Citrus Sinensis ID: 047922

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------48
ECDKNNSEEVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTKS
cccccccEEEEEEEEEcccEEEEEEEcccEEEEEEEEccccccccEEEccccHHcccccccccccccccccccccccEEEEccEEEEEEcccccccccccccccccccEEEEEEEccccccEEEEEEEccccccccccEEEEEEEEEEccccEEEEEEEEEEccccccccccccccccccccccccccccEEEEEccEEEEcccccccccccccccccccccccccccHHHHccccccccccEEEcccccccccEEEEEEEccccccEEEEEEcccEEEEEEcccccccccEEEEEEcccccccccccccccccccccccccccccEEEEEccEEEEccccccccccEEccccccccccccccccHHHccccccccccEEEcccccccccEEEEEEEccccccEEEEEEcccEEEEEcccccccccccccEEEcccEEEEEcccccccccccccccccEEccccEEEEEEEEEEEEEc
ccccccccEEEEEEEEcccEEEEEEEccEEEEEEEEcccccccccEEEccccHHHHHccccccEEEEEHHHHHccccEEEEccEEEEEEccccccccccccccccEEEEEEEEEcccccccEEEEEEEccccccccccEEEEEEEEEEccccEEEEEEEEEccccccEEEcccccEEEcccccccccccEEEEEEccccccccccccccccEcccccccccccccccHHHHHHHccccccccEEEcccccccccEEEEEEEccccccEEEEEEccccEEEEEcccccccEEEEEEEEEcccccccccccccccccccccccccccEEEEEEccccccccccccccccEcccccccccccccccHHHHHHHccccccccEEEccccccccccEEEEEEccccccEEEEEEccccEEEEEccccccccccccEEEccccEEEEccccccccccccccccEEEccccEEEEEEEEEEEEcc
ecdknnseEVKFyelkkgdfsvkftnwGATIVSVflpdkdgkvddvvlgydsvddykndttyFGSVVGRVANriggaqftldGTHYKLVAneksnmlhggpkgfsDVIWKVKtyenegptpkivfsyhstdgeegfpgdldvTVSYSLTSEKELSVKMKAKArnkatpvnlaqhsywnlgghssgdiLSQEVQIFassytpvddqliptgkietvegtpydflqphtigssidklpggydinyvldkddsskKMRKVAIVHDKKSGRVMELLadqpgvqyytggqIKEELSVKMKAKArnkatpvnlaqhsywnlgghnsgdilSQEVQIFassytpvddqliptgkietvegtpydflqphaigssidklpvgydinyvldkddsskKMRKVAIVHDKKSGRVMELLadqpgvqyytggqikevrgkggfvykkhaglcletqafpdsvnhpnfpntivypgekykhhmlykfstks
ecdknnseevkfyelkkgdfsvkfTNWGATIVsvflpdkdgkvDDVVLGydsvddyknDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKsnmlhggpkGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIgssidklpggYDINYvldkddsskkMRKVAivhdkksgrvMELLadqpgvqyytgGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIgssidklpvgYDINYVldkddsskkmRKVAivhdkksgrvMELLadqpgvqyytggQIKEVRGKGGFVYKKHAGLCLETqafpdsvnhpnFPNTIVYPGEKYKHHMLYKFSTKS
ECDKNNSEEVKFYELKKGDFSVKFTNWGATIVSVFLPdkdgkvddvvlgydSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTKS
**********KFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTD***GFPGDLDVTVSY**********************VNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLD**********VAIVHD***GRVMELLADQPGVQYYTGGQIKEEL************TPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDK********KVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKF****
****NNSEEVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTKS
ECDKNNSEEVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTKS
*****NSEEVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTKS
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ECDKNNSEEVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTKS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query478 2.2.26 [Sep-21-2011]
Q5EA79342 Aldose 1-epimerase OS=Bos yes no 0.579 0.809 0.437 1e-57
Q9GKX6342 Aldose 1-epimerase OS=Sus yes no 0.579 0.809 0.427 8e-57
Q66HG4342 Aldose 1-epimerase OS=Rat yes no 0.552 0.771 0.44 2e-56
Q96C23342 Aldose 1-epimerase OS=Hom yes no 0.623 0.871 0.402 3e-55
Q5R8U1342 Aldose 1-epimerase OS=Pon yes no 0.623 0.871 0.402 1e-54
Q8K157342 Aldose 1-epimerase OS=Mus yes no 0.552 0.771 0.429 4e-54
P05149381 Aldose 1-epimerase OS=Aci yes no 0.577 0.724 0.384 5e-47
P0A9C4346 Aldose 1-epimerase OS=Shi yes no 0.531 0.734 0.333 5e-39
P0A9C3346 Aldose 1-epimerase OS=Esc N/A no 0.531 0.734 0.333 5e-39
P31765340 Aldose 1-epimerase OS=Hae yes no 0.516 0.726 0.348 3e-33
>sp|Q5EA79|GALM_BOVIN Aldose 1-epimerase OS=Bos taurus GN=GALM PE=2 SV=1 Back     alignment and function desciption
 Score =  224 bits (571), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/288 (43%), Positives = 170/288 (59%), Gaps = 11/288 (3%)

Query: 10  VKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGR 69
           V+ ++L+     V   +WG TI ++ + D+ G+  DVVLG+D ++ Y     YFG+VVGR
Sbjct: 19  VEKFQLQSDQLRVDIISWGCTITALEVKDRQGRASDVVLGFDELEGYLQKQPYFGAVVGR 78

Query: 70  VANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS 129
           VANRI    FTLDG  YKL  N   N LHGG KGF  V+W  +   N      + FS  S
Sbjct: 79  VANRIAKGTFTLDGKEYKLAINNGPNSLHGGVKGFDKVLWTPRVLSN-----GVEFSRVS 133

Query: 130 TDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILS 189
            DGEEG+PG+L V V Y+L    EL V  +A+A ++ TPVNL  HSY+NL G  S +I  
Sbjct: 134 PDGEEGYPGELKVWVMYTLDG-GELVVNYRAQA-SQTTPVNLTNHSYFNLAGQGSPNIYD 191

Query: 190 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKL-PGGYDINYVLDKD 248
            EV I A ++ PVD+ LIPTG+I +V+GT +D  +P  +G  + +    G+D N+ L   
Sbjct: 192 HEVTIEADAFLPVDEVLIPTGEIASVQGTAFDLRKPVELGKHLQEFHVNGFDHNFCL--- 248

Query: 249 DSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKA 296
             SK+ R  A VH   SGRV+E+   QPGVQ+YTG  +   L  K  A
Sbjct: 249 KGSKEKRFCARVHHAGSGRVLEVYTTQPGVQFYTGNFLDGTLKGKSGA 296
Mutarotase converts alpha-aldose to the beta-anomer. It is active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose.
Bos taurus (taxid: 9913)
EC: 5EC: .EC: 1EC: .EC: 3EC: .EC: 3
>sp|Q9GKX6|GALM_PIG Aldose 1-epimerase OS=Sus scrofa GN=GALM PE=2 SV=1 Back     alignment and function description
>sp|Q66HG4|GALM_RAT Aldose 1-epimerase OS=Rattus norvegicus GN=Galm PE=1 SV=1 Back     alignment and function description
>sp|Q96C23|GALM_HUMAN Aldose 1-epimerase OS=Homo sapiens GN=GALM PE=1 SV=1 Back     alignment and function description
>sp|Q5R8U1|GALM_PONAB Aldose 1-epimerase OS=Pongo abelii GN=GALM PE=2 SV=1 Back     alignment and function description
>sp|Q8K157|GALM_MOUSE Aldose 1-epimerase OS=Mus musculus GN=Galm PE=2 SV=1 Back     alignment and function description
>sp|P05149|GALM_ACICA Aldose 1-epimerase OS=Acinetobacter calcoaceticus GN=mro PE=1 SV=1 Back     alignment and function description
>sp|P0A9C4|GALM_SHIFL Aldose 1-epimerase OS=Shigella flexneri GN=galM PE=3 SV=1 Back     alignment and function description
>sp|P0A9C3|GALM_ECOLI Aldose 1-epimerase OS=Escherichia coli (strain K12) GN=galM PE=1 SV=1 Back     alignment and function description
>sp|P31765|GALM_HAEIN Aldose 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=galM PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query478
449459464360 PREDICTED: aldose 1-epimerase-like [Cucu 0.585 0.777 0.671 1e-110
296082878 1699 unnamed protein product [Vitis vinifera] 0.585 0.164 0.683 1e-110
224077612358 predicted protein [Populus trichocarpa] 0.587 0.784 0.684 1e-109
225452733359 PREDICTED: aldose 1-epimerase [Vitis vin 0.587 0.782 0.680 1e-108
225452739359 PREDICTED: aldose 1-epimerase isoform 1 0.585 0.779 0.683 1e-108
356531788371 PREDICTED: aldose 1-epimerase-like [Glyc 0.596 0.768 0.642 1e-106
15824565357 non-cell-autonomous protein pathway1 [Ni 0.571 0.764 0.652 1e-104
224140955359 predicted protein [Populus trichocarpa] 0.629 0.838 0.618 1e-104
363808320371 uncharacterized protein LOC100781853 pre 0.596 0.768 0.628 1e-103
388506504372 unknown [Lotus japonicus] 0.598 0.768 0.628 1e-103
>gi|449459464|ref|XP_004147466.1| PREDICTED: aldose 1-epimerase-like [Cucumis sativus] gi|449520918|ref|XP_004167479.1| PREDICTED: aldose 1-epimerase-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  405 bits (1041), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 188/280 (67%), Positives = 230/280 (82%)

