Citrus Sinensis ID: 048074

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230---
Protein Sequence
MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE
Secondary Structure (PSIPRED)
cccccccccccEEEEEcccccccccccEEEEEEEEEEcccHHHHHHHHccccccEEEHHHHHccccccccccccEEEccccccccEEEEEEEEEEEcccccccccccccHHHHccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHEEccccccccHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHcEccEEEEEEEEEEEEcccccEEEEEEEEEEccccccHHHHcccccccccEEEEEEEEccEEEEEccccccccccccccccEEEEEEEEEccccccccccccccHHHHccEEEEEEEEcccccccccHHHccHccccHHEEEcccccccccccHHHcccccEEEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHccccHHHHHHHHHHHHHHHHH
Coil and Loop (DISEMBL)
mqqqnsngdegvdvlenrpfehdvfgrgqYTFKVYRFqskapawlktfapaDALVMHEeawnsyprcktvsntfidlflqcpyftkfSLTIETVHkadngrsdnvhnlsEEQLAARQVEVLDIASTARDYWSYAIasnnvdfskfkskrtgrgplsegwqdrcnpVMTAYKLVtidapywgfGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQqsgsslne
Flexible Loop (DISEMBL)
mqqqnsngdegvDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIasnnvdfskfkskrtgrgplsegwqdrcNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREieqqsgsslne
Low Complexity Region (SEG)
MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE
Disordered region (IsUnstruct)
****************NRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKA***************LAARQVEVLDIASTARDYWSYAIASNNVDFSKFK********LSEGWQDRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQI*************
Disordered Region (DISOPRED)
************DVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQ********
Disordered Region (DISEMBL)
**********GVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIRE***********
Disordered Region (DISPRO)
*****SNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLN*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	233	2.2.26 [Sep-21-2011]
Q9NCL8	264	Phosphatidylinositol tran	yes	no	0.922	0.814	0.405	6e-46
P48738	270	Phosphatidylinositol tran	yes	no	0.922	0.796	0.400	2e-41
P53810	271	Phosphatidylinositol tran	yes	no	0.927	0.797	0.388	4e-41
P16446	271	Phosphatidylinositol tran	yes	no	0.927	0.797	0.388	5e-41
Q00169	270	Phosphatidylinositol tran	yes	no	0.922	0.796	0.392	2e-40
Q2HJ54	270	Phosphatidylinositol tran	yes	no	0.922	0.796	0.392	3e-40
Q9NCL7	259	Phosphatidylinositol tran	no	no	0.918	0.826	0.369	1e-39
Q6ZPQ6	1335	Membrane-associated phosp	no	no	0.879	0.153	0.375	4e-38
P53812	271	Phosphatidylinositol tran	no	no	0.935	0.804	0.370	6e-38
P43125	1259	Protein retinal degenerat	no	no	0.935	0.173	0.367	9e-38

>sp|Q9NCL8|PITP1_DICDI Phosphatidylinositol transfer protein 1 OS=Dictyostelium discoideum GN=pitA PE=1 SV=1

 Score =  184 bits (466), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 143/237 (60%), Gaps = 22/237 (9%)

Query: 3   QQNSNGDEGVDVLENRPF---EHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEE 59
           Q+ SNG EGV+VL N P+   EH+    GQYT K+Y   S+ P W++   P+ AL + E+
Sbjct: 31  QETSNG-EGVEVLVNEPYKEPEHE----GQYTHKIYHLGSRLPGWIRALIPSSALKLEEK 85

Query: 60  AWNSYPRCKTVSNTFIDLFLQCPYF-TKFSLTIETVHKADNGRSDNVHNLSEEQLAARQV 118
           AWN+YP CKTV        L+ P+   KF+  IE+ H  DN +++N+HNLSE++L  R V
Sbjct: 86  AWNAYPYCKTV--------LKSPFLGEKFTFIIESRHAQDNCKTENIHNLSEKELKERTV 137

Query: 119 EVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSE-GWQDRCN-PVMTAYKLVTID 176
           EV+DI    +D  +Y       D +K +S++  RGPL E  W++    P+MT YKLVT++
Sbjct: 138 EVIDITKPIKDPKNY---KETEDPTKIRSEKANRGPLEEEKWRESTEMPIMTCYKLVTVE 194

Query: 177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
             Y+GF  ++E  ++  E  LF + HR  + W+DEWFGM+M  +R  E ++   L +
Sbjct: 195 FKYFGFQTKVENFMMGIEFDLFTKFHRQVYCWLDEWFGMSMDDVRAFELKTKEDLKK 251

Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.
Dictyostelium discoideum (taxid: 44689)

>sp|P48738|PIPNA_RABIT Phosphatidylinositol transfer protein alpha isoform OS=Oryctolagus cuniculus GN=PITPNA PE=3 SV=2

 Score =  168 bits (426), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 133/242 (54%), Gaps = 27/242 (11%)

Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EGV+VL N P+E D   RGQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct: 31  KNETGGGEGVEVLVNEPYEKD-GERGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 89

Query: 63  SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+TV +N ++           F + IET HK D G  +NVH L  E     +V  +
Sbjct: 90  AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPETWKHVEVIYI 141

Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
           DIA      ++DY          D +KFKS +TGRGPL   W      Q  C P M AYK
Sbjct: 142 DIADRSQVLSKDY------KAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDC-PYMCAYK 194

Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
           LVT+   +WG   ++E  +   ER LF   HR  F W+D+W  +TM  IR +E+++   L
Sbjct: 195 LVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQL 254

Query: 232 NE 233
           +E
Sbjct: 255 DE 256

Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.

Oryctolagus cuniculus (taxid: 9986)

>sp|P53810|PIPNA_MOUSE Phosphatidylinositol transfer protein alpha isoform OS=Mus musculus GN=Pitpna PE=1 SV=2

 Score =  167 bits (424), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 132/242 (54%), Gaps = 26/242 (10%)

Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct: 31  KNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 90

Query: 63  SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+TV +N ++           F + IET HK D G  +NVH L  E     +   +
Sbjct: 91  AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAIYI 142

Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
           DIA      ++DY          D +KFKS +TGRGPL   W      Q  C P M AYK
Sbjct: 143 DIADRSQVLSKDY------KAEEDPAKFKSVKTGRGPLGPNWKQELVNQKDC-PYMCAYK 195

Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
           LVT+   +WG   ++E  +   E+ LF   HR  F W+D+W  +TM  IR +E+++   L
Sbjct: 196 LVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQL 255

Query: 232 NE 233
           +E
Sbjct: 256 DE 257

Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.

Mus musculus (taxid: 10090)

>sp|P16446|PIPNA_RAT Phosphatidylinositol transfer protein alpha isoform OS=Rattus norvegicus GN=Pitpna PE=1 SV=2

 Score =  167 bits (424), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 132/242 (54%), Gaps = 26/242 (10%)

Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct: 31  KNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 90

Query: 63  SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+TV +N ++           F + IET HK D G  +NVH L  E     +   +
Sbjct: 91  AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAIYI 142

Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
           DIA      ++DY          D +KFKS +TGRGPL   W      Q  C P M AYK
Sbjct: 143 DIADRSQVLSKDY------KAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDC-PYMCAYK 195

Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
           LVT+   +WG   ++E  +   E+ LF   HR  F W+D+W  +TM  IR +E+++   L
Sbjct: 196 LVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQL 255

Query: 232 NE 233
           +E
Sbjct: 256 DE 257

Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.

Rattus norvegicus (taxid: 10116)

>sp|Q00169|PIPNA_HUMAN Phosphatidylinositol transfer protein alpha isoform OS=Homo sapiens GN=PITPNA PE=1 SV=2

 Score =  166 bits (419), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 132/242 (54%), Gaps = 27/242 (11%)

Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct: 31  KNETGGGEGVEVLVNEPYEKD-GEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 89

Query: 63  SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+TV +N ++           F + IET HK D G  +NVH L  E     +   +
Sbjct: 90  AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAVYI 141

Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
           DIA      ++DY          D +KFKS +TGRGPL   W      Q  C P M AYK
Sbjct: 142 DIADRSQVLSKDY------KAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDC-PYMCAYK 194

Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
           LVT+   +WG   ++E  +   ER LF   HR  F W+D+W  +TM  IR +E+++   L
Sbjct: 195 LVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQL 254

Query: 232 NE 233
           +E
Sbjct: 255 DE 256

Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.

Homo sapiens (taxid: 9606)

>sp|Q2HJ54|PIPNA_BOVIN Phosphatidylinositol transfer protein alpha isoform OS=Bos taurus GN=PITPNA PE=1 SV=3

 Score =  164 bits (416), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 132/242 (54%), Gaps = 27/242 (11%)

Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct: 31  KNETGGGEGVEVLVNEPYEKD-GEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 89

Query: 63  SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+TV +N ++           F + IET HK D G  +NVH L  E     +V  +
Sbjct: 90  AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTLENVHKLEPEAWKHVEVIYI 141

Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
           DIA      ++DY          D +K+KS +TGRGPL   W      Q  C P M AYK
Sbjct: 142 DIADRSQVLSKDY------KAEEDPAKYKSIKTGRGPLGPNWKQELVNQKDC-PYMCAYK 194

Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
           LVT+   +WG   ++E  +   ER LF   HR  F W+D+W  +TM  IR +E ++   L
Sbjct: 195 LVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEDETKRQL 254

Query: 232 NE 233
           +E
Sbjct: 255 DE 256

Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.

Bos taurus (taxid: 9913)

>sp|Q9NCL7|PITP2_DICDI Phosphatidylinositol transfer protein 2 OS=Dictyostelium discoideum GN=pitB PE=2 SV=1

 Score =  162 bits (411), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/233 (36%), Positives = 136/233 (58%), Gaps = 19/233 (8%)

Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           ++++ G EG+++++N PF+++  G+GQYT K+    +  P +     P+ AL + E+AWN
Sbjct: 30  KESTKGGEGIEIIKNEPFDNEK-GKGQYTEKIIYLANSLPRFAAAILPSSALKIEEKAWN 88

Query: 63  SYPRCKTVSNTFIDLFLQCPYF-TKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP CKT  +        CP+F  K  L+IE++H    G  +N      E L  R V+ +
Sbjct: 89  AYPYCKTEYS--------CPFFGEKLVLSIESMHLPGRGEVENALKCDAETLKQRHVDFI 140

Query: 122 DIAS-TARDYWSYAIASNNVDFSKFKSKRTGRGPLSE-GWQDRCNPVMTAYKLVTIDAPY 179
           DIA+   ++Y          D   FKS +T RGPL +  W+D+  PVMT YKLV  +  Y
Sbjct: 141 DIANDQPKEY------IKEEDPKIFKSVKTERGPLDDPKWRDKVEPVMTCYKLVHAEFKY 194

Query: 180 WGFGYRLEQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
           WGF  ++E  +   G R + L++HR  F WIDEWFG+T++ IR+IE+++ + L
Sbjct: 195 WGFQTKVENVIQDTGVRDVLLKAHRALFCWIDEWFGLTIEDIRKIEEETKAEL 247

Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.

Dictyostelium discoideum (taxid: 44689)

>sp|Q6ZPQ6|PITM2_MOUSE Membrane-associated phosphatidylinositol transfer protein 2 OS=Mus musculus GN=Pitpnm2 PE=1 SV=2

 Score =  158 bits (399), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 125/221 (56%), Gaps = 16/221 (7%)

Query: 11  GVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTV 70
           GV++LENRP+     G GQYT KVY      P W ++  P  AL + EE+WN+YP  +T 
Sbjct: 39  GVEILENRPYTDGPGGSGQYTHKVYHVGMHIPGWFRSILPKAALRVVEESWNAYPYTRT- 97

Query: 71  SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDY 130
                     CP+  KFS+ IET +K D G ++NV NLS  + +    +++DI    +D 
Sbjct: 98  -------RFTCPFVEKFSIDIETFYKTDTGENNNVFNLSPVEKSQLITDIIDI---VKDP 147

Query: 131 WSYAIASNNVDFSKFKSKRTGRGPLSEGW----QDRCNPVMTAYKLVTIDAPYWGFGYRL 186
              +      D   F+S +T RGPLSE W    + R  P+M AYKL  ++  YWG   ++
Sbjct: 148 VPPSEYKTEEDPKLFQSVKTCRGPLSENWIQEYKKRLLPIMCAYKLCKVEFRYWGMQSKI 207

Query: 187 EQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQ 226
           E+ +   G R + + +HR  + W DEW+G+TM++IRE+E++
Sbjct: 208 ERFIHDTGLRRVMVRAHRQAWCWQDEWYGLTMEKIRELERE 248

Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes (in vitro). Binds calcium ions.

Mus musculus (taxid: 10090)

>sp|P53812|PIPNB_RAT Phosphatidylinositol transfer protein beta isoform OS=Rattus norvegicus GN=Pitpnb PE=1 SV=2

 Score =  157 bits (397), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 17/235 (7%)

Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EG++VL+N P+E+D   +GQYT K+Y  +SK PA+++  AP  +LV HE+AWN
Sbjct: 31  KNETGGGEGIEVLKNEPYEND-GEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWN 89

Query: 63  SYPRCKT-VSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+T V+N ++           F + IET HK D G  +NVH L        ++  +
Sbjct: 90  AYPYCRTIVTNEYMK--------DDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHI 141

Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCN-----PVMTAYKLVTID 176
           DIA   R     A    + D + F+S +T RGPL   W+         P M AYKLVTI 
Sbjct: 142 DIAD--RSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANTPDCPKMCAYKLVTIK 199

Query: 177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
             +WG   ++E  +   E+ +F   HR  F WID+W  +TM+ IR +E ++   L
Sbjct: 200 FKWWGLQSKVENFIQKQEKRIFTNLHRQLFCWIDKWIDLTMEDIRRMEDETQKEL 254

Catalyzes the transfer of PtdIns and phosphatidylcholine between membranes.

