  Sum_probs=202.2

Q ss_pred             HHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhhhccccccCCCc
Q 047775           10 FLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAALNSPM   89 (386)
Q Consensus        10 ~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   89 (386)
                      ++.++++++|+.+...+|...++ .+|+.++.+|.....+.+.. +.        +++ +                    
T Consensus         7 l~~l~~~~~Wg~~~~~~k~~~~~-~~p~~~~~~R~~~a~~~l~~-~~--------~~~-~--------------------   55 (299)
T PRK11453          7 VLALLVVVVWGLNFVVIKVGLHN-MPPLMLAGLRFMLVAFPAIF-FV--------ARP-K--------------------   55 (299)
T ss_pred             HHHHHHHHHHhhhHHHHHHHHhc-CCHHHHHHHHHHHHHHHHHH-Hh--------cCC-C--------------------
Confidence            56888999999988888887766 67999999997764433211 11        111 0                    


Q ss_pred             cccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cchhhHH
Q 047775           90 RHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALAR-TSVASTT  168 (386)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~  168 (386)
                                                                ..++.....++..   .+....+++.+++| .++++++
T Consensus        56 ------------------------------------------~~~~~~~~~g~~~---~~~~~~~~~~~~~~~~~a~~a~   90 (299)
T PRK11453         56 ------------------------------------------VPLNLLLGYGLTI---SFGQFAFLFCAINFGMPAGLAS   90 (299)
T ss_pred             ------------------------------------------CchHHHHHHHHHH---HHHHHHHHHHHHHhcCCHHHHH
Confidence                                                      0122333333322   12233466789988 5889999


Q ss_pred             HhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHH
Q 047775          169 VLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTV  248 (386)
Q Consensus       169 ~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v  248 (386)
                      ++.++.|+++.+++++++|||+++++++|++++++|+.++..++..          ..+....|+++++.++++||+|.+
T Consensus        91 ~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~----------~~~~~~~G~~l~l~aal~~a~~~v  160 (299)
T PRK11453         91 LVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLN----------GQHVAMLGFMLTLAAAFSWACGNI  160 (299)
T ss_pred             HHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCC----------CcchhHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999988754321          111234799999999999999999


Q ss_pred             HHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---eecCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047775          249 LLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK---FTIPHSAKMEEVVLANGFVGSVLSDYFWALCV  325 (386)
Q Consensus       249 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~---~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~  325 (386)
                      +.||..++++... ......+..+++.+...   ......+.+..   ...+.+...|..++|.++++++++|.+|++++
T Consensus       161 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l  236 (299)
T PRK11453        161 FNKKIMSHSTRPA-VMSLVVWSALIPIIPFF---VASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLL  236 (299)
T ss_pred             HHHHHhcccCccc-hhHHHHHHHHHHHHHHH---HHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999865432222 11112222222222111   11111111100   00134566789999999999999999999999


Q ss_pred             HhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhhh
Q 047775          326 VWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSK  382 (386)
Q Consensus       326 ~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~~  382 (386)
                      ++.+|.+++...+++|.++++++++++||+++..+++|+++|+.|+++..++++.+|
T Consensus       237 ~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~~~~  293 (299)
T PRK11453        237 GRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLRWRK  293 (299)
T ss_pred             HhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchhhhc
Confidence            999999999999999444999999999999999999999999999999887766443

>PRK11689 aromatic amino acid exporter; Provisional

Probab=99.96  E-value=4.9e-27  Score=221.05  Aligned_cols=285  Identities=13%  Similarity=0.145  Sum_probs=198.8

Q ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhhhcccccc
Q 047775            6 RAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAAL   85 (386)
Q Consensus         6 ~~g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (386)
                      .++.++.+.+.++|+.+....|... +..+|+.+..+|.....+++.. +.        ++++.++              
T Consensus         3 ~~~~l~~l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~-~~--------~~~~~~~--------------   58 (295)
T PRK11689          3 QKATLIGLIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLL-TV--------GFPRLRQ--------------   58 (295)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHH-Hc--------ccccccc--------------
Confidence            4577889999999999666666544 4468999999997775554321 11        0110000              


Q ss_pred             CCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc----c
Q 047775           86 NSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALA----R  161 (386)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~----~  161 (386)
                                                                    ..++.. ..+   ++.....+.+++.|++    +
T Consensus        59 ----------------------------------------------~~~~~~-~~~---~l~~~~~~~~~~~a~~~~~~~   88 (295)
T PRK11689         59 ----------------------------------------------FPKRYL-LAG---GLLFVSYEICLALSLGYANTR   88 (295)
T ss_pred             ----------------------------------------------ccHHHH-HHH---hHHHHHHHHHHHHHHHHhhcc
Confidence                                                          011222 222   2223344556666665    4


Q ss_pred             cchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHH
Q 047775          162 TSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAM  241 (386)
Q Consensus       162 ~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~  241 (386)
                      +++++++++.++.|+++.+++++++|||+++++++|++++++|++++..++.....++ . ..+..+...|++++++|++
T Consensus        89 ~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~-~-~~~~~~~~~G~~~~l~aa~  166 (295)
T PRK11689         89 RQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAE-L-INNIASNPLSYGLAFIGAF  166 (295)
T ss_pred             ccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhh-h-hhccccChHHHHHHHHHHH
Confidence            6788899999999999999999999999999999999999999999886542110000 0 0011234569999999999


Q ss_pred             HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHHHHHH
Q 047775          242 SYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFW  321 (386)
Q Consensus       242 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~  321 (386)
                      +||.|.++.||..+++ ++...  .....+    ..+++.   .... .+  ...+.+...|..+++.++ +++++|.+|
T Consensus       167 ~~A~~~v~~k~~~~~~-~~~~~--~~~~~~----~~l~~~---~~~~-~~--~~~~~~~~~~~~l~~~~~-~t~~~~~l~  232 (295)
T PRK11689        167 IWAAYCNVTRKYARGK-NGITL--FFILTA----LALWIK---YFLS-PQ--PAMVFSLPAIIKLLLAAA-AMGFGYAAW  232 (295)
T ss_pred             HHHHHHHHHhhccCCC-CchhH--HHHHHH----HHHHHH---HHHh-cC--ccccCCHHHHHHHHHHHH-HHHHHHHHH
Confidence            9999999999987542 33221  111111    111111   1111 11  222345567877888885 699999999


Q ss_pred             HHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775          322 ALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL  380 (386)
Q Consensus       322 ~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~  380 (386)
                      ++++++.+|+.+++..+++|+++++++++++||+++..+++|+++|+.|+++....+|+
T Consensus       233 ~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~~  291 (295)
T PRK11689        233 NVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATRR  291 (295)
T ss_pred             HHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHhH
Confidence            99999999999999999995559999999999999999999999999999888765543

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=99.96  E-value=5.8e-27  Score=219.91  Aligned_cols=297  Identities=21%  Similarity=0.323  Sum_probs=224.6

Q ss_pred             hhhHHHHHHHHHHHHHHHhhHHHHHHHHhc-CCCcEEeeeecchhHHH-HHHHHHHHHHHHHHhhhccccccchhhhhhc
Q 047775            3 WRYRAGLFLISAVVIIWVTSAEVTQDIFSD-YKQPFAVTYLGASLMVV-YLPVAFLKDWFCNLLKRRSSKSVKDAETLNE   80 (386)
Q Consensus         3 ~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~-~~~P~~~~~~~~~~~~i-~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (386)
                      ||..+++++-=..+++-++.+..++++.++ .+.|.+.++++.....+ +-|...        +|++.++.         
T Consensus         9 ~~~~~~~~lgQ~lsl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~--------~r~~~~~~---------   71 (334)
T PF06027_consen    9 RRFWIVLLLGQVLSLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILL--------YRRGFKKW---------   71 (334)
T ss_pred             HHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhh--------hccccccc---------
Confidence            444556666666666777777777777775 78899999888666443 333222        12211100         


Q ss_pred             cccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 047775           81 TSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALA  160 (386)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~  160 (386)
                                            .                        .   ...++..+. ++.+++++.+|++...|++
T Consensus        72 ----------------------~------------------------~---~~~~~~w~y-~lla~~Dv~aN~~~v~a~~  101 (334)
T PF06027_consen   72 ----------------------L------------------------K---VLKRPWWKY-FLLALLDVEANYLVVLAYQ  101 (334)
T ss_pred             ----------------------h------------------------h---hcchhHHHH-HHHHHHHHHHHHHHHHHhh
Confidence                                  0                        0   011223333 3346689999999999999


Q ss_pred             ccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHH
Q 047775          161 RTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSA  240 (386)
Q Consensus       161 ~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa  240 (386)
                      ||+.+.++++.+++.++++++|++++|+|+++.+++|++++++|++++...|....+++    ...++..+||++++.||
T Consensus       102 yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~----~~~~~~i~GDll~l~~a  177 (334)
T PF06027_consen  102 YTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDS----SSGSNPILGDLLALLGA  177 (334)
T ss_pred             cccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccC----CCCCccchhHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999998775432211    13456789999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHHHHH
Q 047775          241 MSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYF  320 (386)
Q Consensus       241 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l  320 (386)
                      ++||+++++.|+..+++    +...++++.|+++.++..+.+..+...++|.   .+++.+.+..++..++ +..+-|.+
T Consensus       178 ~lya~~nV~~E~~v~~~----~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~---~~w~~~~~~~~v~~~~-~lf~~y~l  249 (334)
T PF06027_consen  178 ILYAVSNVLEEKLVKKA----PRVEFLGMLGLFGFIISGIQLAILERSGIES---IHWTSQVIGLLVGYAL-CLFLFYSL  249 (334)
T ss_pred             HHHHHHHHHHHHhcccC----CHHHHHHHHHHHHHHHHHHHHHheehhhhhc---cCCChhhHHHHHHHHH-HHHHHHHH
Confidence            99999999999998742    3467788889999988877765555555543   3445555544443333 56777888


Q ss_pred             HHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775          321 WALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD  378 (386)
Q Consensus       321 ~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~  378 (386)
                      ....++..+|+...+......|.++++|++++|+++++..++|.++|++|+++++..+
T Consensus       250 ~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~  307 (334)
T PF06027_consen  250 VPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAE  307 (334)
T ss_pred             HHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccC
Confidence            8999999999999998888877799999999999999999999999999999997654

Some of the sequences in this family are annotated as putative membrane proteins.

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=99.95  E-value=6.5e-26  Score=213.52  Aligned_cols=284  Identities=12%  Similarity=0.080  Sum_probs=196.2

Q ss_pred             hhhHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHH-HHHHHHHHHHHHHhhhccccccchhhhhhcc
Q 047775            3 WRYRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVY-LPVAFLKDWFCNLLKRRSSKSVKDAETLNET   81 (386)
Q Consensus         3 ~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~-lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (386)
                      +++.+|++++++..++|+.+...+|.. .+ .+|..++..|.....++ +++....        ++....          
T Consensus         4 ~~~~~g~~~~l~a~~~wg~~~~~~k~~-~~-~~~~~~~~~R~~~a~~~l~~~~~~~--------~~~~~~----------   63 (296)
T PRK15430          4 KQTRQGVLLALAAYFIWGIAPAYFKLI-YY-VPADEILTHRVIWSFFFMVVLMSIC--------RQWSYL----------   63 (296)
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHHHHHh-cC-CCHHHHHHHHHHHHHHHHHHHHHHH--------ccHHHH----------
Confidence            577789999999999999999888865 33 56999999997776553 3432221        110000          


Q ss_pred             ccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047775           82 SAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALAR  161 (386)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~  161 (386)
                                           .+                       .  ..++++... .+.+++.....+.++++|+++
T Consensus        64 ---------------------~~-----------------------~--~~~~~~~~~-~~~~~~~~~~~~~~~~~a~~~   96 (296)
T PRK15430         64 ---------------------KT-----------------------L--IQTPQKIFM-LAVSAVLIGGNWLLFIWAVNN   96 (296)
T ss_pred             ---------------------HH-----------------------H--HcCHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence                                 00                       0  001122222 223334455678899999999


Q ss_pred             cchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHH
Q 047775          162 TSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAM  241 (386)
Q Consensus       162 ~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~  241 (386)
                      +++++++++.++.|+++.+++++++|||+++++++|++++++|++++..+++             +.    ..+++++++
T Consensus        97 ~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------------~~----~~~~l~aa~  159 (296)
T PRK15430         97 HHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------------SL----PIIALGLAF  159 (296)
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------------Cc----cHHHHHHHH
Confidence            9999999999999999999999999999999999999999999998864321             01    256888999


Q ss_pred             HHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCCh-hHHHHHHHHHHHHHHHHHHH
Q 047775          242 SYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSA-KMEEVVLANGFVGSVLSDYF  320 (386)
Q Consensus       242 ~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~-~~~~~i~~~~i~~s~l~~~l  320 (386)
                      +||.|.+..||...+  +.........+...++.+..    .+....+.   .....++ ..+..+.+.++ .+.+++.+
T Consensus       160 ~~a~~~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~~~~g~-~t~i~~~~  229 (296)
T PRK15430        160 SFAFYGLVRKKIAVE--AQTGMLIETMWLLPVAAIYL----FAIADSST---SHMGQNPMSLNLLLIAAGI-VTTVPLLC  229 (296)
T ss_pred             HHHHHHHHHHhcCCC--CchhHHHHHHHHHHHHHHHH----HHHccCCc---ccccCCcHHHHHHHHHHHH-HHHHHHHH
Confidence            999999999987532  21221111112222222211    11111001   1111122 22333444555 58899999


Q ss_pred             HHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775          321 WALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL  380 (386)
Q Consensus       321 ~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~  380 (386)
                      |++++++.+|..+++..+++++++++++++++||++++.+++|+++|+.|+.+...+..+
T Consensus       230 ~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~  289 (296)
T PRK15430        230 FTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIY  289 (296)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999995559999999999999999999999999998777655433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=99.95  E-value=1.4e-25  Score=207.42  Aligned_cols=209  Identities=20%  Similarity=0.240  Sum_probs=164.8

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccc
Q 047775          142 FYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQF  221 (386)
Q Consensus       142 ~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~  221 (386)
                      +.+++.....+.+++.|++|+++++++++.++.|+++++++++++|||+++++++|++++++|+.++..+++        
T Consensus        51 ~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~--------  122 (260)
T TIGR00950        51 LLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN--------  122 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc--------
Confidence            333444556788999999999999999999999999999999999999999999999999999999875431        


Q ss_pred             cccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChh
Q 047775          222 SAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAK  301 (386)
Q Consensus       222 ~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~  301 (386)
                          .+....|++++++++++|+.+.++.||..++. ++.. .....+...++.+.+.|.   ...  .++ . .+.+..
T Consensus       123 ----~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~-~~~~-~~~~~~~~~~~~~~l~~~---~~~--~~~-~-~~~~~~  189 (260)
T TIGR00950       123 ----LSINPAGLLLGLGSGISFALGTVLYKRLVKKE-GPEL-LQFTGWVLLLGALLLLPF---AWF--LGP-N-PQALSL  189 (260)
T ss_pred             ----ccccHHHHHHHHHHHHHHHHHHHHHhHHhhcC-CchH-HHHHHHHHHHHHHHHHHH---HHh--cCC-C-CCcchH
Confidence                12346799999999999999999999987542 2211 112112222333333222   111  111 1 123456


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Q 047775          302 MEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGF  371 (386)
Q Consensus       302 ~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~  371 (386)
                      .|..+++.+++++.+++.+|++++++.++..++...+++++++++++++++||+++..+++|+++++.|+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       190 QWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            7778899999999999999999999999999999999995559999999999999999999999999986

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=99.95  E-value=7.9e-25  Score=205.81  Aligned_cols=279  Identities=14%  Similarity=0.073  Sum_probs=200.7

Q ss_pred             hHHHHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhhhccccc
Q 047775            5 YRAGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAA   84 (386)
Q Consensus         5 ~~~g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (386)
                      +.+|+++++++.++|+.++..+|+..++ .+|+.+...|.....+++.....        +++.+..             
T Consensus        10 ~~~~~~~~~la~~~~~~~~~~~K~~~~~-~~~~~~~~~R~~~a~l~l~~~~~--------~~~~~~~-------------   67 (293)
T PRK10532         10 VWLPILLLLIAMASIQSGASLAKSLFPL-VGAPGVTALRLALGTLILIAIFK--------PWRLRFA-------------   67 (293)
T ss_pred             cchHHHHHHHHHHHHHhhHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHh--------HHhccCC-------------
Confidence            3579999999999999999999999987 56888889998876654321111        1110000             


Q ss_pred             cCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccch
Q 047775           85 LNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSV  164 (386)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~  164 (386)
                                                                    ++.++.....++    +....+.++++|++|+++
T Consensus        68 ----------------------------------------------~~~~~~~~~~g~----~~~~~~~~~~~al~~~~~   97 (293)
T PRK10532         68 ----------------------------------------------KEQRLPLLFYGV----SLGGMNYLFYLSIQTVPL   97 (293)
T ss_pred             ----------------------------------------------HHHHHHHHHHHH----HHHHHHHHHHHHHhcccH
Confidence                                                          001233333333    334567889999999999


Q ss_pred             hhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHHHHH
Q 047775          165 ASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYG  244 (386)
Q Consensus       165 ~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a  244 (386)
                      +.++++.++.|+++.+++    +||+.+  ..++.++++|+.++...+..          ..+....|++++++++++||
T Consensus        98 ~~a~~l~~t~Pi~~~ll~----~~~~~~--~~~~~i~~~Gv~li~~~~~~----------~~~~~~~G~ll~l~aa~~~a  161 (293)
T PRK10532         98 GIAVALEFTGPLAVALFS----SRRPVD--FVWVVLAVLGLWFLLPLGQD----------VSHVDLTGAALALGAGACWA  161 (293)
T ss_pred             HHHHHHHHHHHHHHHHHh----cCChHH--HHHHHHHHHHHheeeecCCC----------cccCChHHHHHHHHHHHHHH
Confidence            999999999999999887    355554  45567889999988754321          11224579999999999999


Q ss_pred             HHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 047775          245 LFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALC  324 (386)
Q Consensus       245 ~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~  324 (386)
                      .|.+..||..+++ ++...    .+..+++...+.|.   ...  .+.  ..+.+...|..+++.|+++++++|.+|+++
T Consensus       162 ~~~v~~r~~~~~~-~~~~~----~~~~~~~~~~l~~~---~~~--~~~--~~~~~~~~~~~~l~lgv~~t~~~~~l~~~~  229 (293)
T PRK10532        162 IYILSGQRAGAEH-GPATV----AIGSLIAALIFVPI---GAL--QAG--EALWHWSILPLGLAVAILSTALPYSLEMIA  229 (293)
T ss_pred             HHHHHHHHHhccC-CchHH----HHHHHHHHHHHHHH---HHH--ccC--cccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999987542 22221    12223333333322   111  111  122344556677899999999999999999


Q ss_pred             HHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhhhc
Q 047775          325 VVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLSKK  383 (386)
Q Consensus       325 ~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~~~  383 (386)
                      +++.+|..++++.+++|+++++++++++||+++..+++|+++|+.|.+...+..+++.|
T Consensus       230 ~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~  288 (293)
T PRK10532        230 LTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPK  288 (293)
T ss_pred             HHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence            99999999999999995559999999999999999999999999999888766554433

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=99.93  E-value=7.1e-24  Score=200.35  Aligned_cols=218  Identities=17%  Similarity=0.232  Sum_probs=154.8

Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCC
Q 047775          148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGK  227 (386)
Q Consensus       148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~  227 (386)
                      ....+.+.++|++|++++.++++.++.|+++.+++++++|||++++++.|++++++|+++....+             .+
T Consensus        75 ~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~-------------~~  141 (302)
T TIGR00817        75 HTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTE-------------LS  141 (302)
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCc-------------cc
Confidence            34566788999999999999999999999999999999999999999999999999998754221             12


Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---e-ec--CCC-h
Q 047775          228 RSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK---F-TI--PHS-A  300 (386)
Q Consensus       228 ~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~---~-~~--~~~-~  300 (386)
                      ....|++++++|+++||+|.++.||..++  ++.+......+...++.+.+.|......  +.+..   + ..  ... .
T Consensus       142 ~~~~G~~~~l~a~~~~a~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~~~~--~~~~~~~~~~~~~~~~~~~  217 (302)
T TIGR00817       142 FNWAGFLSAMISNITFVSRNIFSKKAMTI--KSLDKTNLYAYISIMSLFLLSPPAFITE--GPPFLPHGFMQAISGVNVT  217 (302)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHhhcc--CCCCcccHHHHHHHHHHHHHHHHHHHHc--chHHHHHHHHHhhcccCch
Confidence            24569999999999999999999998752  1222223333333444444444322110  00000   0 00  001 1


Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775          301 KMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR  379 (386)
Q Consensus       301 ~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~  379 (386)
                      ..+...+..++.+..+.+.+++.++++++|+.+++..+++ |+ +++++++++||+++..+++|+++++.|++++++.++
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~-pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~  296 (302)
T TIGR00817       218 KIYTVSLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMK-RVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA  296 (302)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhh-hhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence            1122222233222233334566899999999999999999 65 999999999999999999999999999999987654


Q ss_pred             hhhc
Q 047775          380 LSKK  383 (386)
Q Consensus       380 ~~~~  383 (386)
                      +++|
T Consensus       297 ~~~~  300 (302)
T TIGR00817       297 QKPK  300 (302)
T ss_pred             cCcC
Confidence            4443

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=99.91  E-value=4.1e-22  Score=191.51  Aligned_cols=226  Identities=14%  Similarity=0.209  Sum_probs=165.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775          134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT  213 (386)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~  213 (386)
                      +++++..+++...    .+...+.|+++++++.++++.++.|+++++++++++|||++++++++++++++|+.+.+..+.
T Consensus       114 ~~~llp~gl~~~~----~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~  189 (350)
T PTZ00343        114 LKNFLPQGLCHLF----VHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKEL  189 (350)
T ss_pred             HHHHHHHHHHHHH----HHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccc
Confidence            4555555555432    344456999999999999999999999999999999999999999999999999999885321


Q ss_pred             CCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCC---cchHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047775          214 WAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGE---KIDVQKLFGYIGLFTLVALWWLVWPLTALGI  290 (386)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  290 (386)
                                   +....|++++++|++++|+|.++.||..++++.   ..+......++.+++.+++.|..........
T Consensus       190 -------------~~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~  256 (350)
T PTZ00343        190 -------------HFTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKW  256 (350)
T ss_pred             -------------hhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence                         224679999999999999999999998764321   2333334443344555554444221110000


Q ss_pred             CCce---ecCCChhHHHHHHHHHHHHHHHHHHHHHH----HHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHH
Q 047775          291 EPKF---TIPHSAKMEEVVLANGFVGSVLSDYFWAL----CVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILG  363 (386)
Q Consensus       291 e~~~---~~~~~~~~~~~i~~~~i~~s~l~~~l~~~----~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G  363 (386)
                      ...+   ..+.+...+..+++. ++.+.+++++|+.    ++++++|...++..++.++++++++++++||+++..+++|
T Consensus       257 ~~~~~~~~~~~~~~~~~~~l~~-i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG  335 (350)
T PTZ00343        257 VPVWTNYTANMTNYTKGIIIFK-IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLG  335 (350)
T ss_pred             HHHHHHhhhcccccchHHHHHH-HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHH
Confidence            0000   001111123334454 4558999999995    9999999999999999944599999999999999999999


Q ss_pred             HHHHHHHHHHHhcc
Q 047775          364 SAQVFAGFVIVNVS  377 (386)
Q Consensus       364 ~~lIi~g~~l~~~~  377 (386)
                      +++++.|++++++-
T Consensus       336 ~~lii~Gv~lYs~~  349 (350)
T PTZ00343        336 MAVAILGALLYSLF  349 (350)
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999999998763

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=99.91  E-value=6.1e-23  Score=191.96  Aligned_cols=212  Identities=13%  Similarity=0.023  Sum_probs=157.3

Q ss_pred             HHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccc
Q 047775          144 IAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSA  223 (386)
Q Consensus       144 ~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~  223 (386)
                      .+......+.+++.|++++++++++.+.++.|+++.+++++++|||+++++++|+.+++.|++++..++..         
T Consensus        69 ~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~---------  139 (281)
T TIGR03340        69 SAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA---------  139 (281)
T ss_pred             HHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc---------
Confidence            34445567788999999999999999999999999999999999999999999999999999988654321         


Q ss_pred             cCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHH
Q 047775          224 ANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKME  303 (386)
Q Consensus       224 ~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~  303 (386)
                         .....|+.++++++++|+.|.+..|+..++.++.........+..+...   .|........+..   ........+
T Consensus       140 ---~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~  210 (281)
T TIGR03340       140 ---QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMG---WPFLLLYLKRHGR---SMFPYARQI  210 (281)
T ss_pred             ---ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHH---HHHHHHHHHHhcc---chhhhHHHH
Confidence               1223588899999999999999988764321111111112211111110   1111111111111   111122345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Q 047775          304 EVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVI  373 (386)
Q Consensus       304 ~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l  373 (386)
                      ..+++.+.+++.++|.+|++++++.+++.++...+++++++++++++++||+++..+++|+++|+.|+++
T Consensus       211 ~~~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l  280 (281)
T TIGR03340       211 LPSATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV  280 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence            5677888888999999999999999999999999999555999999999999999999999999999876

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=99.89  E-value=1.1e-20  Score=176.93  Aligned_cols=212  Identities=21%  Similarity=0.274  Sum_probs=167.0

Q ss_pred             HHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHH-HhccccchHHHHHHHHHhhhceEEEEecCCCCccccccc
Q 047775          144 IAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGA-FMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFS  222 (386)
Q Consensus       144 ~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~-~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~  222 (386)
                      ........+.+++.++++++++.++.+.++.|+++.++++ ++++||++++++.++++++.|++++..++..+..     
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~-----  150 (292)
T COG0697          76 ALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI-----  150 (292)
T ss_pred             HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh-----
Confidence            3344556788999999999999999999999999999997 7779999999999999999999999987653210     


Q ss_pred             ccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhH
Q 047775          223 AANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKM  302 (386)
Q Consensus       223 ~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~  302 (386)
                          . ...|+.+++.+++++|++.+..|+.. + .+.......  +.........    .+...  .+  ...+.+...
T Consensus       151 ----~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~--~~~~~~~~~~----~~~~~--~~--~~~~~~~~~  213 (292)
T COG0697         151 ----L-SLLGLLLALAAALLWALYTALVKRLS-R-LGPVTLALL--LQLLLALLLL----LLFFL--SG--FGAPILSRA  213 (292)
T ss_pred             ----H-HHHHHHHHHHHHHHHHHHHHHHHHhc-C-CChHHHHHH--HHHHHHHHHH----HHHHh--cc--ccccCCHHH
Confidence                1 56899999999999999999999986 2 222222111  1111111110    11111  11  113455667


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcc
Q 047775          303 EEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVS  377 (386)
Q Consensus       303 ~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~  377 (386)
                      |..+.+.|++++.+++.+|++++++.++..++....++++++++++++++||.++..+++|+++++.|+.+.+++
T Consensus       214 ~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~  288 (292)
T COG0697         214 WLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR  288 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence            888999999988899999999999999999999998884458889999999999999999999999999999876

>TIGR00688 rarD rarD protein

Probab=99.89  E-value=1.6e-21  Score=179.91  Aligned_cols=253  Identities=8%  Similarity=0.030  Sum_probs=170.1

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHHH-HHHHHHHHHHHHhhhccccccchhhhhhcccccc
Q 047775            7 AGLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYL-PVAFLKDWFCNLLKRRSSKSVKDAETLNETSAAL   85 (386)
Q Consensus         7 ~g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~l-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (386)
                      +|++++++++++|+.+...+|.+ .+ .+|+.+++.|.....+++ +.....       ++++..+.             
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~-~~~~~i~~~R~~~a~~~l~~~~~~~-------~~~~~~~~-------------   59 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KP-LPATDILGHRMIWSFPFMLLSVTLF-------RQWAALIE-------------   59 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-cc-CCHHHHHHHHHHHHHHHHHHHHHHH-------cchHHHHH-------------
Confidence            48999999999999999999973 44 689999999988766554 322221       01000000             


Q ss_pred             CCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchh
Q 047775           86 NSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVA  165 (386)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~  165 (386)
                                     +..                           +...++........+++....+.++++|+++++++
T Consensus        60 ---------------~~~---------------------------~~~~~~~~~~~~~~g~~~~~~~~~~~~a~~~~~~~   97 (256)
T TIGR00688        60 ---------------RLK---------------------------RIQKRPLILSLLLCGLLIGFNWWLFIWAVNNGSSL   97 (256)
T ss_pred             ---------------HHh---------------------------CcccchHHHHHHHHHHHHHHHHHHHHHHHHcchHH
Confidence                           000                           00011212112223334556788999999999999


Q ss_pred             hHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHHHHHH
Q 047775          166 STTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGL  245 (386)
Q Consensus       166 ~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~  245 (386)
                      +++++.++.|+++.+++++++|||++++++++++++++|++++..+++           +  ..    .++++++++||.
T Consensus        98 ~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~-----------~--~~----~~~l~aa~~~a~  160 (256)
T TIGR00688        98 EVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG-----------S--LP----WEALVLAFSFTA  160 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-----------C--ch----HHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999988754321           0  11    367889999999


Q ss_pred             HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047775          246 FTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCV  325 (386)
Q Consensus       246 ~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~  325 (386)
                      |.+..||..++  +..  ....+  .....+...+.   ....+.+. .........|..+++.|++ +.++|.+|++++
T Consensus       161 ~~i~~~~~~~~--~~~--~~~~~--~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~l~~~g~~-t~i~~~l~~~a~  229 (256)
T TIGR00688       161 YGLIRKALKNT--DLA--GFCLE--TLSLMPVAIYY---LLQTDFAT-VQQTNPFPIWLLLVLAGLI-TGTPLLAFVIAA  229 (256)
T ss_pred             HHHHHhhcCCC--Ccc--hHHHH--HHHHHHHHHHH---HHHhccCc-ccccCchhHHHHHHHHHHH-HHHHHHHHHHHH
Confidence            99999997542  111  11111  11111111111   11111211 1111122368888888876 899999999999


Q ss_pred             HhhhhHHHHHHhhhhHHHHHHHHHHH
Q 047775          326 VWTTPLVATLGMSLTIPLAMVADMVI  351 (386)
Q Consensus       326 ~~~~~~~~s~~~~l~~p~a~i~~~i~  351 (386)
                      ++.+++.+++..+++|+++++++++.
T Consensus       230 ~~~~a~~~s~~~yl~Pv~~~~~~~~~  255 (256)
T TIGR00688       230 NRLPLNLLGLLQYIGPTIMMLCVSFL  255 (256)
T ss_pred             HcCChHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999944499988764

This uncharacterized protein is predicted to have many membrane-spanning domains.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=99.86  E-value=7e-22  Score=166.03  Aligned_cols=237  Identities=16%  Similarity=0.294  Sum_probs=201.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775          131 EPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL  210 (386)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~  210 (386)
                      ..+.|..++....+.++|..+||.|..|++..++++++.++.+...|+++++++.+++|+...|++++++++.|++++.+
T Consensus        46 G~nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay  125 (290)
T KOG4314|consen   46 GFNIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAY  125 (290)
T ss_pred             CceeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEe
Confidence            45566666666667778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 047775          211 GKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGI  290 (386)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  290 (386)
                      .|+.           ..+...|...++.+|...|+|.+..|+...+ ..-.+...++++.|.+.+.+.|.+...+.++|.
T Consensus       126 ~DN~-----------~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGn-An~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~V  193 (290)
T KOG4314|consen  126 ADNE-----------HADEIIGIACAVGSAFMAALYKVLFKMFIGN-ANFGDAAHFMSCLGFFNLCFISFPALILAFTGV  193 (290)
T ss_pred             ccch-----------hhhhhhhHHHHHHHHHHHHHHHHHHHHHhcc-CcchhHHHHHHHHHHHHHHHHhhhHHHHHHhch
Confidence            8763           3457899999999999999999999999874 334566888889999999888877777888888


Q ss_pred             CCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHH
Q 047775          291 EPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAG  370 (386)
Q Consensus       291 e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g  370 (386)
                      |. ++. ....-|..+...+.. +..-..+.+.++..+.|...|+++...+|..+..|.++.+-.++.....|.++|++|
T Consensus       194 E~-~qs-FA~~PWG~l~G~A~L-~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~  270 (290)
T KOG4314|consen  194 EH-LQS-FAAAPWGCLCGAAGL-SLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIG  270 (290)
T ss_pred             HH-HHH-HhhCCchhhhhHHHH-HHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            85 431 112236667666655 444556778899999999999999999999999999998889999999999999999


Q ss_pred             HHHHhccchhhh
Q 047775          371 FVIVNVSDRLSK  382 (386)
Q Consensus       371 ~~l~~~~~~~~~  382 (386)
                      +++...++.|.+
T Consensus       271 FiLiiiP~d~~e  282 (290)
T KOG4314|consen  271 FILIIIPEDKDE  282 (290)
T ss_pred             HHheecccchhh
Confidence            999988877654

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=99.85  E-value=2.3e-19  Score=168.09  Aligned_cols=220  Identities=14%  Similarity=0.185  Sum_probs=167.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhc-ccHHHHHHHHHHhccccchHHH----HHHHHHhhhceEEEE
Q 047775          135 REIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSS-TSGLFTLFIGAFMGQDTLNVAK----VVAVLVSMAGVAMTT  209 (386)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~lls~~~~~ek~~~~~----~~~v~l~~~Gv~lv~  209 (386)
                      ++.+..+++.+.+|..+|++|+.++++++++.+..+.+ +.++++.+++.+++|||.++++    ++|++++++|++++.
T Consensus        56 ~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~  135 (290)
T TIGR00776        56 LSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTS  135 (290)
T ss_pred             cHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEE
Confidence            47777888889999999999999999999999999988 8899999999999999999999    999999999999998


Q ss_pred             ecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHH--HHHHHHHHHHHHHHHHHHHHHHh
Q 047775          210 LGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQ--KLFGYIGLFTLVALWWLVWPLTA  287 (386)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~  287 (386)
                      ..++.+..++     ...+...|..++++|+++|+.|.+..|+..   .++.+..  +..+. .+.+.+.. +   +.  
T Consensus       136 ~~~~~~~~~~-----~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~~---~~~~~~~~~~~~g~-~~~~~~~~-~---~~--  200 (290)
T TIGR00776       136 RSKDKSAGIK-----SEFNFKKGILLLLMSTIGYLVYVVVAKAFG---VDGLSVLLPQAIGM-VIGGIIFN-L---GH--  200 (290)
T ss_pred             eccccccccc-----cccchhhHHHHHHHHHHHHHHHHHHHHHcC---CCcceehhHHHHHH-HHHHHHHH-H---HH--
Confidence            7642211000     002236799999999999999999999863   2333221  22211 11222211 1   11  


Q ss_pred             hcCCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHH----
Q 047775          288 LGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVV-WTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYI----  361 (386)
Q Consensus       288 ~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~-~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~----  361 (386)
                      . .++++   .+...+..++ .|++ ..+++.+|..+.+ +.+++.+++...++ |+ +++++++++||..+..++    
T Consensus       201 ~-~~~~~---~~~~~~~~~~-~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~-pvia~~~~v~~l~E~~~~~~~~~~~  273 (290)
T TIGR00776       201 I-LAKPL---KKYAILLNIL-PGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLG-VIISTLGGILILGEKKTKREMIAIS  273 (290)
T ss_pred             h-cccch---HHHHHHHHHH-HHHH-HHHHHHHHHHHcccccchhhHHHHHHHH-HHHHHHHHHHHhccCCCcceeehhH
Confidence            0 01101   1223344444 8888 7999999999999 99999999999999 66 999999999999999999    


Q ss_pred             HHHHHHHHHHHHHhc
Q 047775          362 LGSAQVFAGFVIVNV  376 (386)
Q Consensus       362 ~G~~lIi~g~~l~~~  376 (386)
                      +|+++|+.|+.+...
T Consensus       274 iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       274 VGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHhc
Confidence            999999999888654

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=99.82  E-value=4.1e-20  Score=162.33  Aligned_cols=216  Identities=14%  Similarity=0.173  Sum_probs=168.3

Q ss_pred             HHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCccccccccc-CCCc
Q 047775          150 VTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAA-NGKR  228 (386)
Q Consensus       150 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~-~~~~  228 (386)
                      .+....|+|++|.+.+++++|..++|++|.+++|+++|||+++.+.++.++++.||++++.+.-.-.++.+.+++ ..+.
T Consensus       109 tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~  188 (346)
T KOG4510|consen  109 TGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEY  188 (346)
T ss_pred             hHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccc
Confidence            345566899999999999999999999999999999999999999999999999999999665322111111111 2234


Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHH
Q 047775          229 SLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLA  308 (386)
Q Consensus       229 ~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~  308 (386)
                      ...|...++.+++.-|--.++.|+.-++.+..+++..+.    +++++...   +.....|   .+++|..++.|+.++.
T Consensus       189 ~~~gt~aai~s~lf~asvyIilR~iGk~~h~~msvsyf~----~i~lV~s~---I~~~~ig---~~~lP~cgkdr~l~~~  258 (346)
T KOG4510|consen  189 DIPGTVAAISSVLFGASVYIILRYIGKNAHAIMSVSYFS----LITLVVSL---IGCASIG---AVQLPHCGKDRWLFVN  258 (346)
T ss_pred             cCCchHHHHHhHhhhhhHHHHHHHhhccccEEEEehHHH----HHHHHHHH---HHHhhcc---ceecCccccceEEEEE
Confidence            456888888888888888888898866433333333332    22222211   1122222   2789999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775          309 NGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       309 ~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~  376 (386)
                      +|++ +.+++.+...++|+-.+..+++..+..+.+|.+++++++||.|+++.+.|+++|+.+.+.+..
T Consensus       259 lGvf-gfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~  325 (346)
T KOG4510|consen  259 LGVF-GFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVAL  325 (346)
T ss_pred             ehhh-hhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence            9997 799999999999999999999999999777999999999999999999999999999877654

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=99.78  E-value=1.1e-16  Score=151.21  Aligned_cols=239  Identities=22%  Similarity=0.302  Sum_probs=179.7

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775          133 TTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK  212 (386)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~  212 (386)
                      +.++....++    ++++++.+.+.|++|.+.+...++-++.|+++++++.+++|+|.++++++++++..+|+++....+
T Consensus        63 ~~~~~~~~~~----~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~  138 (303)
T PF08449_consen   63 PLKKYAILSF----LFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSD  138 (303)
T ss_pred             hHHHHHHHHH----HHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecc
Confidence            3556655543    455678888999999999999999999999999999999999999999999999999999999876


Q ss_pred             CCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 047775          213 TWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEP  292 (386)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~  292 (386)
                      ...+..+   .........|+++.+++.++.|.+.++.+|..++++  .+....+.+...++.+..++....+......+
T Consensus       139 ~~~~~~~---~~~~~~~~~G~~ll~~sl~~~a~~~~~qe~~~~~~~--~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~  213 (303)
T PF08449_consen  139 SSSSSSS---NSSSFSSALGIILLLLSLLLDAFTGVYQEKLFKKYG--KSPWELMFYTNLFSLPFLLILLFLLPTGEFRS  213 (303)
T ss_pred             ccccccc---ccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhC--CcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhH
Confidence            5432211   011222334999999999999999999999987543  23345555556666665544333211000110


Q ss_pred             cee-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHH
Q 047775          293 KFT-IPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGF  371 (386)
Q Consensus       293 ~~~-~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~  371 (386)
                      ..+ ....+..+..++...+ ++.++..+.+..+++.+|...++...+..+++++++++++|+++++.+++|.++++.|.
T Consensus       214 ~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~  292 (303)
T PF08449_consen  214 AIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGI  292 (303)
T ss_pred             HHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHH
Confidence            011 1122334555555655 47888888888999999999999999998889999999999999999999999999999


Q ss_pred             HHHhccchhh
Q 047775          372 VIVNVSDRLS  381 (386)
Q Consensus       372 ~l~~~~~~~~  381 (386)
                      .+.++.++|+
T Consensus       293 ~~~~~~~~k~  302 (303)
T PF08449_consen  293 FLYSYAKKKK  302 (303)
T ss_pred             HHHHHhhccC
Confidence            9998876654

; GO: 0055085 transmembrane transport

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=99.74  E-value=1.1e-15  Score=133.89  Aligned_cols=218  Identities=15%  Similarity=0.106  Sum_probs=159.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775          134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT  213 (386)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~  213 (386)
                      ++.+..++..    ....|.+||.+++..+.+.+..+-.+-|+.+.+++.    +|  .+..+.+.+++.|+.++.-.+.
T Consensus        71 ~~~~~~yGvs----Lg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s----Rr--~~d~vwvaLAvlGi~lL~p~~~  140 (292)
T COG5006          71 RLALLAYGVS----LGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS----RR--LRDFVWVALAVLGIWLLLPLGQ  140 (292)
T ss_pred             hHHHHHHHHH----HHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc----cc--hhhHHHHHHHHHHHHhheeccC
Confidence            3445555443    346899999999999999999999999999988763    33  3455667788888888775543