Query: 9   EVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVG 68
           E+  +ELK+GDFSVKFTNWGATIVS+ +PDK GK+DDVVLGYDS+ +Y+NDTTYFGS+VG
Sbjct: 28  EIGIFELKRGDFSVKFTNWGATIVSLLVPDKHGKLDDVVLGYDSIQEYQNDTTYFGSIVG 87

Query: 69  RVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYH 128
           RVANRIGGA+FTLDG  YKL+ANE +N LHGG +GFSDV+WKV  Y+ +G +P+IVFSY 
Sbjct: 88  RVANRIGGAKFTLDGVLYKLIANEGNNTLHGGTRGFSDVVWKVTKYQKDGRSPQIVFSYR 147

Query: 129 STDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDIL 188
           S DGEEGFPGDL VT +Y+L ++ +L + M AKA NK TPVNLAQH+YWNLGGH+SGDIL
Sbjct: 148 SFDGEEGFPGDLLVTATYTLIAKNQLKLTMNAKALNKPTPVNLAQHTYWNLGGHNSGDIL 207

Query: 189 SQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKD 248
           S  +QIF S  T VD  LIPTGK+E V+GTP+DFL+P T+GS I+KLP GYDINY LD  
Sbjct: 208 SNHLQIFGSRITVVDHNLIPTGKLEPVKGTPFDFLKPRTVGSRINKLPKGYDINYALDDG 267

Query: 249 DSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKE 288
               K++K A+VHDKKSGR++EL  + PGVQ+YTG  IK+
Sbjct: 268 TGEHKLKKAAVVHDKKSGRMLELSTNVPGVQFYTGNYIKD 307

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296082878|emb|CBI22179.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224077612|ref|XP_002305327.1| predicted protein [Populus trichocarpa] gi|222848291|gb|EEE85838.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225452733|ref|XP_002282831.1| PREDICTED: aldose 1-epimerase [Vitis vinifera] gi|296082873|emb|CBI22174.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225452739|ref|XP_002282868.1| PREDICTED: aldose 1-epimerase isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356531788|ref|XP_003534458.1| PREDICTED: aldose 1-epimerase-like [Glycine max] Back     alignment and taxonomy information
>gi|15824565|gb|AAL09397.1|AF307094_1 non-cell-autonomous protein pathway1 [Nicotiana tabacum] Back     alignment and taxonomy information
>gi|224140955|ref|XP_002323842.1| predicted protein [Populus trichocarpa] gi|222866844|gb|EEF03975.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|363808320|ref|NP_001241992.1| uncharacterized protein LOC100781853 precursor [Glycine max] gi|255634520|gb|ACU17623.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|388506504|gb|AFK41318.1| unknown [Lotus japonicus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query478
TAIR|locus:2150886490 AT5G15140 [Arabidopsis thalian 0.594 0.579 0.555 1.9e-83
TAIR|locus:2100352358 AT3G47800 [Arabidopsis thalian 0.606 0.810 0.545 5.2e-81
TAIR|locus:2088555341 AT3G17940 [Arabidopsis thalian 0.583 0.818 0.459 1.8e-64
TAIR|locus:2100257426 AT3G01260 [Arabidopsis thalian 0.550 0.617 0.438 7e-54
UNIPROTKB|Q48IT0382 galM "Aldose 1-epimerase" [Pse 0.529 0.662 0.421 2.2e-50
UNIPROTKB|Q5EA79342 GALM "Aldose 1-epimerase" [Bos 0.579 0.809 0.413 9.5e-50
RGD|1359459342 Galm "galactose mutarotase (al 0.573 0.801 0.410 1.5e-49
UNIPROTKB|Q9GKX6342 GALM "Aldose 1-epimerase" [Sus 0.579 0.809 0.406 2.5e-49
UNIPROTKB|E2QWA2342 GALM "Uncharacterized protein" 0.579 0.809 0.395 2.9e-48
UNIPROTKB|J9P687346 GALM "Uncharacterized protein" 0.579 0.800 0.395 2.9e-48
TAIR|locus:2150886 AT5G15140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
 Identities = 159/286 (55%), Positives = 199/286 (69%)

Query:     3 DKNNSEEVKFYELKKGDFSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTY 62
             D N  E++  YELKKG+ +VKFTNWGA+I+S+  P              SV  YK D  Y
Sbjct:   153 DDNEKEKIGLYELKKGNLTVKFTNWGASIISLHFPDKNGKMDDIVLGYDSVKTYKTDKVY 212

Query:    63 FGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPK 122
             FG+ VGRVANRIG  +F L+G  YK   N+  N LHGG KGF DV+W V  ++ +G  P 
Sbjct:   213 FGATVGRVANRIGKGKFKLNGKEYKTSVNDGKNTLHGGKKGFGDVVWAVAKHQYDGKKPH 272

Query:   123 IVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGH 182
             IVF++ S DG++GFPG+L VTV+Y L  + ELSV M+AK ++KATPVNLA HSYWNLGGH
Sbjct:   273 IVFTHTSPDGDQGFPGELSVTVTYKLVKDNELSVVMEAKPKDKATPVNLAHHSYWNLGGH 332

Query:   183 SSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDIN 242
             +SGDILS+E+QI  S YTPVD +LIPTGKI  V+GT YDFLQ   I  ++  L  GYDIN
Sbjct:   333 NSGDILSEEIQILGSGYTPVDGELIPTGKINPVKGTAYDFLQLRPIKDNMKDLKTGYDIN 392

Query:   243 YVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKE 288
             Y LD    +KKMRK+  + DKKSGR MEL  +Q G+Q+YTGG +K+
Sbjct:   393 YCLD--GKAKKMRKIVELVDKKSGRKMELSGNQAGLQFYTGGMLKD 436
GO:0003824 "catalytic activity" evidence=IEA
GO:0004034 "aldose 1-epimerase activity" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0006012 "galactose metabolic process" evidence=ISS
GO:0016853 "isomerase activity" evidence=IEA
GO:0019318 "hexose metabolic process" evidence=IEA
GO:0030246 "carbohydrate binding" evidence=IEA
TAIR|locus:2100352 AT3G47800 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2088555 AT3G17940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2100257 AT3G01260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q48IT0 galM "Aldose 1-epimerase" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] Back     alignment and assigned GO terms
UNIPROTKB|Q5EA79 GALM "Aldose 1-epimerase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
RGD|1359459 Galm "galactose mutarotase (aldose 1-epimerase)" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|Q9GKX6 GALM "Aldose 1-epimerase" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2QWA2 GALM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|J9P687 GALM "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer5.1.3.3LOW CONFIDENCE prediction!
3rd Layer5.1.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query478
PLN00194337 PLN00194, PLN00194, aldose 1-epimerase; Provisiona 1e-168
cd09019326 cd09019, galactose_mutarotase_like, galactose muta 1e-132
PLN00194337 PLN00194, PLN00194, aldose 1-epimerase; Provisiona 1e-112
cd09019326 cd09019, galactose_mutarotase_like, galactose muta 3e-83
pfam01263301 pfam01263, Aldose_epim, Aldose 1-epimerase 2e-78
PRK11055342 PRK11055, galM, galactose-1-epimerase; Provisional 5e-75
TIGR02636336 TIGR02636, galM_Leloir, galactose mutarotase 7e-75
COG2017308 COG2017, GalM, Galactose mutarotase and related en 2e-51
pfam01263301 pfam01263, Aldose_epim, Aldose 1-epimerase 7e-49
TIGR02636336 TIGR02636, galM_Leloir, galactose mutarotase 6e-43
PRK11055342 PRK11055, galM, galactose-1-epimerase; Provisional 1e-39
cd01081284 cd01081, Aldose_epim, aldose 1-epimerase superfami 2e-31
PTZ00485376 PTZ00485, PTZ00485, aldolase 1-epimerase; Provisio 5e-28
COG2017308 COG2017, GalM, Galactose mutarotase and related en 6e-24
cd09022284 cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, 9e-20
PTZ00485376 PTZ00485, PTZ00485, aldolase 1-epimerase; Provisio 1e-15
cd01081284 cd01081, Aldose_epim, aldose 1-epimerase superfami 6e-10
cd09022284 cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, 6e-07
cd09021273 cd09021, Aldose_epim_Ec_YphB, aldose 1-epimerase, 3e-05
PRK15172300 PRK15172, PRK15172, putative aldose-1-epimerase; P 5e-04
>gnl|CDD|215098 PLN00194, PLN00194, aldose 1-epimerase; Provisional Back     alignment and domain information 
 Score =  478 bits (1231), Expect = e-168
 Identities = 170/277 (61%), Positives = 208/277 (75%), Gaps = 2/277 (0%)