Rattus norvegicus (taxid: 10116)

>sp|P43125|RDGB_DROME Protein retinal degeneration B OS=Drosophila melanogaster GN=rdgB PE=1 SV=2

 Score =  157 bits (396), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 130/245 (53%), Gaps = 27/245 (11%)

Query: 3   QQNSNGD-EGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAW 61
           ++ S+G+  GV+++ N P++    G GQYT K+Y   +  P W+K+  P  AL + EEAW
Sbjct: 30  REESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAW 89

Query: 62  NSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           N+YP  +T           CP+  KFSL IET +  DNG  DNV  LS   L  R V+V+
Sbjct: 90  NAYPYTRT--------RYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVI 141

Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQD--------------RCNPVM 167
           DI       W         D   F S +TGRGPL+E W +              R   +M
Sbjct: 142 DIVKD--QLWGGDYVKEE-DPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLM 198

Query: 168 TAYKLVTIDAPYWGFGYRLEQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQ 226
           TAYK+  ++  YWG   +LE+ +     R + L +HR  + W DEWFG+T++ IRE+E+Q
Sbjct: 199 TAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQ 258

Query: 227 SGSSL 231
           +  +L
Sbjct: 259 TQLAL 263

May control phosphatidylinositol concentration in transport vesicles from the subrhabdomeric cisternae (SRC) to the rhabdomere. May function as a calcium transporter.

Drosophila melanogaster (taxid: 7227)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	233
225435211	302	PREDICTED: phosphatidylinositol transfer	0.957	0.738	0.732	1e-101
147781716	417	hypothetical protein VITISV_017583 [Viti	0.957	0.534	0.732	1e-100
255570771	294	retinal degeneration B beta, putative [R	0.987	0.782	0.629	1e-80
242036061	283	hypothetical protein SORBIDRAFT_01g03866	0.965	0.795	0.575	7e-80
108707569	283	Phosphatidylinositol transfer protein, e	0.939	0.773	0.590	1e-78
218192584	273	hypothetical protein OsI_11083 [Oryza sa	0.939	0.802	0.590	1e-78
222624710	255	hypothetical protein OsJ_10423 [Oryza sa	0.939	0.858	0.590	2e-78
326491239	283	predicted protein [Hordeum vulgare subsp	0.965	0.795	0.570	5e-78
357112754	283	PREDICTED: phosphatidylinositol transfer	0.939	0.773	0.572	5e-77
297746204	253	unnamed protein product [Vitis vinifera]	0.652	0.600	0.771	9e-68

>gi|225435211|ref|XP_002284874.1| PREDICTED: phosphatidylinositol transfer protein 1-like [Vitis vinifera]

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 170/232 (73%), Positives = 196/232 (84%), Gaps = 9/232 (3%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
           MQQQ +  DEGV+VLENR F+ D  G+GQYT KVYR QSK PAWL TFAPADAL M EEA
Sbjct: 29  MQQQTTTSDEGVEVLENRSFQDDALGKGQYTSKVYRLQSKVPAWLTTFAPADALTMQEEA 88

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEV 120
           WN+YPRCKTV        ++CPYF KF L I+TVHKADNG+S+NVH L+++QLAARQVEV
Sbjct: 89  WNAYPRCKTV--------IKCPYFNKFCLAIDTVHKADNGQSENVHGLNKKQLAARQVEV 140

Query: 121 LDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYW 180
           +DIAS ARDYWSY +  N+VDFSKF+S +TGRGPL EGWQ  C+PVMTAYKLVT+DAPYW
Sbjct: 141 IDIASAARDYWSYVVGGNSVDFSKFRSAKTGRGPLLEGWQS-CDPVMTAYKLVTVDAPYW 199

Query: 181 GFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLN 232
           GFG RLEQA LAGERALFLESHRNCFGWIDEWFGMT+QQ+RE+E+Q+ SSL+
Sbjct: 200 GFGNRLEQAFLAGERALFLESHRNCFGWIDEWFGMTVQQLRELEEQTNSSLD 251

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147781716|emb|CAN69739.1| hypothetical protein VITISV_017583 [Vitis vinifera]

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 170/232 (73%), Positives = 195/232 (84%), Gaps = 9/232 (3%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
           MQQQ +  DEGV+VLENR F+ D  G+GQYT KVYR QSK PAWL TFAPADAL M EEA
Sbjct: 144 MQQQTTTSDEGVEVLENRSFQDDALGKGQYTSKVYRLQSKVPAWLTTFAPADALTMQEEA 203

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEV 120
           WN+YPRCKTV        ++CPYF KF L I+TVHKADNG+S+NVH L++ QLAARQVEV
Sbjct: 204 WNAYPRCKTV--------IKCPYFNKFCLXIDTVHKADNGQSENVHGLNKXQLAARQVEV 255

Query: 121 LDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYW 180
           +DIAS ARDYWSY +  N+VDFSKF+S +TGRGPL EGWQ  C+PVMTAYKLVT+DAPYW
Sbjct: 256 IDIASAARDYWSYVVGGNSVDFSKFRSAKTGRGPLLEGWQS-CDPVMTAYKLVTVDAPYW 314

Query: 181 GFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLN 232
           GFG RLEQA LAGERALFLESHRNCFGWIDEWFGMT+QQ+RE+E+Q+ SSL+
Sbjct: 315 GFGNRLEQAFLAGERALFLESHRNCFGWIDEWFGMTVQQLRELEEQTNSSLD 366

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255570771|ref|XP_002526338.1| retinal degeneration B beta, putative [Ricinus communis] gi|223534297|gb|EEF36009.1| retinal degeneration B beta, putative [Ricinus communis]

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 151/240 (62%), Positives = 174/240 (72%), Gaps = 10/240 (4%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGR-------GQYTFKVYRFQSKAPAWLKTFAPADA 53
           MQQ+ +   EGV+VLENRP E DVFG        G Y   +++  S        +     
Sbjct: 19  MQQETTTSTEGVEVLENRPLEDDVFGEFYAVLDLGWYRTGMWQNGSTQK---NMYEAKRL 75

Query: 54  LVMHEEAWNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQL 113
           L +          CK           QCPYFTKFSLT+ET+H+ DNG+S+NVH LS+EQL
Sbjct: 76  LGLQLLHQLMLSSCKKKLGMHTQDAKQCPYFTKFSLTVETIHRDDNGQSENVHGLSKEQL 135

Query: 114 AARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLV 173
           A+RQVE +DIAS A DYWSYAI SN++DFSKFKS RTGRGPL +GWQDRC PVMTAYKLV
Sbjct: 136 ASRQVEYIDIASAATDYWSYAIGSNSIDFSKFKSLRTGRGPLLDGWQDRCKPVMTAYKLV 195

Query: 174 TIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
           TIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGM+MQQ+RE+E QS SSLN+
Sbjct: 196 TIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMSMQQLRELELQSNSSLNK 255

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242036061|ref|XP_002465425.1| hypothetical protein SORBIDRAFT_01g038660 [Sorghum bicolor] gi|241919279|gb|EER92423.1| hypothetical protein SORBIDRAFT_01g038660 [Sorghum bicolor]

 Score =  302 bits (774), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 134/233 (57%), Positives = 175/233 (75%), Gaps = 8/233 (3%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
           M+QQN+N  EGV+VL   PFE +  G+GQ+T KVY  QSK P+W+K FAP+ AL +HE++
Sbjct: 29  MEQQNTNSKEGVEVLRQVPFEDEKLGKGQFTSKVYHLQSKIPSWMKGFAPSSALTVHEDS 88

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEV 120
           W ++P+ +TV        ++CP F+K SLTI+TV + DNG S+NVHNL+ EQLAAR+VE+
Sbjct: 89  WCAFPKSRTV--------IKCPLFSKCSLTIDTVTRPDNGCSENVHNLTSEQLAAREVEI 140

Query: 121 LDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYW 180
           +DIAS +RDYWS  I + NVD + FKS+RT RGPL +GW D C PVMT YKL+ +DAP W
Sbjct: 141 IDIASISRDYWSKVIGAPNVDLTTFKSQRTERGPLLKGWMDSCVPVMTTYKLLIMDAPIW 200

Query: 181 GFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
           G G RLE  ++AGERALFL  HR CF WIDEW+GMTM+QIRE+E+Q+   L +
Sbjct: 201 GLGERLEDCIIAGERALFLACHRLCFAWIDEWYGMTMEQIREMERQTDMLLKK 253

Source: Sorghum bicolor

Species: Sorghum bicolor

Genus: Sorghum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|108707569|gb|ABF95364.1| Phosphatidylinositol transfer protein, expressed [Oryza sativa Japonica Group]

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 134/227 (59%), Positives = 170/227 (74%), Gaps = 8/227 (3%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
           M+QQN+N  EGV+VL+  PFE +  G+GQYT K Y  QSK P+W+K FAPA AL +HEE+
Sbjct: 29  MEQQNTNSKEGVEVLQQVPFEDEKLGKGQYTSKNYHLQSKIPSWMKGFAPASALTVHEES 88

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEV 120
           W +YP  +TV        ++CP F+K SLTI+TV + DNG S+N HNL+ EQLAAR+VEV
Sbjct: 89  WCAYPNSRTV--------IKCPLFSKCSLTIDTVIRPDNGCSENAHNLTSEQLAAREVEV 140

Query: 121 LDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYW 180
           +DIA  +RDYWS  I++ NVD + F+S+RT RGPL +GW D C PVMT YKLV +DAP W
Sbjct: 141 VDIALQSRDYWSKVISAPNVDLTAFRSQRTSRGPLLKGWMDSCRPVMTTYKLVIMDAPIW 200

Query: 181 GFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQS 227
           G G RLE  ++AGERALFL  HR CF WIDEW+GMT+ QIRE+E+Q+
Sbjct: 201 GLGERLEDCIIAGERALFLACHRLCFAWIDEWYGMTLDQIREMERQT 247

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|218192584|gb|EEC75011.1| hypothetical protein OsI_11083 [Oryza sativa Indica Group]

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 134/227 (59%), Positives = 170/227 (74%), Gaps = 8/227 (3%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
           M+QQN+N  EGV+VL+  PFE +  G+GQYT K Y  QSK P+W+K FAPA AL +HEE+
Sbjct: 19  MEQQNTNSKEGVEVLQQVPFEDEKLGKGQYTSKNYHLQSKIPSWMKGFAPASALTVHEES 78

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEV 120
           W +YP  +TV        ++CP F+K SLTI+TV + DNG S+N HNL+ EQLAAR+VEV
Sbjct: 79  WCAYPNSRTV--------IKCPLFSKCSLTIDTVIRPDNGCSENAHNLTSEQLAAREVEV 130

Query: 121 LDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYW 180
           +DIA  +RDYWS  I++ NVD + F+S+RT RGPL +GW D C PVMT YKLV +DAP W
Sbjct: 131 VDIALQSRDYWSKVISAPNVDLTAFRSQRTSRGPLLKGWMDSCRPVMTTYKLVIMDAPIW 190

Query: 181 GFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQS 227
           G G RLE  ++AGERALFL  HR CF WIDEW+GMT+ QIRE+E+Q+
Sbjct: 191 GLGERLEDCIIAGERALFLACHRLCFAWIDEWYGMTLDQIREMERQT 237

Source: Oryza sativa Indica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222624710|gb|EEE58842.1| hypothetical protein OsJ_10423 [Oryza sativa Japonica Group]

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 134/227 (59%), Positives = 170/227 (74%), Gaps = 8/227 (3%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
           M+QQN+N  EGV+VL+  PFE +  G+GQYT K Y  QSK P+W+K FAPA AL +HEE+
Sbjct: 1   MEQQNTNSKEGVEVLQQVPFEDEKLGKGQYTSKNYHLQSKIPSWMKGFAPASALTVHEES 60

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEV 120
           W +YP  +TV        ++CP F+K SLTI+TV + DNG S+N HNL+ EQLAAR+VEV
Sbjct: 61  WCAYPNSRTV--------IKCPLFSKCSLTIDTVIRPDNGCSENAHNLTSEQLAAREVEV 112

Query: 121 LDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYW 180
           +DIA  +RDYWS  I++ NVD + F+S+RT RGPL +GW D C PVMT YKLV +DAP W
Sbjct: 113 VDIALQSRDYWSKVISAPNVDLTAFRSQRTSRGPLLKGWMDSCRPVMTTYKLVIMDAPIW 172

Query: 181 GFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQS 227
           G G RLE  ++AGERALFL  HR CF WIDEW+GMT+ QIRE+E+Q+
Sbjct: 173 GLGERLEDCIIAGERALFLACHRLCFAWIDEWYGMTLDQIREMERQT 219

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|326491239|dbj|BAK05719.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 133/233 (57%), Positives = 171/233 (73%), Gaps = 8/233 (3%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
           M+QQN+NG EGV+VL+  PFE +  G+GQ+T KVY  QSK P W+K FA A AL +HE++
Sbjct: 29  MEQQNTNGKEGVEVLQQVPFEDEELGKGQFTSKVYNLQSKIPTWMKGFASASALAVHEDS 88

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEV 120
           W++YP+ +TV        ++CP F+K SLTI+TV + DNG S+N HNL+ +QLAAR+VEV
Sbjct: 89  WSAYPKSRTV--------IKCPLFSKCSLTIDTVIRPDNGCSENAHNLNSQQLAAREVEV 140

Query: 121 LDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYW 180
           +DIAS +RDYWS  I +  VD + FKS+RT RGPL +GW + C PVMT YKLV  DAP W
Sbjct: 141 VDIASVSRDYWSKVITAPKVDLTTFKSQRTDRGPLLDGWMNSCRPVMTIYKLVITDAPIW 200