Q ss_pred             CCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047775          214 WAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK  293 (386)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~  293 (386)
                      .          ..+....|..+++.++.||+.|.+..||..+.++.....    .....+..++..|+    -....++ 
T Consensus       141 ~----------~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~~~g~~g~----a~gm~vAaviv~Pi----g~~~ag~-  201 (292)
T COG5006         141 S----------VWSLDPVGVALALGAGACWALYIVLGQRAGRAEHGTAGV----AVGMLVAALIVLPI----GAAQAGP-  201 (292)
T ss_pred             C----------cCcCCHHHHHHHHHHhHHHHHHHHHcchhcccCCCchHH----HHHHHHHHHHHhhh----hhhhcch-
Confidence            2          223457899999999999999999999987432222222    22222333332332    2111111 


Q ss_pred             eecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Q 047775          294 FTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVI  373 (386)
Q Consensus       294 ~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l  373 (386)
                       .+ .++.....-+..+++++.+.|.+=..++++.++..-++.+++|+.++++.+++++||.+|+.||+|.+.|+.+..-
T Consensus       202 -~l-~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG  279 (292)
T COG5006         202 -AL-FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAG  279 (292)
T ss_pred             -hh-cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhc
Confidence             11 2345566677789999999999999999999999999999999444999999999999999999999999999887


Q ss_pred             Hhccchhhh
Q 047775          374 VNVSDRLSK  382 (386)
Q Consensus       374 ~~~~~~~~~  382 (386)
                      .....|++.
T Consensus       280 ~~lt~~~~~  288 (292)
T COG5006         280 STLTARKPA  288 (292)
T ss_pred             cccccCCCC
Confidence            666555543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=99.70  E-value=7.8e-15  Score=131.94  Aligned_cols=205  Identities=16%  Similarity=0.157  Sum_probs=154.6

Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCC
Q 047775          147 IWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANG  226 (386)
Q Consensus       147 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~  226 (386)
                      +....-..|.+|.+...+-++++=++..|++..+++.+++|||+++.|+++++++.+||.......++            
T Consensus        81 li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~------------  148 (293)
T COG2962          81 LIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGS------------  148 (293)
T ss_pred             HHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCC------------
Confidence            34444558899999999999999999999999999999999999999999999999999887755321            


Q ss_pred             CcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHH-HHhhcCCCceecCCChhHHHH
Q 047775          227 KRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWP-LTALGIEPKFTIPHSAKMEEV  305 (386)
Q Consensus       227 ~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~e~~~~~~~~~~~~~~  305 (386)
                       -.    ..++.=|++|++|..+-|+..-      +...-+....+.    +.|++.. +.+...++++....+...+..
T Consensus       149 -lp----wval~la~sf~~Ygl~RK~~~v------~a~~g~~lE~l~----l~p~al~yl~~l~~~~~~~~~~~~~~~~L  213 (293)
T COG2962         149 -LP----WVALALALSFGLYGLLRKKLKV------DALTGLTLETLL----LLPVALIYLLFLADSGQFLQQNANSLWLL  213 (293)
T ss_pred             -Cc----HHHHHHHHHHHHHHHHHHhcCC------chHHhHHHHHHH----HhHHHHHHHHHHhcCchhhhcCCchHHHH
Confidence             11    2566678999999988777532      111112111111    1222221 122111111111134556788


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775          306 VLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR  379 (386)
Q Consensus       306 i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~  379 (386)
                      ++..|++ |.++..++..+-++.+-...+...+.+|.+-.+++++++||+++..+++..++|-.|+.+...+.-
T Consensus       214 Lv~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l  286 (293)
T COG2962         214 LVLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGL  286 (293)
T ss_pred             HHHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            8888986 899999999999999999999999999444999999999999999999999999999999887653

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=99.61  E-value=1.6e-13  Score=124.77  Aligned_cols=223  Identities=19%  Similarity=0.231  Sum_probs=160.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775          134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT  213 (386)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~  213 (386)
                      .|+.++.++... ++...|.+.+.++++.+++...++..+-.++|++++++++|+|++++||+++++-++|+.++...+.
T Consensus        14 ~~~~~~~~vPA~-lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~   92 (244)
T PF04142_consen   14 PKDTLKLAVPAL-LYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS   92 (244)
T ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence            467777766544 7889999999999999999999999999999999999999999999999999999999999987665


Q ss_pred             CCccccccc----ccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 047775          214 WAADESQFS----AANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALG  289 (386)
Q Consensus       214 ~~~~~~~~~----~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  289 (386)
                      ...+.++.+    +....+...|.++.++++++.++..++.+|..|+.+  .+........++++.++..+.   ....+
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~---~~~~~  167 (244)
T PF04142_consen   93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLA---LLLSD  167 (244)
T ss_pred             cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHH---Hhccc
Confidence            432111110    112345678999999999999999999999998643  333333323334444332221   11111


Q ss_pred             CCC----ceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHH
Q 047775          290 IEP----KFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSA  365 (386)
Q Consensus       290 ~e~----~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~  365 (386)
                      .++    .+--.++...|..++..+     ++=.+....+|+.+...=+....+.+.++.+++++++|.+++....+|+.
T Consensus       168 ~~~~~~~g~f~G~~~~~~~~i~~~a-----~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~  242 (244)
T PF04142_consen  168 GSAISESGFFHGYSWWVWIVIFLQA-----IGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAA  242 (244)
T ss_pred             ccccccCCchhhcchHHHHHHHHHH-----HhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhhee
Confidence            111    010122333444444333     33344566788899888888888997889999999999999999999987


Q ss_pred             HH
Q 047775          366 QV  367 (386)
Q Consensus       366 lI  367 (386)
                      +|
T Consensus       243 ~V  244 (244)
T PF04142_consen  243 LV  244 (244)
T ss_pred             cC
Confidence            64

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>KOG3912 consensus Predicted integral membrane protein [General function prediction only]

Probab=99.58  E-value=4.3e-13  Score=119.14  Aligned_cols=221  Identities=17%  Similarity=0.176  Sum_probs=163.2

Q ss_pred             HHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcc
Q 047775          150 VTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRS  229 (386)
Q Consensus       150 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~  229 (386)
                      .+..+.|.|+.+|+++.-.++-....+||.+++.-+++++++.++|+|+.....|++.+.+.|-....++   ....++.
T Consensus        98 ~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p---~~d~s~i  174 (372)
T KOG3912|consen   98 AGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDP---YTDYSSI  174 (372)
T ss_pred             hhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCC---ccccccc
Confidence            3455668999999999999999999999999999999999999999999999999999987754321111   1134567


Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCC--hhHHH---
Q 047775          230 LVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHS--AKMEE---  304 (386)
Q Consensus       230 ~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~--~~~~~---  304 (386)
                      ..||++.+++-+.-|++.+..+|..++  ..+++....++.|+++++.+....+|+.+......+.-.+.  ...|.   
T Consensus       175 itGdllIiiaqiivaiQ~v~Eek~l~~--~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD~~~~~  252 (372)
T KOG3912|consen  175 ITGDLLIIIAQIIVAIQMVCEEKQLKK--SNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLEDWGDAF  252 (372)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHhhhhh--ccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhhHHHHH
Confidence            889999999999999999999998875  45777888999999998877666666666422211111000  01111   


Q ss_pred             ------HHHHHHHHHHHHHHHHHH----HHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHH
Q 047775          305 ------VVLANGFVGSVLSDYFWA----LCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIV  374 (386)
Q Consensus       305 ------~i~~~~i~~s~l~~~l~~----~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~  374 (386)
                            ..++.+..+..++-.++|    .--+..+++.-.+.-.+..-+--+++.....|.++..|+.|.++.+.|+.++
T Consensus       253 ~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliLi~Gi~lY  332 (372)
T KOG3912|consen  253 AALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLILIMGIILY  332 (372)
T ss_pred             HHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  122223333333333333    2346677888888888885557778888889999999999999999999998


Q ss_pred             h
Q 047775          375 N  375 (386)
Q Consensus       375 ~  375 (386)
                      +
T Consensus       333 ~  333 (372)
T KOG3912|consen  333 N  333 (372)
T ss_pred             H
Confidence            6

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=99.57  E-value=2.4e-14  Score=133.25  Aligned_cols=228  Identities=19%  Similarity=0.267  Sum_probs=177.8

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775          133 TTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK  212 (386)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~  212 (386)
                      .++.++..++..+    ++..+-+.++.+.+++....+-++.|+++.++++++.+|+.++..+..++....||.+-+..+
T Consensus        82 ~~~~llpl~~~~~----~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e  157 (316)
T KOG1441|consen   82 PLRTLLPLGLVFC----ISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE  157 (316)
T ss_pred             chHHHHHHHHHHH----HHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc
Confidence            4566666665554    456666799999999999999999999999999999999999999999999999999988754


Q ss_pred             CCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH-HHHHHHHhhcCC
Q 047775          213 TWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALW-WLVWPLTALGIE  291 (386)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~e  291 (386)
                      .             +.+..|.+.++++.+..+++.++.|+..++++...+....+.+.+.++...+. |...+     .|
T Consensus       158 ~-------------~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~-----~~  219 (316)
T KOG1441|consen  158 L-------------SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDY-----VE  219 (316)
T ss_pred             c-------------cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhh-----hc
Confidence            2             34678999999999999999999999986445566767777777777777766 43222     22


Q ss_pred             Cc-e---ec-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHH
Q 047775          292 PK-F---TI-PHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQ  366 (386)
Q Consensus       292 ~~-~---~~-~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~l  366 (386)
                      +. .   .. +++.. ....+++. ++..+-+...+..+.+++|..-++...+---+.++.++++++++.++.+.+|+++
T Consensus       220 ~~~~~~~~~~~~~~~-~~~~~~~s-v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~i  297 (316)
T KOG1441|consen  220 GNKFVGFLTAPWFVT-FLILLLNS-VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAI  297 (316)
T ss_pred             ccceeeeeccccchh-hHHHHHHH-HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHH
Confidence            10 1   11 33333 33344444 3456666777888999999999999988844588999999999999999999999


Q ss_pred             HHHHHHHHhccchhhhcc
Q 047775          367 VFAGFVIVNVSDRLSKKL  384 (386)
Q Consensus       367 Ii~g~~l~~~~~~~~~~~  384 (386)
                      -+.|++++++.+.++++.
T Consensus       298 ai~Gv~~Y~~~k~~~~~~  315 (316)
T KOG1441|consen  298 AILGVFLYSRAKLKEKKG  315 (316)
T ss_pred             HHHHHHHHHHHhhhhhcc
Confidence            999999998876655543

>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]

Probab=99.56  E-value=7.9e-12  Score=115.77  Aligned_cols=233  Identities=17%  Similarity=0.191  Sum_probs=165.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCC
Q 047775          135 REIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTW  214 (386)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~  214 (386)
                      ++..+.++... +|.+.|.++|.++.+.++++..+...+-.+.|++++.+++++|++++||.++++.++|+.++-.+...
T Consensus        90 ~~~lk~~vPa~-iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~  168 (345)
T KOG2234|consen   90 RETLKVSVPAL-IYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLS  168 (345)
T ss_pred             HHHHHHHHHHH-HHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCC
Confidence            46666665543 78888999999999999999999999999999999999999999999999999999999999843322


Q ss_pred             CcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-
Q 047775          215 AADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK-  293 (386)
Q Consensus       215 ~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~-  293 (386)
                      ..++  .+....++...|....+.++...++..++.+|..++.+  .+.....-....++.++...   .....++|.. 
T Consensus       169 ~~~a--~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~--~s~wi~NiqL~~~g~~f~~l---~~~~~d~~~i~  241 (345)
T KOG2234|consen  169 PTGA--KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN--VSLWIRNIQLYFFGILFNLL---TILLQDGEAIN  241 (345)
T ss_pred             CCCc--cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHH---HHhhccccccc
Confidence            1111  11224567789999999999999999999999997533  33222211122233322111   1222233321 


Q ss_pred             ---eecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHH
Q 047775          294 ---FTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAG  370 (386)
Q Consensus       294 ---~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g  370 (386)
                         +-..++...|..++.+++.+-.+     ...+++.+-..=+...++.+.++.+.++.+++-++|....+|+.+|+.+
T Consensus       242 ~~gff~G~s~~vw~vVl~~a~gGLlv-----s~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~S  316 (345)
T KOG2234|consen  242 EYGFFYGYSSIVWLVVLLNAVGGLLV-----SLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILS  316 (345)
T ss_pred             cCCccccccHHHHHHHHHHhccchhH-----HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHH
Confidence               11234555677666666543333     3456666666666666677677888889999999999999999999999


Q ss_pred             HHHHhccchh
Q 047775          371 FVIVNVSDRL  380 (386)
Q Consensus       371 ~~l~~~~~~~  380 (386)
                      +.++...+++
T Consensus       317 i~lY~~~P~~  326 (345)
T KOG2234|consen  317 IFLYSLYPAR  326 (345)
T ss_pred             HHHhhcCCcc
Confidence            9999865544

>KOG2766 consensus Predicted membrane protein [Function unknown]

Probab=99.50  E-value=5.3e-15  Score=129.56  Aligned_cols=282  Identities=20%  Similarity=0.266  Sum_probs=194.6

Q ss_pred             hhhHHHHHHHHHHHHHHHhhHHHHHHHHhc-CCCcEEeeeecchhHH-HHHHHHHHHHHHHHHhhhccccccchhhhhhc
Q 047775            3 WRYRAGLFLISAVVIIWVTSAEVTQDIFSD-YKQPFAVTYLGASLMV-VYLPVAFLKDWFCNLLKRRSSKSVKDAETLNE   80 (386)
Q Consensus         3 ~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~-~~~P~~~~~~~~~~~~-i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (386)
                      ||..+|+.+-=...++=++.++..+++... -+.|-+.+|++..... ++-|+...        |++..+          
T Consensus        14 kk~li~~~LGQiLSL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~f--------R~~~~~----------   75 (336)
T KOG2766|consen   14 KKTLIGLGLGQILSLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLF--------RRKYIK----------   75 (336)
T ss_pred             hhhhheeeHHHHHHHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHh--------hhHHHH----------
Confidence            555566665555555666667777777775 6889999999877644 45554332        111000          


Q ss_pred             cccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 047775           81 TSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALA  160 (386)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~  160 (386)
                                                                         ..+++.    +++++.-.-+|++...|.|
T Consensus        76 ---------------------------------------------------~~~~hY----illa~~DVEaNy~vV~AyQ  100 (336)
T KOG2766|consen   76 ---------------------------------------------------AKWRHY----ILLAFVDVEANYFVVKAYQ  100 (336)
T ss_pred             ---------------------------------------------------HHHHHh----hheeEEeecccEEEeeehh
Confidence                                                               012232    3333334456777778999


Q ss_pred             ccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHH
Q 047775          161 RTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSA  240 (386)
Q Consensus       161 ~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa  240 (386)
                      ||+.+.+.++.+-....+.+++|+++|.|.++.|+.|+++|++|+++++..|....+.     ...++..+||.+++++|
T Consensus       101 yTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~-----aggsnp~~GD~lvi~GA  175 (336)
T KOG2766|consen  101 YTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDR-----AGGSNPVKGDFLVIAGA  175 (336)
T ss_pred             hcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccc-----cCCCCCccCcEEEEecc
Confidence            9999999999999999999999999999999999999999999999999887654332     24567789999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--eecCCChhHHHHHHHHHHHHHHHHH
Q 047775          241 MSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK--FTIPHSAKMEEVVLANGFVGSVLSD  318 (386)
Q Consensus       241 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~--~~~~~~~~~~~~i~~~~i~~s~l~~  318 (386)
                      -+||+.++..+.+.++    .+...++++.|+++.++..+.    .+  .|..  ..+.++......+.  ...+..+-|
T Consensus       176 TlYaVSNv~EEflvkn----~d~~elm~~lgLfGaIIsaIQ----~i--~~~~~~~tl~w~~~i~~yl~--f~L~MFllY  243 (336)
T KOG2766|consen  176 TLYAVSNVSEEFLVKN----ADRVELMGFLGLFGAIISAIQ----FI--FERHHVSTLHWDSAIFLYLR--FALTMFLLY  243 (336)
T ss_pred             eeeeeccccHHHHHhc----CcHHHHHHHHHHHHHHHHHHH----Hh--hhccceeeEeehHHHHHHHH--HHHHHHHHH
Confidence            9999999999988764    344667777788888764332    11  2221  12344433333322  222345555


Q ss_pred             HHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcc
Q 047775          319 YFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVS  377 (386)
Q Consensus       319 ~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~  377 (386)
                      .+.-..++..+++...+..... -+ +.+.  ..+|-+.++...+..+.+..|++++..+
T Consensus       244 sl~pil~k~~~aT~~nlslLTs-Dmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~r  300 (336)
T KOG2766|consen  244 SLAPILIKTNSATMFNLSLLTS-DMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTR  300 (336)
T ss_pred             HhhHHheecCCceEEEhhHhHH-HHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecc
Confidence            5656666777777766644444 55 6666  5567779999999999999999887543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.26  E-value=3e-11  Score=104.96  Aligned_cols=216  Identities=18%  Similarity=0.209  Sum_probs=162.6

Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCC
Q 047775          147 IWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANG  226 (386)
Q Consensus       147 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~  226 (386)
                      .+.++...-+.|++|.+-.+..+--++-|+-++++++++.+++.+|+|..++++.++||++..++++.....      ..
T Consensus        94 sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~------e~  167 (337)
T KOG1580|consen   94 SYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGA------ED  167 (337)
T ss_pred             HHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCC------cc
Confidence            455666777899999999999888999999999999999999999999999999999999999986432110      23


Q ss_pred             CcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcee----cCCChhH
Q 047775          227 KRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFT----IPHSAKM  302 (386)
Q Consensus       227 ~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~----~~~~~~~  302 (386)
                      .....|.++.+++-..-++-...+.+..+.+ .+....+++ ...+.+.+.+-.   .+.++| |- |+    ..-.+..
T Consensus       168 ~t~g~GElLL~lSL~mDGlTg~~Qdrira~y-q~~g~~MM~-~~NlwStL~Lg~---g~lfTG-El-weF~yF~~RhP~~  240 (337)
T KOG1580|consen  168 KTFGFGELLLILSLAMDGLTGSIQDRIRASY-QRTGTSMMF-YTNLWSTLYLGA---GLLFTG-EL-WEFFYFVQRHPYV  240 (337)
T ss_pred             cccchHHHHHHHHHHhcccchhHHHHHHHhh-ccCchhhHH-HHHHHHHHHhhh---hheehh-hH-HHHHHHHHhccHH
Confidence            4577899999999999999999888776542 222222222 223333322111   112221 21 21    1112346


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775          303 EEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       303 ~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~  376 (386)
                      |+-+...++ ++++++++.+.-+...+|...|+.....--++++.++++++++++.+||+|.++++.|...-..
T Consensus       241 ~~~l~l~ai-~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~  313 (337)
T KOG1580|consen  241 FWDLTLLAI-ASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV  313 (337)
T ss_pred             HHHHHHHHH-HHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence            667777777 5899999999999999999999988888666999999999999999999999999999766543

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=99.25  E-value=9.5e-10  Score=99.42  Aligned_cols=226  Identities=19%  Similarity=0.159  Sum_probs=146.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 047775          132 PTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLG  211 (386)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~  211 (386)
                      .+|++.++-....++.-...--+-+++++|++.+..++.-+++++|+.+++.+|.-||++|.-..-+++..+|+++.+++
T Consensus        78 ~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~K  157 (349)
T KOG1443|consen   78 LSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYK  157 (349)
T ss_pred             CcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEec
Confidence            34555554443333322223335579999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCC----CcchHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047775          212 KTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEG----EKIDVQKLFGYIGLFTLVALWWLVWPLTA  287 (386)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  287 (386)
                      +.             +-...|.+++.+++++-++--.+.++..++++    .+.++...+.  -.+. ..+.|.  .+.+
T Consensus       158 sT-------------qf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~--p~M~-~~Ll~~--~l~f  219 (349)
T KOG1443|consen  158 ST-------------QFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQ--PWMS-IGLLPL--SLLF  219 (349)
T ss_pred             cc-------------ceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhh--hHHH-HHHHHH--HHHH
Confidence            64             23567999999999988877777776665432    2232222111  1111 111121  1121


Q ss_pred             hcCCC-----ceecCCChhHHHHHHHHHHHHHHHHHHHHH---HHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHH
Q 047775          288 LGIEP-----KFTIPHSAKMEEVVLANGFVGSVLSDYFWA---LCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAI  359 (386)
Q Consensus       288 ~~~e~-----~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~---~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~  359 (386)
                      -|.+.     .+....+...+..+...+. ++.+++.+-.   ..+.+++....++....--....+++.++.+++++..
T Consensus       220 EG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~l  298 (349)
T KOG1443|consen  220 EGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLL  298 (349)
T ss_pred             cccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhh
Confidence            11111     1111112223434444433 2444444322   2345666667776655552338899999999999999