Query: 7   SEEVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSV 66
            E+   YELK G+ SVK TN+GATI S+ LPDK+GK+ DVVLG+DSV+ YKND+ YFG++
Sbjct: 6   EEKPGIYELKNGNISVKLTNYGATITSLILPDKNGKLADVVLGFDSVEPYKNDSPYFGAI 65

Query: 67  VGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFS 126
           VGRVANRI GA+FTL+G  YKL  N   N LHGGPKGFS V+W+V  Y+  G  P I F 
Sbjct: 66  VGRVANRIKGAKFTLNGVTYKLPPNNGPNSLHGGPKGFSKVVWEVAKYKK-GEKPSITFK 124

Query: 127 YHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGD 186
           YHS DGEEGFPGDL VTV+Y+L S   L + M+AK  NKATPVNLAQH+YWNL GH+SGD
Sbjct: 125 YHSFDGEEGFPGDLSVTVTYTLLSSNTLRLDMEAKPLNKATPVNLAQHTYWNLAGHNSGD 184

Query: 187 ILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLD 246
           ILS ++QIF S  TPVD+ LIPTG+I  V+GTP+DF  P  IGS I++LP GYD NYVLD
Sbjct: 185 ILSHKIQIFGSHITPVDENLIPTGEILPVKGTPFDFTTPKKIGSRINELPKGYDHNYVLD 244

Query: 247 KDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTG 283
             +  + ++K A V D KSGRV+EL  + PG+Q+YT 
Sbjct: 245 -GEEKEGLKKAAKVKDPKSGRVLELWTNAPGMQFYTS 280

Length = 337
>gnl|CDD|185696 cd09019, galactose_mutarotase_like, galactose mutarotase_like Back     alignment and domain information
>gnl|CDD|215098 PLN00194, PLN00194, aldose 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|185696 cd09019, galactose_mutarotase_like, galactose mutarotase_like Back     alignment and domain information
>gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase Back     alignment and domain information
>gnl|CDD|182931 PRK11055, galM, galactose-1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|233958 TIGR02636, galM_Leloir, galactose mutarotase Back     alignment and domain information
>gnl|CDD|224928 COG2017, GalM, Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|216397 pfam01263, Aldose_epim, Aldose 1-epimerase Back     alignment and domain information
>gnl|CDD|233958 TIGR02636, galM_Leloir, galactose mutarotase Back     alignment and domain information
>gnl|CDD|182931 PRK11055, galM, galactose-1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|185695 cd01081, Aldose_epim, aldose 1-epimerase superfamily Back     alignment and domain information
>gnl|CDD|240435 PTZ00485, PTZ00485, aldolase 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|224928 COG2017, GalM, Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|185699 cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR Back     alignment and domain information
>gnl|CDD|240435 PTZ00485, PTZ00485, aldolase 1-epimerase; Provisional Back     alignment and domain information
>gnl|CDD|185695 cd01081, Aldose_epim, aldose 1-epimerase superfamily Back     alignment and domain information
>gnl|CDD|185699 cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR Back     alignment and domain information
>gnl|CDD|185698 cd09021, Aldose_epim_Ec_YphB, aldose 1-epimerase, similar to Escherichia coli YphB Back     alignment and domain information
>gnl|CDD|237918 PRK15172, PRK15172, putative aldose-1-epimerase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 478
KOG1604353 consensus Predicted mutarotase [Carbohydrate trans 100.0
PRK11055342 galM galactose-1-epimerase; Provisional 100.0
PTZ00485376 aldolase 1-epimerase; Provisional 100.0
TIGR02636335 galM_Leloir galactose mutarotase. Members of this 100.0
PLN00194337 aldose 1-epimerase; Provisional 100.0
cd09019326 galactose_mutarotase_like galactose mutarotase_lik 100.0
PRK15172300 putative aldose-1-epimerase; Provisional 100.0
COG2017308 GalM Galactose mutarotase and related enzymes [Car 100.0
cd09022284 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to 100.0
PF01263300 Aldose_epim: Aldose 1-epimerase; InterPro: IPR0081 100.0
cd01081284 Aldose_epim aldose 1-epimerase superfamily. Aldose 100.0
cd09021273 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to 100.0
cd09024288 Aldose_epim_lacX Aldose 1-epimerase, similar to La 100.0
cd09025271 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to 100.0
cd09020269 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase- 99.92
KOG1604353 consensus Predicted mutarotase [Carbohydrate trans 99.84
PRK11055342 galM galactose-1-epimerase; Provisional 99.78
PLN00194337 aldose 1-epimerase; Provisional 99.77
PTZ00485376 aldolase 1-epimerase; Provisional 99.67
cd09019326 galactose_mutarotase_like galactose mutarotase_lik 99.65
TIGR02636335 galM_Leloir galactose mutarotase. Members of this 99.65
cd09023284 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar t 99.62
PRK15172300 putative aldose-1-epimerase; Provisional 99.61
COG0676287 Uncharacterized enzymes related to aldose 1-epimer 99.36
KOG1594305 consensus Uncharacterized enzymes related to aldos 99.29
PF01263300 Aldose_epim: Aldose 1-epimerase; InterPro: IPR0081 99.25
cd09022284 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to 99.24
COG2017308 GalM Galactose mutarotase and related enzymes [Car 99.01
cd01081284 Aldose_epim aldose 1-epimerase superfamily. Aldose 98.96
cd09021273 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to 98.95
cd09024288 Aldose_epim_lacX Aldose 1-epimerase, similar to La 98.44
cd09269293 deoxyribose_mutarotase deoxyribose mutarotase_like 98.15
cd09025271 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to 97.84
PF14486302 DUF4432: Domain of unknown function (DUF4432); PDB 97.76
cd09023284 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar t 95.52
PF14315274 DUF4380: Domain of unknown function (DUF4380) 95.41
cd09269293 deoxyribose_mutarotase deoxyribose mutarotase_like 94.45
PF14486302 DUF4432: Domain of unknown function (DUF4432); PDB 94.44
TIGR03593366 yidC_nterm membrane protein insertase, YidC/Oxa1 f 93.44
cd09020269 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase- 93.35
PF14849270 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_ 91.32
KOG1594305 consensus Uncharacterized enzymes related to aldos 90.62
PRK01318521 membrane protein insertase; Provisional 87.18
COG0676287 Uncharacterized enzymes related to aldose 1-epimer 81.74
>KOG1604 consensus Predicted mutarotase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=4.9e-78  Score=579.79  Aligned_cols=332  Identities=54%  Similarity=0.923  Sum_probs=307.3

Q ss_pred             CcEEEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhccc-CCCcccceeecCCCccCCcEEEECCE
Q 047922            7 SEEVKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKN-DTTYFGSVVGRVANRIGGAQFTLDGT   84 (478)
Q Consensus         7 ~~~~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~-~~~~~G~~lgp~anRI~~g~~~~~G~   84 (478)
                      .+.+..|+|.|+ +|+|+|+++||+|+||.+||++|+..||||||++.+.|.. +..|||++|||+||||++|+|.++|+
T Consensus        17 ~~~~~~~tl~n~~~l~vti~~~GATi~sL~vpd~~gk~~DVVLGfd~v~gY~~~~~~yfGatvGRvANRI~~G~F~ldgk   96 (353)
T KOG1604|consen   17 KQTIRVYTLGNGKGLQVTIINLGATITSLKVPDKSGKLDDVVLGFDDVDGYLKDDAAYFGATVGRVANRIAKGKFSLDGK   96 (353)
T ss_pred             cCceEEEEecCCCeeEEEEeeCCcEEEEEEcCCcCCcccceEecccchhhhccCCcceecceehhhhhhcccceEEECCc
Confidence            678899999997 5999999999999999999999999999999999999998 57899999999999999999999999


