Citrus Sinensis ID: 047808

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-
Protein Sequence
MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSCSNEIADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSAPSPGGLVVIYQPQVFKVLG
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHccccHHHHHHHHHHHccccHHHHHccHHHHHHHHHHHHccHHHHHHccccccccHHHHHcccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
cccHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHHccHHHHcccHHHHHHHEHccccHHHHHHHccccHHHHHHHcccccccccccccccccccccEEEEEcc
Coil and Loop (DISEMBL)
MALNHVFFILALTCLIMANIAnatsmndclnnnikpgydLATRLEASGGLTKCWNALMELKSCsneiadigpdccrAIDIITRNCWSAMLTSlgftaeegnilrgycdafsapspgglvviyqpqvfkvlg
Flexible Loop (DISEMBL)
MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSCSNEIADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSAPSPGGLVVIYQPQVFKVLG
Low Complexity Region (SEG)
MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSCSNEIADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSAPSPGGLVVIYQPQVFKVLG
Disordered region (IsUnstruct)
**LNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSCSNEIADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSAPSPGGLVVIYQPQVFKV**
Disordered Region (DISOPRED)
****HVFFILALTCLIMANIAN****************************TKCWNALMELKSCSNEIADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDA***********IYQPQVFKVLG
Disordered Region (DISEMBL)
MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSCSNEIADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSAPSPGGLVVIYQPQVFKVLG
Disordered Region (DISPRO)
**LNHVFFILALTCLIMANIANAT**************DLATRLEASGGLTKCWNALMELKSCSNEIADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSAPSPGGLVVIYQPQVFKVLG
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSCSNEIADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSAPSPGGLVVIYQPQVFKVLG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	131	2.2.26 [Sep-21-2011]
Q9T039	127	Egg cell-secreted protein	yes	no	0.839	0.866	0.472	2e-21
Q9SJ24	125	Egg cell-secreted protein	no	no	0.778	0.816	0.435	1e-19
Q9SJ23	125	Egg cell-secreted protein	no	no	0.816	0.856	0.44	2e-19
Q9SRD8	158	Egg cell-secreted protein	no	no	0.793	0.658	0.357	1e-14
Q9FGG1	155	Egg cell-secreted protein	no	no	0.641	0.541	0.401	2e-13

>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2 SV=1

 Score =  100 bits (249), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/129 (47%), Positives = 76/129 (58%), Gaps = 19/129 (14%)

Query: 1   MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
           MA N  F    +T LI+  + N T     L    +   ++A RL+ SGGL +CWNAL EL
Sbjct: 1   MASNTTFLFSTVTLLII--LLNTTVSGRDLP--AESSTNIAARLQ-SGGLMECWNALYEL 55

Query: 61  KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYC----- 107
           KSC+NEI          +G  CC ++DIIT NCW AMLTSLGFT EE N+LRG+C     
Sbjct: 56  KSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLRGFCQNPNS 115

Query: 108 -DAFSAPSP 115
            D+  APSP
Sbjct: 116 GDSSPAPSP 124

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2 SV=1

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 15/117 (12%)

Query: 1   MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
           MA N  F    +  L++ NI+  T          +   ++A RL   GGL +CWNAL EL
Sbjct: 1   MASNTSFLFATIAILLVLNISGRTL------PETEDSTNIAARLNG-GGLMECWNALYEL 53

Query: 61  KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDA 109
           KSC+NEI          +G DCC+A+++IT +CW AMLTSLGFT++E N+LRG+C +
Sbjct: 54  KSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQS 110

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2 SV=1

 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/125 (44%), Positives = 74/125 (59%), Gaps = 18/125 (14%)

Query: 1   MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
           MA N  F  + +T L++ N+++        + NI      A RL   GGL +CW+AL EL
Sbjct: 1   MASNTSFLFVTVTLLLVLNVSSRALPPVADSTNI------AARLTG-GGLMQCWDALYEL 53

Query: 61  KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSA 112
           KSC+NEI          +G  CC A+D+IT +CW AMLTSLGFT EE N+LRG+C    +
Sbjct: 54  KSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQ---S 110