Q ss_pred             HHHHHHHHHHHHHHHhc
Q 047775          360 YILGSAQVFAGFVIVNV  376 (386)
Q Consensus       360 ~~~G~~lIi~g~~l~~~  376 (386)
                      .|+|..+...|+.+...
T Consensus       299 N~~Gl~i~~agi~~~~~  315 (349)
T KOG1443|consen  299 NWLGLAICLAGILLHRN  315 (349)
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            99999999999999843

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.16  E-value=3.2e-10  Score=89.47  Aligned_cols=134  Identities=16%  Similarity=0.156  Sum_probs=98.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecC--CChhHHHHHHHH
Q 047775          232 GDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIP--HSAKMEEVVLAN  309 (386)
Q Consensus       232 G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~--~~~~~~~~i~~~  309 (386)
                      -.++++++|+++++-.++.|--.++-++...+. .-..   .....++.   .....|   +++.+  .+++.|..++..
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~vdp~~At~-IRti---Vi~~~l~~---v~~~~g---~~~~~~~~~~k~~lflilS   73 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEGVDPDFATT-IRTI---VILIFLLI---VLLVTG---NWQAGGEIGPKSWLFLILS   73 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccccCccHHHH-HHHH---HHHHHHHH---HHHhcC---ceecccccCcceehhhhHH
Confidence            357899999999999999998766322222211 1111   11111111   122222   24433  466789999999


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775          310 GFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       310 ~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~  376 (386)
                      |+ ++.++..+|+++++...+..+.....+.+.++++++++++||+++..+++|+++|.+|.+++.+
T Consensus        74 Gl-a~glswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          74 GL-AGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             HH-HHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            96 6999999999999999999999999999555999999999999999999999999999887654

>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=99.06  E-value=2.4e-07  Score=84.12  Aligned_cols=230  Identities=14%  Similarity=0.138  Sum_probs=170.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775          133 TTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK  212 (386)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~  212 (386)
                      ++++...+++.-    .+...+.+.|++|.+=.+.++--++--+-+++.+.++.|+|.+..+-+..++.-.|+.+....+
T Consensus        82 pl~~y~~is~tn----~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~  157 (327)
T KOG1581|consen   82 PLYKYSLISFTN----TLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFP  157 (327)
T ss_pred             chhHHhHHHHHh----hcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEec
Confidence            345555444432    2466788999999999999999999999999999999999999999999999999999888765


Q ss_pred             CCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc--C
Q 047775          213 TWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALG--I  290 (386)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~  290 (386)
                      +.++..    .....+...|..+....-+.-+.-+..++++.++  ..++...++....++..+.-..   .+...|  .
T Consensus       158 ~s~s~~----~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~--~k~s~~~mM~~vNLf~~i~~~~---~li~qg~~~  228 (327)
T KOG1581|consen  158 NSDSSS----KSGRENSPIGILLLFGYLLFDGFTNATQDSLFKK--YKVSSLHMMFGVNLFSAILNGT---YLILQGHLL  228 (327)
T ss_pred             CCCCcc----ccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhcc--CCccHhHHHHHHHHHHHHHHHH---hhhcCCCCc
Confidence            443111    1133567899999999999999999999999874  3444444444445555543110   111111  1


Q ss_pred             CCcee-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHH
Q 047775          291 EPKFT-IPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFA  369 (386)
Q Consensus       291 e~~~~-~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~  369 (386)
                      +. .. ....+..+.-++.... ++.+++.+.++-+++-||..-+.++...--++++++.+.+|++.+..|++|..+++.
T Consensus       229 ~a-v~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg  306 (327)
T KOG1581|consen  229 PA-VSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFG  306 (327)
T ss_pred             hH-HHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehH
Confidence            10 01 1223455666666665 478999999999999999999999999967799999999999999999999999999


Q ss_pred             HHHHHhcc
Q 047775          370 GFVIVNVS  377 (386)
Q Consensus       370 g~~l~~~~  377 (386)
                      |+.+-...
T Consensus       307 ~i~l~~~~  314 (327)
T KOG1581|consen  307 GIFLEILL  314 (327)
T ss_pred             HHHHHHHH
Confidence            98876543

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=99.06  E-value=2.2e-09  Score=87.18  Aligned_cols=125  Identities=20%  Similarity=0.272  Sum_probs=91.3

Q ss_pred             HHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHHHHHHHHHH
Q 047775          241 MSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYF  320 (386)
Q Consensus       241 ~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l  320 (386)
                      ++||.+.+..|+..++    .+......+...++.+ +++.   ....+.++  ....+.+.+...++.+++++.+++.+
T Consensus         1 ~~~a~~~~~~k~~~~~----~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (126)
T PF00892_consen    1 FSWAIYSVFSKKLLKK----ISPLSITFWRFLIAGI-LLIL---LLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLL   70 (126)
T ss_pred             ceeeeHHHHHHHHhcc----CCHHHHHHHHHHHHHH-HHHH---HHhhcccc--ccCCChhhhhhhhHhhccceehHHHH
Confidence            4689999999998864    2222333332233332 1111   11111111  12344556777888888888999999


Q ss_pred             HHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh
Q 047775          321 WALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVN  375 (386)
Q Consensus       321 ~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~  375 (386)
                      +++++++.++..++....++++++.++++++++|+++..+++|+++++.|+++..
T Consensus        71 ~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   71 YFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             HHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999955599999999999999999999999999998865

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>COG2510 Predicted membrane protein [Function unknown]

Probab=99.05  E-value=2e-09  Score=85.10  Aligned_cols=136  Identities=10%  Similarity=0.104  Sum_probs=100.7

Q ss_pred             HHHHHHHHHHHHHhhHHHHHHHHhcCCCcEEeeeecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhhhccccccCC
Q 047775            8 GLFLISAVVIIWVTSAEVTQDIFSDYKQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNETSAALNS   87 (386)
Q Consensus         8 g~~~~l~~~~~w~~~~~~~~~~~~~~~~P~~~~~~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (386)
                      .+++.+++++.|+.....+|.-.++ .+|-+-+.+|+....+++......       ..+ .+..               
T Consensus         4 ~~~~ALLsA~fa~L~~iF~KIGl~~-vdp~~At~IRtiVi~~~l~~v~~~-------~g~-~~~~---------------   59 (140)
T COG2510           4 AIIYALLSALFAGLTPIFAKIGLEG-VDPDFATTIRTIVILIFLLIVLLV-------TGN-WQAG---------------   59 (140)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhccc-cCccHHHHHHHHHHHHHHHHHHHh-------cCc-eecc---------------
Confidence            4578899999999988888766665 458889999987766654332221       111 1100               


Q ss_pred             CccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhH
Q 047775           88 PMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALARTSVAST  167 (386)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~  167 (386)
                            .                                 +-.++++--+..-++.++    ...++||.|++..+++.+
T Consensus        60 ------~---------------------------------~~~~k~~lflilSGla~g----lswl~Yf~ALk~G~as~V   96 (140)
T COG2510          60 ------G---------------------------------EIGPKSWLFLILSGLAGG----LSWLLYFRALKKGKASRV   96 (140)
T ss_pred             ------c---------------------------------ccCcceehhhhHHHHHHH----HHHHHHHHHHhcCCcceE
Confidence                  0                                 001123444444454444    355789999999999999


Q ss_pred             HHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775          168 TVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL  210 (386)
Q Consensus       168 ~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~  210 (386)
                      .-+..++|+++.++|++++|||++..+++|+++..+|++++..
T Consensus        97 vPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~  139 (140)
T COG2510          97 VPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL  139 (140)
T ss_pred             EEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence            9999999999999999999999999999999999999999864

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=98.98  E-value=4.9e-08  Score=88.88  Aligned_cols=218  Identities=14%  Similarity=0.155  Sum_probs=155.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHH----HHHHHHhhhceEEEE
Q 047775          135 REIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAK----VVAVLVSMAGVAMTT  209 (386)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~----~~~v~l~~~Gv~lv~  209 (386)
                      ...+..+++.+++|...|..++.+.++..++++.-+. ...-+.+.++++++++|--+..+    .+|+++.++|+++.+
T Consensus        42 ~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts  121 (269)
T PF06800_consen   42 GTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTS  121 (269)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhc
Confidence            3677788899999999999999999999999999997 46677799999999999876544    448899999999998


Q ss_pred             ecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 047775          210 LGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALG  289 (386)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  289 (386)
                      ..+..+...+     +..+...|....+++.+.|..|.++.|-..   .++.+.....+...+++.++       .....
T Consensus       122 ~~~~~~~~~~-----~~~~~~kgi~~Ll~stigy~~Y~~~~~~~~---~~~~~~~lPqaiGm~i~a~i-------~~~~~  186 (269)
T PF06800_consen  122 YQDKKSDKSS-----SKSNMKKGILALLISTIGYWIYSVIPKAFH---VSGWSAFLPQAIGMLIGAFI-------FNLFS  186 (269)
T ss_pred             cccccccccc-----cccchhhHHHHHHHHHHHHHHHHHHHHhcC---CChhHhHHHHHHHHHHHHHH-------Hhhcc
Confidence            8765433211     234566799999999999999999988643   23333322222212222221       11111


Q ss_pred             CCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHH----HHHHHH
Q 047775          290 IEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAI----YILGSA  365 (386)
Q Consensus       290 ~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~----~~~G~~  365 (386)
                       +.   ...+...|.- +..|++ -.++..++..+.+..+.+.+-...-+.+.++.+.+.+++||+=+..    .++|.+
T Consensus       187 -~~---~~~~k~~~~n-il~G~~-w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~  260 (269)
T PF06800_consen  187 -KK---PFFEKKSWKN-ILTGLI-WGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLI  260 (269)
T ss_pred             -cc---cccccchHHh-hHHHHH-HHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHH
Confidence             11   1122333433 334543 5678888888999999998888888886669999999999987765    456888


Q ss_pred             HHHHHHHH
Q 047775          366 QVFAGFVI  373 (386)
Q Consensus       366 lIi~g~~l  373 (386)
                      +|++|.++
T Consensus       261 Liv~G~il  268 (269)
T PF06800_consen  261 LIVIGAIL  268 (269)
T ss_pred             HHHHhhhc
Confidence            88888654

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown

Probab=98.98  E-value=2.7e-10  Score=92.58  Aligned_cols=62  Identities=15%  Similarity=0.221  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775          148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT  209 (386)
Q Consensus       148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~  209 (386)
                      ...++.++++|+++++++.++.+.++.|+++.++++++++|++++++++|+++.++|++++.
T Consensus        64 ~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~  125 (126)
T PF00892_consen   64 TALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS  125 (126)
T ss_pred             eehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            45688899999999999999999999999999999999999999999999999999987653

Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.96  E-value=2.8e-08  Score=84.02  Aligned_cols=144  Identities=18%  Similarity=0.264  Sum_probs=106.6

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCCC---CCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc-eecC-----CChhH
Q 047775          232 GDLFGLLSAMSYGLFTVLLKKFCGEE---GEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK-FTIP-----HSAKM  302 (386)
Q Consensus       232 G~~l~l~aa~~~a~~~v~~k~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~-~~~~-----~~~~~  302 (386)
                      |.+++++|.++.|++.++.|+..+++   ....+......+.+..+.+.+.|..+.......... ....     .+...
T Consensus         1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~   80 (153)
T PF03151_consen    1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF   80 (153)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence            67899999999999999999988752   244555666666667777666555333221110000 0011     13345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775          303 EEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       303 ~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~  376 (386)
                      +..++..|++ ..+.+...+..+++++|...++...+..++..+++++++||+++..+++|.++.+.|++++++
T Consensus        81 ~~~~~~~~~~-~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy  153 (153)
T PF03151_consen   81 IFLLILSGLL-AFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY  153 (153)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence            6666767765 567777888899999999999999999888999999999999999999999999999988754

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PRK13499 rhamnose-proton symporter; Provisional

Probab=98.92  E-value=5.9e-07  Score=85.11  Aligned_cols=240  Identities=10%  Similarity=0.041  Sum_probs=141.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccc-------hHHHHHHHHHhhhceE
Q 047775          135 REIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTL-------NVAKVVAVLVSMAGVA  206 (386)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~-------~~~~~~~v~l~~~Gv~  206 (386)
                      ...+..+++.+.+|...|..++.++++..++.+.-+. .+.-+...++..++++|=.       ...-++|+++.++|++
T Consensus        70 ~~~~~~~~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~  149 (345)
T PRK13499         70 GSTLLPVFLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVA  149 (345)
T ss_pred             HHHHHHHHHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHH
Confidence            3566778888999999999999999999999998885 6888999999998887533       2347789999999999


Q ss_pred             EEEecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHH-------HHHHHhcCCCCCcchHHHHHHHHHHHHHHHHH
Q 047775          207 MTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFT-------VLLKKFCGEEGEKIDVQKLFGYIGLFTLVALW  279 (386)
Q Consensus       207 lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~-------v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~  279 (386)
                      +....+...+.+.+.++..+.+...|.++++++.+.++.|.       ...+.......++...........+++..+.-
T Consensus       150 l~s~Ag~~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n  229 (345)
T PRK13499        150 IVGRAGQLKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITN  229 (345)
T ss_pred             HHHHhhhhcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHH
Confidence            99883322111110000134566789999999999999999       43333211111111111111110111111110


Q ss_pred             HHHHHHHhhcCCCcee----cCCChhHHHHH----HHHHHHHHHHHHHHHHHHHHhhhhHHHH----HHhhhhHHHHHHH
Q 047775          280 WLVWPLTALGIEPKFT----IPHSAKMEEVV----LANGFVGSVLSDYFWALCVVWTTPLVAT----LGMSLTIPLAMVA  347 (386)
Q Consensus       280 ~~~~~~~~~~~e~~~~----~~~~~~~~~~i----~~~~i~~s~l~~~l~~~~~~~~~~~~~s----~~~~l~~p~a~i~  347 (386)
                      ..........-++ +.    ...+...+.--    +..|+. -.+++.++..+-.+.+.....    +.+.+.+.++.+.
T Consensus       230 ~~~~~~~~~k~~~-~~~~~~~~~~~~~~~~n~l~~~l~G~~-W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~Viistlw  307 (345)
T PRK13499        230 LGFCFIRLAKNKD-LSLKADFSLAKPLLITNVLLSALAGVM-WYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLW  307 (345)
T ss_pred             HHHHHHHHhhCCC-cccchhccccchhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHh
Confidence            0000000001111 11    11111111211    233332 456666777776666433222    2224453459999


Q ss_pred             HHHHcCCcch------HHHHHHHHHHHHHHHHHhcc
Q 047775          348 DMVIHGRHYS------AIYILGSAQVFAGFVIVNVS  377 (386)
Q Consensus       348 ~~i~~ge~~~------~~~~~G~~lIi~g~~l~~~~  377 (386)
                      +.+ ++|.=+      ...++|.+++++|..+....
T Consensus       308 Gi~-lkE~K~a~~k~~~~l~~G~vliI~g~~lig~~  342 (345)
T PRK13499        308 GLV-LKEWKGASRRPVRVLSLGCVVIILAANIVGLG  342 (345)
T ss_pred             hhh-hhhccCCCccchhHHHHHHHHHHHHHHHHhhc
Confidence            984 999866      67789999999998887654

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.88  E-value=2.9e-07  Score=84.57  Aligned_cols=223  Identities=15%  Similarity=0.133  Sum_probs=154.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775          134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT  213 (386)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~  213 (386)
                      .|+++...++.    +...++-..+++|.++...+++-+..|+++++....++|.|++...+.++....+|.......+.
T Consensus        77 ~kk~~P~~~lf----~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~  152 (314)
T KOG1444|consen   77 AKKWFPVSLLF----VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL  152 (314)
T ss_pred             HHHHccHHHHH----HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc
Confidence            45555555443    34455567899999999999999999999999999999999999999999999999888776653


Q ss_pred             CCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCC-
Q 047775          214 WAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEP-  292 (386)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~-  292 (386)
                      .             ....|..|++...++-+.+.+..||..+..  ...-...+.+-.++.++.+...   .... .|. 
T Consensus       153 s-------------f~~~gY~w~~~n~~~~a~~~v~~kk~vd~~--~l~~~~lv~yNnl~~L~~l~~~---~~~~-ge~~  213 (314)
T KOG1444|consen  153 S-------------FNLRGYSWALANCLTTAAFVVYVKKSVDSA--NLNKFGLVFYNNLLSLPPLLIL---SFIT-GELD  213 (314)
T ss_pred             e-------------ecchhHHHHHHHHHHHHHHHHHHHHhhccc--cccceeEEeehhHHHHHHHHHH---HHHh-cchH
Confidence            2             234589999999999999999999987632  1111111111122233221111   1111 110 


Q ss_pred             --ceec--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Q 047775          293 --KFTI--PHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVF  368 (386)
Q Consensus       293 --~~~~--~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi  368 (386)
                        ..+.  -.+...+..+...++++-++.|.. .+..+..+++..++......-...+...+++++++++...+|..+=+
T Consensus       214 ~l~~~~~~~~~~~~~~~~~lScv~gf~isy~s-~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~  292 (314)
T KOG1444|consen  214 ALSLNFDNWSDSSVLVVMLLSCVMGFGISYTS-FLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGF  292 (314)
T ss_pred             HHHhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHh
Confidence              0111  122345777787888765555544 55677888877777665553337777888889999999999999999


Q ss_pred             HHHHHHhccchh
Q 047775          369 AGFVIVNVSDRL  380 (386)
Q Consensus       369 ~g~~l~~~~~~~  380 (386)
                      .|-+++++...+
T Consensus       293 ~ggv~Y~~~~~~  304 (314)
T KOG1444|consen  293 FGGVLYSYATFR  304 (314)
T ss_pred             hhhhHHhhhhhh
Confidence            998888775533

>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]

Probab=98.83  E-value=2e-08  Score=89.65  Aligned_cols=233  Identities=18%  Similarity=0.216  Sum_probs=142.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHH-HhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775          131 EPTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTT-VLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT  209 (386)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~-~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~  209 (386)
                      +.+.|+.++..    .++|..|.+.++|+++-=+--.- ++-+-+++-+++++++++|+|.+.+|..++++..+|+++-.
T Consensus        61 kiplk~Y~i~V----~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcT  136 (330)
T KOG1583|consen   61 KIPLKDYAITV----AMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICT  136 (330)
T ss_pred             CCchhhhheeh----heeeeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEE
Confidence            34556665443    24566788889999985444444 44577899999999999999999999999999999999988


Q ss_pred             ecCCCCccc--cc---cc-ccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHH-
Q 047775          210 LGKTWAADE--SQ---FS-AANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLV-  282 (386)
Q Consensus       210 ~~~~~~~~~--~~---~~-~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-  282 (386)
                      +..+.+...  ++   .+ .+....+..|..+...+-+..|.-.++++...+++++.  +...+.+.-...++...... 
T Consensus       137 l~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh--~~EalFytH~LsLP~Flf~~~  214 (330)
T KOG1583|consen  137 LFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKH--WKEALFYTHFLSLPLFLFMGD  214 (330)
T ss_pred             eecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHhccchHHHhcc
Confidence            654322111  00   00 01222345787776666666666655555444433322  22333333444444321110 


Q ss_pred             -HHHH---hhcCCCceecCC----ChhHHHHHHHHHHHHHHHHHHHHHHHHHh----hhhHHHHHHhhhhHHHHHHHHHH
Q 047775          283 -WPLT---ALGIEPKFTIPH----SAKMEEVVLANGFVGSVLSDYFWALCVVW----TTPLVATLGMSLTIPLAMVADMV  350 (386)
Q Consensus       283 -~~~~---~~~~e~~~~~~~----~~~~~~~i~~~~i~~s~l~~~l~~~~~~~----~~~~~~s~~~~l~~p~a~i~~~i  350 (386)
                       +.-+   ....|+ ...|.    -+..|..++.     +++.++.-.+++-.    +++..+++...+.--++.+++.+
T Consensus       215 div~~~~~~~~se~-~~~p~~g~~vP~~~~yLl~-----n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~Sii  288 (330)
T KOG1583|consen  215 DIVSHWRLAFKSES-YLIPLLGFKVPSMWVYLLF-----NVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSII  288 (330)
T ss_pred             hHHHHHHHHhcCcc-eeccccCccccHHHHHHHH-----HHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheee
Confidence             0001   111221 22222    1234544443     44555554555443    44556666667775669999999