Q ss_pred             EEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCC
Q 047922           85 HYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARN  164 (478)
Q Consensus        85 ~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~  164 (478)
                      .|+|.+|+++|++|||..||+++.|++..+..+   ..|+|++.++++++||||++.+.|+|+|..++.|.|.++|+.++
T Consensus        97 ~y~lt~N~g~n~lHgg~~gf~~~~w~v~~~~~~---~~i~f~~~s~dg~eg~PG~l~V~vtYtLn~~n~l~i~~~A~~~~  173 (353)
T KOG1604|consen   97 PYKLTVNNGKNTLHGGIKGFDKVIWEVVKHQPD---GVIVFSHLSPDGDEGFPGDLKVTVTYTLNVANRLLIMMEATALD  173 (353)
T ss_pred             eEEecccCCCccccCCcccccceEEEEEEecCC---CEEEEEEECCCCCCCCCccEEEEEEEEEccCCeeeeeehhhccC
Confidence            999999999999999999999999999998763   23699999999999999999999999999889999999998878


Q ss_pred             CceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCC--CCccee
Q 047922          165 KATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLP--GGYDIN  242 (478)
Q Consensus       165 ~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~--~g~D~~  242 (478)
                      ++||+||++|.||||.++.+++|.+|+|+|.|++++|+|..+||||++.+|++|+||||.|+.|++.+...+  .|||+|
T Consensus       174 ~~TPiNLtnHsYfNL~g~~s~~I~~heI~i~a~~~~evd~~~iPTG~I~~v~~t~fD~r~p~~lgd~~~~~~~i~g~d~n  253 (353)
T KOG1604|consen  174 KATPINLTNHSYFNLAGHNSGGIEGHEIQIEASKITEVDDTLIPTGEITPVKGTTFDFRKPTVLGDRIKQFECIVGYDIN  253 (353)
T ss_pred             CCcceeeccceeEeccCCCCCCccceEEEEeecccEecCCccccccceEeccCccccccCCeeccccccccccccCCCcc
Confidence            999999999999999999888999999999999999999999999999999999999999999998875443  444555


Q ss_pred             EEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCC
Q 047922          243 YVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGD  322 (478)
Q Consensus       243 f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~  322 (478)
                      |+++                                                                            
T Consensus       254 ~~~~----------------------------------------------------------------------------  257 (353)
T KOG1604|consen  254 YVLD----------------------------------------------------------------------------  257 (353)
T ss_pred             eEEc----------------------------------------------------------------------------
Confidence            5544                                                                            


Q ss_pred             eeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCC
Q 047922          323 ILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSG  402 (478)
Q Consensus       323 v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg  402 (478)
                                                                                  .....+.++.+|++.+|+||
T Consensus       258 ------------------------------------------------------------~~~~~~~l~~v~k~~hp~Sg  277 (353)
T KOG1604|consen  258 ------------------------------------------------------------GSVPPNKLRKVAKAVHPKSG  277 (353)
T ss_pred             ------------------------------------------------------------cCCCCcccEEEEEEEcCccC
Confidence                                                                        32222256789999999999


Q ss_pred             cEEEEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEEec
Q 047922          403 RVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTK  477 (478)
Q Consensus       403 ~~l~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~~~  477 (478)
                      |.|+|+|+||++|+||+|.++...||+|..|.+|+|+|+|+|.+|||+|++.||+++|+|||.|.++++|+|++.
T Consensus       278 r~lEv~TnqPgvqfYTgn~~~~~~gk~g~~y~k~g~~cletq~~pda~n~~~fp~v~l~pGE~Y~h~~~y~Fsv~  352 (353)
T KOG1604|consen  278 RKLEVSTNQPGVQFYTGNFLPDIKGKKGAVYPKHGGLCLETQYFPDAVNHPNFPSVILRPGETYTHETVYKFSVV  352 (353)
T ss_pred             cEEEEEeCCCcEEEEeccccccccCCCceEeeccceEEeecccCccccccCCCCceEecCCCeeeeEEEEEEecc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999975

>PRK11055 galM galactose-1-epimerase; Provisional Back     alignment and domain information
>PTZ00485 aldolase 1-epimerase; Provisional Back     alignment and domain information
>TIGR02636 galM_Leloir galactose mutarotase Back     alignment and domain information
>PLN00194 aldose 1-epimerase; Provisional Back     alignment and domain information
>cd09019 galactose_mutarotase_like galactose mutarotase_like Back     alignment and domain information
>PRK15172 putative aldose-1-epimerase; Provisional Back     alignment and domain information
>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR Back     alignment and domain information
>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5 Back     alignment and domain information
>cd01081 Aldose_epim aldose 1-epimerase superfamily Back     alignment and domain information
>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB Back     alignment and domain information
>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX Back     alignment and domain information
>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438 Back     alignment and domain information
>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like Back     alignment and domain information
>KOG1604 consensus Predicted mutarotase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK11055 galM galactose-1-epimerase; Provisional Back     alignment and domain information
>PLN00194 aldose 1-epimerase; Provisional Back     alignment and domain information
>PTZ00485 aldolase 1-epimerase; Provisional Back     alignment and domain information
>cd09019 galactose_mutarotase_like galactose mutarotase_like Back     alignment and domain information
>TIGR02636 galM_Leloir galactose mutarotase Back     alignment and domain information
>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013 Back     alignment and domain information
>PRK15172 putative aldose-1-epimerase; Provisional Back     alignment and domain information
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1594 consensus Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01263 Aldose_epim: Aldose 1-epimerase; InterPro: IPR008183 Aldose 1-epimerase (5 Back     alignment and domain information
>cd09022 Aldose_epim_Ec_YihR Aldose 1-epimerase, similar to Escherichia coli YihR Back     alignment and domain information
>COG2017 GalM Galactose mutarotase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd01081 Aldose_epim aldose 1-epimerase superfamily Back     alignment and domain information
>cd09021 Aldose_epim_Ec_YphB aldose 1-epimerase, similar to Escherichia coli YphB Back     alignment and domain information
>cd09024 Aldose_epim_lacX Aldose 1-epimerase, similar to Lactococcus lactis lacX Back     alignment and domain information
>cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like Back     alignment and domain information
>cd09025 Aldose_epim_Slr1438 Aldose 1-epimerase, similar to Synechocystis Slr1438 Back     alignment and domain information
>PF14486 DUF4432: Domain of unknown function (DUF4432); PDB: 3TY1_A Back     alignment and domain information
>cd09023 Aldose_epim_Ec_c4013 Aldose 1-epimerase, similar to Escherichia coli c4013 Back     alignment and domain information
>PF14315 DUF4380: Domain of unknown function (DUF4380) Back     alignment and domain information
>cd09269 deoxyribose_mutarotase deoxyribose mutarotase_like Back     alignment and domain information
>PF14486 DUF4432: Domain of unknown function (DUF4432); PDB: 3TY1_A Back     alignment and domain information
>TIGR03593 yidC_nterm membrane protein insertase, YidC/Oxa1 family, N-terminal domain Back     alignment and domain information
>cd09020 D-hex-6-P-epi_like D-hexose-6-phosphate epimerase-like Back     alignment and domain information
>PF14849 YidC_periplas: YidC periplasmic domain; PDB: 3BS6_B 3BLC_B Back     alignment and domain information
>KOG1594 consensus Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK01318 membrane protein insertase; Provisional Back     alignment and domain information
>COG0676 Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query478
1snz_A344 Crystal Structure Of Apo Human Galactose Mutarotase 8e-50
1snz_A344 Crystal Structure Of Apo Human Galactose Mutarotase 2e-41
1lur_A339 Crystal Structure Of The GalmALDOSE EPIMERASE HOMOL 2e-22
1lur_A339 Crystal Structure Of The GalmALDOSE EPIMERASE HOMOL 2e-11
1z45_A699 Crystal Structure Of The Gal10 Fusion Protein Galac 2e-19
1z45_A699 Crystal Structure Of The Gal10 Fusion Protein Galac 1e-11
1yga_A342 Crystal Structure Of Saccharomyces Cerevisiae Yn9a 3e-18
1yga_A342 Crystal Structure Of Saccharomyces Cerevisiae Yn9a 2e-07
1l7j_A347 X-Ray Structure Of Galactose Mutarotase From Lactoc 4e-18
1l7j_A347 X-Ray Structure Of Galactose Mutarotase From Lactoc 8e-09
1ns0_A347 Crystal Structure Of Galactose Mutarotase From Lact 4e-18
1ns0_A347 Crystal Structure Of Galactose Mutarotase From Lact 2e-08
1ns2_A347 Crystal Structure Of Galactose Mutarotase From Lact 4e-18
1ns2_A347 Crystal Structure Of Galactose Mutarotase From Lact 4e-08
3imh_A338 Crystal Structure Of Galactose 1-Epimerase From Lac 6e-18
3imh_A338 Crystal Structure Of Galactose 1-Epimerase From Lac 1e-05
1ns8_A347 Crystal Structure Of Galactose Mutarotase From Lact 1e-17
1ns8_A347 Crystal Structure Of Galactose Mutarotase From Lact 9e-09
1nsu_A347 Crystal Structure Of Galactose Mutarotase From Lact 3e-17
1nsu_A347 Crystal Structure Of Galactose Mutarotase From Lact 7e-09
1nsx_A347 Crystal Structure Of Galactose Mutarotase From Lact 3e-17
1nsx_A347 Crystal Structure Of Galactose Mutarotase From Lact 5e-08
1nsm_A347 Crystal Structure Of Galactose Mutarotase From Lact 3e-17
1nsm_A347 Crystal Structure Of Galactose Mutarotase From Lact 6e-08
>pdb|1SNZ|A Chain A, Crystal Structure Of Apo Human Galactose Mutarotase Length = 344 Back     alignment and structure 
Iteration: 1