Query: 113 PSPGG 117
           P+ GG
Sbjct: 111 PNSGG 115

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 8/112 (7%)

Query: 6   VFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSCSN 65
            F I+ L  ++ ++   A  +         P   L  RL+       CW++LM+L+ CS 
Sbjct: 10  TFNIVTLMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSG 69

Query: 66  EI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDA 109
           E+          IGP CC AI  I R CW  M+  LGFTA+EG++L+GYCD 
Sbjct: 70  ELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCDG 121

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2 SV=1

 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 54/107 (50%), Gaps = 23/107 (21%)

Query: 40  LATRLEASGGLTKCWNALMELKSCSNEIAD----------------IGPDCCRAIDIITR 83
           +AT    +G L  CWNA +ELKSC++EI                  I  DCC AI ++ +
Sbjct: 40  MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99

Query: 84  NCWSAMLTSLGFTAEEGNILRGYCDAFSA------PSPGGLVVIYQP 124
           +CWS M TSLG T  EGN LR YC+ F A      PSP    +   P
Sbjct: 100 DCWSVMFTSLGLTTMEGNNLREYCE-FQAEKSELSPSPAPETLALSP 145

Involved in the regulation of gamete interactions during the double fertilization and to prevent multiple-pollen tube attraction; mediates the redistribution of the gamete fusogen HAP2/GCS1 to the cell surface after secretion upon sperm arrival.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
359482498	128	PREDICTED: uncharacterized protein LOC10	0.885	0.906	0.557	2e-30
296082551	135	unnamed protein product [Vitis vinifera]	0.793	0.770	0.610	1e-29
224060465	146	predicted protein [Populus trichocarpa]	0.778	0.698	0.555	2e-26
255578404	136	conserved hypothetical protein [Ricinus	0.816	0.786	0.516	9e-22
116830619	128	unknown [Arabidopsis thaliana]	0.839	0.859	0.472	2e-19
15235039	127	uncharacterized protein [Arabidopsis tha	0.839	0.866	0.472	2e-19
297825031	125	hypothetical protein ARALYDRAFT_900605 [	0.816	0.856	0.448	2e-18
297802032	127	hypothetical protein ARALYDRAFT_490711 [	0.770	0.795	0.451	3e-18
15227092	125	uncharacterized protein [Arabidopsis tha	0.778	0.816	0.435	8e-18
255578398	135	conserved hypothetical protein [Ricinus	0.748	0.725	0.470	9e-18

>gi|359482498|ref|XP_002274398.2| PREDICTED: uncharacterized protein LOC100260034 [Vitis vinifera] gi|147772490|emb|CAN65099.1| hypothetical protein VITISV_039724 [Vitis vinifera] gi|297743029|emb|CBI35896.3| unnamed protein product [Vitis vinifera]

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 73/131 (55%), Positives = 88/131 (67%), Gaps = 15/131 (11%)

Query: 1   MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
           MAL  +F ++ALT L+    ANA +  D   N   PG DL TRLE SGGL +CWNALME+
Sbjct: 1   MALKTLFLLVALTWLM----ANAAATRDLPTN---PGLDLTTRLETSGGLVECWNALMEI 53

Query: 61  KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSA 112
           + C+NEI          +GP+CC+AI IITRNCW AMLTSLGFTAEEGNIL+GYC+A S 
Sbjct: 54  RQCTNEIILFFLNGQTVLGPECCQAISIITRNCWPAMLTSLGFTAEEGNILQGYCNASSG 113

Query: 113 PSPGGLVVIYQ 123
           P       +YQ
Sbjct: 114 PPTPASPPLYQ 124

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082551|emb|CBI21556.3| unnamed protein product [Vitis vinifera]

 Score =  134 bits (337), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 72/118 (61%), Positives = 87/118 (73%), Gaps = 14/118 (11%)

Query: 3   LNHVFFILALTCLIMANIANATSMNDCLNNNIKPG-YDLATRLEASGGLTKCWNALMELK 61
           + +VF ++AL+ LI     NA++  + L  ++KP   DL  RLE SGGL +CWNAL+ELK
Sbjct: 4   IKNVFLLVALSWLI----TNASASRE-LPMSMKPAELDLVARLETSGGLVECWNALVELK 58