Query: 181 GFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
           G G RLE  L+ GERALFL  HR CF WIDEW+GMTM+QIRE+E+ +   L +
Sbjct: 201 GLGERLEDCLITGERALFLSCHRLCFAWIDEWYGMTMEQIREMERHTDLHLKK 253

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357112754|ref|XP_003558172.1| PREDICTED: phosphatidylinositol transfer protein 1-like [Brachypodium distachyon]

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 130/227 (57%), Positives = 168/227 (74%), Gaps = 8/227 (3%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
           M+QQN+NG EGV+VL+  PFE +  G GQ T KVY  QSK P+W+K FA   AL +HE++
Sbjct: 29  MEQQNTNGKEGVEVLQQAPFEDEELGEGQLTSKVYHLQSKIPSWMKGFASTSALAVHEDS 88

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEV 120
           W +YP+ +TV        ++CP F+K SLTI+TV + DNG SDN HNL+ +QLAAR+VE+
Sbjct: 89  WCAYPKSRTV--------IKCPLFSKCSLTIDTVIRPDNGCSDNAHNLTSQQLAAREVEI 140

Query: 121 LDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYW 180
           +DIAS +RDYWS  I +  VD + FKS+ T RGPL +GW D C+PVMT YKLVT+DAP W
Sbjct: 141 IDIASVSRDYWSKVITAPKVDLTTFKSQLTNRGPLLKGWMDSCHPVMTTYKLVTMDAPIW 200

Query: 181 GFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQS 227
           G G RLE  ++AGERALFL  HR CF W+DEW GMTM+QIR++E+ +
Sbjct: 201 GLGERLEDCIIAGERALFLACHRLCFAWVDEWHGMTMEQIRDMERHN 247

Source: Brachypodium distachyon

Species: Brachypodium distachyon

Genus: Brachypodium

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297746204|emb|CBI16260.3| unnamed protein product [Vitis vinifera]

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 118/153 (77%), Positives = 137/153 (89%), Gaps = 1/153 (0%)

Query: 80  QCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNN 139
            CPYF KF L I+TVHKADNG+S+NVH L+++QLAARQVEV+DIAS ARDYWSY +  N+
Sbjct: 51  HCPYFNKFCLAIDTVHKADNGQSENVHGLNKKQLAARQVEVIDIASAARDYWSYVVGGNS 110

Query: 140 VDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFL 199
           VDFSKF+S +TGRGPL EGWQ  C+PVMTAYKLVT+DAPYWGFG RLEQA LAGERALFL
Sbjct: 111 VDFSKFRSAKTGRGPLLEGWQS-CDPVMTAYKLVTVDAPYWGFGNRLEQAFLAGERALFL 169

Query: 200 ESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLN 232
           ESHRNCFGWIDEWFGMT+QQ+RE+E+Q+ SSL+
Sbjct: 170 ESHRNCFGWIDEWFGMTVQQLRELEEQTNSSLD 202

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	233
DICTYBASE|DDB_G0290069	264	pitA "Phosphatidylinositol tra	0.935	0.825	0.401	1e-43
WB|WBGene00021854	270	Y54F10AR.1 [Caenorhabditis ele	0.948	0.818	0.433	1.3e-43
FB|FBgn0262468	272	vib "vibrator" [Drosophila mel	0.944	0.808	0.405	5.7e-43
ZFIN|ZDB-GENE-040426-744	271	pitpnaa "phosphatidylinositol	0.948	0.815	0.383	9.6e-41
ZFIN|ZDB-GENE-110408-51	273	pitpnab "phosphatidylinositol	0.935	0.798	0.393	1.4e-39
MGI|MGI:99887	271	Pitpna "phosphatidylinositol t	0.948	0.815	0.396	1.8e-39
RGD|61885	271	Pitpna "phosphatidylinositol t	0.948	0.815	0.396	2.3e-39
UNIPROTKB|F1Q139	267	PITPNA "Uncharacterized protei	0.948	0.827	0.402	2.9e-39
UNIPROTKB|F1N8I3	271	LOC100859747 "Uncharacterized	0.939	0.808	0.390	4.8e-39
UNIPROTKB|Q00169	270	PITPNA "Phosphatidylinositol t	0.944	0.814	0.396	4.8e-39

DICTYBASE|DDB_G0290069 pitA "Phosphatidylinositol transfer protein alpha isoform" [Dictyostelium discoideum (taxid:44689)]

 Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
 Identities = 94/234 (40%), Positives = 141/234 (60%)

Query:     3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
             Q+ SNG EGV+VL N P++      GQYT K+Y   S+ P W++   P+ AL + E+AWN
Sbjct:    31 QETSNG-EGVEVLVNEPYKEPEH-EGQYTHKIYHLGSRLPGWIRALIPSSALKLEEKAWN 88

Query:    63 SYPRCKTVSNTFIDLFLQCPYF-TKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
             +YP CKTV        L+ P+   KF+  IE+ H  DN +++N+HNLSE++L  R VEV+
Sbjct:    89 AYPYCKTV--------LKSPFLGEKFTFIIESRHAQDNCKTENIHNLSEKELKERTVEVI 140

Query:   122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEG-WQDRCN-PVMTAYKLVTIDAPY 179
             DI    +D  +Y       D +K +S++  RGPL E  W++    P+MT YKLVT++  Y
Sbjct:   141 DITKPIKDPKNY---KETEDPTKIRSEKANRGPLEEEKWRESTEMPIMTCYKLVTVEFKY 197

Query:   180 WGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
             +GF  ++E  ++  E  LF + HR  + W+DEWFGM+M  +R  E ++   L +
Sbjct:   198 FGFQTKVENFMMGIEFDLFTKFHRQVYCWLDEWFGMSMDDVRAFELKTKEDLKK 251

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008289 "lipid binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0044351 "macropinocytosis" evidence=RCA

WB|WBGene00021854 Y54F10AR.1 [Caenorhabditis elegans (taxid:6239)]

 Score = 460 (167.0 bits), Expect = 1.3e-43, P = 1.3e-43
 Identities = 101/233 (43%), Positives = 141/233 (60%)

Query:     6 SNGDEGVDVLENRPFEH-----DVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
             + G EGV+VL+N PF++       F +GQYT K+Y  QSK PA L+  AP  +L +HEEA
Sbjct:    33 TGGGEGVEVLKNEPFDNVPLLNGQFTKGQYTHKIYHLQSKVPAILRKIAPKGSLAIHEEA 92

Query:    61 WNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEV 120
             WN+YP CKTV  T  D +++  ++ K    IET+H  DNG ++N H L  ++LA R+V  
Sbjct:    93 WNAYPYCKTVV-TNPD-YMKENFYVK----IETIHLPDNGTTENAHGLKGDELAKREVVN 146

Query:   121 LDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYW 180
             ++IA+   +Y +      +   SKF+S +TGRGPLS  W+D   PVM AYKLVT+   ++
Sbjct:   147 INIAND-HEYLNSGDLHPDSTPSKFQSTKTGRGPLSGNWKDSVQPVMCAYKLVTVYFKWF 205

Query:   181 GFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
             GF   +E         LF + HR  F WID+W G+TM  IREIE ++   L E
Sbjct:   206 GFQKIVENYAHTQYPRLFSKFHREVFCWIDKWHGLTMVDIREIEAKAQKELEE 258

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0006915 "apoptotic process" evidence=IMP

FB|FBgn0262468 vib "vibrator" [Drosophila melanogaster (taxid:7227)]

 Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
 Identities = 97/239 (40%), Positives = 141/239 (58%)

Query:     3 QQNSNGDEGVDVLENRPFEH-----DVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMH 57
             ++N+ G EG++VL+N PFE        +  GQYT+K+Y  QSK PA+++  AP  +L +H
Sbjct:    30 KENTGGGEGIEVLKNEPFEDFPLLGGKYNSGQYTYKIYHLQSKVPAYIRLLAPKGSLEIH 89

Query:    58 EEAWNSYPRCKTVSNTFIDLFLQCPYFTK--FSLTIETVHKADNGRSDNVHNLSEEQLAA 115
             EEAWN+YP C+T+           P F K  F + I+T+H  D G S+NVH L+ ++L  
Sbjct:    90 EEAWNAYPYCRTIITN--------PKFMKDAFKIIIDTLHVGDAGDSENVHELTPDKLKV 141

Query:   116 RQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPL-SEGWQDRCNPVMTAYKLVT 174
             R+V  +DIA+   D    A    + D + ++SK+TGRGPL    W+   NPVMT YKLVT
Sbjct:   142 REVVHIDIAN---DPVLPADYKPDEDPTTYQSKKTGRGPLVGSDWKKHVNPVMTCYKLVT 198

Query:   175 IDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
              +  ++G   R+E  +   ER LF   HR  F   D W+G+TM+ IR IE Q+   L++
Sbjct:   199 CEFKWFGLQTRVENFIQKSERRLFTNFHRQVFCSTDRWYGLTMEDIRAIEDQTKEELDK 257

GO:0001700 "embryonic development via the syncytial blastoderm" evidence=IMP

GO:0035091 "phosphatidylinositol binding" evidence=ISS

GO:0005548 "phospholipid transporter activity" evidence=ISS;NAS

GO:0006810 "transport" evidence=IEA

GO:0007111 "cytokinesis after meiosis II" evidence=IMP

GO:0043147 "meiotic spindle stabilization" evidence=IMP

GO:0007110 "cytokinesis after meiosis I" evidence=IMP

GO:0000916 "actomyosin contractile ring contraction" evidence=IMP

GO:0032154 "cleavage furrow" evidence=IDA

GO:0000915 "cytokinesis, actomyosin contractile ring assembly" evidence=IMP

GO:0070732 "spindle envelope" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0031965 "nuclear membrane" evidence=IDA

GO:0031566 "actomyosin contractile ring maintenance" evidence=IMP

GO:0016006 "Nebenkern" evidence=IDA

GO:0033206 "cytokinesis after meiosis" evidence=IMP

GO:0007112 "male meiosis cytokinesis" evidence=IMP

GO:0048137 "spermatocyte division" evidence=IMP

ZFIN|ZDB-GENE-040426-744 pitpnaa "phosphatidylinositol transfer protein, alpha a" [Danio rerio (taxid:7955)]

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 91/237 (38%), Positives = 140/237 (59%)

Query:     3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
             +  + G +GV+VL+N P+E +   +GQYT K+YR QSK P++++  AP+ AL++HE+AWN
Sbjct:    30 KNETGGGDGVEVLKNEPYEKEDGEKGQYTHKIYRLQSKVPSFVRLLAPSSALIIHEKAWN 89

Query:    63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
             +YP C+TV +N ++           F + IET HK D G  +NVHNL  E+   +QVEV+
Sbjct:    90 AYPYCRTVLTNEYMK--------DNFLIMIETWHKPDLGEQENVHNLDSERW--KQVEVI 139

Query:   122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW-----QDRCNPVMTAYKLVTID 176
              I    R          + D + FKS++TGRGPL   W     Q +  P M AYKLVT++
Sbjct:   140 HIDIADRSQVDTKDYKPDEDPATFKSQKTGRGPLGPDWKKELPQKKDCPHMCAYKLVTVN 199

Query:   177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
               ++G   ++E  +   E+ LF   HR  F W+D W  +TM+ IR +E+++   L++
Sbjct:   200 FKWFGLQKKVEGFIHRQEKRLFTSFHRQLFCWLDRWIDLTMEDIRRMEEETQKELDK 256

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003674 "molecular_function" evidence=ND

GO:0007409 "axonogenesis" evidence=IMP

GO:0009790 "embryo development" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

ZFIN|ZDB-GENE-110408-51 pitpnab "phosphatidylinositol transfer protein, alpha b" [Danio rerio (taxid:7955)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 94/239 (39%), Positives = 135/239 (56%)

Query:     3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
             +  + G EGV+VL+N P+E D   +GQYT K+Y  QSK P++++  APA AL +HE+AWN
Sbjct:    33 KNETGGGEGVEVLKNEPYEKDG-EKGQYTHKIYHLQSKVPSFVRMLAPASALNIHEKAWN 91

Query:    63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
             +YP C+TV +N ++           F + IET HK D G+ DNVH L  +      V  +
Sbjct:    92 AYPYCRTVITNEYMK--------ENFLIKIETWHKPDMGQQDNVHGLDPDTWKKVDVVYI 143

Query:   122 DIASTAR-DYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDR------CNPVMTAYKLVT 174
             DIA  ++ +   Y       D SK+KS +TGRGPL   W+        C P M AYKLVT
Sbjct:   144 DIADRSQVEPKDY---KPEEDPSKYKSVKTGRGPLGPDWKRELPKKTDC-PHMCAYKLVT 199

Query:   175 IDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
             +   +WG   ++E  +   E+ LF   HR  F WID+W  + M  IR +E+++   L+E
Sbjct:   200 VKFKWWGLQNKVENFIQKQEKRLFTNFHRQLFCWIDKWIELNMDDIRRMEEETRKELDE 258

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

MGI|MGI:99887 Pitpna "phosphatidylinositol transfer protein, alpha" [Mus musculus (taxid:10090)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 94/237 (39%), Positives = 131/237 (55%)

Query:     3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
             +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct:    31 KNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 90

Query:    63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
             +YP C+TV +N ++           F + IET HK D G  +NVH L  E  A + VE +
Sbjct:    91 AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPE--AWKHVEAI 140

Query:   122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW-QDRCN----PVMTAYKLVTID 176
              I    R            D +KFKS +TGRGPL   W Q+  N    P M AYKLVT+ 
Sbjct:   141 YIDIADRSQVLSKDYKAEEDPAKFKSVKTGRGPLGPNWKQELVNQKDCPYMCAYKLVTVK 200