 Score =  194 bits (493), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 172/318 (54%), Gaps = 20/318 (6%)
Query: 10  VKFYELKKGDFSVKFTNWGATIVSVFLPXXXXXXXXXXXXXXSVDDYKNDTTYFGSVVGR 69
           V+ ++L+     V   +WG TI ++ +                ++ Y     YFG+V+GR
Sbjct: 21  VEKFQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYFGAVIGR 80
Query: 70  VANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHS 129
           VANRI    F +DG  Y L  N++ N LHGG +GF  V+W  +   N      + FS  S
Sbjct: 81  VANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSN-----GVQFSRIS 135
Query: 130 TDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHSSGDILS 189
            DGEEG+PG+L V V+Y+L    EL V  +A+A ++ATPVNL  HSY+NL G +S +I  
Sbjct: 136 PDGEEGYPGELKVWVTYTLDG-GELIVNYRAQA-SQATPVNLTNHSYFNLAGQASPNIND 193
Query: 190 QEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSI-DKLPGGYDINYVLDKD 248
            EV I A +Y PVD+ LIPTG++  V+GT +D  +P  +G  + D    G+D N+ L   
Sbjct: 194 HEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHNFCL--- 250
Query: 249 DSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLA 308
             SK+    A VH   SGRV+E+   QPGVQ+YTG  +   L      K +N A      
Sbjct: 251 KGSKEKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTL------KGKNGAV---YP 301
Query: 309 QHSYWNLGGHNSGDILSQ 326
           +HS + L   N  D ++Q
Sbjct: 302 KHSGFCLETQNWPDAVNQ 319
>pdb|1SNZ|A Chain A, Crystal Structure Of Apo Human Galactose Mutarotase Length = 344 Back     alignment and structure
>pdb|1LUR|A Chain A, Crystal Structure Of The GalmALDOSE EPIMERASE HOMOLOGUE From C. Elegans, Northeast Structural Genomics Target Wr66 Length = 339 Back     alignment and structure
>pdb|1LUR|A Chain A, Crystal Structure Of The GalmALDOSE EPIMERASE HOMOLOGUE From C. Elegans, Northeast Structural Genomics Target Wr66 Length = 339 Back     alignment and structure
>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 Back     alignment and structure
>pdb|1Z45|A Chain A, Crystal Structure Of The Gal10 Fusion Protein Galactose MutarotaseUDP-Galactose 4-Epimerase From Saccharomyces Cerevisiae Complexed With Nad, Udp-Glucose, And Galactose Length = 699 Back     alignment and structure
>pdb|1YGA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Yn9a Protein, New York Structural Genomics Consortium Length = 342 Back     alignment and structure
>pdb|1YGA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Yn9a Protein, New York Structural Genomics Consortium Length = 342 Back     alignment and structure
>pdb|1L7J|A Chain A, X-Ray Structure Of Galactose Mutarotase From Lactococcus Lactis (Apo) Length = 347 Back     alignment and structure
>pdb|1L7J|A Chain A, X-Ray Structure Of Galactose Mutarotase From Lactococcus Lactis (Apo) Length = 347 Back     alignment and structure
>pdb|1NS0|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant E304q Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NS0|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant E304q Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NS2|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant E304a Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NS2|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant E304a Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|3IMH|A Chain A, Crystal Structure Of Galactose 1-Epimerase From Lactobacillus Acidophilus Ncfm Length = 338 Back     alignment and structure
>pdb|3IMH|A Chain A, Crystal Structure Of Galactose 1-Epimerase From Lactobacillus Acidophilus Ncfm Length = 338 Back     alignment and structure
>pdb|1NS8|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant D243n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NS8|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant D243n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSU|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant H96n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSU|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant H96n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSX|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant H170n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSX|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant H170n Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSM|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant D243a Complexed With Galactose Length = 347 Back     alignment and structure
>pdb|1NSM|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus Lactis Mutant D243a Complexed With Galactose Length = 347 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query478
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 1e-148
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 3e-96
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 1e-146
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 3e-95
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 1e-132
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 1e-88
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 1e-132
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 3e-82
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 1e-128
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 3e-78
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 2e-60
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 2e-30
1z45_A699 GAL10 bifunctional protein; epimerase, mutarotase, 6e-49
1z45_A699 GAL10 bifunctional protein; epimerase, mutarotase, 3e-23
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 2e-37
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 9e-23
3os7_A341 Galactose mutarotase-like protein; structural geno 3e-36
3os7_A341 Galactose mutarotase-like protein; structural geno 3e-14
3q1n_A294 Galactose mutarotase related enzyme; structural ge 1e-12
3dcd_A307 Galactose mutarotase related enzyme; Q5FKD7 LAR33 1e-10
3k25_A289 SLR1438 protein; structural genomics, PSI-2, prote 1e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Length = 344 Back     alignment and structure
 Score =  424 bits (1093), Expect = e-148
 Identities = 117/291 (40%), Positives = 167/291 (57%), Gaps = 11/291 (3%)

Query: 4   KNNSEEVKFYELKKGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYF 63
            +    V+ ++L+     V   +WG TI ++ + D+ G+  DVVLG+  ++ Y     YF
Sbjct: 15  PSGGGTVEKFQLQSDLLRVDIISWGCTITALEVKDRQGRASDVVLGFAELEGYLQKQPYF 74

Query: 64  GSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKI 123
           G+V+GRVANRI    F +DG  Y L  N++ N LHGG +GF  V+W  +   N      +
Sbjct: 75  GAVIGRVANRIAKGTFKVDGKEYHLAINKEPNSLHGGVRGFDKVLWTPRVLSN-----GV 129

Query: 124 VFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGHS 183
            FS  S DGEEG+PG+L V V+Y+L    EL V  +A+A ++ATPVNL  HSY+NL G +
Sbjct: 130 QFSRISPDGEEGYPGELKVWVTYTLD-GGELIVNYRAQA-SQATPVNLTNHSYFNLAGQA 187

Query: 184 SGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPG-GYDIN 242
           S +I   EV I A +Y PVD+ LIPTG++  V+GT +D  +P  +G  +      G+D N
Sbjct: 188 SPNINDHEVTIEADTYLPVDETLIPTGEVAPVQGTAFDLRKPVELGKHLQDFHLNGFDHN 247