Query: 62  SCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFS 111
           SC+NEI        ADIGPDCC AIDIITRNCW  MLTSLGFTAEEGNILRGYCDA++
Sbjct: 59  SCTNEIILFFLNGQADIGPDCCGAIDIITRNCWPTMLTSLGFTAEEGNILRGYCDAYT 116

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224060465|ref|XP_002300213.1| predicted protein [Populus trichocarpa] gi|222847471|gb|EEE85018.1| predicted protein [Populus trichocarpa]

 Score =  123 bits (309), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/126 (55%), Positives = 80/126 (63%), Gaps = 24/126 (19%)

Query: 23  ATSMNDCLNNNIKPGYD-LATRLEASGGLTKCWNALMELKSCSNEI--------ADIGPD 73
           +T+  D L N  KPG++ L+ RLE  G L +CWNAL+E+KSC+NEI        ADIGPD
Sbjct: 22  STAARDILIN--KPGFNSLSARLEDEGSLVECWNALVEIKSCTNEIVLFFMTGQADIGPD 79

Query: 74  CCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDA-----------FSAPSP--GGLVV 120
           CCRAI  IT NCW AM TSLGFT EEGNILRGYCDA            SAPSP   G   
Sbjct: 80  CCRAIHTITHNCWPAMFTSLGFTDEEGNILRGYCDASPNSPSIYFSPASAPSPLAAGAPA 139

Query: 121 IYQPQV 126
            YQP +
Sbjct: 140 QYQPML 145

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578404|ref|XP_002530067.1| conserved hypothetical protein [Ricinus communis] gi|223530420|gb|EEF32307.1| conserved hypothetical protein [Ricinus communis]

 Score =  108 bits (269), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 64/124 (51%), Positives = 76/124 (61%), Gaps = 17/124 (13%)

Query: 1   MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLE--ASGGLTKCWNALM 58
           MA   +  +L LT +I    A+AT+  D        G  L  R+E  +S  L  CWNAL+
Sbjct: 1   MAFKIMTLLLGLTLVI----ASATAARDV---PFISGNSLEARIEGSSSSSLVDCWNALI 53

Query: 59  ELKSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAF 110
           E+KSCSNEI         DIG DCCR+I I T NCW AMLTS+GFTAEEGNILRGYCD  
Sbjct: 54  EIKSCSNEIILFFLNGHTDIGADCCRSIAIFTHNCWPAMLTSIGFTAEEGNILRGYCDNA 113

Query: 111 SAPS 114
           S+ S
Sbjct: 114 SSSS 117

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|116830619|gb|ABK28267.1| unknown [Arabidopsis thaliana]

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/129 (47%), Positives = 76/129 (58%), Gaps = 19/129 (14%)

Query: 1   MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
           MA N  F    +T LI+  + N T     L    +   ++A RL+ SGGL +CWNAL EL
Sbjct: 1   MASNTTFLFSTVTLLII--LLNTTVSGRDLP--AESSTNIAARLQ-SGGLMECWNALYEL 55

Query: 61  KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYC----- 107
           KSC+NEI          +G  CC ++DIIT NCW AMLTSLGFT EE N+LRG+C     
Sbjct: 56  KSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLRGFCQNPNS 115

Query: 108 -DAFSAPSP 115
            D+  APSP
Sbjct: 116 GDSSPAPSP 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15235039|ref|NP_195644.1| uncharacterized protein [Arabidopsis thaliana] gi|75213705|sp|Q9T039.1|EC14_ARATH RecName: Full=Egg cell-secreted protein 1.4; Flags: Precursor gi|4914446|emb|CAB43649.1| hypothetical protein [Arabidopsis thaliana] gi|7270918|emb|CAB80597.1| hypothetical protein [Arabidopsis thaliana] gi|91805627|gb|ABE65542.1| hypothetical protein At4g39340 [Arabidopsis thaliana] gi|332661658|gb|AEE87058.1| uncharacterized protein [Arabidopsis thaliana]

 Score =  100 bits (249), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/129 (47%), Positives = 76/129 (58%), Gaps = 19/129 (14%)