Query:   177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
               +WG   ++E  +   E+ LF   HR  F W+D+W  +TM  IR +E+++   L+E
Sbjct:   201 FKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDE 257

GO:0000062 "fatty-acyl-CoA binding" evidence=ISO

GO:0005543 "phospholipid binding" evidence=ISO

GO:0005622 "intracellular" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0008289 "lipid binding" evidence=ISS

GO:0008526 "phosphatidylinositol transporter activity" evidence=ISO

GO:0015914 "phospholipid transport" evidence=ISO

GO:0016021 "integral to membrane" evidence=ISS

GO:0035091 "phosphatidylinositol binding" evidence=ISO

GO:0070540 "stearic acid binding" evidence=ISO

RGD|61885 Pitpna "phosphatidylinositol transfer protein, alpha" [Rattus norvegicus (taxid:10116)]

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 94/237 (39%), Positives = 131/237 (55%)

Query:     3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
             +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct:    31 KNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 90

Query:    63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
             +YP C+TV +N ++           F + IET HK D G  +NVH L  E  A + VE +
Sbjct:    91 AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPE--AWKHVEAI 140

Query:   122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW-QDRCN----PVMTAYKLVTID 176
              I    R            D +KFKS +TGRGPL   W Q+  N    P M AYKLVT+ 
Sbjct:   141 YIDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDCPYMCAYKLVTVK 200

Query:   177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
               +WG   ++E  +   E+ LF   HR  F W+D+W  +TM  IR +E+++   L+E
Sbjct:   201 FKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDE 257

GO:0000062 "fatty-acyl-CoA binding" evidence=IDA

GO:0005543 "phospholipid binding" evidence=IDA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008526 "phosphatidylinositol transporter activity" evidence=IDA;TAS

GO:0015914 "phospholipid transport" evidence=IMP;IDA

GO:0035091 "phosphatidylinositol binding" evidence=IDA

GO:0070540 "stearic acid binding" evidence=IDA

UNIPROTKB|F1Q139 PITPNA "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 95/236 (40%), Positives = 132/236 (55%)

Query:     3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
             +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct:    28 KNETGGGEGVEVLVNEPYEKDG-EKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 86

Query:    63 SYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLD 122
             +YP C+TV   F + +++      F + IET HK D G  +NVH L  E  A + VE + 
Sbjct:    87 AYPYCRTV---FQNEYMK----EDFLIKIETWHKPDLGTQENVHKLEPE--AWKHVEAIY 137

Query:   123 IASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW-QDRCN----PVMTAYKLVTIDA 177
             I    R            D +KFKS +TGRGPL   W Q+  N    P M AYKLVT+  
Sbjct:   138 IDIADRSQVLSKDYKAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDCPYMCAYKLVTVKF 197

Query:   178 PYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
              +WG   ++E  +   ER LF   HR  F W+D+W  +TM  IR +E+++   L+E
Sbjct:   198 KWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDE 253

GO:0006810 "transport" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1N8I3 LOC100859747 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 93/238 (39%), Positives = 133/238 (55%)

Query:     3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
             +  + G EGV+VL N P+E D   RGQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct:    31 KNETGGGEGVEVLVNEPYERDG-ERGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 89

Query:    63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
             +YP C+TV +N ++           F + IET HK+D G  +NVH L  +     +   +
Sbjct:    90 AYPYCRTVITNEYMK--------DDFLIKIETWHKSDLGTQENVHTLEPDVWKNVEAIYI 141

Query:   122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYKLVTI 175
             DIA  ++       A    D +KFKS +TGRGPL   W      Q  C P M AYKLVT+
Sbjct:   142 DIADRSQVLPKDYKAEE--DPAKFKSVKTGRGPLGPNWKKELGKQSDC-PYMCAYKLVTV 198

Query:   176 DAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
                +WG   ++E  +   E+ LF   HR  F W+D+W  +TM+ IR +E+++   L+E
Sbjct:   199 KFKWWGLQNKIENFIQKQEKRLFTNFHRQLFCWLDKWVDLTMEDIRRMEEETKRQLDE 256

GO:0005622 "intracellular" evidence=IEA

GO:0006810 "transport" evidence=IEA

UNIPROTKB|Q00169 PITPNA "Phosphatidylinositol transfer protein alpha isoform" [Homo sapiens (taxid:9606)]

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 94/237 (39%), Positives = 132/237 (55%)

Query:     3 QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
             +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct:    31 KNETGGGEGVEVLVNEPYEKDG-EKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 89

Query:    63 SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
             +YP C+TV +N ++           F + IET HK D G  +NVH L  E     +   +
Sbjct:    90 AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAVYI 141

Query:   122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW-QDRCN----PVMTAYKLVTID 176
             DIA  ++       A    D +KFKS +TGRGPL   W Q+  N    P M AYKLVT+ 
Sbjct:   142 DIADRSQVLSKDYKAEE--DPAKFKSIKTGRGPLGPNWKQELVNQKDCPYMCAYKLVTVK 199

Query:   177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
               +WG   ++E  +   ER LF   HR  F W+D+W  +TM  IR +E+++   L+E
Sbjct:   200 FKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDE 256

GO:0000062 "fatty-acyl-CoA binding" evidence=IEA

GO:0035091 "phosphatidylinositol binding" evidence=IEA

GO:0070540 "stearic acid binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0008525 "phosphatidylcholine transporter activity" evidence=TAS

GO:0006629 "lipid metabolic process" evidence=NAS

GO:0007601 "visual perception" evidence=TAS

GO:0008526 "phosphatidylinositol transporter activity" evidence=TAS

GO:0007411 "axon guidance" evidence=TAS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9NCL8	PITP1_DICDI	No assigned EC number	0.4050	0.9227	0.8143	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: Sb01g038660.1 hypothetical protein (283 aa) (Sorghum bicolor)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	233
cd07815	251	cd07815, SRPBCC_PITP, Lipid-binding SRPBCC domain	1e-113
cd08888	258	cd08888, SRPBCC_PITPNA-B_like, Lipid-binding SRPBC	2e-75
pfam02121	254	pfam02121, IP_trans, Phosphatidylinositol transfer	1e-68
cd08889	260	cd08889, SRPBCC_PITPNM1-2_like, Lipid-binding SRPB	6e-60
cd08890	250	cd08890, SRPBCC_PITPNC1_like, Lipid-binding SRPBCC	1e-55

>gnl|CDD|176857 cd07815, SRPBCC_PITP, Lipid-binding SRPBCC domain of Class I and Class II Phosphatidylinositol Transfer Proteins

 Score =  324 bits (833), Expect = e-113
 Identities = 109/236 (46%), Positives = 150/236 (63%), Gaps = 17/236 (7%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
             ++ +   EGV+VL+N P+E +  G+GQYT K+Y   SK P+WL+  AP  AL + E++
Sbjct: 27  ASKEETGSGEGVEVLKNEPYEDENGGKGQYTHKIYHLGSKLPSWLRALAPKSALTIEEKS 86

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEV 120
           WN+YP CKTV          CP+F KFS++IE++HK D G  +N HNLS EQLA R+V V
Sbjct: 87  WNAYPYCKTV--------YSCPFFEKFSISIESMHKPDLGTQENAHNLSAEQLAQRKVVV 138

Query: 121 LDIASTA---RDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDA 177
           +DIA+ +   +DY          D   FKSK+TGRGPL +GW+    P+M AYKLVT+D 
Sbjct: 139 IDIANDSVASKDYKPE------EDPKLFKSKKTGRGPLRKGWRKSTKPIMCAYKLVTVDF 192

Query: 178 PYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
           PYWG   ++E  +   ER +FL  HR  F WIDEWF +TM+ IRE E+++   L+ 
Sbjct: 193 PYWGLQNKVENFIQKVERDVFLNYHRQAFCWIDEWFDLTMEDIREFEEETKELLDA 248

This family includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of the phosphatidylinositol transfer protein (PITP) family of lipid transfer proteins. This family of proteins includes Class 1 PITPs (PITPNA/PITPalpha and PITPNB/PITPbeta, Drosophila vibrator and related proteins), Class IIA PITPs (PITPNM1/PITPalphaI/Nir2, PITPNM2/PITPalphaII/Nir3, Drosophila RdgB, and related proteins), and Class IIB PITPs (PITPNC1/RdgBbeta and related proteins). The PITP family belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns metabolism, and membrane trafficking. Class III PITPs, exemplified by the Sec14p family, are found in yeast and plants but are unrelated in sequence and structure to Class I and II PITPs and belong to a different superfamily. Length = 251

>gnl|CDD|176897 cd08888, SRPBCC_PITPNA-B_like, Lipid-binding SRPBCC domain of mammalian PITPNA, -B, and related proteins (Class I PITPs)

 Score =  228 bits (583), Expect = 2e-75
 Identities = 92/241 (38%), Positives = 138/241 (57%), Gaps = 24/241 (9%)

Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EG++VL N P+E D   +GQYT K+Y  QSK P +++  AP  +L +HE+AWN
Sbjct: 29  KNETGGGEGIEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPGFVRMLAPEGSLEIHEKAWN 88

Query: 63  SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+T+ +N ++           F + IET HK D G  +NVHNL  E+    +V  +
Sbjct: 89  AYPYCRTIITNEYMK--------EDFLIIIETWHKPDLGTQENVHNLDPEEWKEVEVVYI 140

Query: 122 DIA----STARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQ-----DRCNPVMTAYKL 172
           DIA       +DY        + D +KF+S++TGRGPL   W+      +  P+M AYKL
Sbjct: 141 DIADRSQVDPKDY------KADEDPAKFQSEKTGRGPLGPNWKKELVNQKDCPIMCAYKL 194

Query: 173 VTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLN 232
           VT++  +WG   ++E  +   ER LF   HR  F W+D+W G+TM  IR +E ++   L+
Sbjct: 195 VTVEFKWWGLQNKVENFIQKQERRLFTNFHRQVFCWLDKWHGLTMDDIRRMEDETKKELD 254

Query: 233 E 233
           E
Sbjct: 255 E 255

This subgroup includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of mammalian Class 1 phosphatidylinositol transfer proteins (PITPs), PITPNA/PITPalpha and PITPNB/PITPbeta, Drosophila vibrator, and related proteins. These are single domain proteins belonging to the PITP family of lipid transfer proteins, and to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns metabolism, and membrane trafficking. In addition, PITPNB transfers sphingomyelin in vitro, with a low affinity. PITPNA is found chiefly in the nucleus and cytoplasm; it is enriched in the brain and predominantly localized in the axons. A reduced expression of PITPNA contributes to the neurodegenerative phenotype of the mouse vibrator mutation. The role of PITPNA in vivo may be to provide PtdIns for localized PI3K-dependent signaling, thereby controlling the polarized extension of axonal processes. PITPNA homozygous null mice die soon after birth from complicated organ failure, including intestinal and hepatic steatosis, hypoglycemia, and spinocerebellar disease. PITPNB is associated with the Golgi and ER, and is highly expressed in the liver. Deletion of the PITPNB gene results in embryonic lethality. The PtdIns and PtdCho exchange activity of PITPNB is required for COPI-mediated retrograde transport from the Golgi to the ER. Drosophila vibrator localizes to the ER, and has an essential role in cytokinesis during mitosis and meiosis. Length = 258

>gnl|CDD|111058 pfam02121, IP_trans, Phosphatidylinositol transfer protein

 Score =  210 bits (537), Expect = 1e-68
 Identities = 87/236 (36%), Positives = 123/236 (52%), Gaps = 17/236 (7%)

Query: 2   QQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAW 61
           + ++     GV++L N P+E    G+GQYT K+Y   SK PAW++T  P  AL +HEEAW
Sbjct: 30  RNESHGEGSGVEILSNEPYEDGPGGKGQYTHKIYHLGSKVPAWIRTLLPEGALEVHEEAW 89

Query: 62  NSYPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           N+YP  +T            PY   FS+ IET +K D G  +NV NLS +    R ++ +
Sbjct: 90  NAYPYTRTR--------YTNPYMEDFSIKIETWYKPDLGTQENVFNLSPKDWKTRIIDYI 141

Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW-----QDRCNPVMTAYKLVTID 176
           DI    RD  S        D   F S +TGRGPL   W     +    P+M AYKL T++
Sbjct: 142 DI---VRDQVSSGDYKAEEDPKLFHSVKTGRGPLGPDWKAELVKTGDCPLMCAYKLCTVE 198

Query: 177 APYWGFGYRLEQALL-AGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
             YWG   ++E  +     R     +HR  + W DEW G+TM+ IR +E+++   L
Sbjct: 199 FRYWGMQTKVENFIHDQALRRTMTRAHRQAWCWQDEWTGLTMEDIRRLEEETQLHL 254

Along with the structurally unrelated Sec14p family (found in pfam00650), this family can bind/exchange one molecule of phosphatidylinositol (PI) or phosphatidylcholine (PC) and thus aids their transfer between different membrane compartments. There are three sub-families - all share an N-terminal PITP-like domain, whose sequence is highly conserved. It is described as consisting of three regions. The N-terminal region is thought to bind the lipid and contains two helices and an eight-stranded, mostly antiparallel beta-sheet. An intervening loop region, which is thought to play a role in protein-protein interactions, separates this from the C-terminal region, which exhibits the greatest sequence variation and may be involved in membrane binding. PITP alpha has a 16-fold greater affinity for PI than PC. Together with PITP beta, it is expressed ubiquitously in all tissues. Length = 254

>gnl|CDD|176898 cd08889, SRPBCC_PITPNM1-2_like, Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)

 Score =  189 bits (481), Expect = 6e-60
 Identities = 85/233 (36%), Positives = 123/233 (52%), Gaps = 24/233 (10%)