Query: 243 YVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVK 293
           + L       +    A VH   SGRV+E+   QPGVQ+YTG  +   L  K
Sbjct: 248 FCLKGSK---EKHFCARVHHAASGRVLEVYTTQPGVQFYTGNFLDGTLKGK 295
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Length = 344 Back     alignment and structure
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Length = 339 Back     alignment and structure
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Length = 339 Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Length = 347 Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Length = 347 Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Length = 342 Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Length = 342 Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Length = 338 Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Length = 338 Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Length = 326 Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Length = 326 Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Length = 699 Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Length = 291 Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Length = 291 Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Length = 341 Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Length = 341 Back     alignment and structure
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Length = 294 Back     alignment and structure
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Length = 307 Back     alignment and structure
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Length = 289 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query478
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 100.0
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 100.0
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 100.0
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 100.0
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 100.0
1z45_A699 GAL10 bifunctional protein; epimerase, mutarotase, 100.0
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 100.0
3os7_A341 Galactose mutarotase-like protein; structural geno 100.0
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 100.0
3q1n_A294 Galactose mutarotase related enzyme; structural ge 100.0
3dcd_A307 Galactose mutarotase related enzyme; Q5FKD7 LAR33 100.0
2hta_A309 Putative enzyme related to aldose 1-epimerase; car 100.0
3k25_A289 SLR1438 protein; structural genomics, PSI-2, prote 100.0
2cir_A297 Hexose-6-phosphate mutarotase; hypothetical protei 100.0
1jov_A270 HI1317; hypothetical protein, structure 2 function 99.83
3imh_A338 Galactose-1-epimerase; structural genomics, PSI-2, 99.74
1nsx_A347 Galactose mutarotase; epimerase, galactose metabol 99.71
1snz_A344 Aldose 1-epimerase; mutarotase, galactosemia, isom 99.64
1lur_A339 Aldose 1-epimerase; vitamin B12, methyltransferase 99.63
3ty1_A384 Hypothetical aldose 1-epimerase; supersandwich, st 99.63
1yga_A342 Hypothetical 37.9 kDa protein in BIO3-HXT17 interg 99.59
1z45_A699 GAL10 bifunctional protein; epimerase, mutarotase, 99.59
3nre_A291 Aldose 1-epimerase; structural genomics, joint cen 99.55
3mwx_A326 Aldose 1-epimerase; structural genomics, joint cen 99.34
3os7_A341 Galactose mutarotase-like protein; structural geno 99.33
3q1n_A294 Galactose mutarotase related enzyme; structural ge 99.07
3dcd_A307 Galactose mutarotase related enzyme; Q5FKD7 LAR33 98.89
2hta_A309 Putative enzyme related to aldose 1-epimerase; car 98.65
2cir_A297 Hexose-6-phosphate mutarotase; hypothetical protei 98.34
3k25_A289 SLR1438 protein; structural genomics, PSI-2, prote 97.48
3ty1_A384 Hypothetical aldose 1-epimerase; supersandwich, st 89.71
3bs6_A280 Inner membrane protein OXAA; YIDC/OXA1/ALB3 family 86.05
3blc_A330 Inner membrane protein OXAA; YIDC, membrane assemb 84.6
1jov_A270 HI1317; hypothetical protein, structure 2 function 81.47
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Back     alignment and structure
Probab=100.00  E-value=1.6e-72  Score=567.36  Aligned_cols=320  Identities=25%  Similarity=0.491  Sum_probs=282.0

Q ss_pred             CCCCCcEEEEEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEE
Q 047922            3 DKNNSEEVKFYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTL   81 (478)
Q Consensus         3 ~~~~~~~~~~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~   81 (478)
                      |+.+|+.+..|+|+|+ +++|+|+++||+|+||++++     +||||||++.++|..++.++|++||||||||++|+|++
T Consensus        11 g~~~g~~v~~~tL~n~~g~~v~i~~~GA~l~sl~~~~-----~dvvlg~~~~~~y~~~~~~~G~~lgp~anRI~~g~f~~   85 (338)
T 3imh_A           11 ERKDNKDLCEITLENDAGMAVKVLNYGATLEKVLLDG-----ENMILSLNSPEDYSKERNFLGGTVGRIAGRVRAGQWKH   85 (338)
T ss_dssp             EEETTEEEEEEEEECSSSEEEEEETBTTEEEEEEETT-----EECBCCCSSGGGGGTSCCCTTCEECSBCSEEGGGEEEE
T ss_pred             cccCCeEEEEEEEECCCcEEEEEecCCcEEEEEEECC-----EEEEecCCChHHhccCCCeEeeEEEeeCCEecCCEEEE
Confidence            4557899999999998 69999999999999999963     79999999999999888899999999999999999999


Q ss_pred             CCEEEEeecCCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEE
Q 047922           82 DGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAK  161 (478)
Q Consensus        82 ~G~~y~L~~N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~  161 (478)
                      +|++|+|++|+++|+||||+ ||+++.|+++.... .+.++|+|++.++++++||||+++++|+|+|+++++|.|+|+|+
T Consensus        86 ~G~~y~L~~N~g~n~LHGg~-g~~~~~W~v~~~~~-~~~~~v~l~l~s~d~~~gyPg~~~~~vtY~L~~~~~L~i~~~a~  163 (338)
T 3imh_A           86 GNEIHQLPLNDGDNHIHGGI-GTDMHVWDFRPSCD-SEHARVDLTLFDPDGNNDYPGNLKLHARYELDNENNLHYLLEAV  163 (338)
T ss_dssp             TTEEEECCCCBTTBEETTSS-CGGGSBCEEEEEEC-SSEEEEEEEEEECTTGGGCCSCEEEEEEEEEETTSEEEEEEEEE
T ss_pred             CCEEEECCCCCCCcCCCCCC-CcCCceEEEEeeee-cCCCEEEEEEECCccccCCCeEEEEEEEEEEecCCeEEEEEEEe
Confidence            99999999999999999999 99999999965322 22368999999998999999999999999999668999999999


Q ss_pred             eCCCceeEeccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcce
Q 047922          162 ARNKATPVNLAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDI  241 (478)
Q Consensus       162 n~~~~~p~nlg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~  241 (478)
                      . +++||||+|+||||||++    ++.+|+|+|+|++++++|+++||||++.+|++|+||||.++.|++.+.....    
T Consensus       164 ~-d~~tp~nlg~HpYFnL~g----~i~~~~L~i~a~~~~~~d~~~iPTG~~~~v~gt~~DFr~~~~ig~~~~~~~~----  234 (338)
T 3imh_A          164 S-DKLTIFNPVNHTYFNLGE----RAEDLNLQMNADYYLPVDEAGLPDRGMAEVAGTAFDFRKTKRIGDALNSDDS----  234 (338)
T ss_dssp             E-SSSEECBCEECCEECTTS----CGGGCEEEECEEEECCBCTTSSBSSCCEECTTSTTCCSSCEEHHHHHTSCCH----
T ss_pred             c-CCCeEEEEeeCCEEeCCC----CcCCeEEEEEcCcEEEeCCccCCcCceecCCCCcccCCCCeEcchhhhccch----
Confidence            8 999999999999999986    6899999999999999999999999999999999999999999876522100    


Q ss_pred             eEEecCCCCcccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCC
Q 047922          242 NYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSG  321 (478)
Q Consensus       242 ~f~l~~~~~~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~  321 (478)
                                                                                                      
T Consensus       235 --------------------------------------------------------------------------------  234 (338)
T 3imh_A          235 --------------------------------------------------------------------------------  234 (338)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CeeceEEEEeccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCC
Q 047922          322 DILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKS  401 (478)
Q Consensus       322 ~v~~~~l~~~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~s  401 (478)
                                                               ++.     ...||||||+++..      +.+|+|.+  |
T Consensus       235 -----------------------------------------q~~-----~~~g~Dh~f~l~~~------~~~a~l~~--s  260 (338)
T 3imh_A          235 -----------------------------------------QIK-----LRNGLDHPFILNGN------NPAALLSS--N  260 (338)
T ss_dssp             -----------------------------------------HHH-----HHTSCEEEEEECSC------SCSEEEEC--S
T ss_pred             -----------------------------------------hhc-----ccCCCCCceeecCC------ceEEEEEC--C
Confidence                                                     000     01267788877321      24567754  9