Q ss_pred             HcCCcchHHHHHHHHHHHHHHHHHh
Q 047775          351 IHGRHYSAIYILGSAQVFAGFVIVN  375 (386)
Q Consensus       351 ~~ge~~~~~~~~G~~lIi~g~~l~~  375 (386)
                      .+.+++++..|+|+.+++.|.++..
T Consensus       289 yF~Npft~~h~lGa~lVF~Gt~~fa  313 (330)
T KOG1583|consen  289 YFENPFTPWHWLGAALVFFGTLLFA  313 (330)
T ss_pred             EecCCCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999987764

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.78  E-value=1.7e-08  Score=81.02  Aligned_cols=63  Identities=21%  Similarity=0.247  Sum_probs=58.9

Q ss_pred             HHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775          150 VTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT  213 (386)
Q Consensus       150 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~  213 (386)
                      .++.++++|+++.+ +.++.+.+++|+++.+++++++|||++++++++++++++|++++..++.
T Consensus        47 ~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~  109 (113)
T PF13536_consen   47 VAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL  109 (113)
T ss_pred             HHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence            57789999999999 5888999999999999999999999999999999999999999988764

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=98.73  E-value=1.5e-07  Score=88.28  Aligned_cols=233  Identities=14%  Similarity=0.136  Sum_probs=133.4

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCC
Q 047775          136 EIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWA  215 (386)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~  215 (386)
                      ..++.|+.   .+.+++.+.+.|+.+.|++..+-+.+..-++..+++..++|||++++.+.|+.+++.|..+++..+..+
T Consensus        51 ~~W~~G~~---~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~  127 (300)
T PF05653_consen   51 PLWWIGLL---LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKE  127 (300)
T ss_pred             HHHHHHHH---HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence            44555544   334577788999999999999999999999999999999999999999999999999998887655432


Q ss_pred             cccccccc--c--CCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCC-cchHHHHHHHHHHHHHHHHHHHH-HHHHhhc
Q 047775          216 ADESQFSA--A--NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGE-KIDVQKLFGYIGLFTLVALWWLV-WPLTALG  289 (386)
Q Consensus       216 ~~~~~~~~--~--~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~  289 (386)
                      .+..+.++  .  ....+.. .. .+...+...+.....+|..+++.- .......+   |.++.+..=-.. .....  
T Consensus       128 ~~~~t~~~l~~~~~~~~fl~-y~-~~~~~~~~~L~~~~~~r~g~~~i~vyi~i~sl~---Gs~tvl~~K~i~~~i~~~--  200 (300)
T PF05653_consen  128 EPIHTLDELIALLSQPGFLV-YF-ILVLVLILILIFFIKPRYGRRNILVYISICSLI---GSFTVLSAKAISILIKLT--  200 (300)
T ss_pred             CCcCCHHHHHHHhcCcceeh-hH-HHHHHHHHHHHHhhcchhcccceEEEEEEeccc---cchhhhHHHHHHHHHHHH--
Confidence            22111100  0  0111111 11 111112222222222232221100 00011111   111111100000 00111  


Q ss_pred             CCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcc--hH----HHHH
Q 047775          290 IEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHY--SA----IYIL  362 (386)
Q Consensus       290 ~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~--~~----~~~~  362 (386)
                      .+++.++ ..+..|..++.. +.+.+.-..+.|+++++.+++.+....+..--. +++-+.++++|.-  +.    ....
T Consensus       201 ~~g~~~f-~~~~~y~l~~~~-v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~  278 (300)
T PF05653_consen  201 FSGDNQF-TYPLTYLLLLVL-VVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLC  278 (300)
T ss_pred             hcCchhh-hhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHH
Confidence            1111122 223445444433 334566667788999999988777666655455 8888899999753  44    5567


Q ss_pred             HHHHHHHHHHHHhccchh
Q 047775          363 GSAQVFAGFVIVNVSDRL  380 (386)
Q Consensus       363 G~~lIi~g~~l~~~~~~~  380 (386)
                      |+.+++.|+++.+..+..
T Consensus       279 G~~~ii~GV~lL~~~~~~  296 (300)
T PF05653_consen  279 GFLIIIIGVFLLSSSKDK  296 (300)
T ss_pred             HHHHHHHhhheeeccCch
Confidence            899999999998765443

>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=98.69  E-value=9.3e-09  Score=91.63  Aligned_cols=212  Identities=17%  Similarity=0.197  Sum_probs=146.2

Q ss_pred             HHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhH
Q 047775          155 SNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDL  234 (386)
Q Consensus       155 ~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~  234 (386)
                      -++.++|.+++-.-+=-++.-+|+.+++++++|+|-+..-..++.+.+.|-.+=+-.++.          ...-...|.+
T Consensus       119 nnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~----------~~~ls~~Gvi  188 (347)
T KOG1442|consen  119 NNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGS----------TGTLSWIGVI  188 (347)
T ss_pred             cceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccc----------cCccchhhhH
Confidence            368899999998888888999999999999999999998888888877776553322211          2345678999


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecC--CChhHHHHHHHHHHH
Q 047775          235 FGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIP--HSAKMEEVVLANGFV  312 (386)
Q Consensus       235 l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~--~~~~~~~~i~~~~i~  312 (386)
                      +++.|+++-|+..+..||.....++  ....+..+..+.+.++..|......-  .+..+..|  +...+|..+...|++
T Consensus       189 fGVlaSl~vAlnaiytkk~l~~v~~--~iw~lt~ynnv~a~lLflpll~lnge--~~~v~~~~~l~a~~Fw~~mtLsglf  264 (347)
T KOG1442|consen  189 FGVLASLAVALNAIYTKKVLPPVGD--CIWRLTAYNNVNALLLFLPLLILNGE--FQAVVGFPHLPAIKFWILMTLSGLF  264 (347)
T ss_pred             HHHHHHHHHHHHHHhhheecccccC--eehhhHHHHHHHHHHHHHHHHHHcch--HHHHcCcccchHHHHHHHHHHHHHH
Confidence            9999999999999999987643222  22444445556666655554222211  11112222  244567777777777


Q ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhh
Q 047775          313 GSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLS  381 (386)
Q Consensus       313 ~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~  381 (386)
                      +-.++|.- .+=++-++|..-.+..+-..-.-.++++.+++|.-+..-|-|-.+|+.|-..+.+.++++
T Consensus       265 gF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~e  332 (347)
T KOG1442|consen  265 GFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHE  332 (347)
T ss_pred             HHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHH
Confidence            55554332 223566778766665554433357888999999999999999999999988887654433

>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter

Probab=98.66  E-value=2.6e-07  Score=85.15  Aligned_cols=58  Identities=17%  Similarity=0.310  Sum_probs=55.0

Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhce
Q 047775          148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGV  205 (386)
Q Consensus       148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv  205 (386)
                      ..+++.+|++++++.+++.++.+.++.|+++.++++++++|+++..+++|+.+.+.|+
T Consensus       202 ~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~  259 (260)
T TIGR00950       202 TALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV  259 (260)
T ss_pred             HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence            4467889999999999999999999999999999999999999999999999999986

>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein

Probab=98.64  E-value=1.4e-06  Score=81.46  Aligned_cols=134  Identities=13%  Similarity=-0.010  Sum_probs=91.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHHH
Q 047775          233 DLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFV  312 (386)
Q Consensus       233 ~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i~  312 (386)
                      ..+.+++++++|...+..||..+++ ..   ..+..  .....+.+.|..   .....+..+.. .+...|..++ .+..
T Consensus         3 ~~~~~~aa~~~a~~~~~~k~~~~~~-~~---~~~~~--~~~~~~~l~~~~---~~~~~~~~~~~-~~~~~~~~~~-~~~~   71 (281)
T TIGR03340         3 LTLVVFSALMHAGWNLMAKSHADKE-PD---FLWWA--LLAHSVLLTPYG---LWYLAQVGWSR-LPATFWLLLA-ISAV   71 (281)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCch-hH---HHHHH--HHHHHHHHHHHH---HHhcccCCCCC-cchhhHHHHH-HHHH
Confidence            4678999999999999999877642 11   11111  122333333321   11101111221 2223343344 4444


Q ss_pred             HHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcc
Q 047775          313 GSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVS  377 (386)
Q Consensus       313 ~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~  377 (386)
                      +....+.++++++++.++..+++..+..++++++++++++||+++..+++|.++++.|+++...+
T Consensus        72 ~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~  136 (281)
T TIGR03340        72 ANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLS  136 (281)
T ss_pred             HHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcc
Confidence            67888999999999999999999999994449999999999999999999999999999887653

This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=98.60  E-value=3.8e-07  Score=74.48  Aligned_cols=123  Identities=21%  Similarity=0.179  Sum_probs=89.2

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHH
Q 047775          231 VGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANG  310 (386)
Q Consensus       231 ~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~  310 (386)
                      .|.++.+.+.++-+...++.|+-.++.++ .+....    .. ...        ...  .        ++   ...++.|
T Consensus         2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~~----~~-~~~--------~~~--~--------~p---~~~i~lg   54 (129)
T PRK02971          2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAWD----FI-AAL--------LAF--G--------LA---LRAVLLG   54 (129)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchhH----HH-HHH--------HHH--h--------cc---HHHHHHH
Confidence            36788888988889999999987654221 211110    00 000        000  0        11   1256778


Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHH--HcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775          311 FVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMV--IHGRHYSAIYILGSAQVFAGFVIVNVSDRL  380 (386)
Q Consensus       311 i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i--~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~  380 (386)
                      +++.++++.+|.+++++.+...+....++...+..+.++.  ++||++|+.+++|.++|++|++++++++++
T Consensus        55 l~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~~  126 (129)
T PRK02971         55 LAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTTK  126 (129)
T ss_pred             HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCCC
Confidence            8889999999999999999999998888884446667764  899999999999999999999999876654

>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=98.58  E-value=1.7e-06  Score=77.35  Aligned_cols=227  Identities=14%  Similarity=0.164  Sum_probs=156.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 047775          132 PTTREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLG  211 (386)
Q Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~  211 (386)
                      .++|...+++++..-    ..-+-+-++.|.+-....+.-++--+-+++-+.++-+.|..+....+..+-.+|.++....
T Consensus       104 iP~rtY~~la~~t~g----tmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLA  179 (367)
T KOG1582|consen  104 IPWRTYVILAFLTVG----TMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLA  179 (367)
T ss_pred             cchhHhhhhHhhhhh----ccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhc
Confidence            356666666654332    2333457788888888777778888888899999999999999999999999999999988


Q ss_pred             CCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q 047775          212 KTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIE  291 (386)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e  291 (386)
                      |+..         +++.+..|.++.-.|-++-|+-.-+++|..+.++.+.  ..+..+...++++.+..   ++..+| |
T Consensus       180 Ds~~---------sPNF~~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss--~EmvfySy~iG~vflf~---~mvlTg-e  244 (367)
T KOG1582|consen  180 DSQT---------SPNFNLIGVMMISGALLADAVIGNVQEKAMKMNPASS--SEMVFYSYGIGFVFLFA---PMVLTG-E  244 (367)
T ss_pred             cccc---------CCCcceeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCc--ceEEEeeecccHHHHHH---HHHhcc-c
Confidence            7643         3445678999988888889988888888776533322  12222222233333221   122222 1


Q ss_pred             C--cee--cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHH
Q 047775          292 P--KFT--IPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQV  367 (386)
Q Consensus       292 ~--~~~--~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lI  367 (386)
                      -  .|.  ..++.+.....+..+. .+.++...-...++..++..+.......--++++++++++..++|....-|..+|
T Consensus       245 ~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv  323 (367)
T KOG1582|consen  245 LFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLV  323 (367)
T ss_pred             chhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHH
Confidence            0  011  1223334444443433 3555666666678888888888888888788999999999999999999999999


Q ss_pred             HHHHHHHhccc
Q 047775          368 FAGFVIVNVSD  378 (386)
Q Consensus       368 i~g~~l~~~~~  378 (386)
                      +.|+++-.+++
T Consensus       324 ~lgI~Ln~ysk  334 (367)
T KOG1582|consen  324 VLGIYLNMYSK  334 (367)
T ss_pred             HHHHHhhcccC
Confidence            99999876654

>TIGR00803 nst UDP-galactose transporter

Probab=98.57  E-value=2e-06  Score=77.47  Aligned_cols=185  Identities=17%  Similarity=0.095  Sum_probs=104.1

Q ss_pred             ccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHH
Q 047775          173 TSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKK  252 (386)
Q Consensus       173 ~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~  252 (386)
                      ..-+.+.++.+...+.+.+..++.+......|+.....++..+..      ...++...|....+.++.+-+.-.++.++
T Consensus        33 ~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~------~~~g~~~~g~~~~l~a~~~~~~~~~y~e~  106 (222)
T TIGR00803        33 LKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKT------LMFGNPVVGLSAVLSALLSSGFAGVYFEK  106 (222)
T ss_pred             HHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccc------cccccHHHHHHHHHHHHHHHhhhHHHHHH
Confidence            333444444444445555555555555445555444333221100      01234567777778888887888888888


Q ss_pred             hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc--ee--cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 047775          253 FCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK--FT--IPHSAKMEEVVLANGFVGSVLSDYFWALCVVWT  328 (386)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~--~~--~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~  328 (386)
                      ..+++ +.. .........+++.+.....   ....+.+..  +.  ...+...|..+     +.+.++..+..+.+++.
T Consensus       107 ~~k~~-~~~-~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~a~~~~~v~~vlk~~  176 (222)
T TIGR00803       107 ILKDG-DTM-FWSRNLQLPLFGLFSTFSV---LLWSDGTLISNFGFFIGYPTAVWIVG-----LLNVGGGLCIGGVVRYA  176 (222)
T ss_pred             cccCC-CCc-hHHHHHHHHHHHHHHHHHH---HhhcccchhhccCcccCCchHHHHHH-----HHHHhcCceeeehhHHh
Confidence            65532 211 1111111122222211110   111111110  00  11222223222     23555666788899999


Q ss_pred             hhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Q 047775          329 TPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVI  373 (386)
Q Consensus       329 ~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l  373 (386)
                      ++...+....+++.++.+++++++||+++..+++|+.+++.|+++
T Consensus       177 ~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       177 DNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            999999999999556999999999999999999999999998754

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>PLN00411 nodulin MtN21 family protein; Provisional

Probab=98.50  E-value=7e-07  Score=86.04  Aligned_cols=64  Identities=16%  Similarity=0.196  Sum_probs=59.4

Q ss_pred             HHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775          150 VTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT  213 (386)
Q Consensus       150 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~  213 (386)
                      ++..+|++++++.+++.+++..++.|+++.++++++++|++++.+++|.++.+.|++++.....
T Consensus       268 lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~~~  331 (358)
T PLN00411        268 VYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWGKA  331 (358)
T ss_pred             HHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhhhh
Confidence            4677999999999999999999999999999999999999999999999999999999875443

>PRK15430 putative chloramphenical resistance permease RarD; Provisional

Probab=98.45  E-value=6.4e-06  Score=77.64  Aligned_cols=138  Identities=15%  Similarity=0.163  Sum_probs=94.3

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceec-CCChhHHHHH
Q 047775          228 RSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTI-PHSAKMEEVV  306 (386)
Q Consensus       228 ~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~-~~~~~~~~~i  306 (386)
                      +...|.++.++++++|+...+..|.. .+    .+......+-..++.+++.+.   ....+....... ..+.+.+.. 
T Consensus         5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~----~~~~~~~~~R~~~a~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~-   75 (296)
T PRK15430          5 QTRQGVLLALAAYFIWGIAPAYFKLI-YY----VPADEILTHRVIWSFFFMVVL---MSICRQWSYLKTLIQTPQKIFM-   75 (296)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHHHh-cC----CCHHHHHHHHHHHHHHHHHHH---HHHHccHHHHHHHHcCHHHHHH-
Confidence            45679999999999999999999764 21    333344333333444332222   111110000000 012233322 


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh
Q 047775          307 LANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYILGSAQVFAGFVIVN  375 (386)
Q Consensus       307 ~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~  375 (386)
                      ...+.++..+.+.+++++++++++..+++..+.. |+ .+++++++++|+++..+++|.++.+.|+++..
T Consensus        76 ~~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~-Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~  144 (296)
T PRK15430         76 LAVSAVLIGGNWLLFIWAVNNHHMLEASLGYFIN-PLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL  144 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHH-HHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence            3345556778899999999999999999999988 66 99999999999999999999999999988765

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=98.39  E-value=4.2e-06  Score=76.90  Aligned_cols=228  Identities=13%  Similarity=0.125  Sum_probs=132.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCCCC
Q 047775          136 EIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKTWA  215 (386)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~~~  215 (386)
                      ++++.|++   .+.+.+...|.|..|.|++..+.+.+++.+..++++..+++||+++...+|+.++++|-.+++.+...+
T Consensus        65 ~~Ww~G~l---tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e  141 (335)
T KOG2922|consen   65 PLWWAGML---TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE  141 (335)
T ss_pred             HHHHHHHH---HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence            45555554   344677788999999999999999999999999999999999999999999999999998888766543


Q ss_pred             cccccccc--c--CCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHH---HHHHHHHHHH--HHHHHHHHH
Q 047775          216 ADESQFSA--A--NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLF---GYIGLFTLVA--LWWLVWPLT  286 (386)
Q Consensus       216 ~~~~~~~~--~--~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~---~~~~~~~~~~--l~~~~~~~~  286 (386)
                      .+-.+...  .  ....+..-..+.++ .  ..+-....|+   +++. .++....   +..|-++...  .+-.++-..
T Consensus       142 ~~i~t~~el~~~~~~~~Fliy~~~iil-~--~~il~~~~~p---~~g~-tnilvyi~i~s~iGS~tV~svKalg~aiklt  214 (335)
T KOG2922|consen  142 QEIESVEEVWELATEPGFLVYVIIIIL-I--VLILIFFYAP---RYGQ-TNILVYIGICSLIGSLTVMSVKALGIAIKLT  214 (335)
T ss_pred             cccccHHHHHHHhcCccHHHHHHHHHH-H--HHHHheeecc---cccc-cceeehhhHhhhhcceeeeeHHHHHHHHHHH
Confidence            22111000  0  11111111111111 1  1111111121   1111 1111111   1222111110  000011122


Q ss_pred             hhcCCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcch------HH
Q 047775          287 ALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYS------AI  359 (386)
Q Consensus       287 ~~~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~------~~  359 (386)
                      +.|   ..+... +..|..++..+. +...-....+++++..++..++...+..--. +++.+.+++.|.-.      ..
T Consensus       215 ~~g---~~ql~~-~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~  289 (335)
T KOG2922|consen  215 FSG---NNQLFY-PLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAG  289 (335)
T ss_pred             hcC---Cccccc-HHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHH
Confidence            222   122222 244555444433 3455555678999999988877777755444 88888888887432      26


Q ss_pred             HHHHHHHHHHHHHHHhccc
Q 047775          360 YILGSAQVFAGFVIVNVSD  378 (386)
Q Consensus       360 ~~~G~~lIi~g~~l~~~~~  378 (386)
                      ...|+..++.|+.++...+
T Consensus       290 ~~~Gf~ti~~G~flL~~~k  308 (335)
T KOG2922|consen  290 ELCGFVTIFLGIFLLHRTK  308 (335)
T ss_pred             HHHhHHHhhheeeEeeeec
Confidence            6789999999998886543

>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]

Probab=98.39  E-value=2.5e-06  Score=74.16  Aligned_cols=228  Identities=16%  Similarity=0.176  Sum_probs=154.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775          134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT  213 (386)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~  213 (386)
                      .|+++..+++....    -+.-..+++|.++...++.-++..+.++.....+++.|++-....+-++.+..-+.-..+|.
T Consensus        68 aK~WfpiSfLLv~M----Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~  143 (309)
T COG5070          68 AKKWFPISFLLVVM----IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQ  143 (309)
T ss_pred             hhhhcCHHHHHHHH----HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchh
Confidence            46777777665543    23446899999999999999999999999999999999999888887776665444443332


Q ss_pred             CCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 047775          214 WAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPK  293 (386)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~  293 (386)
                      ....      -......-|.+|+...++.-|.|....||..+-. ..-+ .-.+.+-.++++++++..  -+.   +|. 
T Consensus       144 q~~~------~~~~~lN~GY~Wm~~NclssaafVL~mrkri~lt-Nf~d-~dtmfYnNllslPiL~~~--s~~---~ed-  209 (309)
T COG5070         144 QASA------FKAQILNPGYLWMFTNCLSSAAFVLIMRKRIKLT-NFKD-FDTMFYNNLLSLPILLSF--SFL---FED-  209 (309)
T ss_pred             hHHH------HHhcccCCceEEEehhhHhHHHHHHHHHHhhccc-ccch-hhHHHHhhhHHHHHHHHH--HHH---hcc-
Confidence            1100      0223455699999999999999999999876521 1111 223334456666654322  111   332 