Query: 9   DEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCK 68
             GV++LENRP+     G GQYT K+Y   S  P W +   P  AL + EEAWN+YP  +
Sbjct: 37  GSGVEILENRPYTDGPGGSGQYTHKIYHIGSHIPGWFRAILPKSALRVEEEAWNAYPYTR 96

Query: 69  TVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDI---AS 125
           T           CP+  KFSL IET +  D G  +NV NLS  +L  R ++ +DI     
Sbjct: 97  TR--------YTCPFVEKFSLDIETYYFDDAGEQENVFNLSPAELRQRIIDFIDIVKDPV 148

Query: 126 TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYKLVTIDAPY 179
              DY          D   + S++TGRGPLS+ W           P+M AYKL  ++  Y
Sbjct: 149 PGSDY------KAEEDPKLYVSEKTGRGPLSDDWIEEYKDPPGKGPIMCAYKLCKVEFRY 202

Query: 180 WGFGYRLEQALLA-GERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
           WG   ++E+ +     R + L +HR  + W DEW+G+TM+ IR++E+++  +L
Sbjct: 203 WGMQTKIERFIHDVALRKVMLRAHRQAWCWQDEWYGLTMEDIRKLEEETQLAL 255

This subgroup includes an N-terminal SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of mammalian Class II phosphatidylinositol transfer protein (PITPs), PITPNM1/PITPalphaI/Nir2 (PYK2 N-terminal domain-interacting receptor2) and PITPNM2/PITPalphaII/Nir3), Drosophila RdgB, and related proteins. These are membrane associated multidomain proteins belonging to the PITP family of lipid transfer proteins, and to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns metabolism, and membrane trafficking. Ablation of the mouse gene encoding PITPNM1 results in early embryonic death. PITPNM1 is localized chiefly to the Golgi apparatus, and under certain conditions translocates to the lipid droplets. Targeting to the latter is dependent on a specific threonine residue within the SRPBCC domain. PITPNM1 plays a part in Golgi-mediated transport. It regulates diacylglycerol (DAG) production at the trans-Golgi network (TGN) via the CDP-choline pathway. Drosophila RdgB, the founding member of the PITP family, is implicated in the visual and olfactory transduction. RdgB is required for maintenance of ultra structure in photoreceptors and for sensory transduction. The mouse PITPNM1 gene rescues the phenotype of Drosophila rdgB mutant flies. In addition to the SRPBCC domain, PITPNM1 and -2 contain a Rho-inhibitory domain (Rid), six hydrophobic stretches, a DDHD calcium binding region, and a C-terminal tyrosine kinase Pyk2-binding / HAD-like phosphohydrolase domain. PITPNM1 has a role in regulating cell morphogenesis through its Rho inhibitory domain (Rid). This SRPBCC_PITPNM1-2_like domain model includes the first 52 residues of the 224 residues Rid (Rho-inhibitory domain). Length = 260

>gnl|CDD|176899 cd08890, SRPBCC_PITPNC1_like, Lipid-binding SRPBCC domain of mammalian PITPNC1,and related proteins (Class IIB PITPs)

 Score =  178 bits (452), Expect = 1e-55
 Identities = 88/230 (38%), Positives = 121/230 (52%), Gaps = 12/230 (5%)

Query: 4   QNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNS 63
           + S   EGV+V++N P E    G GQ+T K     S+ P+W +   P    V  E+AWN 
Sbjct: 30  EQSERGEGVEVVQNEPCEDPEHGNGQFTEKRVYLNSRLPSWARAVVPKIFYVT-EKAWNY 88

Query: 64  YPRCKTVSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDI 123
           YP   T           C +  KFS+ IET ++ + G+S+N   LSE +L+ R+V  LDI
Sbjct: 89  YPYTITE--------YTCSFLPKFSIHIETKYEDNKGKSENCIFLSEAELSEREVCHLDI 140

Query: 124 ASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCNPVMTAYKLVTIDAPYWGFG 183
           A    D           D   FKS++TGRGPL EGW++   P+M +YKLVT+    WG  
Sbjct: 141 AY---DEIPEKYYKEEEDPKYFKSEKTGRGPLKEGWRETHKPIMCSYKLVTVKFEVWGLQ 197

Query: 184 YRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE 233
            R+EQ +    R + L  HR  F W+DEW+ MTM  +RE E+      NE
Sbjct: 198 TRVEQFVHKVVRDILLLGHRQAFAWVDEWYDMTMDDVREYERTIQEKTNE 247

This subgroup includes the N-terminal SRPBCC (START/RHO_alpha_C /PITP /Bet_v1/CoxG/CalC) domain of mammalian Class IIB phosphatidylinositol transfer protein (PITP), PITPNC1/RdgBbeta, and related proteins. These are metazoan proteins belonging to the PITP family of lipid transfer proteins, and to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns metabolism, and membrane trafficking. Mammalian PITPNC1 contains an amino-terminal SRPBCC PITP-like domain and a short carboxyl-terminal domain. It is a cytoplasmic protein, and is ubiquitously expressed. It can transfer phosphatidylinositol (PtdIns) in vitro with a similar ability to other PITPs. Length = 250

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	233
cd08888	258	SRPBCC_PITPNA-B_like Lipid-binding SRPBCC domain o	100.0
cd08890	250	SRPBCC_PITPNC1_like Lipid-binding SRPBCC domain of	100.0
cd07815	251	SRPBCC_PITP Lipid-binding SRPBCC domain of Class I	100.0
cd08889	260	SRPBCC_PITPNM1-2_like Lipid-binding SRPBCC domain	100.0
PF02121	254	IP_trans: Phosphatidylinositol transfer protein; I	100.0
KOG3668	269	consensus Phosphatidylinositol transfer protein [L	100.0
PF04707	157	PRELI: PRELI-like family; InterPro: IPR006797 Thes	94.85

>cd08888 SRPBCC_PITPNA-B_like Lipid-binding SRPBCC domain of mammalian PITPNA, -B, and related proteins (Class I PITPs)

Probab=100.00  E-value=1.6e-110  Score=746.44  Aligned_cols=222  Identities=41%  Similarity=0.782  Sum_probs=217.3

Q ss_pred             CCccccCCCccEEEEEceecCCCCCCceeEEEEEEEecCCchhHHHhhcCCCceeEEeeeeecCceeeEEeccccccccc
Q 048074            1 MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQ   80 (233)
Q Consensus         1 ~S~~et~~GeGVEvl~NEp~~~~~~g~GqYT~K~y~l~sklP~w~~~~~Pk~~l~v~E~aWNaYPy~~T~~~~~~~~~~t   80 (233)
                      +|+++||||||||||+||||+++++|+||||||||||+||||+|||+++|++||+|+|+||||||||+|+|        +
T Consensus        27 ~S~eet~~GeGVEvl~Nepy~~~~~~~GqYT~Kiyhl~sklP~wir~~~P~~al~v~EkaWNaYPy~~T~y--------t   98 (258)
T cd08888          27 ASKNETGGGEGIEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPGFVRMLAPEGSLEIHEKAWNAYPYCRTII--------T   98 (258)
T ss_pred             hhHhhcCCCccEEEEeccccccCCCCcceeEEEEEEccccchhHHHHhCCCcceEEehhhhcCCCceEEEE--------e
Confidence            68999999999999999999999989999999999999999999999999999999999999999999999        9


Q ss_pred             cCCcc-ceEEEEEeEEeCCCCCCcCcCCCCHhhhcceeeEEeeccCCc-CCccccccCCCccCCCcceecccCCCCCCcc
Q 048074           81 CPYFT-KFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTA-RDYWSYAIASNNVDFSKFKSKRTGRGPLSEG  158 (233)
Q Consensus        81 ~~~~~-kF~i~IET~~~~d~g~~eNv~~L~~~~l~~ReV~~iDIa~d~-~~~~~~~~y~~~eDp~~f~S~ktgRGPL~~~  158 (233)
                      ||||+ +|+|.|||+|.+|+|++|||||||+++|++|+|++||||+|+ +++   ++|+++|||++|+|+|||||||.+|
T Consensus        99 ~~~~k~~F~i~IET~h~~d~g~~eNv~~L~~e~L~~ReV~~IDIa~d~~~~~---~dYk~eeDP~~f~S~kTgRGPL~~~  175 (258)
T cd08888          99 NEYMKEDFLIIIETWHKPDLGTQENVHNLDPEEWKEVEVVYIDIADRSQVDP---KDYKADEDPAKFQSEKTGRGPLGPN  175 (258)
T ss_pred             cCCcCccEEEEEEEEEcCCCCCccccccCCHHHHhCcEEEEEecccCCcCCc---ccCCcccCcccccccccCCCCCCcc
Confidence            99994 699999999999999999999999999999999999999999 488   9999999999999999999999999


Q ss_pred             cccc-----CCceEEEEeEEEEecccccchhHHHHHHHhhhhHHHHHhhhhheeecccccCCCHHHHHHHHHHhhhhhcC
Q 048074          159 WQDR-----CNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE  233 (233)
Q Consensus       159 W~~~-----~~piM~~YKlv~v~f~~wGlq~~vE~~I~~~~r~i~~~~HRq~fcw~DeW~~lTmedIR~~E~e~~~~L~~  233 (233)
                      |+++     +.|||||||||+|+|+|||||+|||+|||+++|++|+++||||||||||||||||+|||+||++||++|++
T Consensus       176 W~~~~~~~~~~PiMcaYKLv~v~f~~wG~q~rvE~fI~~~~r~~fl~~HRq~fcW~DeW~gltmedIR~~E~~t~~~l~~  255 (258)
T cd08888         176 WKKELVNQKDCPIMCAYKLVTVEFKWWGLQNKVENFIQKQERRLFTNFHRQVFCWLDKWHGLTMDDIRRMEDETKKELDE  255 (258)
T ss_pred             hhhhcccCCCCCEEEEeEEEEEEEeeecccHHHHHHHHHHHHHHHHHHHHHHhhhHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence            9998     67999999999999999999999999999999999999999999999999999999999999999999974

This subgroup includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of mammalian Class 1 phosphatidylinositol transfer proteins (PITPs), PITPNA/PITPalpha and PITPNB/PITPbeta, Drosophila vibrator, and related proteins. These are single domain proteins belonging to the PITP family of lipid transfer proteins, and to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns metabolism, and membrane trafficking. In addition, PITPNB transfers sphingomyelin in vitro, with a low affinity. PITPNA is found chiefly in the nucleus and cy

>cd08890 SRPBCC_PITPNC1_like Lipid-binding SRPBCC domain of mammalian PITPNC1,and related proteins (Class IIB PITPs)

Probab=100.00  E-value=3.1e-110  Score=741.84  Aligned_cols=221  Identities=39%  Similarity=0.686  Sum_probs=218.1

Q ss_pred             CCccccCCCccEEEEEceecCCCCCCceeEEEEEEEecCCchhHHHhhcCCCceeEEeeeeecCceeeEEeccccccccc
Q 048074            1 MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQ   80 (233)
Q Consensus         1 ~S~~et~~GeGVEvl~NEp~~~~~~g~GqYT~K~y~l~sklP~w~~~~~Pk~~l~v~E~aWNaYPy~~T~~~~~~~~~~t   80 (233)
                      +|+++||||||||||+||||+++++|+||||||||||+||||+|+|+++|++ |+|+|+||||||||+|+|        +
T Consensus        27 ~S~eet~~geGVEvl~Nep~~~~~~~~GqYT~K~~hl~sklP~w~r~~~P~~-l~v~EkaWNaYPy~~T~y--------~   97 (250)
T cd08890          27 HSHEQSERGEGVEVVQNEPCEDPEHGNGQFTEKRVYLNSRLPSWARAVVPKI-FYVTEKAWNYYPYTITEY--------T   97 (250)
T ss_pred             hhHhhcCCCccEEEEeccccccCCCCccceeEEEEEccccChhHHHHhCCcc-eEEehhhhccCCceeeee--------c
Confidence            6899999999999999999999999999999999999999999999999987 999999999999999999        9


Q ss_pred             cCCccceEEEEEeEEeCCCCCCcCcCCCCHhhhcceeeEEeeccCCcCCccccccCCCccCCCcceecccCCCCCCcccc
Q 048074           81 CPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQ  160 (233)
Q Consensus        81 ~~~~~kF~i~IET~~~~d~g~~eNv~~L~~~~l~~ReV~~iDIa~d~~~~~~~~~y~~~eDp~~f~S~ktgRGPL~~~W~  160 (233)
                      ||||++|+|+|||+|.+|+|++|||||||+++|++|+|++||||+|++++   ++|+++|||++|+|+|||||||.+||+
T Consensus        98 ~~~~~kf~i~IET~h~~d~g~~eN~~~L~~~~L~~ReV~~IDIa~d~v~~---~dYk~eeDp~~f~S~kTgRGPL~~~W~  174 (250)
T cd08890          98 CSFLPKFSIHIETKYEDNKGKSENCIFLSEAELSEREVCHLDIAYDEIPE---KYYKEEEDPKYFKSEKTGRGPLKEGWR  174 (250)
T ss_pred             cCCcCcEEEEEEEEEcCCCCCccccccCCHHHhcCceEEEEecccCCCCc---ccCCcccCCccccccccCCCCCCcccc
Confidence            99999999999999999999999999999999999999999999999999   999999999999999999999999999