Query: 1   MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
           MA N  F    +T LI+  + N T     L    +   ++A RL+ SGGL +CWNAL EL
Sbjct: 1   MASNTTFLFSTVTLLII--LLNTTVSGRDLP--AESSTNIAARLQ-SGGLMECWNALYEL 55

Query: 61  KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYC----- 107
           KSC+NEI          +G  CC ++DIIT NCW AMLTSLGFT EE N+LRG+C     
Sbjct: 56  KSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLRGFCQNPNS 115

Query: 108 -DAFSAPSP 115
            D+  APSP
Sbjct: 116 GDSSPAPSP 124

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825031|ref|XP_002880398.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata] gi|297326237|gb|EFH56657.1| hypothetical protein ARALYDRAFT_900605 [Arabidopsis lyrata subsp. lyrata]

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 56/125 (44%), Positives = 74/125 (59%), Gaps = 18/125 (14%)

Query: 1   MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
           MA N  F  + +T L+  N++  T      + NI      A RL   GGL +CW+AL EL
Sbjct: 1   MASNTSFLFVTVTLLLALNVSGRTLPVVADSTNI------AARLTG-GGLMQCWDALYEL 53

Query: 61  KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSA 112
           KSC+NEI          +G  CC A+D+IT +CW AMLTSLGFT+EE N+LRG+C    +
Sbjct: 54  KSCTNEIVLFFLNGETKLGSGCCNAVDVITTDCWPAMLTSLGFTSEETNVLRGFCQ---S 110

Query: 113 PSPGG 117
           P+ GG
Sbjct: 111 PTSGG 115

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297802032|ref|XP_002868900.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata] gi|297314736|gb|EFH45159.1| hypothetical protein ARALYDRAFT_490711 [Arabidopsis lyrata subsp. lyrata]

 Score = 96.7 bits (239), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 51/113 (45%), Positives = 67/113 (59%), Gaps = 12/113 (10%)

Query: 4   NHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSC 63
           +H  F+ +   L++  +    S  D      +   ++A RL+ SGGL +CWN L ELKSC
Sbjct: 3   SHTTFLFSTVTLLILFLNTTVSGRDL---PAESSTNIAARLQ-SGGLMECWNVLYELKSC 58

Query: 64  SNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCD 108
           +NEI          +G  CC A+DIIT NCW AMLTSLGFT EE N+LRG+C 
Sbjct: 59  TNEIVLFFLNGETKLGVSCCEAVDIITTNCWPAMLTSLGFTPEEANVLRGFCQ 111

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15227092|ref|NP_179766.1| uncharacterized protein [Arabidopsis thaliana] gi|75206217|sp|Q9SJ24.1|EC12_ARATH RecName: Full=Egg cell-secreted protein 1.2; Flags: Precursor gi|4417269|gb|AAD20394.1| hypothetical protein [Arabidopsis thaliana] gi|91805455|gb|ABE65456.1| hypothetical protein At2g21740 [Arabidopsis thaliana] gi|330252124|gb|AEC07218.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 95.1 bits (235), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 15/117 (12%)

Query: 1   MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
           MA N  F    +  L++ NI+  T          +   ++A RL   GGL +CWNAL EL
Sbjct: 1   MASNTSFLFATIAILLVLNISGRTL------PETEDSTNIAARLNG-GGLMECWNALYEL 53

Query: 61  KSCSNEI--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDA 109
           KSC+NEI          +G DCC+A+++IT +CW AMLTSLGFT++E N+LRG+C +
Sbjct: 54  KSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQS 110

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578398|ref|XP_002530064.1| conserved hypothetical protein [Ricinus communis] gi|223530417|gb|EEF32304.1| conserved hypothetical protein [Ricinus communis]

 Score = 95.1 bits (235), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/119 (47%), Positives = 67/119 (56%), Gaps = 21/119 (17%)

Query: 7   FFILALTCLIMANIANATSMNDCLNNNIKPGYD--------LATRLEASGGLTKCWNALM 58
           F +++L   +   IA A+++ +     IK  YD        L T   + GGL  CWNALM
Sbjct: 3   FKVMSLLLGVTFFIAGASAIREI---PIKQAYDNTETRVLLLETSSSSGGGLVDCWNALM 59

Query: 59  ELKSCSNEIA----------DIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYC 107
           E+KSCSNEI            IG DCC AI II  NCW +MLTSLGFT EE NIL GYC
Sbjct: 60  EIKSCSNEIILFFLNGQTDITIGADCCSAISIIAHNCWPSMLTSLGFTVEEVNILNGYC 118

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	131
TAIR|locus:2136293	127	EC1.4 "AT4G39340" [Arabidopsis	0.839	0.866	0.472	4.3e-22
TAIR|locus:2052536	125	EC1.2 "AT2G21740" [Arabidopsis	0.816	0.856	0.448	2.4e-21
TAIR|locus:2052556	125	EC1.3 "AT2G21750" [Arabidopsis	0.816	0.856	0.44	1.7e-20
TAIR|locus:2030136	158	EC1.1 "AT1G76750" [Arabidopsis	0.839	0.696	0.347	1.4e-14
TAIR|locus:2176080	155	EC1.5 "AT5G64720" [Arabidopsis	0.549	0.464	0.438	5.6e-13

TAIR|locus:2136293 EC1.4 "AT4G39340" [Arabidopsis thaliana (taxid:3702)]

 Score = 257 (95.5 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 61/129 (47%), Positives = 76/129 (58%)

Query:     1 MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
             MA N  F    +T LI+  + N T     L    +   ++A RL+ SGGL +CWNAL EL
Sbjct:     1 MASNTTFLFSTVTLLII--LLNTTVSGRDLP--AESSTNIAARLQ-SGGLMECWNALYEL 55

Query:    61 KSCSNEIA--------DIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYC----- 107
             KSC+NEI          +G  CC ++DIIT NCW AMLTSLGFT EE N+LRG+C     
Sbjct:    56 KSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLRGFCQNPNS 115

Query:   108 -DAFSAPSP 115
              D+  APSP
Sbjct:   116 GDSSPAPSP 124

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052536 EC1.2 "AT2G21740" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 2.4e-21, P = 2.4e-21
 Identities = 56/125 (44%), Positives = 75/125 (60%)

Query:     1 MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
             MA N  F    +  L++ NI+  T      + NI      A RL   GGL +CWNAL EL
Sbjct:     1 MASNTSFLFATIAILLVLNISGRTLPETEDSTNI------AARLNG-GGLMECWNALYEL 53

Query:    61 KSCSNEIA--------DIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSA 112
             KSC+NEI          +G DCC+A+++IT +CW AMLTSLGFT++E N+LRG+C +   
Sbjct:    54 KSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQS--- 110

Query:   113 PSPGG 117
             P+ GG
Sbjct:   111 PNSGG 115

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2052556 EC1.3 "AT2G21750" [Arabidopsis thaliana (taxid:3702)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 55/125 (44%), Positives = 74/125 (59%)

Query:     1 MALNHVFFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMEL 60
             MA N  F  + +T L++ N+++        + NI      A RL   GGL +CW+AL EL
Sbjct:     1 MASNTSFLFVTVTLLLVLNVSSRALPPVADSTNI------AARL-TGGGLMQCWDALYEL 53

Query:    61 KSCSNEIA--------DIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSA 112
             KSC+NEI          +G  CC A+D+IT +CW AMLTSLGFT EE N+LRG+C +   
Sbjct:    54 KSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQS--- 110

Query:   113 PSPGG 117
             P+ GG
Sbjct:   111 PNSGG 115

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2030136 EC1.1 "AT1G76750" [Arabidopsis thaliana (taxid:3702)]

 Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 41/118 (34%), Positives = 60/118 (50%)

Query:     7 FFILALTCLIMANIANATSMNDCLNNNIKPGYDLATRLEASGGLTKCWNALMELKSCSNE 66
             F I+ L  ++ ++   A  +         P   L  RL+       CW++LM+L+ CS E
Sbjct:    11 FNIVTLMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSGE 70