Q ss_pred             ee---cC--CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHH
Q 047775          294 FT---IP--HSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVF  368 (386)
Q Consensus       294 ~~---~~--~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi  368 (386)
                      |.   +.  ........+...|+. ++.--++-.|.++-++.+.-++...+.--..++.+.++++|+.+...+....+=.
T Consensus       210 ws~~n~annl~~d~l~am~ISgl~-svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGf  288 (309)
T COG5070         210 WSPGNLANNLSVDSLMAMFISGLC-SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGF  288 (309)
T ss_pred             CCcchhhcCCChHHHHHHHHHHHH-HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHH
Confidence            21   11  112234456666764 5555567788899999999888888884447788999999999999999888777


Q ss_pred             HHHHHHhccchh
Q 047775          369 AGFVIVNVSDRL  380 (386)
Q Consensus       369 ~g~~l~~~~~~~  380 (386)
                      .+-+++.....+
T Consensus       289 lsg~iYavaks~  300 (309)
T COG5070         289 LSGAIYAVAKSK  300 (309)
T ss_pred             HHHHHHHHHHHH
Confidence            776666554433

>PRK10532 threonine and homoserine efflux system; Provisional

Probab=98.37  E-value=3.7e-06  Score=79.10  Aligned_cols=64  Identities=19%  Similarity=0.107  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEec
Q 047775          148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLG  211 (386)
Q Consensus       148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~  211 (386)
                      -.+++.+|++++++.+++.++++.++.|++..++++++++|+++..+++|..+.+.|++.....
T Consensus       219 t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~  282 (293)
T PRK10532        219 TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT  282 (293)
T ss_pred             HHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            3457779999999999999999999999999999999999999999999999999998877543

>TIGR00688 rarD rarD protein

Probab=98.35  E-value=2.1e-05  Score=72.37  Aligned_cols=136  Identities=14%  Similarity=0.191  Sum_probs=93.5

Q ss_pred             hhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcC-C---CceecCCChhHHHHH
Q 047775          231 VGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGI-E---PKFTIPHSAKMEEVV  306 (386)
Q Consensus       231 ~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-e---~~~~~~~~~~~~~~i  306 (386)
                      .|..+.++++++|+...+..|.. .+    .+......+-.+++.+++.+.   ....+. .   +..+.....+.+..+
T Consensus         2 ~g~~~~i~a~~~wg~~~~~~k~~-~~----~~~~~i~~~R~~~a~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   73 (256)
T TIGR00688         2 KGIIVSLLASFLFGYMYYYSKLL-KP----LPATDILGHRMIWSFPFMLLS---VTLFRQWAALIERLKRIQKRPLILSL   73 (256)
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHh-cc----CCHHHHHHHHHHHHHHHHHHH---HHHHcchHHHHHHHhCcccchHHHHH
Confidence            38899999999999999999973 21    333333333344444333221   111110 0   001111112223345


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775          307 LANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       307 ~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~  376 (386)
                      ...|++ ..+.+.+++++++++++..+++..+.. |+ ++++++++++|+++..+++|.++.++|+.+...
T Consensus        74 ~~~g~~-~~~~~~~~~~a~~~~~~~~a~~l~~~~-Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~  142 (256)
T TIGR00688        74 LLCGLL-IGFNWWLFIWAVNNGSSLEVSLGYLIN-PLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV  142 (256)
T ss_pred             HHHHHH-HHHHHHHHHHHHHcchHHHHHHHHHHH-HHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence            556654 678899999999999999999999988 66 999999999999999999999999999887643

This uncharacterized protein is predicted to have many membrane-spanning domains.

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.34  E-value=1.2e-06  Score=69.71  Aligned_cols=64  Identities=8%  Similarity=0.032  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775          146 PIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT  209 (386)
Q Consensus       146 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~  209 (386)
                      ..+..+.+++..+++..+.+.+..+.++.++++.+++++++|||++++|++|+.+.++|++++.
T Consensus        45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~  108 (111)
T PRK15051         45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG  108 (111)
T ss_pred             HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence            4566788899999999999999999999999999999999999999999999999999998764

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=98.33  E-value=1.2e-07  Score=83.51  Aligned_cols=220  Identities=15%  Similarity=0.177  Sum_probs=156.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhc-ccHHHHHHHHHHhccccchHHH----HHHHHHhhhceEEE
Q 047775          134 TREIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSS-TSGLFTLFIGAFMGQDTLNVAK----VVAVLVSMAGVAMT  208 (386)
Q Consensus       134 ~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~lls~~~~~ek~~~~~----~~~v~l~~~Gv~lv  208 (386)
                      ..+.+..+++.+.+|-+.|..++.|+++..++++.-+.+ ..-+-+-+++++.++|-.+..+    .+|+++.++|+++-
T Consensus        55 T~~~~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lT  134 (288)
T COG4975          55 TLTIFIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLT  134 (288)
T ss_pred             chhhHHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEe
Confidence            357788899999999999999999999999999999965 6678889999999999887654    45888899999999


Q ss_pred             EecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 047775          209 TLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTAL  288 (386)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  288 (386)
                      ++.+..+.+++     +.++.-.|....+.|.+.|-.|.++.+-..-   +..+.....+...+++.+.       +...
T Consensus       135 s~~~~~nk~~~-----~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~v---~g~saiLPqAiGMv~~ali-------~~~~  199 (288)
T COG4975         135 SKQDRNNKEEE-----NPSNLKKGIVILLISTLGYVGYVVLFQLFDV---DGLSAILPQAIGMVIGALI-------LGFF  199 (288)
T ss_pred             eeecccccccc-----ChHhhhhheeeeeeeccceeeeEeeeccccc---cchhhhhHHHHHHHHHHHH-------Hhhc
Confidence            98775433322     4555667999999999999999999887642   2333322233223333322       2222


Q ss_pred             cCCCceecCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHH----HHH
Q 047775          289 GIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYI----LGS  364 (386)
Q Consensus       289 ~~e~~~~~~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~----~G~  364 (386)
                      +.|    .+.++..|.- +..|++ -.++...+..+.++.+-...-.+.-+...++.+-+.++++|+=|..++    +|.
T Consensus       200 ~~~----~~~~K~t~~n-ii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGi  273 (288)
T COG4975         200 KME----KRFNKYTWLN-IIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGI  273 (288)
T ss_pred             ccc----cchHHHHHHH-HhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhH
Confidence            222    2334444543 345554 577788888888887755554455566456999999999999887664    577


Q ss_pred             HHHHHHHHHH
Q 047775          365 AQVFAGFVIV  374 (386)
Q Consensus       365 ~lIi~g~~l~  374 (386)
                      +++++|..+.
T Consensus       274 ilivvgai~l  283 (288)
T COG4975         274 ILIVVGAILL  283 (288)
T ss_pred             HHHHHHhhhh
Confidence            8888876554

>PRK11689 aromatic amino acid exporter; Provisional

Probab=98.27  E-value=8.4e-06  Score=76.77  Aligned_cols=64  Identities=13%  Similarity=0.020  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775          147 IWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL  210 (386)
Q Consensus       147 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~  210 (386)
                      .-.+++++|++++++.+++.++.+.++.|++..++++++++|+++..+++|.++.+.|+++...
T Consensus       224 ~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~  287 (295)
T PRK11689        224 AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL  287 (295)
T ss_pred             HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence            4456888999999999999999999999999999999999999999999999999999877654

>PRK11453 O-acetylserine/cysteine export protein; Provisional

Probab=98.19  E-value=1.9e-05  Score=74.47  Aligned_cols=66  Identities=18%  Similarity=0.144  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775          147 IWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK  212 (386)
Q Consensus       147 ~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~  212 (386)
                      .-.++..+|+.++++.++++++.+..+.|++..++++++++|+++..+++|.++.++|+++...+.
T Consensus       224 ~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~  289 (299)
T PRK11453        224 ATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGL  289 (299)
T ss_pred             HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcch
Confidence            344577789999999999999999999999999999999999999999999999999998765443

>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional

Probab=98.18  E-value=9.7e-06  Score=76.24  Aligned_cols=63  Identities=19%  Similarity=0.166  Sum_probs=58.4

Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775          148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL  210 (386)
Q Consensus       148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~  210 (386)
                      -..+..+|++++++.++++++.+.++.|++++++++++++|+++..+++|.++.+.|++++..
T Consensus       223 s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~  285 (292)
T PRK11272        223 SIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTL  285 (292)
T ss_pred             HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHH
Confidence            345778999999999999999999999999999999999999999999999999999987654

>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins

Probab=98.13  E-value=3.2e-05  Score=65.17  Aligned_cols=73  Identities=11%  Similarity=0.218  Sum_probs=65.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775          136 EIATIGFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT  208 (386)
Q Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv  208 (386)
                      +.....+..+++++..|++.+..++++++...+++...-.+.+.++++++++|+++..++.|++++++|+++=
T Consensus        79 ~~~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Y  151 (153)
T PF03151_consen   79 NFIFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLY  151 (153)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhee
Confidence            4444555667788889999999999999999999999999999999999999999999999999999998764

O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.

>PF13536 EmrE: Multidrug resistance efflux transporter

Probab=98.10  E-value=3e-05  Score=62.06  Aligned_cols=77  Identities=12%  Similarity=0.160  Sum_probs=64.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775          303 EEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL  380 (386)
Q Consensus       303 ~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~  380 (386)
                      +...+..|+.+...++.++.++.++.++ .++....+.+.+++++++++++|+++..+++|.+++++|++++..++-.
T Consensus        34 ~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~  110 (113)
T PF13536_consen   34 WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDLT  110 (113)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence            4445555666566889999999999995 7778888884449999999999999999999999999999999876543

>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional

Probab=98.10  E-value=4e-05  Score=61.00  Aligned_cols=67  Identities=19%  Similarity=0.174  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775          310 GFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       310 ~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~  376 (386)
                      ++++..+++.++..++++.+...+....++.+..+++.+++++||+++..+++|.++|+.|++++..
T Consensus        43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~  109 (111)
T PRK15051         43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS  109 (111)
T ss_pred             HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            3356778999999999999999999988977334999999999999999999999999999988654

>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator

Probab=98.03  E-value=1.2e-05  Score=75.90  Aligned_cols=63  Identities=13%  Similarity=0.173  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775          148 WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL  210 (386)
Q Consensus       148 ~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~  210 (386)
                      +...|.+++.++++++++++++.....|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus       231 ~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~  293 (302)
T TIGR00817       231 FHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR  293 (302)
T ss_pred             HHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH
Confidence            444567888999999999999999999999999999999999999999999999999987654

specificities overlap.

>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional

Probab=97.94  E-value=9.7e-05  Score=71.30  Aligned_cols=68  Identities=9%  Similarity=0.178  Sum_probs=60.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775          141 GFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT  208 (386)
Q Consensus       141 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv  208 (386)
                      .+..++.+++.|.+.+++++++++.+.++..+..|+++.++++++++|+++..+++|.++.++|+++.
T Consensus       279 i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY  346 (350)
T PTZ00343        279 IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY  346 (350)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence            34445566677777888999999999999999999999999999999999999999999999998764

>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional

Probab=97.77  E-value=7.7e-05  Score=60.93  Aligned_cols=69  Identities=17%  Similarity=0.088  Sum_probs=61.2

Q ss_pred             HHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHH--hccccchHHHHHHHHHhhhceEEEEecC
Q 047775          144 IAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAF--MGQDTLNVAKVVAVLVSMAGVAMTTLGK  212 (386)
Q Consensus       144 ~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~--~~~ek~~~~~~~~v~l~~~Gv~lv~~~~  212 (386)
                      +...+..+.+++..+++..+++.+..+.+..++++.+.++.  +++|++++.|++|+++.++|++++..++
T Consensus        54 gl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~  124 (129)
T PRK02971         54 GLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT  124 (129)
T ss_pred             HHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence            34466778889999999999999999999999999888885  8999999999999999999999987543

>COG2962 RarD Predicted permeases [General function prediction only]

Probab=97.70  E-value=0.00083  Score=61.34  Aligned_cols=138  Identities=17%  Similarity=0.201  Sum_probs=96.1

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCceecCCChhHHHHHH
Q 047775          229 SLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTAL-GIEPKFTIPHSAKMEEVVL  307 (386)
Q Consensus       229 ~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~e~~~~~~~~~~~~~~i~  307 (386)
                      ...|.++++.|-+.|+.--.+.|-+..     .+....++.--+.+++.+...   +... ++...++.-.+++.+....
T Consensus         5 ~~~Gil~~l~Ay~lwG~lp~y~kll~~-----~~~~eIlahRviwS~~~~l~l---l~~~r~~~~~~~~~~~p~~~~~~~   76 (293)
T COG2962           5 SRKGILLALLAYLLWGLLPLYFKLLEP-----LPATEILAHRVIWSFPFMLAL---LFLLRQWRELKQLLKQPKTLLMLA   76 (293)
T ss_pred             ccchhHHHHHHHHHHHHHHHHHHHHcc-----CCHHHHHHHHHHHHHHHHHHH---HHHHhhhHHHHHHHhCcHHHHHHH
Confidence            456999999999999999988887643     222233332222333322111   1111 1111122223455666666


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775          308 ANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       308 ~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~  376 (386)
                      ..++. -......+.++...-....+|++.++. |+ .++++.++++|+++..|++..++-.+|+....+
T Consensus        77 l~a~l-i~~nW~lfiWAvn~g~~leaSLGY~In-PL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~  144 (293)
T COG2962          77 LTALL-IGLNWWLFIWAVNNGHVLEASLGYFIN-PLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW  144 (293)
T ss_pred             HHHHH-HHHHHHHhheecCCCchhHHHhHHHHH-HHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence            66665 577889999999999999999999999 76 999999999999999999999999999876543

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.64  E-value=0.00046  Score=55.40  Aligned_cols=70  Identities=21%  Similarity=0.205  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHH-hhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchhh
Q 047775          312 VGSVLSDYFWALCVVWTTPLVATLG-MSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRLS  381 (386)
Q Consensus       312 ~~s~l~~~l~~~~~~~~~~~~~s~~-~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~~  381 (386)
                      .+-.++++++.+++++.+...+=.. .-+.....++.+++++||++|+.+++|.++|++|++.++...+++
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~~~~  108 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGTRKA  108 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCCCCC
Confidence            3457899999999999875554333 346645589999999999999999999999999999998765544

>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function

Probab=97.63  E-value=0.0015  Score=62.03  Aligned_cols=77  Identities=29%  Similarity=0.344  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775          303 EEVVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL  380 (386)
Q Consensus       303 ~~~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~  380 (386)
                      |+--+..+++ -+-+.++.+.+.++++.+.+.+.....+|++++++++++++++++.+++|+++.+.|+.++...+..
T Consensus        79 ~w~y~lla~~-Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~  155 (334)
T PF06027_consen   79 WWKYFLLALL-DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVL  155 (334)
T ss_pred             HHHHHHHHHH-HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeeccc
Confidence            3333345664 6899999999999999999999999999999999999999999999999999999999988766543

Some of the sequences in this family are annotated as putative membrane proteins.

>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein

Probab=97.62  E-value=0.00029  Score=66.19  Aligned_cols=70  Identities=11%  Similarity=0.238  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHHHHHHHHhc-ccchhhHHHhhcccHHHHHHHHHHhccccchHHHH----HHHHHhhhceEEEEe
Q 047775          141 GFYIAPIWFVTEYFSNAALA-RTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKV----VAVLVSMAGVAMTTL  210 (386)
Q Consensus       141 ~~~~~~~~~~~~~~~~~al~-~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~----~~v~l~~~Gv~lv~~  210 (386)
                      .++.+++|..++.+|+.+++ +.+++.+..+.+..|+...+.+++++||+.+++++    +|.++.+.|+.++..
T Consensus       214 ~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~  288 (290)
T TIGR00776       214 NILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI  288 (290)
T ss_pred             HHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence            34456668899999999999 99999999999999999999999999999999999    999999999887653

These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.

>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]

Probab=97.52  E-value=0.0049  Score=57.18  Aligned_cols=142  Identities=23%  Similarity=0.220  Sum_probs=93.8

Q ss_pred             chhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHH
Q 047775          229 SLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLA  308 (386)
Q Consensus       229 ~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~  308 (386)
                      ...+....+..++.|+......|+...+   ..+..........+.....    .+...  .++....+.. ..+.....
T Consensus         5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~-~~~~~~~~   74 (292)
T COG0697           5 LLLGLLALLLWGLLWGLSFIALKLAVES---LDPFLFAAALRFLIAALLL----LPLLL--LEPRGLRPAL-RPWLLLLL   74 (292)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cCChHHHHHHHHHHHHHHH----HHHHH--hhcccccccc-cchHHHHH
Confidence            4567788888889999999999987652   1111111111111122111    11111  1100011111 11334445


Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHH-HHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775          309 NGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADM-VIHGRHYSAIYILGSAQVFAGFVIVNVSDRL  380 (386)
Q Consensus       309 ~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~-i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~  380 (386)
                      .+.+.....+.+++.+++++++..++...+..+.+..++++ ++++|+++..++.|..+.+.|++++..++..
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~  147 (292)
T COG0697          75 LALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGG  147 (292)
T ss_pred             HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCc
Confidence            55666889999999999999999999999999444999996 7779999999999999999999998876543

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=97.46  E-value=0.0012  Score=52.33  Aligned_cols=68  Identities=18%  Similarity=0.215  Sum_probs=54.9

Q ss_pred             HHHHHHHHHHHHHHHhhhhHHHHH-HhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775          312 VGSVLSDYFWALCVVWTTPLVATL-GMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR  379 (386)
Q Consensus       312 ~~s~l~~~l~~~~~~~~~~~~~s~-~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~  379 (386)
                      .+-.++++++..++++.+...+=- ..-+.....++.+++++||++++.+++|..+|++|++..+..++
T Consensus        38 ~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~~  106 (110)
T PRK09541         38 ICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLSR  106 (110)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCCC
Confidence            345788999999999987554433 34456555899999999999999999999999999999987553

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=97.35  E-value=0.0022  Score=49.91  Aligned_cols=66  Identities=21%  Similarity=0.263  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHhhhhH-HHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775          313 GSVLSDYFWALCVVWTTPL-VATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD  378 (386)
Q Consensus       313 ~s~l~~~l~~~~~~~~~~~-~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~  378 (386)
                      +-.++|.+...++|..+-. --++..-..+...++.+++++||++++.+++|..+++.|++..+..+
T Consensus        39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s  105 (106)
T COG2076          39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS  105 (106)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence            3578899999999998743 33444556645589999999999999999999999999999988754

>PRK11431 multidrug efflux system protein; Provisional

Probab=97.26  E-value=0.0028  Score=49.69  Aligned_cols=66  Identities=17%  Similarity=0.131  Sum_probs=54.0

Q ss_pred             HHHHHHHHHHHHHHhhhhHH-HHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775          313 GSVLSDYFWALCVVWTTPLV-ATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD  378 (386)
Q Consensus       313 ~s~l~~~l~~~~~~~~~~~~-~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~  378 (386)
                      +-.+++++...++|+.+... -++..-+.....++.+++++||++++.+++|..+|+.|++..+..+
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l~~  104 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKLST  104 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhccC
Confidence            45789999999999887443 3444556655589999999999999999999999999999987543

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=97.09  E-value=0.0055  Score=48.33  Aligned_cols=64  Identities=17%  Similarity=0.187  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHHHHhhhhHHH-HHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775          313 GSVLSDYFWALCVVWTTPLVA-TLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       313 ~s~l~~~l~~~~~~~~~~~~~-s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~  376 (386)
                      +-.+++++...++|+.+...+ ++..-+.....++.+++++||++++.+++|.++|+.|++..+.
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lkl  108 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIKL  108 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            357899999999999874433 4444566455899999999999999999999999999998753

>PRK10452 multidrug efflux system protein MdtJ; Provisional

Probab=97.04  E-value=0.0014  Score=52.60  Aligned_cols=67  Identities=15%  Similarity=0.262  Sum_probs=58.7

Q ss_pred             HHHHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775          146 PIWFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK  212 (386)
Q Consensus       146 ~~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~  212 (386)
                      .++..+.+++..++++.+.+.+=.+. ...-+.+.++++++++|++++.|++|+.+.++|++.+-..+
T Consensus        38 ~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~  105 (120)
T PRK10452         38 VMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT  105 (120)
T ss_pred             HHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence            34556778889999999999998885 68899999999999999999999999999999998885443

>PRK09541 emrE multidrug efflux protein; Reviewed

Probab=96.89  E-value=0.0023  Score=50.64  Aligned_cols=64  Identities=11%  Similarity=0.159  Sum_probs=56.5

Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEe
Q 047775          147 IWFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL  210 (386)
Q Consensus       147 ~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~  210 (386)
                      .+..+.+++..++++.|.+.+=.+. ...-+.+.++++++++|++++.+++|+.+.++|++++-.
T Consensus        39 ~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l  103 (110)
T PRK09541         39 CYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINL  103 (110)
T ss_pred             HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            4556677788999999999998884 578999999999999999999999999999999998854

>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function

Probab=96.84  E-value=0.0099  Score=55.96  Aligned_cols=119  Identities=15%  Similarity=0.073  Sum_probs=79.9

Q ss_pred             CcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHH
Q 047775          227 KRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVV  306 (386)
Q Consensus       227 ~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i  306 (386)
                      .+...|..+++.++++.+....++||-..+.+. .....--   .  .                   ...-.++..|..+
T Consensus         3 ~~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~~~~~---~--~-------------------~~~l~~~~W~~G~   57 (300)
T PF05653_consen    3 TDFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSLRAGS---G--G-------------------RSYLRRPLWWIGL   57 (300)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccccccc---h--h-------------------hHHHhhHHHHHHH
Confidence            357789999999999999999999986543221 0000000   0  0                   0000011122222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHh
Q 047775          307 LANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVN  375 (386)
Q Consensus       307 ~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~  375 (386)
                      +     ..+++..+...+....+.+.++....+..+++++++..++||+++..+++|+++++.|..+..
T Consensus        58 ~-----~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv  121 (300)
T PF05653_consen   58 L-----LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV  121 (300)
T ss_pred             H-----HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence            2     123344445566777788888888888877799999999999999999999999999987654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=96.80  E-value=0.054  Score=44.81  Aligned_cols=131  Identities=17%  Similarity=0.152  Sum_probs=81.7

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcee-cCCChhHHHHHHHHH
Q 047775          232 GDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFT-IPHSAKMEEVVLANG  310 (386)
Q Consensus       232 G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~-~~~~~~~~~~i~~~~  310 (386)
                      ..++++.+.++-+++..+..++.++-+++..........|.....+.      ....+.+. .+ .+. . .|+. ..-|
T Consensus         2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~------~~~~~~~~-~~~~~~-~-p~w~-~lGG   71 (138)
T PF04657_consen    2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLII------LLITGRPS-LASLSS-V-PWWA-YLGG   71 (138)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH------HHHhcccc-cchhcc-C-ChHH-hccH
Confidence            35688889999999999998887653334433333333343333321      12211111 11 111 1 1222 2245


Q ss_pred             HHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHH----HcCCcchHHHHHHHHHHHHHHHH
Q 047775          311 FVGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMV----IHGRHYSAIYILGSAQVFAGFVI  373 (386)
Q Consensus       311 i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i----~~ge~~~~~~~~G~~lIi~g~~l  373 (386)
                      ++ +++.-.+....+++.+++.+.......=-+ +.++|.+    .-.+++++.+++|.+++++|+++
T Consensus        72 ~l-G~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   72 LL-GVFFVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HH-HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            54 566667778888999988887766665455 8888886    24578999999999999999864

>PRK13499 rhamnose-proton symporter; Provisional

Probab=96.73  E-value=0.038  Score=52.75  Aligned_cols=141  Identities=16%  Similarity=0.194  Sum_probs=88.7

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCceecCCChhHHHHH
Q 047775          228 RSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTAL-GIEPKFTIPHSAKMEEVV  306 (386)
Q Consensus       228 ~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~e~~~~~~~~~~~~~~i  306 (386)
                      +...|.++++++++|++.+.+-.||. ++    .+...+....+++..++ .|........ ++.... ...+...+..-
T Consensus         4 ~~~~G~~~~~i~~~~~GS~~~p~K~~-k~----w~wE~~W~v~gi~~wl~-~~~~~g~~~~~~f~~~~-~~~~~~~~~~~   76 (345)
T PRK13499          4 AIILGIIWHLIGGASSGSFYAPFKKV-KK----WSWETMWSVGGIFSWLI-LPWLIAALLLPDFWAYY-SSFSGSTLLPV   76 (345)
T ss_pred             hhHHHHHHHHHHHHHhhccccccccc-CC----CchhHHHHHHHHHHHHH-HHHHHHHHHhhhHHHHH-HhcCHHHHHHH
Confidence            46789999999999999999999983 21    22222222223333322 2211111110 000001 11345556666


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hhhhHHHHHHHHHHHcCCcc-------hHHHHHHHHHHHHHHHHHhc
Q 047775          307 LANGFVGSVLSDYFWALCVVWTTPLVATLG-MSLTIPLAMVADMVIHGRHY-------SAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       307 ~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~-~~l~~p~a~i~~~i~~ge~~-------~~~~~~G~~lIi~g~~l~~~  376 (386)
                      ...|++ -.++...+..++++.+.+..-.. .-++..++.++..+++||-.       ....++|.+++++|+++..+
T Consensus        77 ~l~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~  153 (345)
T PRK13499         77 FLFGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR  153 (345)
T ss_pred             HHHHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence            666765 78899999999999996655443 33554458889999998754       23578899999999999887

>PRK10650 multidrug efflux system protein MdtI; Provisional

Probab=96.70  E-value=0.005  Score=48.55  Aligned_cols=62  Identities=16%  Similarity=0.083  Sum_probs=54.3

Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775          147 IWFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT  208 (386)
Q Consensus       147 ~~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv  208 (386)
                      .+..+.++...++++.|.+.+=.+. ..-.+.+.+.++++++|++++.|++++.+.++|++.+
T Consensus        44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l  106 (109)
T PRK10650         44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI  106 (109)
T ss_pred             HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence            4455677888999999999988875 4778999999999999999999999999999998765

>PRK11431 multidrug efflux system protein; Provisional

Probab=96.70  E-value=0.0056  Score=47.99  Aligned_cols=63  Identities=11%  Similarity=0.132  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHhcccchhhHHHhhc-ccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775          147 IWFVTEYFSNAALARTSVASTTVLSS-TSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT  209 (386)
Q Consensus       147 ~~~~~~~~~~~al~~~~~~~~~~i~~-~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~  209 (386)
                      ++..+.++...+++..|.+.+=.+.. .-.+.+.+.++++++|++++.|++++.+.++|++.+-
T Consensus        38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~  101 (105)
T PRK11431         38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK  101 (105)
T ss_pred             HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence            44556778889999999999888764 7889999999999999999999999999999998873

>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]

Probab=96.67  E-value=0.0047  Score=48.06  Aligned_cols=62  Identities=16%  Similarity=0.231  Sum_probs=53.5

Q ss_pred             HHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775          148 WFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT  209 (386)
Q Consensus       148 ~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~  209 (386)
                      +..+.++...|+++.+.+.+=.+. ..-.+.+.+.++++++|+++..|++++.+.++|++.+-
T Consensus        40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk  102 (106)
T COG2076          40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLK  102 (106)
T ss_pred             HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhh
Confidence            344566778899999999987775 57789999999999999999999999999999988763

>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []

Probab=96.66  E-value=0.074  Score=50.19  Aligned_cols=73  Identities=18%  Similarity=0.135  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775          307 LANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL  380 (386)
Q Consensus       307 ~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~  380 (386)
                      ...++ ...++..+.+.++++++...-.+..+..++..++++++++|++.+..++++.+++.+|+.+....+.+
T Consensus        68 ~~~~~-~~~~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~  140 (303)
T PF08449_consen   68 AILSF-LFFLASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS  140 (303)
T ss_pred             HHHHH-HHHHHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence            33344 36777788899999999888888888884449999999999999999999999999999998766533

; GO: 0055085 transmembrane transport

>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]

Probab=96.17  E-value=0.034  Score=49.93  Aligned_cols=74  Identities=18%  Similarity=0.157  Sum_probs=59.3

Q ss_pred             HHHHHHHHHHHH-HHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775          136 EIATIGFYIAPI-WFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT  209 (386)
Q Consensus       136 ~~~~~~~~~~~~-~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~  209 (386)
                      .++..++..+++ -.+.+.+-..+++..+...-+.+.++.|.+..+.++++++|+++..||+++...+++..-..
T Consensus       207 ~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~  281 (292)
T COG5006         207 SLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST  281 (292)
T ss_pred             HHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence            455555554443 23345588899999999999999999999999999999999999999999888776655333

>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles

Probab=96.03  E-value=0.039  Score=50.36  Aligned_cols=67  Identities=15%  Similarity=0.164  Sum_probs=60.6

Q ss_pred             HHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccchh
Q 047775          314 SVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDRL  380 (386)
Q Consensus       314 s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~~  380 (386)
                      -.+...+.+.++++.+|..-.+.....+++++++++++++.+++..+|++..+++.|+.+.+.+...
T Consensus        27 Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~   93 (244)
T PF04142_consen   27 YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQ   93 (244)
T ss_pred             HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcc
Confidence            5667778889999999999999999998889999999999999999999999999999998876543

P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=96.00  E-value=0.018  Score=44.17  Aligned_cols=54  Identities=15%  Similarity=0.236  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHhcccchhhHHHh-hcccHHHHHHHHHHhccccchHHHHHHHHH
Q 047775          147 IWFVTEYFSNAALARTSVASTTVL-SSTSGLFTLFIGAFMGQDTLNVAKVVAVLV  200 (386)
Q Consensus       147 ~~~~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~lls~~~~~ek~~~~~~~~v~l  200 (386)
                      .+..+.+++..++++.+.+.+=.+ ..+..+.+.+.+.++++|++++.|++|+.+
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~l   92 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGL   92 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheee
Confidence            455667788999999999999665 468899999999999999999999999875

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins

Probab=95.96  E-value=0.031  Score=42.86  Aligned_cols=55  Identities=25%  Similarity=0.217  Sum_probs=31.6

Q ss_pred             HHHHHHHHHHHHHHhhhhHHH-HHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHH
Q 047775          313 GSVLSDYFWALCVVWTTPLVA-TLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQV  367 (386)
Q Consensus       313 ~s~l~~~l~~~~~~~~~~~~~-s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lI  367 (386)
                      +-.++++++.+++++.+...+ ++..-+......+.+++++||++|+.+++|..+|
T Consensus        38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI   93 (93)
T PF00893_consen   38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI   93 (93)
T ss_dssp             HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence            467888999999999886666 3344467455899999999999999999999876

They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.

>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long

Probab=95.54  E-value=0.19  Score=46.17  Aligned_cols=66  Identities=15%  Similarity=0.290  Sum_probs=55.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHH----HHHHhhhceE
Q 047775          141 GFYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVV----AVLVSMAGVA  206 (386)
Q Consensus       141 ~~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~----~v~l~~~Gv~  206 (386)
                      .++.+++|..+|.+++.+.+....+.+-.+..+.++...+-+.+++||+=+++++.    |+++.++|.+
T Consensus       198 nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i  267 (269)
T PF06800_consen  198 NILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAI  267 (269)
T ss_pred             hhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence            35567789999999999999999999999999999999999999999999887665    4444445543

Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=95.50  E-value=1.9  Score=40.90  Aligned_cols=234  Identities=15%  Similarity=0.156  Sum_probs=126.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHh-hcccHHHHHHHHHHhcc-------ccchHHHHHHHHHhhhceEEE
Q 047775          137 IATIGFYIAPIWFVTEYFSNAALARTSVASTTVL-SSTSGLFTLFIGAFMGQ-------DTLNVAKVVAVLVSMAGVAMT  208 (386)
Q Consensus       137 ~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~lls~~~~~-------ek~~~~~~~~v~l~~~Gv~lv  208 (386)
                      .+....+.+++|.+....|-.+++|...+...-| ..+..++-.++-.++.+       .+-....++|++++++|+.++
T Consensus        72 ~l~~~~l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~  151 (344)
T PF06379_consen   72 TLFWTFLFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAIC  151 (344)
T ss_pred             HHHHHHHHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHH
Confidence            3444566777999999999999999988776554 34554554444334322       233456888999999999999


Q ss_pred             EecCCCCcccccccccCCCcchhhhHHHHHHHHHHHHHHHHHHHhc------CCCC-Ccch----HHHHHHHHHHHHHHH
Q 047775          209 TLGKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFC------GEEG-EKID----VQKLFGYIGLFTLVA  277 (386)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~------~~~~-~~~~----~~~~~~~~~~~~~~~  277 (386)
                      ...+..-+.+.+ +..++.+...|.+++++|.+..|.++.-...-.      .+++ ++..    ........|..+-..
T Consensus       152 g~AG~~Ke~~~~-~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~  230 (344)
T PF06379_consen  152 GKAGSMKEKELG-EEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLI  230 (344)
T ss_pred             hHHHHhhhhhhc-cchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHH
Confidence            876543211111 111334566899999999999999887663211      0001 1110    111111222222211


Q ss_pred             HHHHHHHHHhh--cCC--Cceec--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhH--HHH--HHhhhhHHHHHHH
Q 047775          278 LWWLVWPLTAL--GIE--PKFTI--PHSAKMEEVVLANGFVGSVLSDYFWALCVVWTTPL--VAT--LGMSLTIPLAMVA  347 (386)
Q Consensus       278 l~~~~~~~~~~--~~e--~~~~~--~~~~~~~~~i~~~~i~~s~l~~~l~~~~~~~~~~~--~~s--~~~~l~~p~a~i~  347 (386)
                       +.  ...+..  .+.  .+...  |.-.......+..|++ -...+++|.++-.+.++.  .++  +.+.+.+.++-+.
T Consensus       231 -yc--~~~l~~~k~~s~~~d~~~~~~~~~~N~~~~aLaG~l-Wy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvw  306 (344)
T PF06379_consen  231 -YC--LILLAKNKNWSWKGDYSVAKPPLLKNYLFCALAGVL-WYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVW  306 (344)
T ss_pred             -HH--HHHHhhcCCCccccccccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHH
Confidence             11  111111  010  00111  1001222233333443 456666777777777643  333  3334443336666


Q ss_pred             HHHHcCC------cchHHHHHHHHHHHHHHHHHhc
Q 047775          348 DMVIHGR------HYSAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       348 ~~i~~ge------~~~~~~~~G~~lIi~g~~l~~~  376 (386)
                      +.+ ++|      +.-..-++|.++++.++.++-+
T Consensus       307 Gl~-lkEWKg~s~kt~~vl~~G~~vlI~s~~ivG~  340 (344)
T PF06379_consen  307 GLI-LKEWKGASKKTIRVLVLGIAVLILSVVIVGY  340 (344)
T ss_pred             HHH-HHHhccCCcccHHHHHHHHHHHHHHHHHHhc
Confidence            665 454      3334668899999999887654

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=95.39  E-value=0.051  Score=43.04  Aligned_cols=61  Identities=16%  Similarity=0.230  Sum_probs=53.9

Q ss_pred             HHHHHHHHHHHhcccchhhHHHhh-cccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775          148 WFVTEYFSNAALARTSVASTTVLS-STSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT  208 (386)
Q Consensus       148 ~~~~~~~~~~al~~~~~~~~~~i~-~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv  208 (386)
                      .-.+...|++.+...+.+.+..+. ++.=++|.+.++++.+|..+++.++|+.+.+.|+.+.
T Consensus        51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc  112 (113)
T PF10639_consen   51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC  112 (113)
T ss_pred             HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence            344667889999999999999996 7788999999999988888999999999999999875

Many members are annotated as potential transmembrane proteins.

>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]

Probab=95.08  E-value=0.01  Score=53.50  Aligned_cols=137  Identities=14%  Similarity=0.158  Sum_probs=85.4

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHH
Q 047775          228 RSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVL  307 (386)
Q Consensus       228 ~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~  307 (386)
                      ...+|..+.-.+ ..+....++.+|....++...+..... ...+.+.+.       +.+. ..+ .--|...+.|+  +
T Consensus        35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~p~e~a~~r~l-~~mlit~pc-------liy~-~~~-v~gp~g~R~~L--i  101 (346)
T KOG4510|consen   35 KPNLGLLLLTVS-YFFNSCMVVSTKVLENDPMELASFRLL-VRMLITYPC-------LIYY-MQP-VIGPEGKRKWL--I  101 (346)
T ss_pred             CCccCceehhhH-HHHhhHHHhhhhhhccChhHhhhhhhh-hehhhhheE-------EEEE-eee-eecCCCcEEEE--E
Confidence            445677777777 777777778887765332222222211 111111111       1111 110 11233333442  2


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775          308 ANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD  378 (386)
Q Consensus       308 ~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~  378 (386)
                      .=|+. +..+..+.+++.++.+-+.++++....+.++++++|++++|++|..+.+|..+-+.|+++..++.
T Consensus       102 LRg~m-G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp  171 (346)
T KOG4510|consen  102 LRGFM-GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP  171 (346)
T ss_pred             eehhh-hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence            23333 34455667778899999999998888844499999999999999999999999999999987763

>KOG2765 consensus Predicted membrane protein [Function unknown]

Probab=94.97  E-value=0.056  Score=51.26  Aligned_cols=147  Identities=12%  Similarity=0.159  Sum_probs=103.8

Q ss_pred             hhhHHHHHHHHHHHHHHHhhHHHHHHHHhcC----CCcEEeeeecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhh
Q 047775            3 WRYRAGLFLISAVVIIWVTSAEVTQDIFSDY----KQPFAVTYLGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETL   78 (386)
Q Consensus         3 ~~~~~g~~~~l~~~~~w~~~~~~~~~~~~~~----~~P~~~~~~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (386)
                      .|..+|-++.++.+++++.-..+.|+-..+.    +-|.|+-|+...-+.+++|..++..    .. ++++         
T Consensus       243 ~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~----~~-~~e~---------  308 (416)
T KOG2765|consen  243 SRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILD----FF-GEER---------  308 (416)
T ss_pred             cchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHH----Hh-ccCc---------
Confidence            3567899999999999999999998877754    3455555555555566676544421    11 1111         


Q ss_pred             hccccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047775           79 NETSAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAA  158 (386)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  158 (386)
                                                    .+.       |+.          .....++..++   +.-+++.++|-+|
T Consensus       309 ------------------------------F~l-------P~~----------~q~~~vv~~~l---igtvvSDylW~~a  338 (416)
T KOG2765|consen  309 ------------------------------FEL-------PSS----------TQFSLVVFNNL---IGTVVSDYLWAKA  338 (416)
T ss_pred             ------------------------------ccC-------CCC----------ceeEeeeHhhH---HHHHHHHHHHHHH
Confidence                                          000       000          00112223333   3445789999999


Q ss_pred             hcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecCC
Q 047775          159 LARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGKT  213 (386)
Q Consensus       159 l~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~~  213 (386)
                      .-.|++-.+++-.+++.-..++.-.++.++++++..++|.+..++|-+++...+.
T Consensus       339 ~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~  393 (416)
T KOG2765|consen  339 VLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE  393 (416)
T ss_pred             HHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence            9999999999999988888889999999999999999999999999999887664

>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=94.70  E-value=1.2  Score=37.23  Aligned_cols=139  Identities=17%  Similarity=0.106  Sum_probs=71.4

Q ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHH
Q 047775          230 LVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLAN  309 (386)
Q Consensus       230 ~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~  309 (386)
                      .+..++++++.++-.++.-+..++.+.-+++..........|...+..+.     .... -++.+..-.+. -|+.. .-
T Consensus         4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~-----l~~~-~~~~~a~~~~~-pwW~~-~G   75 (150)
T COG3238           4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILL-----LIKQ-GHPGLAAVASA-PWWAW-IG   75 (150)
T ss_pred             HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHH-----HHhc-CCCchhhccCC-chHHH-Hc
Confidence            45678889999999999988888776433333222233333433333221     1111 11112210111 12221 12


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhHHH-HHHhhhhHHHHHHHHHHHcC----CcchHHHHHHHHHHHHHHHHHhcc
Q 047775          310 GFVGSVLSDYFWALCVVWTTPLVA-TLGMSLTIPLAMVADMVIHG----RHYSAIYILGSAQVFAGFVIVNVS  377 (386)
Q Consensus       310 ~i~~s~l~~~l~~~~~~~~~~~~~-s~~~~l~~p~a~i~~~i~~g----e~~~~~~~~G~~lIi~g~~l~~~~  377 (386)
                      |+++ ++--..-.....+.+++.. .....=+...++++|-+=+.    .+++...++|.+++++|+++.++.
T Consensus        76 G~lG-a~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~  147 (150)
T COG3238          76 GLLG-AIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF  147 (150)
T ss_pred             cchh-hhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence            2332 2222222334455554433 33333342337777766554    578999999999999996665543

>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family

Probab=93.96  E-value=1.5  Score=41.57  Aligned_cols=141  Identities=18%  Similarity=0.253  Sum_probs=85.0