Q ss_pred             ccCCceEEEEeEEEEecccccchhHHHHHHHhhhhHHHHHhhhhheeecccccCCCHHHHHHHHHHhhhhhcC
Q 048074          161 DRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE  233 (233)
Q Consensus       161 ~~~~piM~~YKlv~v~f~~wGlq~~vE~~I~~~~r~i~~~~HRq~fcw~DeW~~lTmedIR~~E~e~~~~L~~  233 (233)
                      +++.|||||||||+|+|+|||||+|||+|||+++|++|+++||||||||||||||||+|||+||+++|++|++
T Consensus       175 ~~~~PiMcaYKLv~v~f~~wG~q~rvE~~I~~~~r~~~l~~HRq~fcW~DeW~gltmedIR~~E~e~~~~l~~  247 (250)
T cd08890         175 ETHKPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLLGHRQAFAWVDEWYDMTMDDVREYERTIQEKTNE  247 (250)
T ss_pred             cCCCceEEEEEEEEEEEeeecccHHHHHHHHHHHHHHHHHHHHHHheeHHHHcCCCHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999974

This subgroup includes the N-terminal SRPBCC (START/RHO_alpha_C /PITP /Bet_v1/CoxG/CalC) domain of mammalian Class IIB phosphatidylinositol transfer protein (PITP), PITPNC1/RdgBbeta, and related proteins. These are metazoan proteins belonging to the PITP family of lipid transfer proteins, and to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns metabolism, and membrane trafficking. Mammalian PITPNC1 contains an amino-terminal SRPBCC PITP-like domain and a short carboxyl-terminal domain. It is a cytoplasmic protein, and is ubiquitously

>cd07815 SRPBCC_PITP Lipid-binding SRPBCC domain of Class I and Class II Phosphatidylinositol Transfer Proteins

Probab=100.00  E-value=2.9e-110  Score=743.25  Aligned_cols=222  Identities=48%  Similarity=0.914  Sum_probs=219.4

Q ss_pred             CCccccCCCccEEEEEceecCCCCCCceeEEEEEEEecCCchhHHHhhcCCCceeEEeeeeecCceeeEEeccccccccc
Q 048074            1 MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQ   80 (233)
Q Consensus         1 ~S~~et~~GeGVEvl~NEp~~~~~~g~GqYT~K~y~l~sklP~w~~~~~Pk~~l~v~E~aWNaYPy~~T~~~~~~~~~~t   80 (233)
                      +|+++||||||||||+||||+++++|+||||||||||+||||+|||+++|++||+|+|+||||||||+|+|        +
T Consensus        27 ~S~eet~~GeGVEvl~Nepy~~~~~~~GqYT~Kiyhl~sklP~w~~~~~P~~al~v~EkaWNaYPy~~T~y--------~   98 (251)
T cd07815          27 ASKEETGSGEGVEVLKNEPYEDENGGKGQYTHKIYHLGSKLPSWLRALAPKSALTIEEKSWNAYPYCKTVY--------S   98 (251)
T ss_pred             hhHhhcCCCccEEEEeccCcccCCCCcceeEEEEEEccccchhHHHHhCCccceEEEhhhhCCCCceeEEE--------e
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999        9


Q ss_pred             cCCccceEEEEEeEEeCCCCCCcCcCCCCHhhhcceeeEEeeccCCcCCccccccCCCccCCCcceecccCCCCCCcccc
Q 048074           81 CPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQ  160 (233)
Q Consensus        81 ~~~~~kF~i~IET~~~~d~g~~eNv~~L~~~~l~~ReV~~iDIa~d~~~~~~~~~y~~~eDp~~f~S~ktgRGPL~~~W~  160 (233)
                      ||||++|+|+|||+|.+|+|++|||||||+++|++|+|++||||+|++++   ++|+++|||++|+|+|||||||.+||+
T Consensus        99 ~~~~~kf~i~IET~h~~d~g~~eNv~~L~~~~L~~ReV~~IDIa~d~~~~---~dYk~eeDp~~f~S~kTgRGPL~~~W~  175 (251)
T cd07815          99 CPFFEKFSISIESMHKPDLGTQENAHNLSAEQLAQRKVVVIDIANDSVAS---KDYKPEEDPKLFKSKKTGRGPLRKGWR  175 (251)
T ss_pred             cCCCCcEEEEEEEEEcCCCCCcccccCCCHHHHhCcEEEEEeccCCCCCc---ccCCcccCCchhcccccCCCCCCcccc
Confidence            99999999999999999999999999999999999999999999999999   999999999999999999999999999


Q ss_pred             ccCCceEEEEeEEEEecccccchhHHHHHHHhhhhHHHHHhhhhheeecccccCCCHHHHHHHHHHhhhhhcC
Q 048074          161 DRCNPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE  233 (233)
Q Consensus       161 ~~~~piM~~YKlv~v~f~~wGlq~~vE~~I~~~~r~i~~~~HRq~fcw~DeW~~lTmedIR~~E~e~~~~L~~  233 (233)
                      +++.|+|||||||+|+|+|||||+|||+|||+++|++|+++||||||||||||||||+|||+||++||++|++
T Consensus       176 ~~~~PiMcaYKLv~v~f~~wG~q~rvE~~I~~~~r~~~l~~HRq~fcW~DeW~gltmedIR~~E~e~~~~L~~  248 (251)
T cd07815         176 KSTKPIMCAYKLVTVDFPYWGLQNKVENFIQKVERDVFLNYHRQAFCWIDEWFDLTMEDIREFEEETKELLDA  248 (251)
T ss_pred             ccCCCeEEEEEEEEEEeeeecccHHHHHHHHHHHHHHHHHHHHHHHhhHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999974

This family includes the SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of the phosphatidylinositol transfer protein (PITP) family of lipid transfer proteins. This family of proteins includes Class 1 PITPs (PITPNA/PITPalpha and PITPNB/PITPbeta, Drosophila vibrator and related proteins), Class IIA PITPs (PITPNM1/PITPalphaI/Nir2, PITPNM2/PITPalphaII/Nir3, Drosophila RdgB, and related proteins), and Class IIB PITPs (PITPNC1/RdgBbeta and related proteins). The PITP family belongs to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns

>cd08889 SRPBCC_PITPNM1-2_like Lipid-binding SRPBCC domain of mammalian PITPNM1-2 and related proteins (Class IIA PITPs)

Probab=100.00  E-value=4e-110  Score=744.56  Aligned_cols=222  Identities=38%  Similarity=0.741  Sum_probs=217.8

Q ss_pred             CCcccc-CCCccEEEEEceecCCCCCCceeEEEEEEEecCCchhHHHhhcCCCceeEEeeeeecCceeeEEecccccccc
Q 048074            1 MQQQNS-NGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFL   79 (233)
Q Consensus         1 ~S~~et-~~GeGVEvl~NEp~~~~~~g~GqYT~K~y~l~sklP~w~~~~~Pk~~l~v~E~aWNaYPy~~T~~~~~~~~~~   79 (233)
                      +|+++| |+|||||||+||||+++++|+||||||||||+||||+|||+++|++||+|+|+||||||||+|+|        
T Consensus        28 ~S~eet~g~GeGVEvl~Nepy~~~~~~~GqYT~Kiyhl~sklP~wl~~~~P~~al~v~EkaWNaYPy~~T~y--------   99 (260)
T cd08889          28 KSREESKGEGSGVEILENRPYTDGPGGSGQYTHKIYHIGSHIPGWFRAILPKSALRVEEEAWNAYPYTRTRY--------   99 (260)
T ss_pred             HhhhccCCCCceEEEEeccccccCCCCcceeEEEEEEccccChHHHHHhCCCcceEEehhHhCCCCceEEEE--------
Confidence            588999 99999999999999999999999999999999999999999999999999999999999999999        


Q ss_pred             ccCCccceEEEEEeEEeCCCCCCcCcCCCCHhhhcceeeEEeeccCCcCCccccccCCCccCCCcceecccCCCCCCccc
Q 048074           80 QCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW  159 (233)
Q Consensus        80 t~~~~~kF~i~IET~~~~d~g~~eNv~~L~~~~l~~ReV~~iDIa~d~~~~~~~~~y~~~eDp~~f~S~ktgRGPL~~~W  159 (233)
                      +||||++|+|.|||+|++|+|++|||||||+++|++|+|++||||+|++++   ++|+++|||++|+|+|||||||.+||
T Consensus       100 t~~~~~kF~i~IET~h~~d~g~~eNv~~L~~~~L~~ReV~~IDIa~d~v~~---~dYk~eeDP~~f~S~kTgRGPL~~~W  176 (260)
T cd08889         100 TCPFVEKFSLDIETYYFDDAGEQENVFNLSPAELRQRIIDFIDIVKDPVPG---SDYKAEEDPKLYVSEKTGRGPLSDDW  176 (260)
T ss_pred             ecCCccceEEEEEEEEcCCCCCccccccCCHHHhhCceEEEEeccCCCCCc---cccCcccCcchhcccccCCCCCChhh
Confidence            999999999999999999999999999999999999999999999999999   99999999999999999999999999


Q ss_pred             ccc------CCceEEEEeEEEEecccccchhHHHHHHHhhh-hHHHHHhhhhheeecccccCCCHHHHHHHHHHhhhhhc
Q 048074          160 QDR------CNPVMTAYKLVTIDAPYWGFGYRLEQALLAGE-RALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLN  232 (233)
Q Consensus       160 ~~~------~~piM~~YKlv~v~f~~wGlq~~vE~~I~~~~-r~i~~~~HRq~fcw~DeW~~lTmedIR~~E~e~~~~L~  232 (233)
                      +++      +.|||||||||+|+|+|||||+|||+|||++. |++|+++||||||||||||||||+|||+||++||++|+
T Consensus       177 ~~~~~~~~~~~PiMcaYKLv~v~f~~wG~q~rvE~fI~~~~lr~~~l~~HRq~fcW~DeW~gltmedIR~~E~etq~~L~  256 (260)
T cd08889         177 IEEYKDPPGKGPIMCAYKLCKVEFRYWGMQTKIERFIHDVALRKVMLRAHRQAWCWQDEWYGLTMEDIRKLEEETQLALA  256 (260)
T ss_pred             hhhhcccCCCCCeEEEeEEEEEEEeeecchHHHHHHHHHhhhHHHHHHHHHHHheeHHHHcCCCHHHHHHHHHHHHHHHH
Confidence            988      67999999999999999999999999999997 99999999999999999999999999999999999997


Q ss_pred             C
Q 048074          233 E  233 (233)
Q Consensus       233 ~  233 (233)
                      +
T Consensus       257 ~  257 (260)
T cd08889         257 Q  257 (260)
T ss_pred             h
Confidence            4

This subgroup includes an N-terminal SRPBCC (START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC) domain of mammalian Class II phosphatidylinositol transfer protein (PITPs), PITPNM1/PITPalphaI/Nir2 (PYK2 N-terminal domain-interacting receptor2) and PITPNM2/PITPalphaII/Nir3), Drosophila RdgB, and related proteins. These are membrane associated multidomain proteins belonging to the PITP family of lipid transfer proteins, and to the SRPBCC domain superfamily of proteins that bind hydrophobic ligands. SRPBCC domains have a deep hydrophobic ligand-binding pocket. In vitro, PITPs bind phosphatidylinositol (PtdIns), as well as phosphatidylcholine (PtdCho) but with a lower affinity. They transfer these lipids from one membrane compartment to another. The cellular roles of PITPs include inositol lipid signaling, PtdIns metabolism, and membrane trafficking. Ablation of the mouse gene en

>PF02121 IP_trans: Phosphatidylinositol transfer protein; InterPro: IPR001666 Phosphatidylinositol transfer protein (PITP) is a ubiquitous cytosolic protein, thought to be involved in transport of phospholipids from their site of synthesis in the endoplasmic reticulum and Golgi to other cell membranes []

Probab=100.00  E-value=7e-108  Score=730.98  Aligned_cols=220  Identities=47%  Similarity=0.886  Sum_probs=188.1

Q ss_pred             CCccccCC-CccEEEEEceecCCCCCCceeEEEEEEEecCCchhHHHhhcCCCceeEEeeeeecCceeeEEecccccccc
Q 048074            1 MQQQNSNG-DEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFL   79 (233)
Q Consensus         1 ~S~~et~~-GeGVEvl~NEp~~~~~~g~GqYT~K~y~l~sklP~w~~~~~Pk~~l~v~E~aWNaYPy~~T~~~~~~~~~~   79 (233)
                      +|+++|+| |||||||+||||+++++|+||||||||||+||||+|||+|+|++||+|+|+||||||||+|+|        
T Consensus        28 ~s~~et~g~GeGVEvl~Nep~~~~~g~~GqYT~K~y~l~sklP~~ir~l~P~~~l~v~E~aWNaYPy~~T~~--------   99 (254)
T PF02121_consen   28 ASKEETGGDGEGVEVLKNEPYEDEPGGKGQYTHKIYHLASKLPSWIRALLPKGALYVHEKAWNAYPYCKTVY--------   99 (254)
T ss_dssp             HHHCTSBT-TBEEEEEEEEEEE-TTS-EEEEEEEEEEETTTS-HHHHTTSTTTTTEEEEEEEEETTEEEEEE--------
T ss_pred             HhHhhccCCCcceEEEEecccccCCCCceeeEEEEEEecccChHHHHHhCCCceEEEEEEEecccceEEEEE--------
Confidence            48899999 999999999999999889999999999999999999999999999999999999999999999        