Query:    67 I--------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSAPSPG 116
             +          IGP CC AI  I R CW  M+  LGFTA+EG++L+GYCD   + + G
Sbjct:    71 LILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCDGNDSDNNG 128

GO:0003674 "molecular_function" evidence=ND

GO:0005576 "extracellular region" evidence=ISM;IDA

GO:0005622 "intracellular" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0048240 "sperm capacitation" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

TAIR|locus:2176080 EC1.5 "AT5G64720" [Arabidopsis thaliana (taxid:3702)]

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 39/89 (43%), Positives = 49/89 (55%)

Query:    40 LATRLEASGGLTKCWNALMELKSCSNEIAD----------------IGPDCCRAIDIITR 83
             +AT    +G L  CWNA +ELKSC++EI                  I  DCC AI ++ +
Sbjct:    40 MATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVVK 99

Query:    84 NCWSAMLTSLGFTAEEGNILRGYCDAFSA 112
             +CWS M TSLG T  EGN LR YC+ F A
Sbjct:   100 DCWSVMFTSLGLTTMEGNNLREYCE-FQA 127


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.137   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      131       131   0.00091  102 3  11 22  0.50    30
                                                     29  0.42    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  581 (62 KB)
  Total size of DFA:  138 KB (2085 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  13.48u 0.09s 13.57t   Elapsed:  00:00:01
  Total cpu time:  13.48u 0.09s 13.57t   Elapsed:  00:00:02
  Start:  Thu May  9 19:26:26 2013   End:  Thu May  9 19:26:28 2013

GO:0003674 "molecular_function" evidence=ND

GO:0009507 "chloroplast" evidence=ISM

GO:0005576 "extracellular region" evidence=IDA

GO:0009567 "double fertilization forming a zygote and endosperm" evidence=IGI

GO:0031982 "vesicle" evidence=IDA

GO:0080155 "regulation of double fertilization forming a zygote and endosperm" evidence=IMP

GO:2000008 "regulation of protein localization to cell surface" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9T039	EC14_ARATH	No assigned EC number	0.4728	0.8396	0.8661	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00034113001 SubName- Full=Putative uncharacterized protein (Chromosome chr9 scaffold_7, whole genome shotgun sequence); (128 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	131
pfam05617	67	pfam05617, Prolamin_like, Prolamin-like	1e-10

>gnl|CDD|218659 pfam05617, Prolamin_like, Prolamin-like

 Score = 53.3 bits (128), Expect = 1e-10
 Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 10/67 (14%)

Query: 52  KCWNALME-LKSCSNEIAD--------IGPDCCRAIDIITRNCWSAMLTSLGFTAE-EGN 101
           KCW+A    +  C +EI          +GPDCC+AI  I  +CW A+             
Sbjct: 1   KCWSACAVKIPGCVDEIFASIFGNKGNLGPDCCQAILKIGDDCWPALFKMFPSLPFFPPK 60

Query: 102 ILRGYCD 108
           +L+ YC 
Sbjct: 61  LLKNYCS 67

Both DUF784 and DUF1278 members are found to be expressed in the plant embryo sac and are regulated by the Myb98 transcription factor. Computational analysis has revealed that they are homologous to the plant prolamin superfamily (Protease inhibitor-seed storage-LTP family, pfam00234). In contrast to the typical prolamin members that have eight conserved Cys residues forming four pairs of disulfide bonds, both DUF784 and DUF1278 domains only contain six conserved Cys residues that may form three pairs of disulfide bonds. These two domains may have potential functions in lipid transfer or protection during plant embryo sac development and reproduction. This family has been merged with the DUF1278 family. Length = 67

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	131
PLN00213	118	predicted protein; Provisional	99.93
PF05617	70	Prolamin_like: Prolamin-like; InterPro: IPR008502	99.67
PF07172	95	GRP: Glycine rich protein family; InterPro: IPR010	95.67

>PLN00213 predicted protein; Provisional

Probab=99.93  E-value=3.9e-26  Score=171.14  Aligned_cols=69  Identities=26%  Similarity=0.663  Sum_probs=60.3

Q ss_pred             hhhhcCCchhhhhhhhccchhHHhh---------hccChhhhHHHHhhhcccccccccCCCCCcchhhhhhhcccccCCC
Q 047808           43 RLEASGGLTKCWNALMELKSCSNEI---------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGNILRGYCDAFSAP  113 (131)
Q Consensus        43 rl~~~~~~~kCWsSL~~i~gC~~EI---------~~IGp~CCkAI~~I~~~CWP~Mfps~pFtpee~~~LKg~C~~~~~~  113 (131)
                      ++.+..|+.||||||++++||+.||         ++||++|||||++.+ ||||+| |.+||+|   ++||++|++++..
T Consensus        38 ~~pg~pd~~kCwSSl~~vpGCv~EI~~si~~gkf~~Ig~aCCKAf~~~d-nCwP~~-P~~P~fP---p~LK~~Cs~i~~~  112 (118)
T PLN00213         38 LIPGLPDITKCFSSVMDIPGCIAEISQSIFTGKFGNLGPACCKAFLDAD-NCIPKI-PFIPFFP---PMLKEQCSRVAGA  112 (118)
T ss_pred             CCCCCccHHHHHHHHcCCcchHHHHHHHHHhchhcccchHHHHHHHhhh-ccccCC-cCCCccc---hHHHHHHhcccCC
Confidence            3444458999999999999999999         899999999999977 999995 9999999   6999999998555


Q ss_pred             CCC
Q 047808          114 SPG  116 (131)
Q Consensus       114 ~p~  116 (131)
                      +|.
T Consensus       113 ~~~  115 (118)
T PLN00213        113 TPP  115 (118)
T ss_pred             CCC
Confidence            543

>PF05617 Prolamin_like: Prolamin-like; InterPro: IPR008502 This entry consists of several proteins of unknown function found exclusively in Arabidopsis thaliana

Probab=99.67  E-value=1.8e-17  Score=109.99  Aligned_cols=57  Identities=32%  Similarity=0.751  Sum_probs=49.0

Q ss_pred             hhhhhhhccchhHHhh---------hccChhhhHHHHhhhcccccccccCCCCCcchhh----hhhhccc
Q 047808           52 KCWNALMELKSCSNEI---------ADIGPDCCRAIDIITRNCWSAMLTSLGFTAEEGN----ILRGYCD  108 (131)
Q Consensus        52 kCWsSL~~i~gC~~EI---------~~IGp~CCkAI~~I~~~CWP~Mfps~pFtpee~~----~LKg~C~  108 (131)
                      |||+++.++++|..||         .+||++||++|+.++++|||+|+...+++|++.+    .||++|+
T Consensus         1 kc~~~~~~~~~C~~eI~~~~~~g~~~~i~~~CC~~i~~~g~~C~~~l~~~~~~~p~~~~~~r~~l~~~C~   70 (70)
T PF05617_consen    1 KCLSSCAKSPGCGDEIFNSFFNGNKKNIGPECCKAINKMGKDCHPALFKMFPFTPFFKPLLRDLLWNHCS   70 (70)
T ss_pred             ChHHHcCCccchHHHHHHHHHcCCCCCCChHHHHHHHHHhHhHHHHHHHHccCCCCccchhHHHHHhhcC
Confidence            6999999999999999         4899999999999999999995554455555556    9999996

>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins

Probab=95.67  E-value=0.009  Score=43.22  Aligned_cols=28  Identities=21%  Similarity=0.329  Sum_probs=20.4

Q ss_pred             CCchhHHHHHHHHHHHHHhhhhhhccccc
Q 047808            1 MALNHVFFILALTCLIMANIANATSMNDC   29 (131)
Q Consensus         1 MA~~~~fl~~~l~~~~~a~~~~~~~~r~~   29 (131)
                      |||+ .|||++|.|.++.+|||.|+.|++
T Consensus         1 MaSK-~~llL~l~LA~lLlisSevaa~~~   28 (95)
T PF07172_consen    1 MASK-AFLLLGLLLAALLLISSEVAAREL   28 (95)
T ss_pred             Cchh-HHHHHHHHHHHHHHHHhhhhhHHh
Confidence            9954 466666655555667899999988

Some of them may be involved in resistance to environmental stress [].

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00