Q ss_pred             cchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcee--cCCChhHHHH
Q 047775          228 RSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFT--IPHSAKMEEV  305 (386)
Q Consensus       228 ~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~--~~~~~~~~~~  305 (386)
                      ....|.++..+++++.+.+.+=.||..     +.++-.+....++++.++ .|.......  .++.++  -..+...+..
T Consensus         4 ~ii~Gii~h~iGg~~~~sfy~P~kkvk-----~WsWEs~Wlv~gi~swli-~P~~~a~l~--ip~~~~i~~~~~~~~l~~   75 (344)
T PF06379_consen    4 AIILGIIFHAIGGFASGSFYVPFKKVK-----GWSWESYWLVQGIFSWLI-VPWLWALLA--IPDFFSIYSATPASTLFW   75 (344)
T ss_pred             hHHHHHHHHHHHHHHhhhhccchhhcC-----CccHHHHHHHHHHHHHHH-HHHHHHHHh--CCcHHHHHHhCChhHHHH
Confidence            467899999999999999999999863     344544444456666654 333221111  221111  1112233444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhhH-HHHHHhhhhHHHHHHHHHHHcCC-------cchHHHHHHHHHHHHHHHHHhcc
Q 047775          306 VLANGFVGSVLSDYFWALCVVWTTPL-VATLGMSLTIPLAMVADMVIHGR-------HYSAIYILGSAQVFAGFVIVNVS  377 (386)
Q Consensus       306 i~~~~i~~s~l~~~l~~~~~~~~~~~-~~s~~~~l~~p~a~i~~~i~~ge-------~~~~~~~~G~~lIi~g~~l~~~~  377 (386)
                      ....|++ -.++-..|-.++|+++-+ -.++..-+...++.++--++.|+       +-....++|.++.++|+.+..+.
T Consensus        76 ~~l~G~l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A  154 (344)
T PF06379_consen   76 TFLFGVL-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA  154 (344)
T ss_pred             HHHHHHH-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH
Confidence            4555554 567777788889988843 44444444444455554444432       22457889999999999988653

This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane

>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]

Probab=93.25  E-value=0.03  Score=50.04  Aligned_cols=132  Identities=14%  Similarity=0.126  Sum_probs=84.8

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHHHHHHHHH
Q 047775          232 GDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGF  311 (386)
Q Consensus       232 G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~i  311 (386)
                      +.+++++=++.|+..-....|.-.+   +.  .+..+.  .++.++..   +.+... ..+    ..+...+..-...|.
T Consensus         3 ~~liaL~P~l~WGsip~v~~k~GG~---p~--qQ~lGt--T~GALifa---iiv~~~-~~p----~~T~~~~iv~~isG~   67 (288)
T COG4975           3 DLLIALLPALGWGSIPLVANKFGGK---PY--QQTLGT--TLGALIFA---IIVFLF-VSP----ELTLTIFIVGFISGA   67 (288)
T ss_pred             hHHHHHHHHHHhcccceeeeecCCC---hh--Hhhhhc--cHHHHHHH---HHHhee-ecC----ccchhhHHHHHHhhh
Confidence            4678889999999988888776542   22  222221  11111100   111111 111    123344554555566


Q ss_pred             HHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHH-HHHHHHHHcCCcchHHHH----HHHHHHHHHHHHHhccch
Q 047775          312 VGSVLSDYFWALCVVWTTPLVATLGMSLTIPL-AMVADMVIHGRHYSAIYI----LGSAQVFAGFVIVNVSDR  379 (386)
Q Consensus       312 ~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~-a~i~~~i~~ge~~~~~~~----~G~~lIi~g~~l~~~~~~  379 (386)
                      + -.+++..++++++..+.+++....+=.=-+ +.+++++.+||..+..++    +..+++++|+++..+.+|
T Consensus        68 ~-Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~  139 (288)
T COG4975          68 F-WSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR  139 (288)
T ss_pred             H-hhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence            5 778999999999999988887666533244 899999999999987554    467889999999887765

>TIGR00803 nst UDP-galactose transporter

Probab=92.81  E-value=0.15  Score=45.79  Aligned_cols=58  Identities=2%  Similarity=0.027  Sum_probs=52.9

Q ss_pred             HHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEE
Q 047775          150 VTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAM  207 (386)
Q Consensus       150 ~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~l  207 (386)
                      ..+.+..+.++|.++...++...+.++++.+++.++++|+++..+++|+.+.+.|+.+
T Consensus       164 ~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l  221 (222)
T TIGR00803       164 GGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL  221 (222)
T ss_pred             hcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence            3455678889999999999999999999999999999999999999999999999764

NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.

>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]

Probab=92.07  E-value=0.13  Score=48.45  Aligned_cols=64  Identities=11%  Similarity=0.197  Sum_probs=57.8

Q ss_pred             HHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEE
Q 047775          146 PIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTT  209 (386)
Q Consensus       146 ~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~  209 (386)
                      ++.+..|...|..+..++|-+-++....--+++.+.|+++++++.++.+..|..+++.|+++-.
T Consensus       243 v~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~  306 (316)
T KOG1441|consen  243 VLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS  306 (316)
T ss_pred             HHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence            5677889999999999999999999988888888999999999999999999999999987654

>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins

Probab=91.84  E-value=1  Score=37.24  Aligned_cols=55  Identities=22%  Similarity=0.364  Sum_probs=41.2

Q ss_pred             HHHHHHhcccchhhHHHhhcccHHHH-HHHHHH----hccccchHHHHHHHHHhhhceEE
Q 047775          153 YFSNAALARTSVASTTVLSSTSGLFT-LFIGAF----MGQDTLNVAKVVAVLVSMAGVAM  207 (386)
Q Consensus       153 ~~~~~al~~~~~~~~~~i~~~~p~~~-~lls~~----~~~ek~~~~~~~~v~l~~~Gv~l  207 (386)
                      .+..+..+...++.++.+.-+.-+.. .++-.+    ..|+++++.|++|+++.++|+.+
T Consensus        79 ~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L  138 (138)
T PF04657_consen   79 LSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL  138 (138)
T ss_pred             HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence            34477889999998888876554444 444443    36889999999999999999864

>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function

Probab=90.95  E-value=0.48  Score=37.54  Aligned_cols=59  Identities=17%  Similarity=0.119  Sum_probs=44.3

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHH-hhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHH
Q 047775          315 VLSDYFWALCVVWTTPLVATLG-MSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVI  373 (386)
Q Consensus       315 ~l~~~l~~~~~~~~~~~~~s~~-~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l  373 (386)
                      ..+-..|++.+.+.+-+.+... +++...++++.++++.+|..+...++|+++|+.|+.+
T Consensus        52 q~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L  111 (113)
T PF10639_consen   52 QSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL  111 (113)
T ss_pred             HHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence            3344556667777775555555 4677556999999888888899999999999999764

Many members are annotated as potential transmembrane proteins.

>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]

Probab=90.86  E-value=0.2  Score=43.34  Aligned_cols=65  Identities=14%  Similarity=0.312  Sum_probs=57.2

Q ss_pred             HHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccch
Q 047775          315 VLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSDR  379 (386)
Q Consensus       315 ~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~~  379 (386)
                      ..+.++|..++++.+|+.++-.....-.+..+++++.+|+++....++.+++-+.|+++..+.+.
T Consensus        64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN  128 (290)
T KOG4314|consen   64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADN  128 (290)
T ss_pred             ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccc
Confidence            34678889999999999999888888777999999999999999999999999999988776543

>KOG2922 consensus Uncharacterized conserved protein [Function unknown]

Probab=87.90  E-value=0.22  Score=46.45  Aligned_cols=122  Identities=16%  Similarity=0.147  Sum_probs=78.4

Q ss_pred             CCCcchhhhHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCceecCCChhHHH
Q 047775          225 NGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEE  304 (386)
Q Consensus       225 ~~~~~~~G~~l~l~aa~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~  304 (386)
                      ...++..|..+++.+.+..+...++.||-..+...       .   +             .-.  .|.....-..+..|.
T Consensus        15 ~~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~-------~---~-------------~ra--~~gg~~yl~~~~Ww~   69 (335)
T KOG2922|consen   15 MSSDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA-------S---G-------------LRA--GEGGYGYLKEPLWWA   69 (335)
T ss_pred             hccCceeeeeehhhccEEEeeehhhhHHHHHHHhh-------h---c-------------ccc--cCCCcchhhhHHHHH
Confidence            45567889999999999999999988886543100       0   0             011  111111111111222


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhc
Q 047775          305 VVLANGFVGSVLSDYFWALCVVWTTPLVATLGMSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNV  376 (386)
Q Consensus       305 ~i~~~~i~~s~l~~~l~~~~~~~~~~~~~s~~~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~  376 (386)
                      .++..++ +-+..|..|.+    .+++.++....+.++.+++++..+++|+++....+|+++.++|-.+...
T Consensus        70 G~ltm~v-Gei~NFaAYaF----APasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~  136 (335)
T KOG2922|consen   70 GMLTMIV-GEIANFAAYAF----APASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVI  136 (335)
T ss_pred             HHHHHHH-HhHhhHHHHhh----chHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEE
Confidence            2332222 34444444444    4677778778888777999999999999999999999999999665543

>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]

Probab=84.29  E-value=1.9  Score=38.52  Aligned_cols=64  Identities=9%  Similarity=0.267  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775          149 FVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK  212 (386)
Q Consensus       149 ~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~  212 (386)
                      .+.|++.|.-+.+-++-.-+++..+--+||.+.|++++...++.+||+|..+.+.|...=+..+
T Consensus       252 ~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G  315 (337)
T KOG1580|consen  252 CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG  315 (337)
T ss_pred             HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence            3578888888888889899999999999999999999999999999999999999876644333

>KOG1443 consensus Predicted integral membrane protein [Function unknown]

Probab=82.63  E-value=19  Score=33.75  Aligned_cols=145  Identities=18%  Similarity=0.276  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHhc----CCCcEEeee-ecchhHHHHHHHHHHHHHHHHHhhhccccccchhhhhhcc
Q 047775            7 AGLFLISAVVIIWVTSAEVTQDIFSD----YKQPFAVTY-LGASLMVVYLPVAFLKDWFCNLLKRRSSKSVKDAETLNET   81 (386)
Q Consensus         7 ~g~~~~l~~~~~w~~~~~~~~~~~~~----~~~P~~~~~-~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (386)
                      .|..++..+.++-|.--..+|.+..+    -..|+-..+ .+..++..++|..+.       ++.......         
T Consensus       164 ~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~-------fEG~~~~~~---------  227 (349)
T KOG1443|consen  164 EGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLL-------FEGLHLITS---------  227 (349)
T ss_pred             hhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHH-------Hcccccchh---------
Confidence            57888888888888878889998875    346875554 444444455665443       122111000         


Q ss_pred             ccccCCCccccchhhhhhccccccCCcccCCCcccCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047775           82 SAALNSPMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHKEPTTREIATIGFYIAPIWFVTEYFSNAALAR  161 (386)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~  161 (386)
                                                ++..+..+              ....++.+..+++. +..-|+....-+.=+..
T Consensus       228 --------------------------s~~f~~~d--------------~~~~~rv~g~i~l~-g~laF~l~~sEflLl~~  266 (349)
T KOG1443|consen  228 --------------------------SSIFRFQD--------------TGLILRVIGLISLG-GLLAFLLEFSEFLLLSR  266 (349)
T ss_pred             --------------------------hhHHHhcC--------------ccHHHHHHHHHHHH-HHHHHHHHHHHHheeee
Confidence                                      00000000              00123333333333 33333444455666777


Q ss_pred             cchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEE
Q 047775          162 TSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMT  208 (386)
Q Consensus       162 ~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv  208 (386)
                      |+.-..++..----+.+.+++.++++++++...|.|..++..|+.+=
T Consensus       267 Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~  313 (349)
T KOG1443|consen  267 TSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH  313 (349)
T ss_pred             ccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence            77777777766778889999999999999999999999999998876

>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]

Probab=80.72  E-value=42  Score=31.60  Aligned_cols=71  Identities=20%  Similarity=0.305  Sum_probs=59.0

Q ss_pred             HHHHHHHHHHHHHHHHHhcccchhhHHHhhcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775          142 FYIAPIWFVTEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK  212 (386)
Q Consensus       142 ~~~~~~~~~~~~~~~~al~~~~~~~~~~i~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~  212 (386)
                      .+.|++-+.-+++-++..+.+++...++.....-..+.+-..++.++++++..++|+.+++.|-++-.+..
T Consensus       232 ~lScv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~  302 (314)
T KOG1444|consen  232 LLSCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYAT  302 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhh
Confidence            33444556778889999999999999999977788888888888999999999999999999977765543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	386
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.3 bits (127), Expect = 8e-08
 Identities = 56/363 (15%), Positives = 101/363 (27%), Gaps = 96/363 (26%)

Query: 46  LMVVYLPVAFLKDWFCNLLKRRSSKSVKDAE----TLNETSAALNSPMR----HRVFEME 97
           ++ V+   AF+ ++ C        K V+D      +  E    + S        R+F   
Sbjct: 21  ILSVFED-AFVDNFDC--------KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLF--- 68

Query: 98  LQGTFNKKDSELDLSSSEEGMP-----LVSKLKDDAHKEPTTREIATIGF--YIAPIWFV 150
              T   K  E+     EE +      L+S +      E     + T  +      ++  
Sbjct: 69  --WTLLSKQEEMVQKFVEEVLRINYKFLMSPI----KTEQRQPSMMTRMYIEQRDRLYND 122

Query: 151 TEYFSNAALARTSVASTTVLSSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTL 210
            + F+   ++R        L     L  L       +   NV     ++  + G      
Sbjct: 123 NQVFAKYNVSRLQ----PYLKLRQALLEL-------RPAKNV-----LIDGVLGS----- 161

Query: 211 GKTWAADESQFSAANGKRSLVGDLFGLLSAMSYGLFTVLLKKFCGEEGEKIDVQKLFGYI 270
           GKTW        A +   S     + +   M + +F + LK  C      +++       
Sbjct: 162 GKTWV-------ALDVCLS-----YKVQCKMDFKIFWLNLKN-CNSPETVLEM------- 201

Query: 271 GLFTLVALWWLVWPLTALGIEPKFTIPHSAKMEEVVLANGFVGSVLSDYFWALCV---VW 327
               L  L + + P      +    I       +  L           Y   L V   V 
Sbjct: 202 ----LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL---KSKPYENCLLVLLNVQ 254

Query: 328 TTPLVATLGMS----LTIPLAMVADMVI--HGRHYSAIYILG------SAQVFAGFVIVN 375
                    +S    LT     V D +      H S  +            +   ++   
Sbjct: 255 NAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCR 314

Query: 376 VSD 378
             D
Sbjct: 315 PQD 317

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 3e-05
 Identities = 45/392 (11%), Positives = 99/392 (25%), Gaps = 124/392 (31%)

Query: 19  WVTSAEVTQDIFSDYKQPFAVTYLG-------ASLMV----------------------V 49
              + +V        K  F + +L         +++                       +
Sbjct: 164 TWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 50  YLPVAFLKDWFCNLLKRRSSKS-------VKDAETLN---------------ETSAALNS 87
            L +  ++     LLK +  ++       V++A+  N               + +  L++
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSA 283

Query: 88  PMRHRVFEMELQGTFNKKDSELDLSSSEEGMPLVSKLKDDAHK-EPTTREIATIGFYIAP 146
                +       T    +    L            L  +     P  R ++ I   I  
Sbjct: 284 ATTTHISLDHHSMTLTPDEV-KSLLLKYLDCR-PQDLPREVLTTNP--RRLSIIAESIRD 339

Query: 147 ---IWFVTEYFSNAALARTSVASTTVLSST--SGLFT-LFIGAFMGQDTLNV-AKVVAVL 199
               W   ++ +   L     +S  VL       +F  L +  F    + ++   +++++
Sbjct: 340 GLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV--F--PPSAHIPTILLSLI 395

Query: 200 VSMAGVAMTTLGKTWAADESQ--FSAANG--KRSLVG-----------DLFGLLSAMSYG 244
                         W            N   K SLV             ++  L      
Sbjct: 396 --------------WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN 441

Query: 245 LFTV---------LLKKFCGEEGEKIDVQKLFGYIGLFTLVALWWLVWPLTALGIEPKFT 295
            + +         + K F     + +    L  Y           +   L  +    + T
Sbjct: 442 EYALHRSIVDHYNIPKTFD---SDDLIPPYLDQYF-------YSHIGHHLKNIEHPERMT 491

Query: 296 I-PH--------SAKMEEVVLANGFVGSVLSD 318
           +             K+     A    GS+L+ 
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTAWNASGSILNT 523

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	386
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.61
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.38
3b5d_A	110	Multidrug transporter EMRE; helical membrane prote	98.18
2i68_A	137	Protein EMRE; transmembrane protein, small-multidr	98.11

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.61  E-value=6.3e-08  Score=78.74  Aligned_cols=70  Identities=17%  Similarity=0.190  Sum_probs=51.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHH-hhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775          309 NGFVGSVLSDYFWALCVVWTTPLVATLG-MSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD  378 (386)
Q Consensus       309 ~~i~~s~l~~~l~~~~~~~~~~~~~s~~-~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~  378 (386)
                      .+++++++++++|.+++++.++..+... ..+.+.++++++++++||++++.+++|.++|++|++++++.+
T Consensus        35 l~i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            5566789999999999999999999888 788844499999999999999999999999999999998754

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.38  E-value=1.6e-06  Score=67.86  Aligned_cols=70  Identities=17%  Similarity=0.190  Sum_probs=61.3

Q ss_pred             HHHHHHHHHHHHHHHHHHhhhhHHHHHH-hhhhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhccc
Q 047775          309 NGFVGSVLSDYFWALCVVWTTPLVATLG-MSLTIPLAMVADMVIHGRHYSAIYILGSAQVFAGFVIVNVSD  378 (386)
Q Consensus       309 ~~i~~s~l~~~l~~~~~~~~~~~~~s~~-~~l~~p~a~i~~~i~~ge~~~~~~~~G~~lIi~g~~l~~~~~  378 (386)
                      .++++..+++.++.+++++.+...+... ..+.+.++++++++++||+++..+++|.++|+.|+++.+..+
T Consensus        35 ~~~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            4455688999999999999999988777 678833499999999999999999999999999999998765

>3b5d_A Multidrug transporter EMRE; helical membrane protein, multidrug resistance transporter, SMR, antiport, inner membrane, transmembrane; HET: P4P; 3.80A {Escherichia coli K12} PDB: 3b61_A 3b62_A*

Probab=98.18  E-value=1.8e-06  Score=67.53  Aligned_cols=68  Identities=12%  Similarity=0.143  Sum_probs=61.0

Q ss_pred             HHHHHHHHHHHHHHhcccchhhHHHh-hcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775          145 APIWFVTEYFSNAALARTSVASTTVL-SSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK  212 (386)
Q Consensus       145 ~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~  212 (386)
                      ...+..+.+++..++++.+.+.+..+ .++.|+++.++++++++|++++.|++|+.+.++|++++...+
T Consensus        37 ~~~~~~~~~~~~~al~~~p~s~ay~i~~g~~~v~~~l~~~~~~~E~~s~~~~~Gi~lIi~Gv~~l~~~~  105 (110)
T 3b5d_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (110)
T ss_pred             HHHHHHHHHHHHHHHHhCChhhHHHHHhhHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33556677889999999999999988 799999999999999999999999999999999999886543

>2i68_A Protein EMRE; transmembrane protein, small-multidrug resistance, transporter, homodimer, dual topology, transport protein; NMR {Escherichia coli}

Probab=98.11  E-value=1.3e-06  Score=70.98  Aligned_cols=68  Identities=12%  Similarity=0.143  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHHHHHhcccchhhHHHh-hcccHHHHHHHHHHhccccchHHHHHHHHHhhhceEEEEecC
Q 047775          145 APIWFVTEYFSNAALARTSVASTTVL-SSTSGLFTLFIGAFMGQDTLNVAKVVAVLVSMAGVAMTTLGK  212 (386)
Q Consensus       145 ~~~~~~~~~~~~~al~~~~~~~~~~i-~~~~p~~~~lls~~~~~ek~~~~~~~~v~l~~~Gv~lv~~~~  212 (386)
                      .+.+.++.++++.++++.+++.+..+ .++.|+++.++++++++|++++.+++|+++.++|++++...+
T Consensus        37 i~~~~ls~~l~~~alk~i~~s~ay~iw~~l~pv~~~l~g~l~lgE~ls~~~~~Gi~LIi~GV~ll~~~~  105 (137)
T 2i68_A           37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLIINLLS  105 (137)
T ss_dssp             HHHHHHHHHHHHHHHC-----CHHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence            33556778899999999999999998 899999999999999999999999999999999999987543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00