Q ss_pred             CcEEEEEecCCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEEe
Q 047922          402 GRVMELLADQPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFST  476 (478)
Q Consensus       402 g~~l~v~t~~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~~  476 (478)
                      ||+|+|+|++|++||||+|+++.. | .|..|.+|+|||||||.+|  +|+++|++++|+|||+|.++|+|+|+.
T Consensus       261 g~~l~v~t~~p~~q~YTgn~l~~~-g-~g~~~~~~~g~clE~q~~P--~n~~~f~~~vL~pGe~y~~~t~y~f~~  331 (338)
T 3imh_A          261 KHRLIVKTNAPALVLYAGNHFNHT-G-IVNNIGQYDGITFEAQCPP--AEGNDLGQITLLPFEKFKRTVDWKFEE  331 (338)
T ss_dssp             SEEEEEEESSSEEEEECCTTCCSB-T-TBTTCCTTSCEECEEESCC--CSSSCCGGGEECTTCCEEEEEEEEEEE
T ss_pred             CeEEEEEeCCCEEEEeCCCCcCCC-C-CCcccCccCEEEEEccCCC--CCCCCCCCeEECCCCEEEEEEEEEECC
Confidence            999999999999999999998764 5 5788999999999999999  999999999999999999999999974
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Back     alignment and structure
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Back     alignment and structure
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Back     alignment and structure
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Back     alignment and structure
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Back     alignment and structure
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A Back     alignment and structure
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Back     alignment and structure
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A* Back     alignment and structure
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7 Back     alignment and structure
>3imh_A Galactose-1-epimerase; structural genomics, PSI-2, protein ST initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.76A {Lactobacillus acidophilus} Back     alignment and structure
>1nsx_A Galactose mutarotase; epimerase, galactose metabolism, isomerase; HET: GAL; 1.75A {Lactococcus lactis} SCOP: b.30.5.4 PDB: 1nsz_A* 1mmu_A* 1l7k_A* 1l7j_A* 1mmx_A* 1mmy_A* 1mmz_A* 1mn0_A* 1ns0_A* 1ns4_A* 1ns8_A* 1nsr_A* 1nsu_A* 1nsv_A* 1ns7_A* 1ns2_A* 1nsm_A* 1nss_A* Back     alignment and structure
>1snz_A Aldose 1-epimerase; mutarotase, galactosemia, isomerase; 2.20A {Homo sapiens} SCOP: b.30.5.4 PDB: 1so0_A* Back     alignment and structure
>1lur_A Aldose 1-epimerase; vitamin B12, methyltransferase, structural genomics, structure-based function assignment, decarboxylase, PSI; 1.85A {Caenorhabditis elegans} SCOP: b.30.5.4 Back     alignment and structure
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp} Back     alignment and structure
>1yga_A Hypothetical 37.9 kDa protein in BIO3-HXT17 intergenic region; aldose_1_epimerase, sugar metabolism, predicted, structural genomics; 2.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 Back     alignment and structure
>3nre_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.59A {Escherichia coli} Back     alignment and structure
>3mwx_A Aldose 1-epimerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, isomerase; HET: MSE; 1.45A {Bacillus subtilis} Back     alignment and structure
>3os7_A Galactose mutarotase-like protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: PG4 TLA; 1.80A {Clostridium acetobutylicum} Back     alignment and structure
>3q1n_A Galactose mutarotase related enzyme; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE; 1.61A {Lactobacillus casei} Back     alignment and structure
>3dcd_A Galactose mutarotase related enzyme; Q5FKD7 LAR33 NESG X-RAY, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Lactobacillus acidophilus} Back     alignment and structure
>2hta_A Putative enzyme related to aldose 1-epimerase; carbohydrate, MU YEAD, GALM, sugar phosphate, isomerase; 1.90A {Salmonella typhimurium} PDB: 2htb_A Back     alignment and structure
>2cir_A Hexose-6-phosphate mutarotase; hypothetical protein, isomerase; HET: BG6; 1.60A {Saccharomyces cerevisiae} PDB: 2ciq_A* 2cis_A* Back     alignment and structure
>3k25_A SLR1438 protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, SGR112, P73504_SYNY3; 2.55A {Synechocystis SP} Back     alignment and structure
>3ty1_A Hypothetical aldose 1-epimerase; supersandwich, structural genomics, joint center for structu genomics, JCSG; HET: MSE; 1.90A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3bs6_A Inner membrane protein OXAA; YIDC/OXA1/ALB3 family, membrane insertion, chaperone, SEC translocon, periplasmic domain, beta supersandwich fold; HET: PG4 PGE 2PE; 1.80A {Escherichia coli} Back     alignment and structure
>3blc_A Inner membrane protein OXAA; YIDC, membrane assembly facilitator, chaperone, periplasmic inner membrane, transmembrane; 2.50A {Escherichia coli K12} Back     alignment and structure
>1jov_A HI1317; hypothetical protein, structure 2 function project, S2F, structural genomics, unknown function; 1.57A {Haemophilus influenzae} SCOP: b.30.5.7 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 478
d1nsza_340 b.30.5.4 (A:) Galactose mutarotase {Lactococcus la 3e-68
d1nsza_340 b.30.5.4 (A:) Galactose mutarotase {Lactococcus la 6e-49
d1so0a_344 b.30.5.4 (A:) Galactose mutarotase {Human (Homo sa 8e-68
d1so0a_344 b.30.5.4 (A:) Galactose mutarotase {Human (Homo sa 2e-45
d1z45a1342 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's 8e-66
d1z45a1342 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's 2e-44
d1lura_329 b.30.5.4 (A:) Aldose 1-epimerase homologue {Nemato 7e-65
d1lura_329 b.30.5.4 (A:) Aldose 1-epimerase homologue {Nemato 3e-44
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Length = 340 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Galactose mutarotase
species: Lactococcus lactis [TaxId: 1358]

 Score =  219 bits (559), Expect = 3e-68
 Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 20/307 (6%)

Query: 4   KNNSEEVKFYELK-KGDFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTY 62
           ++         L  K   ++ FTN GA IV      K      ++LG+DS  +Y     Y
Sbjct: 5   RDFGLGSDLISLTNKAGVTISFTNLGARIVDWQKDGKH-----LILGFDSAKEYLEKDAY 59

Query: 63  FGSVVGRVANRIGGAQFTLDGTHYKLVANEKSNMLHGGPKGFSDVIWKVKTYENEGPTPK 122
            G+ VG  A RI      + G  Y L  NE    LHGG +     +W  +  +  G   +
Sbjct: 60  PGATVGPTAGRIKDGLVKISGKDYILNQNEGPQTLHGGEESIHTKLWTYEVTDL-GAEVQ 118

Query: 123 IVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVNLAQHSYWNLGGH 182
           + FS  S DG  G+PG ++++V++S   + +  +  +A + +K T  N   + Y+NL G 
Sbjct: 119 VKFSLVSNDGTNGYPGKIEMSVTHSFDDDNKWKIHYEAIS-DKDTVFNPTGNVYFNLNGD 177

Query: 183 SSGDILSQEVQIFASSYTPVDDQ-LIPTGKIETVEGTPYDFLQPHTIGSSID------KL 235
           +S  + +  +++ AS + P+ DQ  I  G I  ++ T  DF Q   + ++ +      +L
Sbjct: 178 ASESVENHGLRLAASRFVPLKDQTEIVRGDIVDIKNTDLDFRQEKQLSNAFNSNMEQVQL 237

Query: 236 PGGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMK 295
             G D  ++LD+    K                + +  DQP +  +T            K
Sbjct: 238 VKGIDHPFLLDQLGLDK-----EQARLTLDDTSISVFTDQPSIVIFTANFGDLGTLYHEK 292

Query: 296 AKARNKA 302
            +  +  
Sbjct: 293 KQVHHGG 299
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Length = 340 Back     information, alignment and structure
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Length = 344 Back     information, alignment and structure
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Length = 344 Back     information, alignment and structure
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 329 Back     information, alignment and structure
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query478
d1lura_329 Aldose 1-epimerase homologue {Nematode (Caenorhabd 100.0
d1nsza_340 Galactose mutarotase {Lactococcus lactis [TaxId: 1 100.0
d1so0a_344 Galactose mutarotase {Human (Homo sapiens) [TaxId: 100.0
d1z45a1342 Galactose mutarotase {Baker's yeast (Saccharomyces 100.0
d1jova_269 Hypothetical protein HI1317 {Haemophilus influenza 99.81
d1nsza_340 Galactose mutarotase {Lactococcus lactis [TaxId: 1 99.78
d1z45a1342 Galactose mutarotase {Baker's yeast (Saccharomyces 99.72
d1lura_329 Aldose 1-epimerase homologue {Nematode (Caenorhabd 99.59
d1so0a_344 Galactose mutarotase {Human (Homo sapiens) [TaxId: 99.44
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Galactose mutarotase-like
family: Aldose 1-epimerase (mutarotase)
domain: Aldose 1-epimerase homologue
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=9.2e-75  Score=582.42  Aligned_cols=325  Identities=29%  Similarity=0.571  Sum_probs=289.7