Q ss_pred             ccCCccceEEEEEeEEeCCCCCCcCcCCCCHhhhcceeeEEeeccCCcCCccccccCCCccCCCcceecccCCCCCCccc
Q 048074           80 QCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW  159 (233)
Q Consensus        80 t~~~~~kF~i~IET~~~~d~g~~eNv~~L~~~~l~~ReV~~iDIa~d~~~~~~~~~y~~~eDp~~f~S~ktgRGPL~~~W  159 (233)
                      +||||++|+|.|||+|.||+|++|||||||+++|++|+|++||||+|++++   ++|+++|||++|+|+|||||||.+||
T Consensus       100 t~~~~~kF~i~IET~~~~d~G~~eNv~~L~~~~lk~reV~~IDI~~d~i~~---~dyk~~eDp~~f~S~ktgRGPL~~~W  176 (254)
T PF02121_consen  100 TNPYMDKFSIKIETMHKPDNGTSENVFNLSPEELKKREVVFIDIANDPISP---KDYKEEEDPTKFKSKKTGRGPLKEDW  176 (254)
T ss_dssp             EETTTGGEEEEEEEEEESSSS--TTTT---HHHHTTSEEEEE-TTGGGS-C---CC--GGG-CCC---TTT------TTH
T ss_pred             ecCCCCceEEEEEEEEcCCCCCcCcccCCCHHHhcCceEEEEEecCCcccc---cccCcccCchheEecCCCCCCCCcch
Confidence            999998899999999999999999999999999999999999999999999   99999999999999999999999999


Q ss_pred             ccc-----CCceEEEEeEEEEecccccchhHHHHHHHhhh-hHHHHHhhhhheeecccccCCCHHHHHHHHHHhhhhh
Q 048074          160 QDR-----CNPVMTAYKLVTIDAPYWGFGYRLEQALLAGE-RALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL  231 (233)
Q Consensus       160 ~~~-----~~piM~~YKlv~v~f~~wGlq~~vE~~I~~~~-r~i~~~~HRq~fcw~DeW~~lTmedIR~~E~e~~~~L  231 (233)
                      +++     +.|+|||||||+|+|+|||||+|||+|||+++ |++|+++||||||||||||||||+|||+||++||++|
T Consensus       177 ~~~~~~~~~~PiMc~YKlv~v~f~~~GlQ~~vE~~I~~~~~r~i~~~~HRq~fcw~DeW~glTmedIR~~E~et~~~L  254 (254)
T PF02121_consen  177 RKEWKKNGKKPIMCCYKLVTVEFKWWGLQTKVENFIHKQILRRIFLNFHRQAFCWIDEWYGLTMEDIRELEEETQEEL  254 (254)
T ss_dssp             HHHHCTSSSS--EEEEEEEEEEE--TTTHHHHHHHHHHHH-HHHHHHHHHHHHHTHHHHTT--HHHHHHHHHHHHHHH
T ss_pred             hhhhhhcCCCCEEEEEEEEEEEeeeechHHHHHHHHHHhhhhHHHHHHHHHHheehhhhcCCCHHHHHHHHHHHHhcC
Confidence            987     48999999999999999999999999999998 9999999999999999999999999999999999987

More recently, PITP has been shown to be an essential component of the polyphosphoinositide synthesis machinery and is hence required for proper signalling by epidermal growth factor and f-Met-Leu-Phe, as well as for exocytosis. The role of PITP in polyphosphoinositide synthesis may also explain its involvement in intracellular vesicular traffic [].; GO: 0006810 transport, 0005622 intracellular; PDB: 1T27_A 1KCM_A 2A1L_A 1UW5_C.

>KOG3668 consensus Phosphatidylinositol transfer protein [Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-106  Score=714.52  Aligned_cols=221  Identities=41%  Similarity=0.745  Sum_probs=214.4

Q ss_pred             CCccccCCCccEEEEEceecCCCCCCceeEEEEEEEecCCchhHHHhhcCCCceeEEeeeeecCceeeEEeccccccccc
Q 048074            1 MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQ   80 (233)
Q Consensus         1 ~S~~et~~GeGVEvl~NEp~~~~~~g~GqYT~K~y~l~sklP~w~~~~~Pk~~l~v~E~aWNaYPy~~T~~~~~~~~~~t   80 (233)
                      +|+++|+||+|||||+||||+++++|+||||||||||+||+|+|+|+|+|++||+|||+||||||||+|+|        |
T Consensus        29 ~Sr~et~ggeGVEvl~nep~~dg~~g~GqyThKIyhl~sk~P~~~r~l~Pk~al~v~EesWNAYPy~rT~y--------T  100 (269)
T KOG3668|consen   29 KSREETGGGEGVEVLKNEPYTDGPGGSGQYTHKIYHLGSKVPAWLRSLLPKGALIVHEESWNAYPYTRTRY--------T  100 (269)
T ss_pred             hhhhccCCCcceEEEecCCCcCCCCCccceEEEEEEecccchHHHHHhCCccceEEeeecccccceEEEEE--------e
Confidence            68999999999999999999999999999999999999999999999999999999999999999999999        9


Q ss_pred             cC-CccceEEEEEeEEeCCCCCCcCcCCCCHhhhcceeeEEeeccCCcCCccccccCCCccCCCcceecccCCCCCCccc
Q 048074           81 CP-YFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW  159 (233)
Q Consensus        81 ~~-~~~kF~i~IET~~~~d~g~~eNv~~L~~~~l~~ReV~~iDIa~d~~~~~~~~~y~~~eDp~~f~S~ktgRGPL~~~W  159 (233)
                      |. +.++|+|.|||+|+||+|++||||+|++++|++|+|++||||+|++.+   .+|++++||++|+|+|||||||.++|
T Consensus       101 n~~~~d~F~i~IeT~~~~d~G~~eNvf~l~~~~~~~rei~~IDIa~d~v~~---~dyk~eeDP~~f~s~kTgRGpL~e~w  177 (269)
T KOG3668|consen  101 NYYMKDKFSIKIETIYLDDAGTQENVFGLDPEDLNQREIVFIDIADDPVPP---NDYKAEEDPKLFQSEKTGRGPLDENW  177 (269)
T ss_pred             cccccccceEEEEEEEcCCCCCCCCcccCChhhcceeEEEEEEeecCCCCc---cccCcccCchhheecccccCCCCcch
Confidence            94 445699999999999999999999999999999999999999999999   99999999999999999999999988


Q ss_pred             cccC----CceEEEEeEEEEecccccchhHHHHHHHhhhhHHHHHhhhhheeecccccCCCHHHHHHHHHHhhhhhc
Q 048074          160 QDRC----NPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLN  232 (233)
Q Consensus       160 ~~~~----~piM~~YKlv~v~f~~wGlq~~vE~~I~~~~r~i~~~~HRq~fcw~DeW~~lTmedIR~~E~e~~~~L~  232 (233)
                      .++.    .|+|||||||+|+|+|||||++||+|||+++|++|+++|||||||+|+||||||+|||++|++||.+|.
T Consensus       178 ~~~~~~~~~P~McaYKlvtvefk~wGmQ~~VE~fIhk~~~rv~~~~HRqafcw~D~W~gltm~diRe~E~~t~~~l~  254 (269)
T KOG3668|consen  178 WETYKSQGMPVMCAYKLVTVEFKWWGMQTKVENFIHKVERRVFTRAHRQAFCWQDEWYGLTMEDIRELEDETQLELI  254 (269)
T ss_pred             HHHhhccCCCeEEEeeEEEEEEEeehHHHHHHHHHHHHHHHHHHHHHHHHheehhhhhCccHHHHHHHHHHHHHHHH
Confidence            7765    299999999999999999999999999999999999999999999999999999999999999999986

>PF04707 PRELI: PRELI-like family; InterPro: IPR006797 These proteins contain a conserved region found in the yeast YLR168C gene MSF1 product

Probab=94.85  E-value=0.31  Score=40.76  Aligned_cols=49  Identities=24%  Similarity=0.355  Sum_probs=37.4

Q ss_pred             cEEEEEceecCCCCCCceeEEEEEEEecCCchhHHHhhcC-CCceeEEeeeeec
Q 048074           11 GVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAP-ADALVMHEEAWNS   63 (233)
Q Consensus        11 GVEvl~NEp~~~~~~g~GqYT~K~y~l~sklP~w~~~~~P-k~~l~v~E~aWNa   63 (233)
                      +|.||.-+  -++. |. -||++++.+...+|+|+++|++ ...+++.|+|+--
T Consensus        21 ~~Dvl~r~--vd~~-g~-l~t~Rl~~~~~~~P~w~~kl~g~~~~~~~~E~S~vD   70 (157)
T PF04707_consen   21 SVDVLDRE--VDPD-GK-LHTKRLITKKNNLPRWLKKLIGVDSECYIIEESIVD   70 (157)
T ss_pred             EEEEEEEE--EcCC-Cc-EEEeeeeeeecCchHHHHHHhCcCceEEEEEEEEEE
Confidence            34554433  2333 55 8999999999999999999999 6668899998763

The function of this protein is unknown, though it is thought to be involved in intra-mitochondrial protein sorting. GFP-tagged MSF1 localizes to mitochondria and is required for wild-type respiratory growth []. This region is also found in a number of other eukaryotic proteins. The PRELI/MSF1 domain is an eukaryotic protein module which occurs in stand-alone form in several proteins, including the human PRELI protein and the yeast MSF1 protein, and as an amino-terminal domain in an orthologous group of proteins typified by human SEC14L1, which is conserved in all animals. In this group of proteins, the PRELI/MSF1 domain co-occurs with the CRAL-TRIO (see PDOC50191 from PROSITEDOC) and the GOLD domains (see PDOC50866 from PROSITEDOC). The PRELI/MSF1 domain is approximately 170 residues long and is predicted to assume a globular alpha + beta fold with six beta strands and four alpha helices. It has been suggested that the PRELI/MSF1 domain may have a function associated with cellular membrane [].

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	233
1kcm_A	270	Crystal Structure Of Mouse Pitp Alpha Void Of Bound		3e-42
1t27_A	271	The Structure Of Pitp Complexed To Phosphatidylchol		4e-42
1uw5_A	270	Structure Of Pitp-Alpha Complexed To Phosphatidylin		3e-39
2a1l_A	270	Rat Pitp-Beta Complexed To Phosphatidylcholine Leng		6e-39

>pdb|1KCM|A Chain A, Crystal Structure Of Mouse Pitp Alpha Void Of Bound Phospholipid At 2.0 Angstroms Resolution Length = 270

Iteration: 1
 Score =  167 bits (424), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 132/242 (54%), Gaps = 26/242 (10%)
Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct: 30  KNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 89
Query: 63  SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+TV +N ++           F + IET HK D G  +NVH L  E     +   +
Sbjct: 90  AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAIYI 141
Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
           DIA      ++DY          D +KFKS +TGRGPL   W      Q  C P M AYK
Sbjct: 142 DIADRSQVLSKDY------KAEEDPAKFKSVKTGRGPLGPNWKQELVNQKDC-PYMCAYK 194
Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
           LVT+   +WG   ++E  +   E+ LF   HR  F W+D+W  +TM  IR +E+++   L
Sbjct: 195 LVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQL 254
Query: 232 NE 233
           +E
Sbjct: 255 DE 256

>pdb|1T27|A Chain A, The Structure Of Pitp Complexed To Phosphatidylcholine Length = 271

Iteration: 1
 Score =  167 bits (424), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 132/242 (54%), Gaps = 26/242 (10%)
Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct: 31  KNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWN 90
Query: 63  SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+TV +N ++           F + IET HK D G  +NVH L  E     +   +
Sbjct: 91  AYPYCRTVITNEYMK--------EDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAIYI 142
Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
           DIA      ++DY          D +KFKS +TGRGPL   W      Q  C P M AYK
Sbjct: 143 DIADRSQVLSKDY------KAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDC-PYMCAYK 195
Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
           LVT+   +WG   ++E  +   E+ LF   HR  F W+D+W  +TM  IR +E+++   L
Sbjct: 196 LVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQL 255
Query: 232 NE 233
           +E
Sbjct: 256 DE 257

>pdb|1UW5|A Chain A, Structure Of Pitp-Alpha Complexed To Phosphatidylinositol Length = 270

Iteration: 1
 Score =  158 bits (399), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/242 (38%), Positives = 128/242 (52%), Gaps = 27/242 (11%)
Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+AWN
Sbjct: 31  KNETGGGEGVEVLVNEPYEKD-GEKGQYTHKIYHLQSKVPTFVRXLAPEGALNIHEKAWN 89
Query: 63  SYPRCKTV-SNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+TV +N +            F + IET HK D G  +NVH L  E     +   +
Sbjct: 90  AYPYCRTVITNEYXK--------EDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAVYI 141
Query: 122 DIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGW------QDRCNPVMTAYK 171
           DIA      ++DY          D +KFKS +TGRGPL   W      Q  C P   AYK
Sbjct: 142 DIADRSQVLSKDY------KAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDC-PYXCAYK 194
Query: 172 LVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
           LVT+   +WG   ++E  +   ER LF   HR  F W+D+W  +T   IR  E+++   L
Sbjct: 195 LVTVKFKWWGLQNKVENFIHKQERRLFTNFHRQLFCWLDKWVDLTXDDIRRXEEETKRQL 254
Query: 232 NE 233
           +E
Sbjct: 255 DE 256

>pdb|2A1L|A Chain A, Rat Pitp-Beta Complexed To Phosphatidylcholine Length = 270

Iteration: 1
 Score =  157 bits (396), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 87/235 (37%), Positives = 129/235 (54%), Gaps = 17/235 (7%)
Query: 3   QQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWN 62
           +  + G EG++VL+N P+E+D   +GQYT K+Y  +SK PA+++  AP  +LV HE+AWN
Sbjct: 30  KNETGGGEGIEVLKNEPYEND-GEKGQYTHKIYHLKSKVPAFVRMIAPEGSLVFHEKAWN 88
Query: 63  SYPRCKT-VSNTFIDLFLQCPYFTKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVL 121
           +YP C+T V+N ++           F + IET HK D G  +NVH L        ++  +
Sbjct: 89  AYPYCRTIVTNEYMK--------DDFFIKIETWHKPDLGTLENVHGLDPNTWKTVEIVHI 140
Query: 122 DIASTARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRCN-----PVMTAYKLVTID 176
           DIA   R     A    + D + F+S +T RGPL   W+         P M AYKLVTI 
Sbjct: 141 DIAD--RSQVEPADYKADEDPALFQSVKTKRGPLGPNWKKELANTPDCPKMCAYKLVTIK 198
Query: 177 APYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSL 231
             +WG   ++E  +   E+ +F   HR  F WID+W  +TM+ IR +E ++   L
Sbjct: 199 FKWWGLQSKVENFIQKQEKRIFTNLHRQLFCWIDKWIDLTMEDIRRMEDETQKEL 253

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	233
1kcm_A	270	PITP alpha, phosphatidylinositol transfer protein	8e-89

>1kcm_A PITP alpha, phosphatidylinositol transfer protein alpha; phospholipid binding protein, phospholipid transport, binding protein; 2.00A {Mus musculus} SCOP: d.129.3.4 PDB: 1t27_A* 1uw5_A* 2a1l_A* Length = 270

 Score =  262 bits (671), Expect = 8e-89
 Identities = 92/243 (37%), Positives = 132/243 (54%), Gaps = 24/243 (9%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
             +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+A
Sbjct: 28  ASKNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKA 87

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYFTK-FSLTIETVHKADNGRSDNVHNLSEEQLAARQVE 119
           WN+YP C+TV        +   Y  + F + IET HK D G  +NVH L  E     +  
Sbjct: 88  WNAYPYCRTV--------ITNEYMKEDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAI 139

Query: 120 VLDIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQD-----RCNPVMTAY 170
            +DIA      ++DY +        D +KFKS +TGRGPL   W+      +  P M AY
Sbjct: 140 YIDIADRSQVLSKDYKA------EEDPAKFKSVKTGRGPLGPNWKQELVNQKDCPYMCAY 193

Query: 171 KLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSS 230
           KLVT+   +WG   ++E  +   E+ LF   HR  F W+D+W  +TM  IR +E+++   
Sbjct: 194 KLVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQ 253

Query: 231 LNE 233
           L+E
Sbjct: 254 LDE 256

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	233
1kcm_A	270	PITP alpha, phosphatidylinositol transfer protein	100.0

>1kcm_A PITP alpha, phosphatidylinositol transfer protein alpha; phospholipid binding protein, phospholipid transport, binding protein; 2.00A {Mus musculus} SCOP: d.129.3.4 PDB: 1t27_A* 1uw5_A* 2a1l_A*

Probab=100.00  E-value=2.4e-107  Score=730.25  Aligned_cols=222  Identities=41%  Similarity=0.734  Sum_probs=214.9

Q ss_pred             CCccccCCCccEEEEEceecCCCCCCceeEEEEEEEecCCchhHHHhhcCCCceeEEeeeeecCceeeEEeccccccccc
Q 048074            1 MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQ   80 (233)
Q Consensus         1 ~S~~et~~GeGVEvl~NEp~~~~~~g~GqYT~K~y~l~sklP~w~~~~~Pk~~l~v~E~aWNaYPy~~T~~~~~~~~~~t   80 (233)
                      +|+++||||||||||+||||+++.+++||||||||||+||||+|||+++|++||+|+|+||||||||+|+|        +
T Consensus        28 ~S~~etg~GeGVEvl~Nepy~~~~g~~GqYT~Kiyhl~sklP~wi~~~~P~~al~v~EkaWNayPy~~T~y--------t   99 (270)
T 1kcm_A           28 ASKNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVI--------T   99 (270)
T ss_dssp             HHTTCSSTTTTEEEEEEEEEECTTSCEEEEEEEEEECGGGSCHHHHTTSCTTTTEEEEEEEEETTEEEEEE--------E
T ss_pred             hhHhhcCCCceEEEEeccccccCCCCccceEEEEEEccccChHHHHHhCCccceEEEeehhccCcceeeEe--------c
Confidence            58999999999999999999998778999999999999999999999999999999999999999999999        9


Q ss_pred             cCCccc-eEEEEEeEEeCCCCCCcCcCCCCHhhhcceeeEEeeccCC-cCCccccccCCCccCCCcceecccCCCCCCcc
Q 048074           81 CPYFTK-FSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIAST-ARDYWSYAIASNNVDFSKFKSKRTGRGPLSEG  158 (233)
Q Consensus        81 ~~~~~k-F~i~IET~~~~d~g~~eNv~~L~~~~l~~ReV~~iDIa~d-~~~~~~~~~y~~~eDp~~f~S~ktgRGPL~~~  158 (233)
                      ||||++ |+|.|||+|.||+|++|||||||+++|++|+|++||||+| ++++   ++|+++|||++|+|+|||||||.+|
T Consensus       100 ~~~~~~kF~i~IET~h~~d~g~~eNv~~L~~~~l~~reV~~IDIa~~~~~~~---~dY~~eeDp~~f~S~ktgRGPL~~~  176 (270)
T 1kcm_A          100 NEYMKEDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAIYIDIADRSQVLS---KDYKAEEDPAKFKSVKTGRGPLGPN  176 (270)
T ss_dssp             ETTTGGGEEEEEEEEEESSSSCCSSTTCCCHHHHTTCEEEEECTTCGGGSCG---GGCCGGGCTTTCCCTTTCCCCCCTT
T ss_pred             CCCcCcceEEEEEEEEcCCCCCcccccCCChHHhcCceEEEEecccCccccc---ccCCcccCcchheecccCCCCCCcc
Confidence            999974 9999999999999999999999999999999999999986 5888   9999999999999999999999999


Q ss_pred             ccccC-----CceEEEEeEEEEecccccchhHHHHHHHhhhhHHHHHhhhhheeecccccCCCHHHHHHHHHHhhhhhcC
Q 048074          159 WQDRC-----NPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE  233 (233)
Q Consensus       159 W~~~~-----~piM~~YKlv~v~f~~wGlq~~vE~~I~~~~r~i~~~~HRq~fcw~DeW~~lTmedIR~~E~e~~~~L~~  233 (233)
                      |++++     .|+|||||||+|+|+|||||+|||+|||+++|++|+++||||||||||||||||+|||+||++||++|++
T Consensus       177 W~~~~~~~~~~PiMc~YKLv~v~f~~wGlq~rvE~fI~~~~r~i~~~~HRq~fcW~DeW~glTmedIR~~E~etq~~L~~  256 (270)
T 1kcm_A          177 WKQELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDE  256 (270)
T ss_dssp             HHHHHTTSTTCCCEEEEEEEEEEECCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHCCCC
T ss_pred             hhhhccccCCCceEEEEEEEEEEEeecCchHHHHHHHHHHHHHHHHHHHHHHhccHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence            98763     5999999999999999999999999999999999999999999999999999999999999999999974

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	233
d1t27a_	269	d.129.3.4 (A:) Phoshatidylinositol transfer protei	4e-98

>d1t27a_ d.129.3.4 (A:) Phoshatidylinositol transfer protein, PITP {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 269

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: Phoshatidylinositol transfer protein, PITP
domain: Phoshatidylinositol transfer protein, PITP
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  284 bits (729), Expect = 4e-98
 Identities = 92/243 (37%), Positives = 128/243 (52%), Gaps = 24/243 (9%)

Query: 1   MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEA 60
             +  + G EGV+VL N P+E D   +GQYT K+Y  QSK P +++  AP  AL +HE+A
Sbjct: 28  ASKNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKA 87

Query: 61  WNSYPRCKTVSNTFIDLFLQCPYF-TKFSLTIETVHKADNGRSDNVHNLSEEQLAARQVE 119
           WN+YP C+TV            Y    F + IET HK D G  +NVH L  E     +  
Sbjct: 88  WNAYPYCRTVIT--------NEYMKEDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAI 139

Query: 120 VLDIAS----TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEGWQDRC-----NPVMTAY 170
            +DIA      ++DY          D +KFKS +TGRGPL   W+         P M AY
Sbjct: 140 YIDIADRSQVLSKDY------KAEEDPAKFKSIKTGRGPLGPNWKQELVNQKDCPYMCAY 193

Query: 171 KLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSS 230
           KLVT+   +WG   ++E  +   E+ LF   HR  F W+D+W  +TM  IR +E+++   
Sbjct: 194 KLVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQ 253

Query: 231 LNE 233
           L+E
Sbjct: 254 LDE 256

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	233
d1t27a_	269	Phoshatidylinositol transfer protein, PITP {Rat (R	100.0

>d1t27a_ d.129.3.4 (A:) Phoshatidylinositol transfer protein, PITP {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: TBP-like
superfamily: Bet v1-like
family: Phoshatidylinositol transfer protein, PITP
domain: Phoshatidylinositol transfer protein, PITP
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.1e-108  Score=731.83  Aligned_cols=222  Identities=41%  Similarity=0.736  Sum_probs=216.2

Q ss_pred             CCccccCCCccEEEEEceecCCCCCCceeEEEEEEEecCCchhHHHhhcCCCceeEEeeeeecCceeeEEeccccccccc
Q 048074            1 MQQQNSNGDEGVDVLENRPFEHDVFGRGQYTFKVYRFQSKAPAWLKTFAPADALVMHEEAWNSYPRCKTVSNTFIDLFLQ   80 (233)
Q Consensus         1 ~S~~et~~GeGVEvl~NEp~~~~~~g~GqYT~K~y~l~sklP~w~~~~~Pk~~l~v~E~aWNaYPy~~T~~~~~~~~~~t   80 (233)
                      +|+++||||||||||+||||+++.+|+||||||||||+||||+|||+++|++||+|+|+||||||||+|+|        +
T Consensus        28 ~S~eet~ggeGVEvl~Nepy~~~~~~~GqyT~Kiyhl~sklP~wir~~~P~~al~v~EkaWNaYPy~~T~y--------t   99 (269)
T d1t27a_          28 ASKNETGGGEGVEVLVNEPYEKDDGEKGQYTHKIYHLQSKVPTFVRMLAPEGALNIHEKAWNAYPYCRTVI--------T   99 (269)
T ss_dssp             HHHHTCBTTBEEEEEEEEEEECTTCCEEEEEEEEEECTTTSCHHHHTTSCTTTTCEEEEEEEETTEEEEEE--------E
T ss_pred             hhhhhcCCCccEEEEEccCcccCCCCcceeEeeEEEhhhhChHHHHHhCCccccEEEEEeeccCceeEEee--------e
Confidence            48899999999999999999999999999999999999999999999999999999999999999999999        9


Q ss_pred             cCCccc-eEEEEEeEEeCCCCCCcCcCCCCHhhhcceeeEEeeccC-CcCCccccccCCCccCCCcceecccCCCCCCcc
Q 048074           81 CPYFTK-FSLTIETVHKADNGRSDNVHNLSEEQLAARQVEVLDIAS-TARDYWSYAIASNNVDFSKFKSKRTGRGPLSEG  158 (233)
Q Consensus        81 ~~~~~k-F~i~IET~~~~d~g~~eNv~~L~~~~l~~ReV~~iDIa~-d~~~~~~~~~y~~~eDp~~f~S~ktgRGPL~~~  158 (233)
                      ||||++ |+|.|||+|.+|+|++|||||||+++|++|+|++||||+ |++++   ++|+++|||++|+|+|||||||.+|
T Consensus       100 ~~~~~~~F~i~IET~h~~d~g~~eNv~~L~~e~l~~ReV~~IDIa~~d~v~~---~dY~~eeDp~~f~S~kTgRGPL~~~  176 (269)
T d1t27a_         100 NEYMKEDFLIKIETWHKPDLGTQENVHKLEPEAWKHVEAIYIDIADRSQVLS---KDYKAEEDPAKFKSIKTGRGPLGPN  176 (269)
T ss_dssp             CTTTGGGEEEEEEEEEESSCSCCTTTTCCCTTGGGGCEEEEECTTCGGGSCT---TTCCGGGCTTTCCCTTTCCCCCCTT
T ss_pred             cCCcccceEEEEEEEEcCCCCCcccccCCCHHHhcceEEEEecccccCcCCc---ccCCcccCcCeeeeeecCCCCCCCc
Confidence            999987 999999999999999999999999999999999999996 99999   9999999999999999999999999


Q ss_pred             ccccC-----CceEEEEeEEEEecccccchhHHHHHHHhhhhHHHHHhhhhheeecccccCCCHHHHHHHHHHhhhhhcC
Q 048074          159 WQDRC-----NPVMTAYKLVTIDAPYWGFGYRLEQALLAGERALFLESHRNCFGWIDEWFGMTMQQIREIEQQSGSSLNE  233 (233)
Q Consensus       159 W~~~~-----~piM~~YKlv~v~f~~wGlq~~vE~~I~~~~r~i~~~~HRq~fcw~DeW~~lTmedIR~~E~e~~~~L~~  233 (233)
                      |++++     .|+|||||||+|+|+|||||+|||+|||+++|++|+++||||||||||||||||+|||+||+++|++|++
T Consensus       177 W~~~~~~~~~~piMcaYKlv~v~f~~wGlq~rvE~~I~~~~r~~~l~~HRq~fcW~DeW~gmTmedIR~~E~e~q~~L~~  256 (269)
T d1t27a_         177 WKQELVNQKDCPYMCAYKLVTVKFKWWGLQNKVENFIHKQEKRLFTNFHRQLFCWLDKWVDLTMDDIRRMEEETKRQLDE  256 (269)
T ss_dssp             HHHHHTTCSSSCCEEEEEEEEEEECCTTTHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             chhhhccCCCCCEEEEEEEEEEEeeeecchHHHHHHHHHHHHHHHHHHHHHHheeHHHHcCCCHHHHHHHHHHHHHHHHH
Confidence            98643     4999999999999999999999999999999999999999999999999999999999999999999963