Q ss_pred             EEEEEeC-CEEEEEeccCceEEEEEeeCCCCceeeEEecCCChhhcccCCCcccceeecCCCccCCcEEEECCEEEEeec
Q 047922           12 FYELKKG-DFSVKFTNWGATIVSVFLPDKDGKVDDVVLGYDSVDDYKNDTTYFGSVVGRVANRIGGAQFTLDGTHYKLVA   90 (478)
Q Consensus        12 ~~~L~n~-~~~v~v~~~Ga~i~~l~~~d~~G~~~dvv~g~~~~~~y~~~~~~~G~~lgp~anRI~~g~~~~~G~~y~L~~   90 (478)
                      .|+|+|+ +++|+|+++||+|++|+++|++|+++|||+||++.++|..++.|+|++||||||||++|+|+++|++|+|++
T Consensus         4 ~i~l~N~~g~~v~i~~~GA~i~~l~~pd~~g~~~~vvlg~d~~~~Y~~~~~~~Ga~igr~aNRI~~g~f~~~G~~y~L~~   83 (329)
T d1lura_           4 FIEIANKQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQYTMTP   83 (329)
T ss_dssp             CEEEECSSSCEEEEETBTTEEEEEEEECTTSCEEECBCCCSSHHHHHHCSSCTTCEECSBCSEEGGGEEEETTEEEECCC
T ss_pred             EEEEECCCCcEEEEECCCcEEEEEEEECCCCCEeeeEECCCCHHHHhhCCCccCcEecCcCCeeeCCeEEECCEEEEecc
Confidence            5899996 799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCccceEEEEEecCCCCCEEEEEEEeCCCCCCCCceeEEEEEEEEeCCCeEEEEEEEEeCCCceeEe
Q 047922           91 NEKSNMLHGGPKGFSDVIWKVKTYENEGPTPKIVFSYHSTDGEEGFPGDLDVTVSYSLTSEKELSVKMKAKARNKATPVN  170 (478)
Q Consensus        91 N~~~n~lHG~~~g~~~~~w~v~~~~~~~~~~~v~l~~~~~~~~~gyP~~~~~~v~y~L~~~~~l~i~~~~~n~~~~~p~n  170 (478)
                      |+++|+||||..||+.+.|+++....    .+++|++.++++++||||++.++|+|+|++++.|.|+++++. ++++|+|
T Consensus        84 N~~~n~lHGg~~g~~~~~w~v~~~~~----~~v~~~~~~~~~~~GyPg~l~~~vtY~L~~~~~l~i~~~a~~-d~~tp~n  158 (329)
T d1lura_          84 NNGPHYLHGGPNGLGYRKWEVVRHAP----ESVSFSVRANEQDDGLPGDAKIDVTYTVNDRNQLIIEHHATC-DTPGLLA  158 (329)
T ss_dssp             SBTTBEETTCTTSGGGSBCEEEEEET----TEEEEEEEEEHHHHSSSSEEEEEEEEEECTTSEEEEEEEEEC-SSCEECB
T ss_pred             CCCCcccccCCCCcceEEEEEEeecC----ceeEEEEEecCCccCcccceEEEEEEEEccCCEEEEEEEEee-ccccccc
Confidence            99999999999999999999987654    689999999888899999999999999997789999999999 9999999


Q ss_pred             ccCCcccccCCCCCCCccCeEEEEeCceEEeeCCCCCCCCceeccCCCCCCCCCCeeecccccCCCCCcceeEEecCCCC
Q 047922          171 LAQHSYWNLGGHSSGDILSQEVQIFASSYTPVDDQLIPTGKIETVEGTPYDFLQPHTIGSSIDKLPGGYDINYVLDKDDS  250 (478)
Q Consensus       171 lg~HpyFnl~~~~~~~i~d~~L~i~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~l~~~~~  250 (478)
                      +|+|+||||++.  .++.+|.|+|+|++++++|++.||||++.++++++||||.++.|++.+.....             
T Consensus       159 lt~H~YFnL~~~--~~i~~h~L~i~a~~~l~~d~~~iPtG~~~~v~~t~~Dfr~~~~l~~~~~~~~~-------------  223 (329)
T d1lura_         159 LTNHAYWNLDGS--DTVAEHFLEMEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEE-------------  223 (329)
T ss_dssp             CEECCEECSSCC--SCSTTCEEEECEEEEEEECTTSCEEEEEEECTTSTTCCTTCEETTCSCCCSSC-------------
T ss_pred             ccccceeecccc--ccccCeEEEeCcCeEEEeCcccccccccccccccccccccccccccccccccc-------------
Confidence            999999999874  47999999999999999999999999999999999999999998876532110             


Q ss_pred             cccceeEEEEEcCCCCeEEEEEecCCceEEEcCCceeeeeeEEEEEeeccCCcceeecccceeecCCCCCCCeeceEEEE
Q 047922          251 SKKMRKVAIVHDKKSGRVMELLADQPGVQYYTGGQIKEELSVKMKAKARNKATPVNLAQHSYWNLGGHNSGDILSQEVQI  330 (478)
Q Consensus       251 ~~~~~~~~~l~~~~sg~~L~v~~~~p~~q~yt~~~~~~~l~v~~~a~~~~~~~p~~~~~H~yfnl~g~~~~~v~~~~l~~  330 (478)
                                                                                                      
T Consensus       224 --------------------------------------------------------------------------------  223 (329)
T d1lura_         224 --------------------------------------------------------------------------------  223 (329)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             eccceeccCCCCCcccceeccCCCCcccCCceeccccccCCCcccceeEEeccCCCcccceeEEEEEcCCCCcEEEEEec
Q 047922          331 FASSYTPVDDQLIPTGKIETVEGTPYDFLQPHAIGSSIDKLPVGYDINYVLDKDDSSKKMRKVAIVHDKKSGRVMELLAD  410 (478)
Q Consensus       331 ~a~~~~~~d~~~iPtG~~~~v~~t~~Df~~~~~i~~~~~~~~~g~D~~f~~~~~~~~~~~~~~a~l~~~~sg~~l~v~t~  410 (478)
                                                               ..+|||+|++.........+.+++|.++.+|++|+|+|+
T Consensus       224 -----------------------------------------~~~~d~~~~~~~~~~~~~~~~~~~l~~~~sg~~l~v~t~  262 (329)
T d1lura_         224 -----------------------------------------LLDLDNDLVITKKTPPSTPSTYLRFWSEKSGIELSITTS  262 (329)
T ss_dssp             -----------------------------------------CCCCEEEEEECCCCC----CCCEEEECTTTCEEEEEEES
T ss_pred             -----------------------------------------ceecCCCEEEeecccCCCcceeEEEeCCCCceEEEEeCC
Confidence                                                     013444444432211112234588999999999999999


Q ss_pred             CCeeEEEeCCccccccCCCCeeeecceEEEEccCCCCCCCCCCCCCCceecCCCEEEEEEEEEEEecC
Q 047922          411 QPGVQYYTGGQIKEVRGKGGFVYKKHAGLCLETQAFPDSVNHPNFPNTIVYPGEKYKHHMLYKFSTKS  478 (478)
Q Consensus       411 ~p~~qvyT~~~~~~~~~~~~~~~~~~~~i~~E~~~~pda~n~~~~~~~~l~pg~~~~~~~~y~f~~~~  478 (478)
                      +|++||||+++++. .++.|..+.+++|||||||++|||+|+++|++++|+|||+|+++|+|+|++.+
T Consensus       263 ~p~~qvYT~~~l~~-~~~~g~~~~~~~gi~lEpq~~PdA~N~~~f~~~~L~pge~y~~~~~y~Fs~~~  329 (329)
T d1lura_         263 YPVIHLYASKFLDC-KGKKGEHYKANKALAIEPQFHSAAPNFDHFPDVSLRPGDHYCQEIVYTFSHVN  329 (329)
T ss_dssp             SSEEEEECCTTCCE-ECGGGCEECTTCCEEEEEESCTTGGGCTTSCCCEECTTCCEEEEEEEEEEECC
T ss_pred             CCEEEEeCCCCcCC-CCCCCCCcCCCCEEEEEccCCCCccccCCCCCeEECCCCEEEEEEEEEEecCC
Confidence            99999999999864 57888999999999999999999999999999999999999999999999864
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1jova_ b.30.5.7 (A:) Hypothetical protein HI1317 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1nsza_ b.30.5.4 (A:) Galactose mutarotase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1z45a1 b.30.5.4 (A:358-699) Galactose mutarotase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1lura_ b.30.5.4 (A:) Aldose 1-epimerase homologue {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Back     information, alignment and structure
>d1so0a_ b.30.5.4 (A:) Galactose mutarotase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure